PFRMAT SS TARGET T0159 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0159.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 45 METHOD MODEL 1 A C 0.992 D C 0.759 L C 0.511 P C 0.403 G T 0.292 K T 0.312 G C 0.414 I C 0.449 T E 0.486 V E 0.803 N E 0.860 P E 0.839 V E 0.713 Q E 0.481 S C 0.498 T C 0.610 I H 0.575 T H 0.734 E H 0.888 E H 0.954 T H 0.960 F H 0.973 Q H 0.984 T H 0.991 L H 0.994 L H 0.996 V H 0.997 S H 0.997 R H 0.996 A H 0.996 L H 0.993 E H 0.972 K H 0.887 L T 0.690 G T 0.880 Y C 0.828 T C 0.497 V E 0.530 N E 0.639 K E 0.654 P E 0.532 S E 0.438 E E 0.414 V C 0.393 D C 0.339 Y E 0.372 N E 0.401 V E 0.443 G H 0.425 Y H 0.511 T H 0.516 S H 0.535 L H 0.647 A H 0.663 S T 0.463 G T 0.478 D C 0.590 A E 0.437 T E 0.506 F E 0.604 T E 0.587 A H 0.390 V G 0.359 N G 0.401 W H 0.370 T C 0.314 P H 0.300 L H 0.298 H H 0.344 D H 0.670 N H 0.839 M H 0.865 Y H 0.891 E H 0.896 A H 0.863 A H 0.804 G H 0.674 G H 0.419 D T 0.781 K C 0.328 K C 0.704 F E 0.620 Y E 0.701 R E 0.659 E E 0.542 G C 0.433 V C 0.307 F C 0.300 V C 0.384 N T 0.335 G T 0.415 A E 0.390 A E 0.593 Q E 0.717 G E 0.756 Y E 0.820 L E 0.753 I E 0.560 D C 0.679 K G 0.375 K G 0.343 T G 0.535 A H 0.333 D T 0.455 Q C 0.420 Y T 0.387 K T 0.471 I C 0.661 T C 0.536 N S 0.492 I H 0.550 A G 0.441 Q G 0.579 L H 0.462 K H 0.467 D H 0.323 P C 0.364 K H 0.365 I H 0.360 A H 0.327 K H 0.333 L S 0.284 F C 0.438 D C 0.676 T T 0.450 N T 0.458 G C 0.277 D T 0.308 G T 0.338 K T 0.324 A C 0.324 D E 0.606 L E 0.699 T E 0.590 G E 0.307 C C 0.717 N C 0.784 P T 0.403 G T 0.392 W S 0.289 G H 0.377 C H 0.695 E H 0.840 G H 0.909 A H 0.947 I H 0.970 N H 0.981 H H 0.978 Q H 0.971 L H 0.957 A H 0.914 A H 0.751 Y T 0.638 E T 0.655 L C 0.668 T C 0.374 N T 0.476 T C 0.301 V E 0.789 T E 0.882 H E 0.818 N E 0.546 Q C 0.415 G C 0.488 N C 0.677 Y H 0.895 A H 0.956 A H 0.976 M H 0.986 M H 0.990 A H 0.991 D H 0.993 T H 0.993 I H 0.992 S H 0.990 R H 0.979 Y H 0.942 K H 0.719 E T 0.858 G T 0.851 K C 0.683 P C 0.692 V E 0.956 F E 0.994 Y E 0.996 Y E 0.987 T E 0.798 W E 0.505 T C 0.520 P C 0.390 Y G 0.343 W G 0.433 V G 0.521 S G 0.657 N G 0.473 E G 0.368 L C 0.371 K C 0.826 P T 0.678 G T 0.667 K S 0.454 D C 0.518 V E 0.474 V E 0.529 W E 0.447 L C 0.421 Q C 0.409 V S 0.433 P C 0.625 F T 0.322 S C 0.259 A C 0.344 L C 0.388 P C 0.427 G C 0.344 D C 0.320 K C 0.365 N C 0.445 A C 0.310 D C 0.339 T T 0.277 K C 0.331 L C 0.449 P C 0.439 N C 0.400 G C 0.333 A T 0.308 N T 0.256 Y C 0.275 G C 0.301 F C 0.452 P C 0.644 V H 0.458 S H 0.528 T H 0.601 M H 0.689 H H 0.705 I H 0.710 V H 0.758 A H 0.749 N H 0.699 K H 0.647 A H 0.529 W H 0.608 A H 0.699 E H 0.610 K H 0.715 N H 0.355 P H 0.673 A H 0.780 A H 0.943 A H 0.979 K H 0.979 L H 0.977 F H 0.961 A H 0.897 I H 0.681 M S 0.297 Q C 0.507 L C 0.684 P C 0.951 V H 0.815 A H 0.892 D H 0.913 I H 0.974 N H 0.955 A H 0.970 Q H 0.976 N H 0.980 A H 0.974 I H 0.972 M H 0.959 H H 0.871 A H 0.535 G T 0.481 A C 0.359 A C 0.294 S S 0.365 E C 0.392 G S 0.395 D C 0.667 I H 0.829 Q H 0.902 G H 0.941 H H 0.970 V H 0.981 D H 0.985 G H 0.992 W H 0.989 I H 0.988 K H 0.966 A H 0.907 H H 0.604 Q H 0.779 Q H 0.683 Q H 0.638 F H 0.737 D H 0.551 G H 0.464 W H 0.505 V H 0.457 N C 0.421 E H 0.760 A H 0.732 L H 0.723 A H 0.613 A H 0.416 Q C 0.455 K C 0.996 END