PFRMAT SS
TARGET T0162
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0162.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 21
METHOD
MODEL 1
M C 0.596
A C 0.543
D C 0.472
F H 0.401
E T 0.452
D T 0.506
R C 0.397
V C 0.598
S C 0.821
D H 0.968
E H 0.988
E H 0.991
K H 0.996
V H 0.999
R H 0.998
I H 0.998
A H 0.998
A H 0.995
K H 0.990
F H 0.981
I H 0.912
T H 0.866
H H 0.646
A C 0.718
P C 0.830
P T 0.356
G H 0.521
E H 0.858
F H 0.912
N H 0.987
E H 0.982
V H 0.984
F H 0.995
N H 0.988
D H 0.985
V H 0.992
R H 0.982
L H 0.965
L H 0.939
L H 0.826
N H 0.461
N C 0.436
D H 0.600
N H 0.731
L H 0.766
L H 0.812
R H 0.763
E H 0.815
G H 0.805
A H 0.931
A H 0.955
H H 0.941
A H 0.969
F H 0.967
A H 0.923
Q H 0.867
Y H 0.610
N T 0.452
M T 0.634
D T 0.673
Q T 0.526
F C 0.526
T E 0.581
P E 0.822
V E 0.895
K E 0.880
I E 0.761
E T 0.415
G T 0.704
Y T 0.726
D T 0.703
D T 0.606
Q E 0.392
V E 0.897
L E 0.960
I E 0.970
T E 0.820
E E 0.355
H T 0.630
G T 0.659
D T 0.500
L T 0.633
G T 0.752
N T 0.714
G T 0.431
R E 0.733
F E 0.856
L E 0.821
D E 0.588
P T 0.606
R T 0.616
N T 0.582
K T 0.349
I E 0.542
S E 0.843
F E 0.889
K E 0.852
F E 0.511
D H 0.557
H H 0.751
L H 0.766
R H 0.766
K H 0.671
E H 0.681
A H 0.619
S H 0.467
D C 0.479
P T 0.361
Q T 0.356
P T 0.353
E T 0.324
D C 0.391
T H 0.339
E H 0.554
S H 0.614
A H 0.697
L H 0.860
K H 0.916
Q H 0.932
W H 0.936
R H 0.962
D H 0.976
A H 0.980
C H 0.957
D H 0.988
S H 0.992
A H 0.994
L H 0.998
R H 0.999
A H 0.999
Y H 0.999
V H 0.997
K H 0.994
D H 0.985
H H 0.926
Y C 0.549
P T 0.700
N T 0.830
G T 0.848
F T 0.554
C E 0.485
T E 0.706
V E 0.819
Y E 0.906
G E 0.920
K E 0.914
S E 0.802
I T 0.505
D T 0.768
G T 0.742
Q T 0.484
Q E 0.804
T E 0.961
I E 0.990
I E 0.994
A E 0.995
C E 0.993
I E 0.969
E E 0.882
S E 0.584
H T 0.361
Q C 0.393
F C 0.386
Q T 0.519
P T 0.641
K T 0.722
N T 0.613
F T 0.363
W E 0.317
N E 0.385
G E 0.356
R E 0.636
W E 0.774
R E 0.751
S E 0.894
E E 0.962
W E 0.958
K E 0.962
F E 0.946
T E 0.849
I E 0.601
T T 0.692
P T 0.848
P T 0.743
T T 0.689
A E 0.381
Q E 0.778
V E 0.937
A E 0.955
A E 0.980
V E 0.994
L E 0.994
K E 0.996
I E 0.993
Q E 0.989
V E 0.983
H E 0.964
Y E 0.935
Y E 0.754
E T 0.661
D T 0.709
G T 0.459
N E 0.783
V E 0.964
Q E 0.981
L E 0.974
V E 0.937
S E 0.826
H E 0.528
K T 0.397
D T 0.366
I T 0.410
Q T 0.377
D E 0.313
S E 0.357
V E 0.422
Q E 0.431
V E 0.286
S C 0.388
S C 0.530
D H 0.697
V H 0.790
Q H 0.813
T H 0.883
A H 0.979
K H 0.989
E H 0.989
F H 0.994
I H 0.996
K H 0.995
I H 0.994
I H 0.996
E H 0.995
N H 0.993
A H 0.988
E H 0.994
N H 0.987
E H 0.983
Y H 0.985
Q H 0.989
T H 0.990
A H 0.967
I H 0.960
S H 0.935
E H 0.926
N H 0.825
Y H 0.710
Q H 0.578
T H 0.472
M H 0.350
S H 0.358
D H 0.721
T H 0.789
T H 0.733
F H 0.949
K H 0.973
A H 0.972
L H 0.963
R H 0.922
R H 0.882
Q H 0.687
L C 0.567
P C 0.659
V C 0.445
T C 0.381
R E 0.343
T E 0.387
K E 0.402
I C 0.365
D T 0.507
W G 0.598
N G 0.481
K G 0.517
I C 0.323
L E 0.414
S E 0.792
Y E 0.879
K E 0.833
I E 0.616
G E 0.328
K H 0.442
E H 0.361
M H 0.455
Q H 0.450
N C 0.623
A C 0.911
END