PFRMAT SS
TARGET T0158
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0158.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 234
METHOD
MODEL 1
M C 0.812
K C 0.629
P C 0.559
E C 0.483
N C 0.446
K C 0.411
L C 0.473
P C 0.544
V C 0.630
L C 0.653
D C 0.563
L T 0.384
I C 0.350
S C 0.421
A H 0.471
E H 0.671
M H 0.688
K H 0.693
T H 0.715
V H 0.735
V H 0.666
N H 0.560
T H 0.354
L C 0.539
Q C 0.468
P C 0.441
D C 0.439
L C 0.498
P C 0.502
P C 0.471
W C 0.404
P C 0.367
A C 0.411
T C 0.430
G C 0.470
T C 0.506
I H 0.522
A H 0.517
E H 0.549
Q H 0.612
R H 0.613
Q H 0.673
Y H 0.688
Y H 0.636
T H 0.605
L H 0.576
E H 0.567
R H 0.437
R H 0.373
F C 0.415
W C 0.466
N C 0.475
A C 0.420
G C 0.459
A T 0.431
P T 0.405
E C 0.379
M C 0.408
A C 0.373
T E 0.483
R E 0.568
A E 0.607
Y E 0.683
M E 0.723
V E 0.686
P E 0.547
T T 0.359
K T 0.627
Y T 0.726
G T 0.719
Q T 0.476
V E 0.539
E E 0.771
T E 0.942
R E 0.957
L E 0.944
F E 0.911
C E 0.706
P T 0.342
Q T 0.594
P T 0.715
D T 0.626
S C 0.705
P C 0.630
A C 0.524
T E 0.940
L E 0.990
F E 0.995
Y E 0.992
L E 0.939
H C 0.526
G C 0.776
G C 0.475
G T 0.413
F H 0.355
I H 0.444
L H 0.315
G C 0.480
N T 0.631
L T 0.470
D T 0.425
T T 0.347
H C 0.386
D H 0.505
R H 0.897
I H 0.971
M H 0.994
R H 0.995
L H 0.997
L H 0.998
A H 0.994
S H 0.990
Y H 0.976
S H 0.780
Q C 0.944
C C 0.865
T E 0.851
V E 0.991
I E 0.993
G E 0.984
I E 0.887
D E 0.465
Y T 0.406
T T 0.382
L T 0.420
S T 0.617
P T 0.607
E T 0.619
A T 0.568
R C 0.644
F C 0.705
P C 0.382
Q H 0.618
A H 0.808
I H 0.957
E H 0.974
E H 0.976
I H 0.998
V H 0.999
A H 0.999
A H 0.999
C H 1.000
C H 0.998
Y H 0.997
F H 0.989
H H 0.960
Q H 0.953
Q H 0.887
A H 0.781
E H 0.559
D H 0.549
Y H 0.401
Q C 0.802
I C 0.764
N T 0.509
M T 0.550
S T 0.598
R T 0.370
I E 0.898
G E 0.968
F E 0.974
A E 0.850
G C 0.414
D T 0.361
S T 0.322
A H 0.892
G H 0.967
A H 0.989
M H 0.994
L H 0.998
A H 0.999
L H 0.998
A H 0.998
S H 0.997
A H 0.994
L H 0.984
W H 0.939
L H 0.877
R H 0.702
D H 0.567
K H 0.551
Q C 0.439
I T 0.463
D T 0.442
C T 0.447
G C 0.669
K C 0.611
V C 0.345
A E 0.313
G E 0.691
V E 0.892
L E 0.923
L E 0.894
W E 0.702
Y C 0.342
G T 0.371
L T 0.455
Y T 0.428
G T 0.500
L T 0.455
R T 0.453
D T 0.452
S C 0.454
V C 0.551
T H 0.402
R H 0.438
R H 0.506
L H 0.545
L H 0.534
G H 0.446
G T 0.359
V T 0.434
W T 0.524
D T 0.466
G T 0.408
L C 0.482
T C 0.788
Q H 0.858
Q H 0.924
D H 0.949
L H 0.981
Q H 0.990
M H 0.990
Y H 0.989
E H 0.981
E H 0.970
A H 0.941
Y H 0.737
L C 0.415
S T 0.489
N T 0.635
D T 0.619
A T 0.558
D T 0.570
R T 0.591
E T 0.589
S T 0.615
P T 0.444
Y T 0.371
Y C 0.364
C C 0.546
L C 0.371
F T 0.335
N C 0.362
N T 0.379
D G 0.437
L T 0.419
T T 0.522
R T 0.675
E T 0.623
V T 0.436
P C 0.831
P E 0.464
C E 0.925
F E 0.982
I E 0.987
A E 0.973
G E 0.886
A E 0.405
E T 0.417
F C 0.522
D T 0.443
P T 0.456
L T 0.370
L H 0.386
D H 0.523
D H 0.688
S H 0.900
R H 0.985
L H 0.993
L H 0.995
Y H 0.995
Q H 0.996
T H 0.995
L H 0.994
A H 0.989
A H 0.962
H H 0.811
Q C 0.958
Q C 0.898
P C 0.650
C E 0.912
E E 0.962
F E 0.974
K E 0.954
L E 0.800
Y T 0.488
P T 0.859
G T 0.870
T T 0.656
L E 0.366
H E 0.431
A E 0.439
F E 0.360
L E 0.385
H E 0.277
Y T 0.325
S T 0.503
R T 0.489
M T 0.436
M T 0.348
K H 0.768
T H 0.885
A H 0.939
D H 0.974
E H 0.982
A H 0.987
L H 0.991
R H 0.993
D H 0.994
G H 0.994
A H 0.990
Q H 0.985
F H 0.979
F H 0.971
T H 0.908
A H 0.760
Q C 0.478
L C 0.969
END