PFRMAT SS
TARGET T0161
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0161.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1
METHOD
MODEL 1
M C 0.658
S C 0.489
E H 0.525
T H 0.594
D H 0.602
L H 0.717
L H 0.745
L H 0.728
K H 0.662
M H 0.647
V H 0.630
R H 0.470
Q H 0.444
P H 0.437
V H 0.442
K H 0.488
L H 0.538
Y H 0.611
S H 0.540
V H 0.718
A H 0.758
T H 0.701
L H 0.716
F H 0.754
H H 0.744
E H 0.740
F H 0.846
S H 0.800
E H 0.856
V H 0.862
I H 0.847
T H 0.821
K H 0.778
L H 0.720
E H 0.593
H H 0.508
S H 0.373
V H 0.339
Q H 0.290
K H 0.319
E C 0.452
P C 0.449
T C 0.356
S C 0.302
L C 0.252
L C 0.306
S C 0.351
E H 0.402
E H 0.484
N H 0.511
W H 0.658
H H 0.760
K H 0.834
Q H 0.817
F H 0.837
L H 0.853
K H 0.828
F H 0.849
A H 0.786
Q H 0.745
A H 0.617
L C 0.378
P T 0.412
A T 0.494
H T 0.549
G T 0.478
S C 0.441
A T 0.348
S T 0.295
W T 0.235
L C 0.244
N C 0.392
L H 0.338
D H 0.425
D H 0.589
A H 0.781
L H 0.808
Q H 0.812
A H 0.796
V H 0.685
V H 0.604
G H 0.495
N H 0.395
S H 0.549
R H 0.675
S H 0.748
A H 0.821
F H 0.812
L H 0.872
H H 0.879
Q H 0.881
L H 0.926
I H 0.919
A H 0.904
K H 0.868
L H 0.789
K H 0.743
S H 0.677
R H 0.573
H H 0.427
L H 0.347
Q E 0.400
V E 0.619
L E 0.637
E E 0.600
L E 0.407
N T 0.275
K T 0.371
I T 0.354
G C 0.459
S C 0.483
E C 0.593
P C 0.518
L C 0.495
D C 0.474
L T 0.370
S T 0.429
N T 0.454
L T 0.401
P C 0.537
A C 0.459
P C 0.393
F E 0.511
Y E 0.686
V E 0.797
L E 0.670
L C 0.396
P C 0.307
E T 0.339
S H 0.336
F H 0.441
A H 0.566
A H 0.649
R H 0.596
I H 0.546
T H 0.493
L E 0.478
L E 0.466
V E 0.424
Q H 0.338
D T 0.312
K T 0.406
A T 0.358
L T 0.383
P C 0.341
Y E 0.441
V E 0.673
R E 0.795
V E 0.761
S E 0.669
F E 0.536
E E 0.515
Y E 0.405
W C 0.339
H C 0.575
A C 0.965
END