Best Alignments for T0157

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0157-1hjrA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0157-1hjrA-2track-protein-STR-local-adpstyle5.pw.al 2.0220e-02 1hjrA c.55.3.6
T0157-1tplA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0157-1tplA-2track-protein-STR-local-adpstyle5.pw.al 1.8221e-01 1ax4A c.67.1.2
T0157-1dkuA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0157-1dkuA-2track-protein-STR-local-adpstyle5.pw.al 8.6184e-01 1dkuA c.61.1.2
T0157-1kcfA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0157-1kcfA-2track-protein-STR-local-adpstyle5.pw.al 8.0084e-01 c.55.3.7
T0157-1j79A-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0157-1j79A-2track-protein-STR-local-adpstyle5.pw.al 1.8364e+00 1j79A c.1.9.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001