PFRMAT SS
TARGET T0152
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0152.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 28
METHOD
MODEL 1
M C 0.999
T C 0.764
K C 0.499
P C 0.517
T C 0.386
S C 0.418
A C 0.519
G C 0.343
Q C 0.361
A H 0.468
D H 0.562
D H 0.531
A H 0.556
L H 0.531
V H 0.550
R H 0.459
L H 0.384
A C 0.343
R C 0.390
E C 0.593
R C 0.701
F C 0.591
D C 0.652
L C 0.729
P C 0.656
D C 0.601
Q C 0.592
V C 0.445
R C 0.368
R C 0.429
L C 0.409
A C 0.498
R C 0.485
P C 0.559
P C 0.524
V C 0.645
P T 0.283
S T 0.396
L T 0.275
E C 0.287
P S 0.361
P C 0.383
Y E 0.769
G E 0.917
L E 0.865
R E 0.695
V E 0.624
A C 0.861
Q C 0.931
L H 0.652
T H 0.679
D H 0.782
A H 0.976
E H 0.972
M H 0.961
L H 0.973
A H 0.962
E H 0.897
W H 0.797
M H 0.573
N T 0.393
R C 0.543
P H 0.708
H H 0.718
L H 0.875
A H 0.920
A H 0.890
A H 0.855
W H 0.783
E H 0.577
Y H 0.398
D C 0.368
W C 0.583
P C 0.765
A H 0.890
S H 0.937
R H 0.950
W H 0.967
R H 0.956
Q H 0.952
H H 0.942
L H 0.950
N H 0.943
A H 0.932
Q H 0.890
L H 0.731
E H 0.370
G C 0.421
T T 0.345
Y T 0.353
S C 0.506
L E 0.491
P E 0.703
L E 0.911
I E 0.952
G E 0.963
S E 0.902
W E 0.734
H T 0.829
G T 0.724
T E 0.530
D E 0.816
G E 0.927
G E 0.946
Y E 0.922
L E 0.960
E E 0.957
L E 0.937
Y E 0.791
W E 0.451
A C 0.420
A T 0.295
K G 0.349
D C 0.366
L C 0.281
I C 0.323
S C 0.344
H C 0.322
Y C 0.344
Y C 0.426
D C 0.513
A C 0.758
D C 0.828
P T 0.804
Y T 0.819
D C 0.674
L E 0.530
G E 0.898
L E 0.928
H E 0.926
A E 0.904
A E 0.781
I E 0.614
A E 0.470
D C 0.566
L G 0.358
S G 0.419
K G 0.362
V T 0.369
N T 0.312
R S 0.303
G C 0.263
F H 0.379
G H 0.655
P H 0.901
L H 0.947
L H 0.972
L H 0.983
P H 0.991
R H 0.994
I H 0.995
V H 0.992
A H 0.985
S H 0.956
V H 0.907
F H 0.721
A H 0.403
N T 0.363
E C 0.607
P T 0.552
R T 0.551
C C 0.496
R E 0.644
R E 0.883
I E 0.930
M E 0.897
F E 0.781
D C 0.542
P C 0.583
D C 0.517
H H 0.329
R H 0.503
N H 0.669
T H 0.908
A H 0.953
T H 0.976
R H 0.988
R H 0.989
L H 0.982
C H 0.967
E H 0.921
W H 0.818
A T 0.449
G T 0.768
C C 0.706
K E 0.460
F C 0.448
L E 0.364
G E 0.527
E E 0.584
H E 0.557
D C 0.463
T C 0.631
T T 0.591
N T 0.610
R S 0.426
R C 0.464
M E 0.684
A E 0.850
L E 0.844
Y E 0.765
A E 0.758
L E 0.573
E E 0.416
A C 0.277
P H 0.319
T H 0.310
T H 0.262
A C 0.525
A C 0.996
END