PFRMAT SS
TARGET T0161
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0161.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1
METHOD
MODEL 1
M C 0.999
S C 0.881
E H 0.417
T H 0.558
D H 0.663
L H 0.703
L H 0.729
L H 0.753
K H 0.757
M H 0.709
V H 0.647
R H 0.549
Q H 0.323
P C 0.400
V C 0.377
K E 0.337
L H 0.342
Y H 0.382
S H 0.397
V H 0.677
A H 0.707
T H 0.721
L H 0.746
F H 0.769
H H 0.783
E H 0.775
F H 0.845
S H 0.864
E H 0.871
V H 0.892
I H 0.863
T H 0.825
K H 0.748
L H 0.660
E H 0.574
H H 0.498
S H 0.484
V H 0.433
Q H 0.352
K H 0.339
E C 0.418
P C 0.506
T C 0.325
S C 0.305
L C 0.285
L C 0.319
S C 0.472
E H 0.441
E H 0.517
N H 0.503
W H 0.619
H H 0.727
K H 0.829
Q H 0.827
F H 0.862
L H 0.869
K H 0.860
F H 0.845
A H 0.771
Q H 0.658
A H 0.573
L H 0.332
P C 0.386
A T 0.268
H T 0.341
G C 0.292
S C 0.401
A C 0.266
S G 0.237
W C 0.228
L C 0.272
N C 0.396
L H 0.496
D H 0.671
D H 0.804
A H 0.854
L H 0.867
Q H 0.841
A H 0.821
V H 0.795
V H 0.650
G H 0.390
N H 0.273
S H 0.378
R H 0.611
S H 0.743
A H 0.820
F H 0.846
L H 0.907
H H 0.928
Q H 0.940
L H 0.956
I H 0.954
A H 0.901
K H 0.832
L H 0.744
K H 0.638
S H 0.533
R H 0.409
H H 0.324
L C 0.278
Q E 0.413
V E 0.557
L E 0.576
E E 0.537
L E 0.383
N E 0.255
K H 0.201
I C 0.275
G C 0.314
S C 0.440
E C 0.430
P C 0.604
L C 0.538
D C 0.504
L G 0.300
S T 0.339
N T 0.319
L C 0.492
P C 0.682
A C 0.495
P C 0.447
F E 0.309
Y E 0.584
V E 0.641
L E 0.557
L C 0.429
P C 0.437
E H 0.408
S H 0.444
F H 0.600
A H 0.671
A H 0.654
R H 0.639
I H 0.580
T H 0.578
L H 0.488
L H 0.473
V H 0.477
Q H 0.376
D H 0.257
K T 0.330
A T 0.248
L C 0.477
P C 0.406
Y E 0.497
V E 0.700
R E 0.788
V E 0.763
S E 0.645
F E 0.452
E E 0.426
Y E 0.380
W E 0.288
H C 0.631
A C 0.998
END