PFRMAT SS
TARGET T0164
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	   11 (1 ABCDEFGHIST )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0164.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 195
METHOD
MODEL 1
N E 0.174
S B 0.237
T H 0.425
D H 0.623
V H 0.742
E H 0.880
E H 0.942
T H 0.947
L H 0.919
K H 0.917
R H 0.927
I H 0.804
Q H 0.632
N H 0.660
N S 0.370
D E 0.352
P I 0.402
D S 0.289
L A 0.316
E H 0.495
E A 0.362
V E 0.537
N E 0.364
L E 0.215
N H 0.283
N S 0.206
I E 0.204
M H 0.172
N S 0.334
I B 0.268
P B 0.417
V H 0.711
P H 0.851
T H 0.855
L H 0.922
K H 0.953
A H 0.964
C H 0.913
A H 0.873
E H 0.894
A H 0.767
L H 0.559
K H 0.542
T S 0.301
N E 0.317
T I 0.327
Y S 0.266
V A 0.385
K G 0.227
K A 0.474
F E 0.585
S E 0.486
I A 0.294
V G 0.285
G S 0.461
T E 0.262
R H 0.169
S S 0.187
N B 0.265
D H 0.528
P H 0.747
V H 0.802
A H 0.903
F H 0.951
A H 0.956
L H 0.908
A H 0.896
E H 0.918
M H 0.775
L H 0.613
K H 0.711
V H 0.321
N E 0.383
N I 0.394
T S 0.285
L A 0.456
K H 0.240
S A 0.445
L E 0.622
N E 0.457
V A 0.205
E G 0.209
S S 0.357
N E 0.220
F H 0.217
I S 0.224
S C 0.292
G H 0.589
S H 0.749
G H 0.856
I H 0.932
L H 0.964
A H 0.970
L H 0.937
V H 0.904
E H 0.899
A H 0.785
L H 0.570
Q H 0.475
S S 0.244
N E 0.315
T I 0.371
S S 0.230
L A 0.343
I H 0.235
E A 0.500
L E 0.549
R E 0.428
I E 0.279
D H 0.221
N S 0.272
Q E 0.409
S I 0.256
Q B 0.172
P S 0.165
L S 0.191
G C 0.419
N H 0.674
N H 0.848
V H 0.896
E H 0.947
M H 0.968
E H 0.964
I H 0.943
A H 0.921
N H 0.929
M H 0.809
L H 0.645
E H 0.671
K H 0.273
N E 0.312
T I 0.338
T B 0.215
L A 0.377
L B 0.210
K A 0.423
F E 0.437
G E 0.381
Y E 0.193
H B 0.135
F S 0.167
T S 0.187
Q E 0.172
Q S 0.169
G C 0.290
P H 0.336
R H 0.489
L H 0.539
R H 0.672
A H 0.779
S H 0.752
N H 0.789
A H 0.812
M H 0.659
M H 0.545
N H 0.398
N H 0.375
N H 0.444
D H 0.608
L H 0.777
V H 0.782
R H 0.740
K H 0.638
R H 0.491
R H 0.376
L H 0.276
END