PFRMAT SS
TARGET T0166
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0166.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 341
METHOD
MODEL 1
V C 0.995
T H 0.641
D H 0.714
I H 0.912
L H 0.970
R H 0.986
E H 0.993
I H 0.996
G H 0.994
M H 0.993
I H 0.991
A H 0.988
R H 0.977
A H 0.971
L H 0.961
D H 0.949
S H 0.922
I H 0.918
S H 0.930
N H 0.922
I H 0.911
E H 0.904
F H 0.850
K H 0.776
E H 0.536
L T 0.673
S T 0.681
L C 0.740
T C 0.869
R H 0.746
G H 0.838
Q H 0.921
Y H 0.950
L H 0.927
Y H 0.914
L H 0.917
V H 0.945
R H 0.927
V H 0.883
C H 0.785
E H 0.552
N C 0.389
P T 0.483
G C 0.366
I C 0.635
I C 0.799
Q H 0.974
E H 0.975
K H 0.986
I H 0.991
A H 0.986
E H 0.975
L H 0.923
I H 0.527
K T 0.666
V C 0.512
D C 0.802
R H 0.689
T H 0.758
T H 0.789
A H 0.952
A H 0.971
R H 0.980
A H 0.990
I H 0.994
K H 0.993
R H 0.992
L H 0.992
E H 0.977
E H 0.866
Q T 0.881
G T 0.895
F C 0.780
I E 0.779
Y E 0.848
R E 0.837
Q E 0.648
E C 0.495
D C 0.836
A T 0.414
S T 0.583
N G 0.432
K C 0.381
K E 0.405
I E 0.735
K E 0.851
R E 0.922
I E 0.903
Y E 0.792
A C 0.538
T C 0.865
E H 0.790
K H 0.850
G H 0.924
K H 0.965
N H 0.966
V H 0.966
Y H 0.973
P H 0.959
I H 0.935
I H 0.928
V H 0.933
R H 0.931
E H 0.947
N H 0.969
Q H 0.972
H H 0.981
S H 0.978
N H 0.977
Q H 0.973
V H 0.963
A H 0.940
L H 0.755
Q T 0.590
G T 0.753
L C 0.530
S C 0.936
E H 0.955
V H 0.974
E H 0.987
I H 0.996
S H 0.990
Q H 0.988
L H 0.993
A H 0.995
D H 0.993
Y H 0.993
L H 0.995
V H 0.991
R H 0.988
M H 0.982
R H 0.957
K H 0.814
N H 0.591
V H 0.550
S H 0.541
E H 0.513
D H 0.636
W H 0.843
E H 0.830
F H 0.871
V H 0.854
K H 0.730
K T 0.514
G T 0.667
N C 0.706
T C 0.599
R C 0.487
N C 0.754
Y C 0.995
END