PFRMAT SS
TARGET T0165
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0165.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 175
METHOD
MODEL 1
M C 0.813
Q C 0.596
L T 0.544
F T 0.605
D T 0.556
L T 0.456
P C 0.769
L H 0.679
D H 0.757
Q H 0.800
L H 0.817
Q H 0.797
T H 0.731
Y H 0.571
K H 0.373
P C 0.474
E C 0.582
K C 0.735
T C 0.745
A C 0.813
P C 0.569
K C 0.350
D H 0.414
F H 0.542
S H 0.582
E H 0.652
F H 0.660
W H 0.709
K H 0.593
L H 0.489
S H 0.558
L H 0.755
E H 0.819
E H 0.844
L H 0.786
A H 0.747
K H 0.689
V H 0.585
Q H 0.439
A H 0.515
E H 0.473
P H 0.458
D H 0.439
L H 0.368
Q C 0.345
P C 0.354
V C 0.366
D C 0.418
Y T 0.425
P C 0.462
A T 0.551
D T 0.480
G C 0.428
V C 0.552
K C 0.534
V E 0.583
Y E 0.842
R E 0.936
L E 0.965
T E 0.976
Y E 0.947
K E 0.897
S E 0.457
F T 0.885
G T 0.921
N T 0.861
A E 0.519
R E 0.874
I E 0.959
T E 0.961
G E 0.979
W E 0.976
Y E 0.958
A E 0.907
V E 0.726
P E 0.376
D T 0.521
K T 0.700
E T 0.752
G T 0.627
P C 0.552
H C 0.639
P C 0.664
A E 0.932
I E 0.991
V E 0.993
K E 0.982
Y E 0.891
H C 0.474
G C 0.607
Y C 0.494
N T 0.528
A T 0.517
S T 0.463
Y T 0.463
D T 0.438
G T 0.371
E H 0.460
I H 0.668
H H 0.877
E H 0.977
M H 0.984
V H 0.991
N H 0.993
W H 0.990
A H 0.978
L H 0.949
H H 0.718
G C 0.908
Y C 0.727
A E 0.914
T E 0.991
F E 0.993
G E 0.980
M E 0.893
L T 0.409
V T 0.805
R T 0.821
G T 0.830
Q T 0.585
Q T 0.508
S T 0.575
S T 0.495
E T 0.437
D T 0.419
T C 0.373
S C 0.294
I C 0.266
S C 0.294
P C 0.325
H C 0.371
G C 0.325
H C 0.327
A C 0.359
L H 0.467
G H 0.547
W H 0.558
M H 0.569
T H 0.608
K H 0.609
G H 0.419
I H 0.286
L T 0.346
D T 0.647
K T 0.669
D T 0.675
T T 0.568
Y C 0.306
Y C 0.265
Y H 0.355
R H 0.514
G H 0.545
V H 0.838
Y H 0.933
L H 0.953
D H 0.963
A H 0.995
V H 0.997
R H 0.996
A H 0.997
L H 0.998
E H 0.996
V H 0.993
I H 0.983
S H 0.959
S H 0.807
F T 0.458
D T 0.602
E T 0.770
V T 0.653
D T 0.653
E G 0.568
T G 0.462
R G 0.545
I E 0.716
G E 0.895
V E 0.969
T E 0.931
G E 0.687
G E 0.457
S C 0.342
Q H 0.926
G H 0.985
G H 0.995
G H 0.997
L H 0.998
T H 0.998
I H 0.997
A H 0.994
A H 0.985
A H 0.947
A H 0.733
L T 0.376
S T 0.612
D T 0.641
I T 0.437
P E 0.602
K E 0.739
A E 0.979
A E 0.988
V E 0.980
A E 0.927
D E 0.739
Y C 0.373
P C 0.378
Y T 0.359
L C 0.353
S C 0.365
N H 0.439
F H 0.506
E H 0.533
R H 0.539
A H 0.547
I H 0.432
D H 0.366
V H 0.350
A H 0.338
L H 0.486
E H 0.541
Q H 0.564
P H 0.582
Y H 0.639
L H 0.633
E H 0.615
I H 0.617
N H 0.562
S H 0.551
F H 0.549
F H 0.387
R C 0.327
R C 0.303
N T 0.347
G T 0.390
S T 0.385
P T 0.361
E C 0.397
T C 0.511
E H 0.590
V H 0.767
Q H 0.826
A H 0.854
M H 0.844
K H 0.837
T H 0.835
L H 0.678
S H 0.602
Y H 0.542
F C 0.479
D C 0.807
I H 0.765
M H 0.743
N H 0.641
L H 0.588
A H 0.513
D H 0.410
R T 0.307
V C 0.491
K C 0.731
V C 0.739
P C 0.760
V E 0.897
L E 0.972
M E 0.964
S E 0.899
I E 0.506
G C 0.462
L T 0.527
I T 0.544
D T 0.851
K T 0.855
V T 0.813
T T 0.706
P C 0.544
P H 0.684
S H 0.788
T H 0.879
V H 0.961
F H 0.988
A H 0.977
A H 0.975
Y H 0.969
N H 0.974
H H 0.975
L H 0.954
E H 0.875
T H 0.809
K H 0.481
K C 0.762
E C 0.594
L E 0.772
K E 0.931
V E 0.929
Y E 0.856
R E 0.683
Y C 0.388
F T 0.544
G T 0.688
H T 0.750
E T 0.679
Y T 0.457
I T 0.452
P T 0.390
A C 0.441
F T 0.411
Q T 0.513
T T 0.504
E T 0.432
K C 0.482
L H 0.877
A H 0.938
F H 0.936
F H 0.955
K H 0.950
Q H 0.937
H H 0.896
L H 0.744
K C 0.475
G C 0.985
END