Best Alignments for T0154

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0154-1ihoA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0154-1ihoA-2track-protein-STR-local-adpstyle5.pw.al 1.6037e-52 1ihoA c.26.1.4
T0154-1cozA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0154-1cozA-2track-protein-STR-local-adpstyle5.pw.al 6.0400e-03 1cozA c.26.1.2
T0154-1qjcA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0154-1qjcA-2track-protein-STR-local-adpstyle5.pw.al 4.4622e-02 1b6tA c.26.1.3
T0154-1jhdA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0154-1jhdA-2track-protein-STR-local-adpstyle5.pw.al 2.7739e-01 b.58.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001