PFRMAT SS
TARGET T0158
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0158.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 234
METHOD
MODEL 1
M C 0.985
K C 0.490
P E 0.660
E E 0.714
N E 0.696
K E 0.668
L E 0.511
P C 0.369
V C 0.487
L C 0.591
D C 0.705
L C 0.362
I C 0.335
S C 0.486
A H 0.614
E H 0.672
M H 0.794
K H 0.809
T H 0.778
V H 0.740
V H 0.705
N H 0.556
T H 0.349
L C 0.505
Q C 0.586
P C 0.527
D C 0.431
L C 0.467
P C 0.541
P C 0.552
W C 0.514
P C 0.471
A C 0.463
T C 0.479
G C 0.554
T C 0.681
I H 0.305
A H 0.316
E H 0.340
Q H 0.413
R H 0.496
Q H 0.545
Y H 0.562
Y H 0.557
T H 0.547
L H 0.544
E H 0.472
R H 0.354
R C 0.352
F C 0.416
W C 0.367
N C 0.439
A C 0.419
G C 0.487
A C 0.547
P C 0.466
E C 0.373
M C 0.383
A C 0.382
T E 0.540
R E 0.588
A E 0.662
Y E 0.667
M E 0.629
V E 0.600
P E 0.453
T C 0.412
K C 0.330
Y T 0.379
G T 0.448
Q C 0.337
V C 0.440
E E 0.756
T E 0.926
R E 0.972
L E 0.952
F E 0.922
C E 0.768
P C 0.570
Q C 0.603
P C 0.472
D T 0.349
S S 0.377
P S 0.638
A C 0.581
T E 0.947
L E 0.997
F E 0.999
Y E 0.993
L E 0.896
H C 0.453
G C 0.418
G T 0.328
G T 0.362
F T 0.376
I T 0.341
L T 0.368
G S 0.363
N C 0.538
L G 0.381
D H 0.393
T H 0.493
H H 0.805
D H 0.892
R H 0.947
I H 0.970
M H 0.988
R H 0.993
L H 0.994
L H 0.996
A H 0.993
S H 0.975
Y H 0.916
S T 0.506
Q T 0.835
C C 0.855
T E 0.439
V E 0.970
I E 0.992
G E 0.988
I E 0.897
D C 0.464
Y C 0.559
T C 0.392
L C 0.388
S C 0.584
P C 0.523
E C 0.435
A C 0.378
R C 0.571
F C 0.669
P C 0.508
Q H 0.347
A H 0.658
I H 0.947
E H 0.985
E H 0.993
I H 0.998
V H 0.998
A H 0.998
A H 0.998
C H 0.998
C H 0.997
Y H 0.994
F H 0.991
H H 0.966
Q H 0.884
Q H 0.840
A H 0.858
E H 0.761
D H 0.623
Y H 0.432
Q T 0.695
I C 0.742
N C 0.903
M G 0.442
S T 0.625
R G 0.299
I E 0.823
G E 0.956
F E 0.977
A E 0.895
G E 0.489
D S 0.354
S C 0.329
A H 0.679
G H 0.851
A H 0.966
M H 0.988
L H 0.993
A H 0.996
L H 0.994
A H 0.992
S H 0.988
A H 0.960
L H 0.873
W H 0.792
L H 0.658
R H 0.640
D H 0.490
K T 0.439
Q T 0.612
I C 0.600
D C 0.623
C C 0.574
G C 0.621
K C 0.673
V C 0.649
A E 0.662
G E 0.954
V E 0.979
L E 0.985
L E 0.958
W E 0.810
Y E 0.454
G C 0.385
L C 0.242
Y C 0.305
G C 0.447
L C 0.267
R C 0.298
D C 0.280
S C 0.443
V C 0.506
T H 0.344
R H 0.452
R H 0.618
L H 0.592
L H 0.515
G H 0.417
G H 0.332
V T 0.398
W C 0.329
D C 0.327
G C 0.290
L C 0.471
T C 0.773
Q H 0.927
Q H 0.951
D H 0.961
L H 0.983
Q H 0.976
M H 0.968
Y H 0.962
E H 0.953
E H 0.922
A H 0.847
Y H 0.720
L H 0.298
S C 0.515
N C 0.309
D T 0.365
A C 0.352
D C 0.501
R C 0.328
E C 0.289
S C 0.500
P T 0.367
Y T 0.353
Y C 0.419
C C 0.646
L H 0.302
F H 0.307
N C 0.314
N C 0.384
D T 0.244
L C 0.256
T C 0.293
R T 0.601
E T 0.711
V S 0.486
P C 0.912
P C 0.450
C E 0.973
F E 0.996
I E 0.998
A E 0.991
G E 0.858
A C 0.432
E S 0.345
F S 0.331
D C 0.535
P T 0.328
L C 0.340
L H 0.402
D H 0.831
D H 0.886
S H 0.967
R H 0.985
L H 0.991
L H 0.994
Y H 0.996
Q H 0.995
T H 0.994
L H 0.993
A H 0.969
A H 0.782
H T 0.833
Q T 0.932
Q C 0.757
P E 0.537
C E 0.919
E E 0.986
F E 0.981
K E 0.969
L E 0.885
Y E 0.544
P T 0.848
G T 0.880
T C 0.460
L E 0.597
H E 0.700
A E 0.632
F E 0.547
L E 0.508
H E 0.234
Y C 0.395
S C 0.327
R T 0.333
M C 0.254
M C 0.428
K H 0.732
T H 0.833
A H 0.935
D H 0.967
E H 0.975
A H 0.981
L H 0.991
R H 0.993
D H 0.995
G H 0.996
A H 0.995
Q H 0.986
F H 0.973
F H 0.956
T H 0.859
A H 0.492
Q T 0.411
L C 0.997
END