Best Alignments for T0162

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment	AL alignment	E-value	FSSP rep	SCOP Domain(s)
T0162-1b3jA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0162-1b3jA-2track-protein-STR-local-adpstyle5.pw.al	1.8026e+00	1agdA	b.1.1.2
T0162-8rucI-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0162-8rucI-2track-protein-STR-local-adpstyle5.pw.al	4.5868e+00	1rboC	d.73.1.1
T0162-1a2vA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0162-1a2vA-2track-protein-STR-local-adpstyle5.pw.al	9.3623e+00	1a2vA	d.17.2.1
T0162-1gcyA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0162-1gcyA-2track-protein-STR-local-adpstyle5.pw.al	7.5511e+00	1jdc	c.1.8.1
T0162-1yasA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0162-1yasA-2track-protein-STR-local-adpstyle5.pw.al	1.2232e+01	1qj4A	c.69.1.20

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001