# TARGET T0166 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0166.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 341 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 V 0.004 0.003 0.022 0.339 0.129 0.503 2 T 0.004 0.003 0.023 0.654 0.069 0.247 3 D 0.003 0.003 0.014 0.874 0.028 0.078 4 I 0.001 0.001 0.007 0.976 0.006 0.009 5 L 0.001 0.001 0.004 0.981 0.007 0.007 6 R 0.001 0.001 0.002 0.986 0.006 0.005 7 E 0.001 0.001 0.002 0.987 0.005 0.005 8 I 0.001 0.001 0.001 0.990 0.003 0.005 9 G 0.001 0.001 0.001 0.985 0.005 0.009 10 M 0.001 0.001 0.001 0.992 0.004 0.004 11 I 0.001 0.001 0.001 0.988 0.005 0.006 12 A 0.001 0.001 0.001 0.984 0.006 0.009 13 R 0.001 0.001 0.001 0.968 0.012 0.018 14 A 0.001 0.001 0.002 0.977 0.011 0.010 15 L 0.001 0.001 0.003 0.967 0.014 0.014 16 D 0.001 0.001 0.008 0.931 0.029 0.031 17 S 0.001 0.001 0.006 0.935 0.031 0.027 18 I 0.001 0.001 0.004 0.930 0.025 0.039 19 S 0.001 0.001 0.003 0.924 0.023 0.047 20 N 0.002 0.001 0.007 0.891 0.042 0.058 21 I 0.001 0.001 0.008 0.916 0.040 0.034 22 E 0.001 0.001 0.011 0.929 0.039 0.020 23 F 0.001 0.001 0.020 0.903 0.049 0.026 24 K 0.002 0.001 0.063 0.793 0.100 0.042 25 E 0.002 0.001 0.123 0.707 0.119 0.048 26 L 0.004 0.001 0.073 0.510 0.210 0.203 27 S 0.002 0.002 0.006 0.010 0.150 0.830 28 L 0.007 0.008 0.001 0.003 0.094 0.887 29 T 0.009 0.009 0.001 0.009 0.147 0.826 30 R 0.002 0.001 0.015 0.864 0.088 0.030 31 G 0.002 0.001 0.013 0.938 0.038 0.007 32 Q 0.002 0.001 0.005 0.986 0.006 0.001 33 Y 0.001 0.001 0.001 0.996 0.001 0.001 34 L 0.001 0.001 0.001 0.998 0.001 0.001 35 Y 0.001 0.001 0.001 0.998 0.001 0.001 36 L 0.001 0.001 0.001 0.998 0.001 0.001 37 V 0.001 0.001 0.001 0.998 0.001 0.001 38 R 0.001 0.001 0.001 0.996 0.001 0.001 39 V 0.001 0.001 0.002 0.990 0.004 0.003 40 C 0.007 0.001 0.005 0.962 0.013 0.013 41 E 0.007 0.004 0.007 0.893 0.047 0.042 42 N 0.010 0.015 0.025 0.324 0.506 0.121 43 P 0.003 0.001 0.007 0.014 0.720 0.255 44 G 0.006 0.002 0.013 0.006 0.793 0.180 45 I 0.081 0.075 0.005 0.004 0.595 0.240 46 I 0.130 0.096 0.002 0.010 0.120 0.642 47 Q 0.013 0.001 0.028 0.876 0.058 0.023 48 E 0.001 0.001 0.017 0.952 0.028 0.003 49 K 0.002 0.001 0.008 0.968 0.020 0.002 50 I 0.002 0.001 0.005 0.970 0.019 0.003 51 A 0.002 0.001 0.004 0.973 0.016 0.005 52 E 0.002 0.001 0.013 0.957 0.023 0.005 53 L 0.001 0.001 0.015 0.949 0.023 0.011 54 I 0.001 0.001 0.011 0.845 0.045 0.097 55 K 0.001 0.001 0.002 0.022 0.078 0.895 56 V 0.006 0.006 0.002 0.007 0.113 0.866 57 D 0.018 0.016 0.004 0.012 0.198 0.752 58 R 0.006 0.004 0.116 0.515 0.240 0.119 59 T 0.004 0.002 0.138 0.714 0.095 0.047 60 T 0.001 0.001 0.082 0.887 0.024 0.005 61 A 0.001 0.001 0.010 0.978 0.006 0.006 62 A 0.001 0.001 0.002 0.996 0.001 0.001 63 R 0.001 0.001 0.001 0.998 0.001 0.001 64 A 0.001 0.001 0.001 0.998 0.001 0.001 65 I 0.001 0.001 0.001 0.999 0.001 0.001 66 K 0.001 0.001 0.001 0.998 0.001 0.001 67 R 0.001 0.001 0.001 0.995 0.003 0.001 68 L 0.001 0.001 0.002 0.989 0.006 0.001 69 E 0.001 0.001 0.005 0.983 0.009 0.002 70 E 0.002 0.001 0.005 0.959 0.020 0.014 71 Q 0.006 0.001 0.008 0.746 0.072 0.167 72 G 0.007 0.001 0.001 0.008 0.091 0.893 73 F 0.188 0.008 0.001 0.004 0.101 0.698 74 I 0.794 0.011 0.001 0.002 0.046 0.146 75 Y 0.903 0.007 0.002 0.001 0.026 0.061 76 R 0.926 0.004 0.002 0.001 0.014 0.054 77 Q 0.836 0.008 0.004 0.001 0.038 0.113 78 E 0.585 0.030 0.002 0.001 0.080 0.302 79 D 0.159 0.012 0.002 0.002 0.322 0.503 80 A 0.011 0.002 0.207 0.101 0.617 0.061 81 S 0.010 0.002 0.183 0.094 0.661 0.050 82 N 0.029 0.006 0.194 0.074 0.638 0.060 83 K 0.095 0.005 0.042 0.098 0.342 0.418 84 K 0.455 0.023 0.021 0.060 0.178 0.263 85 I 0.773 0.012 0.013 0.023 0.084 0.095 86 K 0.864 0.002 0.004 0.009 0.050 0.071 87 R 0.900 0.005 0.003 0.010 0.032 0.050 88 I 0.910 0.002 0.001 0.008 0.022 0.057 89 Y 0.860 0.004 0.001 0.008 0.034 0.093 90 A 0.700 0.022 0.001 0.007 0.036 0.234 91 T 0.101 0.007 0.001 0.022 0.137 0.731 92 E 0.003 0.001 0.023 0.762 0.140 0.072 93 K 0.001 0.001 0.028 0.856 0.102 0.013 94 G 0.001 0.001 0.015 0.941 0.038 0.004 95 K 0.001 0.001 0.005 0.973 0.014 0.006 96 N 0.001 0.001 0.007 0.974 0.012 0.005 97 V 0.002 0.001 0.009 0.974 0.009 0.005 98 Y 0.002 0.001 0.018 0.951 0.016 0.011 99 P 0.003 0.001 0.024 0.936 0.021 0.015 100 I 0.001 0.001 0.018 0.945 0.016 0.019 101 I 0.002 0.001 0.010 0.907 0.026 0.055 102 V 0.002 0.001 0.009 0.870 0.043 0.074 103 R 0.001 0.001 0.007 0.920 0.034 0.038 104 E 0.001 0.001 0.008 0.920 0.033 0.037 105 N 0.001 0.001 0.006 0.923 0.028 0.041 106 Q 0.001 0.001 0.003 0.959 0.015 0.023 107 H 0.001 0.001 0.003 0.974 0.011 0.012 108 S 0.001 0.001 0.003 0.980 0.008 0.009 109 N 0.001 0.001 0.003 0.981 0.007 0.008 110 Q 0.001 0.001 0.005 0.973 0.013 0.009 111 V 0.001 0.001 0.007 0.964 0.016 0.012 112 A 0.001 0.001 0.013 0.935 0.028 0.021 113 L 0.002 0.002 0.062 0.837 0.065 0.032 114 Q 0.002 0.001 0.108 0.676 0.142 0.073 115 G 0.004 0.001 0.088 0.331 0.254 0.323 116 L 0.003 0.009 0.009 0.055 0.226 0.698 117 S 0.001 0.002 0.002 0.039 0.095 0.862 118 E 0.001 0.001 0.011 0.938 0.030 0.021 119 V 0.001 0.001 0.010 0.959 0.024 0.006 120 E 0.001 0.001 0.010 0.973 0.011 0.005 121 I 0.001 0.001 0.002 0.992 0.002 0.003 122 S 0.001 0.001 0.001 0.993 0.003 0.002 123 Q 0.001 0.001 0.002 0.993 0.003 0.002 124 L 0.001 0.001 0.001 0.994 0.002 0.003 125 A 0.001 0.001 0.001 0.999 0.001 0.001 126 D 0.001 0.001 0.001 0.997 0.001 0.002 127 Y 0.001 0.001 0.001 0.997 0.001 0.002 128 L 0.001 0.001 0.001 0.998 0.001 0.001 129 V 0.001 0.001 0.001 0.996 0.002 0.001 130 R 0.001 0.001 0.001 0.996 0.002 0.001 131 M 0.001 0.001 0.001 0.991 0.005 0.002 132 R 0.001 0.001 0.004 0.985 0.008 0.003 133 K 0.001 0.001 0.006 0.925 0.039 0.029 134 N 0.001 0.001 0.009 0.769 0.084 0.136 135 V 0.005 0.011 0.023 0.665 0.144 0.153 136 S 0.007 0.009 0.058 0.463 0.267 0.196 137 E 0.006 0.002 0.094 0.422 0.265 0.212 138 D 0.010 0.005 0.101 0.376 0.263 0.245 139 W 0.019 0.007 0.076 0.415 0.267 0.215 140 E 0.033 0.009 0.056 0.522 0.190 0.190 141 F 0.058 0.025 0.052 0.471 0.170 0.224 142 V 0.059 0.046 0.043 0.336 0.299 0.217 143 K 0.039 0.014 0.025 0.179 0.561 0.181 144 K 0.015 0.005 0.021 0.090 0.655 0.214 145 G 0.018 0.009 0.010 0.017 0.647 0.299 146 N 0.076 0.039 0.014 0.015 0.487 0.369 147 T 0.108 0.069 0.030 0.025 0.296 0.473 148 R 0.062 0.045 0.033 0.027 0.244 0.590 149 N 0.028 0.020 0.017 0.024 0.155 0.757 150 Y 0.001 0.003 0.001 0.003 0.026 0.967