PFRMAT SS
TARGET T0165
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0165.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 175
METHOD
MODEL 1
M C 0.998
Q C 0.813
L C 0.495
F C 0.334
D C 0.423
L C 0.443
P C 0.653
L H 0.697
D H 0.779
Q H 0.778
L H 0.823
Q H 0.779
T H 0.738
Y H 0.661
K H 0.451
P C 0.312
E C 0.492
K C 0.519
T C 0.501
A C 0.657
P C 0.621
K C 0.277
D H 0.325
F H 0.567
S H 0.626
E H 0.625
F H 0.684
W H 0.681
K H 0.583
L H 0.538
S H 0.560
L H 0.808
E H 0.830
E H 0.819
L H 0.795
A H 0.737
K H 0.652
V H 0.462
Q C 0.343
A H 0.318
E H 0.346
P H 0.368
D H 0.371
L H 0.304
Q C 0.345
P C 0.369
V C 0.285
D C 0.344
Y C 0.359
P C 0.471
A C 0.458
D C 0.480
G C 0.454
V C 0.507
K E 0.442
V E 0.616
Y E 0.857
R E 0.963
L E 0.966
T E 0.979
Y E 0.939
K E 0.838
S E 0.441
F T 0.527
G T 0.746
N T 0.498
A C 0.438
R E 0.838
I E 0.913
T E 0.945
G E 0.979
W E 0.993
Y E 0.989
A E 0.942
V E 0.738
P C 0.602
D C 0.660
K T 0.429
E T 0.382
G C 0.418
P C 0.487
H C 0.537
P C 0.590
A E 0.958
I E 0.997
V E 0.998
K E 0.996
Y E 0.953
H E 0.570
G C 0.504
Y C 0.394
N T 0.401
A T 0.347
S C 0.318
Y T 0.302
D T 0.327
G C 0.268
E H 0.534
I H 0.750
H H 0.894
E H 0.953
M H 0.982
V H 0.986
N H 0.990
W H 0.992
A H 0.983
L H 0.886
H T 0.841
G T 0.923
Y C 0.782
A E 0.889
T E 0.992
F E 0.995
G E 0.983
M E 0.868
L C 0.628
V C 0.404
R T 0.410
G S 0.311
Q C 0.389
Q T 0.285
S C 0.294
S C 0.315
E T 0.336
D C 0.269
T C 0.322
S C 0.258
I C 0.249
S C 0.244
P C 0.345
H C 0.391
G H 0.336
H H 0.447
A H 0.605
L H 0.742
G H 0.739
W H 0.720
M H 0.746
T H 0.668
K H 0.491
G T 0.327
I C 0.372
L C 0.389
D C 0.501
K T 0.471
D T 0.534
T C 0.237
Y H 0.317
Y H 0.310
Y H 0.437
R H 0.633
G H 0.700
V H 0.887
Y H 0.974
L H 0.987
D H 0.991
A H 0.998
V H 0.998
R H 0.996
A H 0.994
L H 0.994
E H 0.988
V H 0.967
I H 0.939
S H 0.857
S H 0.648
F H 0.311
D C 0.336
E C 0.316
V C 0.509
D C 0.821
E T 0.504
T T 0.614
R G 0.315
I E 0.598
G E 0.863
V E 0.955
T E 0.889
G E 0.558
G C 0.390
S C 0.357
Q H 0.854
G H 0.941
G H 0.978
G H 0.994
L H 0.994
T H 0.994
I H 0.993
A H 0.985
A H 0.946
A H 0.776
A H 0.620
L C 0.501
S C 0.388
D T 0.428
I T 0.228
P E 0.550
K E 0.690
A E 0.871
A E 0.893
V E 0.892
A E 0.791
D E 0.550
Y C 0.376
P C 0.416
Y C 0.362
L C 0.419
S C 0.466
N H 0.267
F H 0.313
E H 0.301
R H 0.342
A H 0.366
I H 0.314
D H 0.274
V H 0.322
A H 0.354
L H 0.450
E H 0.491
Q H 0.487
P H 0.536
Y H 0.581
L H 0.559
E H 0.587
I H 0.619
N H 0.622
S H 0.588
F H 0.511
F H 0.392
R C 0.363
R C 0.310
N C 0.309
G C 0.266
S H 0.292
P H 0.290
E C 0.308
T C 0.452
E H 0.485
V H 0.695
Q H 0.742
A H 0.748
M H 0.826
K H 0.828
T H 0.815
L H 0.728
S H 0.612
Y H 0.468
F S 0.355
D C 0.734
I H 0.621
M H 0.556
N G 0.457
L H 0.558
A H 0.376
D T 0.476
R T 0.396
V C 0.511
K C 0.570
V S 0.695
P C 0.649
V E 0.885
L E 0.983
M E 0.983
S E 0.957
I E 0.652
G C 0.499
L T 0.310
I T 0.295
D C 0.493
K T 0.386
V T 0.317
T S 0.426
P C 0.860
P H 0.667
S H 0.757
T H 0.830
V H 0.961
F H 0.978
A H 0.986
A H 0.992
Y H 0.990
N H 0.982
H H 0.970
L H 0.946
E H 0.859
T H 0.610
K T 0.887
K T 0.921
E C 0.693
L E 0.722
K E 0.902
V E 0.937
Y E 0.893
R E 0.758
Y E 0.437
F C 0.504
G T 0.395
H T 0.315
E S 0.343
Y C 0.276
I C 0.320
P C 0.348
A C 0.373
F C 0.483
Q C 0.377
T T 0.320
E H 0.332
K C 0.396
L H 0.783
A H 0.911
F H 0.929
F H 0.933
K H 0.909
Q H 0.851
H H 0.742
L H 0.526
K C 0.425
G C 0.990
END