(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html
Citations (SAM, SAM-T99, HMMs)
- R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
- K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1998.
- A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
Sequence numbers correspond to the following labels:
-
- T0159 Glycine betaine-binding periplasmic protein, E. coli
-
- gi|15832796|ref|NP_311569.1|_101:251 (NC_002695) high-affinity glycine betaine / proline transport system protein [Escherichia coli O157:H7]
- gi|16130593|ref|NP_417165.1| (NC_000913) high-affinity transport system for glycine betaine and proline [Escherichia coli K12]
- gi|130994sp|P14177|PROX_ECOLI Glycine betaine-binding periplasmic protein precursor
- gi|72506|pir||BLECGP glycine betaine/proline transport system binding protein proX precursor - Escherichia coli
- gi|147375|gb|AAA24429.1| (M24856) proX peptide precursor [Escherichia coli]
- gi|1789034|gb|AAC75726.1| (AE000352) high-affinity transport system for glycine betaine and proline [Escherichia coli K12]
- gi|1800067|dbj|BAA16544.1| (D90891) GLYCINE BETAINE-BINDING PERIPLASMIC PROTEIN PRECURSOR. [Escherichia coli]
- gi|13363013|dbj|BAB36965.1| (AP002562) high-affinity glycine betaine / proline transport system protein [Escherichia coli O157:H7]
-
- gi|15803199|ref|NP_289231.1|_101:251 (NC_002655) high-affinity transport system for glycine betaine and proline [Escherichia coli O157:H7 EDL933]
- gi|12517118|gb|AAG57789.1|AE005496_12 (AE005496) high-affinity transport system for glycine betaine and proline [Escherichia coli O157:H7 EDL933]
-
- gi|16761592|ref|NP_457209.1|_101:252 (NC_003198) glycine betaine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi]
- gi|16503893|emb|CAD05922.1| (AL627276) glycine betaine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi]
-
- gi|16766122|ref|NP_461737.1|_101:252 (NC_003197) ABC superfamily (bind_prot), glycine/betaine/proline transport protein [Salmonella typhimurium LT2]
- gi|16421360|gb|AAL21696.1| (AE008828) glycine/betaine/proline transport protein [Salmonella typhimurium LT2]
-
- gi|16122854|ref|NP_406167.1|_102:250 (NC_003143) glycine betaine-binding periplasmic protein [Yersinia pestis]
- gi|22125121|ref|NP_668544.1| (NC_004088) solute-binding periplasmic protein of high-affinity glycine betaine/proline ABC transporterhigh-affinity ABC transport system for glycine betaine and proline [Yersinia pestis KIM]
- gi|15980628|emb|CAC92886.1| (AJ414153) glycine betaine-binding periplasmic protein [Yersinia pestis]
- gi|21957979|gb|AAM84795.1|AE013725_8 (AE013725) solute-binding periplasmic protein of high-affinity glycine betaine/proline ABC transporterhigh-affinity ABC transport system for glycine betaine and proline [Yersinia pestis KIM]
-
- gi|7542433|gb|AAF63445.1|AF218267_2_111:259 (AF218267) glycine betaine/L-proline-binding periplasmic protein [Pseudomonas putida]
-
- gi|15594489|ref|NP_212278.1|_97:226 (NC_001318) glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein (proX) [Borrelia burgdorferi]
- gi|7463192|pir||H70117 glycine betaine, L-proline ABC transporter, glycine/betaine/ L-proline-binding protein (proX) homolog - Lyme disease spirochete
- gi|2688024|gb|AAC66525.1| (AE001125) glycine betaine, L-proline ABC transporter, glycine/betaine/L-proline-binding protein (proX) [Borrelia burgdorferi]
-
- gi|15673433|ref|NP_267607.1|_391:518 (NC_002662) betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis]
- gi|7188801|gb|AAF37879.1|AF234619_2 (AF234619) OpuABC [Lactococcus lactis]
- gi|12724442|gb|AAK05549.1|AE006375_3 (AE006375) betaine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis]
-
- gi|15891150|ref|NP_356822.1|_133:256 (NC_003063) AGR_L_2067p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)]
- gi|15159499|gb|AAK89607.1| (AE008303) AGR_L_2067p [Agrobacterium tumefaciens str. C58 (Cereon)]
-
- gi|17937505|ref|NP_534294.1|_119:242 (NC_003305) ABC transporter, substrate binding protein [proline/glycine betaine] [Agrobacterium tumefaciens str. C58 (U. Washington)]
- gi|17742231|gb|AAL44610.1| (AE009311) ABC transporter, substrate binding protein [proline/glycine betaine] [Agrobacterium tumefaciens str. C58 (U. Washington)]
-
- gi|15966453|ref|NP_386806.1|_118:241 (NC_003047) HISTIDINE-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti]
- gi|15075724|emb|CAC47279.1| (AL591791) HISTIDINE-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti]
-
- gi|6119854|gb|AAF04259.1|AF139575_2_391:518 (AF139575) glycine-betaine binding permease protein [Lactococcus lactis]
- gi|7212814|gb|AAF40474.1|AF184955_2 (AF184955) OpuABC [Lactococcus lactis]
-
- gi|8650111|gb|AAF78097.1|AF111939_1_120:243 (AF111939) periplasmic binding protein [Sinorhizobium meliloti]
-
- gi|15674389|ref|NP_268563.1|_393:520 (NC_002737) putative glycine-betaine binding permease protein [Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS]
- gi|13621479|gb|AAK33284.1| (AE006487) putative glycine-betaine binding permease protein [Streptococcus pyogenes M1 GAS]
-
- gi|21909680|ref|NP_663948.1|_379:506 (NC_004070) putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315]
- gi|21903863|gb|AAM78751.1| (AE014139) putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS315]
-
- gi|19745348|ref|NP_606484.1|_393:520 (NC_003485) putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232]
- gi|19747452|gb|AAL96983.1| (AE009968) putative glycine-betaine binding permease protein [Streptococcus pyogenes MGAS8232]
-
- gi|21220116|ref|NP_625895.1|_408:540 (NC_003888) glycine betaine transport system permease protein [Streptomyces coelicolor A3(2)]
- gi|6119662|emb|CAB59473.1| (AL132648) glycine betaine transport system permease protein [Streptomyces coelicolor A3(2)]
-
- gi|21226144|ref|NP_632066.1|_118:246 (NC_003901) Glycine betaine transporter, substrate-binding protein [Methanosarcina mazei Goe1]
- gi|19224204|gb|AAL86440.1|AF475089_3 (AF475089) substrate binding protein OtaC [Methanosarcina mazei]
- gi|20904369|gb|AAM29738.1| (AE013223) Glycine betaine transporter, substrate-binding protein [Methanosarcina mazei Goe1]
-
- gi|17988895|ref|NP_541528.1|_100:232 (NC_003318) GLYCINE BETAINE/L-PROLINE-BINDING PROTEIN PROX [Brucella melitensis]
- gi|17984722|gb|AAL53792.1| (AE009690) GLYCINE BETAINE/L-PROLINE-BINDING PROTEIN PROX [Brucella melitensis]
-
- gi|16119443|ref|NP_396149.1|_109:241 (NC_003064) AGR_pAT_305p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)]
- gi|17938805|ref|NP_535593.1| (NC_003306) ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] [Agrobacterium tumefaciens str. C58 (Dupont)] [Agrobacterium tumefaciens str. C58 (U. Washington)]
- gi|15161979|gb|AAK90590.1| (AE007892) AGR_pAT_305p [Agrobacterium tumefaciens str. C58 (Cereon)]
- gi|17743655|gb|AAL45909.1| (AE008944) ABC transporter, nucleotide binding/ATPase protein [glycine betaine/L-proline] [Agrobacterium tumefaciens str. C58 (U. Washington)]
-
- gi|15600296|ref|NP_253790.1|_116:237 (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
- gi|11350362|pir||H83007 hypothetical protein PA5103 [imported] - Pseudomonas aeruginosa (strain PAO1)
- gi|9951399|gb|AAG08488.1|AE004923_4 (AE004923) hypothetical protein [Pseudomonas aeruginosa]
-
- gi|17548285|ref|NP_521625.1|_102:229 (NC_003296) PUTATIVE GLYCINE BETAINE TRANSMEMBRANE AND PERIPLASMIC ABC TRANSPORTER PROTEIN [Ralstonia solanacearum]
- gi|17430531|emb|CAD17215.1| (AL646076) PUTATIVE GLYCINE BETAINE TRANSMEMBRANE AND PERIPLASMIC ABC TRANSPORTER PROTEIN [Ralstonia solanacearum]
-
- gi|21220116|ref|NP_625895.1|_681:810 (NC_003888) glycine betaine transport system permease protein [Streptomyces coelicolor A3(2)]
- gi|6119662|emb|CAB59473.1| (AL132648) glycine betaine transport system permease protein [Streptomyces coelicolor A3(2)]
-
- gi|15600289|ref|NP_253783.1|_118:238 (NC_002516) probable binding protein component of ABC transporter [Pseudomonas aeruginosa]
- gi|11351117|pir||E83009 probable binding protein component of ABC transporter PA5096 [imported] - Pseudomonas aeruginosa (strain PAO1)
- gi|9951391|gb|AAG08481.1|AE004922_6 (AE004922) probable binding protein component of ABC transporter [Pseudomonas aeruginosa]
-
- gi|13471881|ref|NP_103448.1|_101:225 (NC_002678) hypothetical protein [Mesorhizobium loti]
- gi|14022625|dbj|BAB49234.1| (AP002998) hypothetical protein [Mesorhizobium loti]
-
- gi|15965818|ref|NP_386171.1|_96:219 (NC_003047) PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN [Sinorhizobium meliloti]
- gi|15075087|emb|CAC46644.1| (AL591789) PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN [Sinorhizobium meliloti]
-
- gi|16800084|ref|NP_470352.1|_33:132 (NC_003212) highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) [Listeria innocua]
- gi|16413474|emb|CAC96246.1| (AL596167) highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) [Listeria innocua]
-
- gi|4760365|gb|AAD29106.1|AF039835_3_33:132 (AF039835) putative glycine betaine binding protein GbuC [Listeria monocytogenes]
-
- gi|16803056|ref|NP_464541.1|_33:132 (NC_003210) highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) [Listeria monocytogenes EGD-e]
- gi|16410418|emb|CAC99094.1| (AL591977) highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) [Listeria monocytogenes]
-
- gi|15888235|ref|NP_353916.1|_106:231 (NC_003062) AGR_C_1631p [Agrobacterium tumefaciens] [Agrobacterium tumefaciens str. C58 (Cereon)]
- gi|17934803|ref|NP_531593.1| (NC_003304) ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58 (U. Washington)]
- gi|15155887|gb|AAK86701.1| (AE008020) AGR_C_1631p [Agrobacterium tumefaciens str. C58 (Cereon)]
- gi|17739274|gb|AAL41909.1| (AE009055) ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58 (U. Washington)]
-
- gi|16263404|ref|NP_436197.1|_104:227 (NC_003037) putative periplasmic binding protein [Sinorhizobium meliloti]
- gi|14524092|gb|AAK65609.1| (AE007281) putative periplasmic binding protein [Sinorhizobium meliloti]
-
- gi|16077369|ref|NP_388182.1|_33:127 (NC_000964) glycine betaine ABC transporter (glycine betaine-binding protein) [Bacillus subtilis]
- gi|1171921sp|P46922|OPAC_BACSU Glycine betaine-binding protein precursor
- gi|2126948|pir||I40537 glycine betaine ABC transporter (glycine betaine-binding protein) opuAC precursor - Bacillus subtilis
- gi|984805|gb|AAC43457.1| (U17292) glycine betaine-binding protein precursor [Bacillus subtilis]
- gi|1805372|dbj|BAA08934.1| (D50453) glycine betain-binding protein precursor [Bacillus subtilis]
- gi|2632586|emb|CAB12094.1| (Z99105) glycine betaine ABC transporter (glycine betaine-binding protein) [Bacillus subtilis]
-
- gi|13476104|ref|NP_107674.1|_111:232 (NC_002678) ABC transporter binding protein [Mesorhizobium loti]
- gi|14026864|dbj|BAB53460.1| (AP003011) ABC transporter binding protein [Mesorhizobium loti]
10 20 30 40 50 60
| | | | | |
1 KKFYREGVFVNGAAQGYLIDKKTAD.QYKITNIAQ.LKDPKIAKLF.DTNGDGKADLTGCNPGWG
2 KKFYREGVFVNGAAQGYLIDKKTAD.QYKITNIAQ.LKDPKIAKLF.DTNGDGKADLTGCNPGWG
3 KKFYREXVFVNGAAQGYLIDKKTAD.QYKITNIAQ.LKDPKIAKLF.DTNGDGKADLTGCNPGWG
4 KKFYREGVFVSGAAQGYLIDKKTAE.QYNITNIAQ.LKDPKIAKIF.DTNGDGKADMMGCSPGWG
5 NKFYREGVFVSGAAQGYLIDKKTAE.QYNITNIAQ.LKDPKIAKIF.DTNGDGKADMMGCSPGWG
6 -KFYRQGNYIEGLAQGYLIDKKTAD.QYNITNVAQ.LKDPKIAKLF.DANNDGKADLTGCNPGWG
7 --MVKTGDILPGVAQGYLIDKKTAD.QYNIKYITD.LKKPEIAKLF.DTDGDGKADMTGCNPGWG
8 -KFVDLGANYEGTIQGFVVPSYV--.--PISSISE.LKG-------.-KGDKFKNKMIGIDAGAG
9 KSVDLLGPNLKGAKVGFVVPSYM--.--NVNSIED.LTN-------.----QANKTITGIEPGAG
10 EGWFVPEYLVKGDPA----KGIAAK.APDLKSVDQ.LSDPKIVELFrDPEEPTKGRFLNCPSGWT
11 EGWFVPEYLVKGDPA----KGIAAK.APDLKSVDQ.LSDPKIVELFrDPEEPTKGRFLNCPSGWT
12 EGWFVPDYVVHGDPA----RNIEAK.APDLKSVSQ.LTDPKIAEIFaDPEEPSKGRFLNCPSGWT
13 KSVELLGPNLKGAKVGFVVPSYM--.--NVNSIED.LTN-------.----QANKTITGIEPGAG
14 EGWFVPDYVVHGDPA----RNIEAK.APDLKSVSQ.LTDPKIAEIFaDPEEPSKGRFLNCPSGWT
15 -KLDDLGPNLKGTKLGLAVPKYMT-.--DVNSIED.LSK-------.----QADQKITGIEPGAG
16 -KLDDLGPNLKGTKLGLAVPKYMT-.--DVNSIED.LSK-------.----QADQKITGIEPGAG
17 -KLDDLGPNLKGTKLGLAVPKYMT-.--DVNSIED.LSK-------.----QADQKITGIEPGAG
18 KQLEDLGSWYDETSLELTVPAYMK-.--DINSLED.LKG-------.-KADLFGGKITGIEPSAG
19 -RIDSVRVNLEDCTIGLAVPTYVE-.--EVNSIED.LND-------.-NKEMFNGEIIGIDPGAG
20 -KVENLGPLYEGAKLGWIVPDYIPE.S-EVSSIED.LKKPEVRE--.----KLKGEIQGIDPGAG
21 -DMIGKGLIEGGGINGYLIDKKTAD.AYNIKTLDQ.MKDPKIAALF.GT--DGKADLINCDPGWS
22 EGWWVPEYLVKGDPQ----RGIEAK.APELRSVAD.L--PRYKALFrDPEEPAKGRFYNCPTGWT
23 -KVVDLGPNFTEARIGLIVPESA--.--GAKTIED.LNA-------.-QKSAFEGRIVGIDAGAG
24 DNLVDLGTWYEPTSLEIAVPSYVK-.--DVKSLAD.LKG-------.-KSDLFDGKIIGIEPGTG
25 EGWYVPRYVIEGDPQ----RKLEAK.APKLRSIAD.LAQ--YAEVFrDPEEPGKGRFYNCPAGWT
26 -GTVAISPIGVPAWQGICANRTAAD.KYGFKDISD.LSDPKKTEAL.DTDGDGKGEMWIGAQTWS
27 KGVVTLSERAVPAWQGICATPEAAA.--TIKSVAD.LGDPAKTKIL.DTDGDGRGEMWIGAAEWL
28 -------------------------.---------.----------.DLGEQINYTITGIDAGAG
29 -------------------------.---------.----------.DLGEQINYTITGIDAGAG
30 -------------------------.---------.----------.DLGEQINYTITGIDAGAG
31 -LIQEVKILSEGGVEGWWIPKYLADeHPDIKTVEDaLKHPELFPA-.-PEDASKGAVFGCPPGWG
32 --ISAGNALSDGGIQGWYIPKYIADaHPEIKTVSDaLKHPELFPA-.-PEDSSKGAVVNGPSGWG
33 -------------------------.---------.----------.---EQVNKTIIGIDPGSG
34 ---ERLGKLGPKAKEEWWFPEYMKEkCPTLPDWHA.LLDPTCAASFsTAETSPKGRYLGGPVTW-
70 80 90 100 110 120
| | | | | |
1 CE.GAINHQLAAYELT..NTVT..HNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGK
2 CE.GAINHQLAAYELT..NTVT..HNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGK
3 CE.GAINHQLAAYELT..NTVT..HNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGK
4 CE.AVINHQNKAFDLQ..KTVE..VSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVMKPGK
5 CE.AVINHQNKAFDLQ..KTVE..VSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVMKPGK
6 CE.APINHQIKAYGLS..DTVT..HNQGNYAAMIADTITRYKEGKPILYYTWTPYWVSDVLVPGR
7 CE.LVIAHHMKAYDLD..KSIT..VNQGSYFALMADTITRYKEGKPVFYFTWVPQWIASVLVEGK
8 TQ.IVTEQALNYYGLS..KEYE..LVPSSESVMLASLDSSIKRNEWILVPLWKPHWAFSRYD---
9 VM.AASEKTLNSYDNL..KDWK..LVPSSSGAMTVALGEAIKQHKDIVITGWSPHWMFNKYD---
10 CE.GVNTAKLQAYKLD..GNYVn.FRPGTGTALDAAIAAGYLQGEPMLFYYWSPTAIMGKYK---
11 CE.GVNTAKLQAYKLD..GNYVn.FRPGTGTALDAAIAAGYLQGEPMLFYYWSPTAIMGKYK---
12 CE.GVSTAKLEAYKLG..ETYVn.FRPGTGTALDAAITSAYLQGEPILFYYWSPTAILGKFK---
13 VM.AASENTLKSYSNL..KDWK..LVPSSSGAMTVALGEAIKQHKDIVITGWSPHWIFNKYD---
14 CE.GVSTAKLEAYKLG..ETYVn.FRPGTGTALDAAITSAYLQGEPIFFYYWSPTAILGKFK---
15 IM.AAAQKTLKEYHNL..SSWE..LVAASTGAMTTSLDQAIKKKDPIVVTAWSPHWMFAKYD---
16 IM.AAAKKTLKEYHNL..SSWE..LVAASTGAMTTSLDQAIKKKDPIVVTAWSPHWMFAKYD---
17 IM.AAAKKTLKEYHNL..SSWE..LVAASTGAMTTSLDQAIKKKDPIVVTAWSPHWMFAKYD---
18 EMnLLKTKVLKEYGLD..KEYK..VVDSSTPAMLAELKRAYSKQEPIVTTLWSPHWAYNDYK---
19 VM.QITEDVIEAYDLD..--YT..LVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWD---
20 LT.RLSQEAIKKYGLD..--YK..LNISSEAAMLTTVDRANRSEGWFVATSWSPHWMFGKYK---
21 CG.DVVEYQLDKFGLK..DTVK..SVRGKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGK
22 CE.IVNSQKLKAYRLQ..DSYTn.FRTGTGPALDAAISAAFRRGEPVLFYYWSPTPLMGRFK---
23 VM.RKAGDAIKSYGLN..--YS..LMPSSGSAMTAELARSMNANKPIVVTGWAPHWMFAKWK---
24 EMqLLKNDVLPGYGLE..DEYE..VVDGSTPAMLAELKRALAKKEPVAVTLWSPHWAYSDYE---
25 CE.LENSEMLKSYGLE..ETFTn.FRPGTGPALDAAVLSSYRRGEPILFYYWSPTPLMGRAG---
26 ST.TIERIRANSYGYA..RNLT..LLEMPEDVGMAAVDAAEASDRPMVFACYAPHVVFKLHD---
27 ST.GIERARAAGYGYA..ANLT..LVEAKEEVAMAAVDAAIATARPMVFYCYAPHHVFKLHQ---
28 IM.LATQNAIKDYHLDd.DNWQ..LQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFD---
29 IM.LATQNAIKDYHLDd.DNWQ..LQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFD---
30 IM.LATQNAIKDYHLDd.DNWQ..LQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFD---
31 CQ.PTTANLFKARKAD..EKGFalIDTGSAAGLDGSISNAYEKKQGWLGYYWSPTAILGKYD---
32 AS.TTTSQLYKAYDGDakGFVL..VDPGSAAGLDGSIVKNYERKIGWFGYYWSPTSLLGKYP---
33 IM.SLTDKAMKDYDLN..-DWT..LISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRYK---
34 -E.GFDDERVAALKLP..FTVI..H-AGTDAAMFAELDSAYQRKAPIMLWIYSPHWAPAKYK---
130 140 150
| | |
1 DVVWLQVPFSALPGD.KNADTKLPNGANYG
2 DVVWLQVPFSALPGD.KNADTKLPNGANYG
3 DVVWLQVPFSALPGD.KNADTKLPNGANYG
4 DVVWLQVPFSSLPGEqKNIDTKLPNGANYG
5 DVVWLQVPFSSLPGEqKNIDTKLPNGANYG
6 DVVWLQVPFSSLPD-.KTIDTQLSNGANYG
7 DVVWLEVPKTDLPDG.KNDVDTTYHGKNLG
8 -IKFLDDPDLIMGGI.ESVHTLVRLG----
9 -LKYLADPKGTMGTS.ENINTIVRKG----
10 -LIQLQEP-------.--------------
11 -LIQLQEP-------.--------------
12 -LIQLEEP-------.--------------
13 -LKYLADPKGTMGTS.ENINTIVRKG----
14 -LIQLEEP-------.--------------
15 -LKYLKDPKEIFGST.ENINTIARKG----
16 -LKYLKDPKETFGST.ENINTIARKG----
17 -LKYLKDPKETFGST.ENINTIARKG----
18 -LKKLKDPKGAWGKG.DGVHSLSRKG----
19 -LKYLDDPQGYYGEA.DNVETLARQG----
20 -LRYIADPKGALGGA.EHIDAVARKG----
21 DVVWLPTPFDALPP-.--------------
22 -LVQLEEP-------.--------------
23 -LRFLEDPKKVFGDS.EHVDNVVNPG----
24 -LTKLKDPKKAFGEG.NTIRTIS-------
25 -LVRLEE--------.--------------
26 -IVRLTEP-------.--------------
27 -ISRLEEP-------.--------------
28 -LKFLDDPKNVFGNA.ENIHTIVRKG----
29 -LKFLDDPKNVYGNA.ENIHTIVRKG----
30 -LKFLDDPKNVYGNA.ENIHTIVRKG----
31 -MVKLDD--------.--------------
32 -MVKLD---------.--------------
33 -LKYLDDPKQSYGSA.EEIHTITRKG----
34 -GEWVQFP-------.--------------