PFRMAT SS
TARGET T0159
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0159.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 24
METHOD
MODEL 1
K C 0.877
K C 0.628
F E 0.406
Y E 0.542
R E 0.395
E C 0.331
G C 0.366
V C 0.331
F C 0.307
V C 0.378
N T 0.339
G T 0.424
A C 0.422
A C 0.303
Q E 0.335
G E 0.535
Y E 0.750
L E 0.792
I E 0.668
D C 0.542
K G 0.420
K G 0.365
T G 0.604
A G 0.343
D T 0.460
Q C 0.388
Y C 0.456
K C 0.357
I C 0.681
T C 0.553
N S 0.471
I H 0.424
A G 0.479
Q G 0.586
L H 0.444
K H 0.313
D C 0.461
P H 0.623
K H 0.674
I H 0.654
A H 0.623
K H 0.668
L H 0.547
F H 0.353
D C 0.724
T T 0.486
N T 0.577
G S 0.297
D C 0.355
G C 0.356
K C 0.354
A E 0.381
D E 0.690
L E 0.773
T E 0.691
G E 0.386
C C 0.587
N C 0.709
P T 0.473
G T 0.460
W S 0.230
G H 0.308
C H 0.471
E H 0.607
G H 0.711
A H 0.809
I H 0.896
N H 0.962
H H 0.959
Q H 0.950
L H 0.942
A H 0.883
A H 0.745
Y T 0.567
E T 0.772
L C 0.674
T C 0.418
N T 0.530
T T 0.376
V E 0.811
T E 0.908
H E 0.865
N E 0.551
Q C 0.385
G C 0.436
N C 0.590
Y H 0.804
A H 0.913
A H 0.954
M H 0.969
M H 0.981
A H 0.988
D H 0.992
T H 0.992
I H 0.990
S H 0.988
R H 0.974
Y H 0.934
K H 0.724
E T 0.814
G T 0.837
K C 0.668
P C 0.683
V E 0.947
F E 0.991
Y E 0.995
Y E 0.984
T E 0.768
W E 0.462
T C 0.554
P H 0.232
Y H 0.345
W H 0.346
V H 0.425
S G 0.489
N G 0.376
E G 0.277
L C 0.326
K C 0.793
P T 0.707
G T 0.687
K S 0.440
D C 0.508
V E 0.457
V E 0.532
W E 0.424
L C 0.329
Q C 0.300
V C 0.382
P C 0.347
F T 0.300
S G 0.349
A G 0.251
L S 0.448
P C 0.441
G T 0.389
D C 0.303
K C 0.371
N C 0.449
A C 0.309
D C 0.237
T E 0.230
K E 0.232
L C 0.349
P C 0.290
N T 0.432
G C 0.351
A C 0.526
N C 0.447
Y C 0.714
G C 0.998
END