PFRMAT SS TARGET T0151 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0151.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 147 METHOD MODEL 1 M C 0.976 A C 0.642 G C 0.402 D C 0.478 T C 0.444 T E 0.767 I E 0.973 T E 0.988 I E 0.983 V E 0.910 G E 0.701 N E 0.540 L E 0.315 T T 0.328 A S 0.396 D C 0.609 P T 0.560 E T 0.490 L E 0.392 R E 0.632 F E 0.639 T C 0.766 P T 0.684 S T 0.701 G S 0.805 A C 0.731 A E 0.662 V E 0.953 A E 0.988 N E 0.987 F E 0.985 T E 0.979 V E 0.930 A E 0.721 S E 0.508 T C 0.458 P C 0.380 R C 0.334 I C 0.395 Y E 0.335 D C 0.528 R T 0.528 Q T 0.615 T T 0.371 G C 0.390 E C 0.402 W E 0.486 K E 0.490 D E 0.360 G C 0.403 E C 0.410 A E 0.635 L E 0.765 F E 0.896 L E 0.897 R E 0.871 C E 0.920 N E 0.949 I E 0.795 W E 0.471 R H 0.314 E H 0.613 A H 0.850 A H 0.965 E H 0.980 N H 0.986 V H 0.983 A H 0.972 E H 0.924 S H 0.844 L H 0.686 T H 0.491 R T 0.504 G T 0.442 A C 0.584 R E 0.643 V E 0.956 I E 0.989 V E 0.986 S E 0.961 G E 0.897 R E 0.907 L E 0.884 K E 0.894 Q E 0.859 R E 0.617 S E 0.681 F E 0.700 E E 0.694 T C 0.505 R T 0.684 E T 0.776 G S 0.606 E C 0.511 K E 0.871 R E 0.893 T E 0.940 V E 0.926 I E 0.962 E E 0.988 V E 0.980 E E 0.979 V E 0.926 D E 0.800 E E 0.713 I E 0.629 G E 0.655 P E 0.578 S E 0.315 L C 0.264 R C 0.320 Y C 0.270 A H 0.287 T C 0.275 A H 0.273 K T 0.260 V C 0.309 N C 0.373 K C 0.399 A C 0.344 S C 0.383 R C 0.360 S C 0.341 G C 0.323 G C 0.358 F C 0.339 G C 0.348 S C 0.352 G C 0.325 S C 0.374 R C 0.364 P C 0.330 A C 0.366 P C 0.361 A C 0.310 Q C 0.294 T C 0.351 S C 0.315 S C 0.305 A C 0.333 S C 0.310 G C 0.356 D C 0.391 D C 0.419 P C 0.375 W C 0.390 G C 0.338 S C 0.380 A C 0.376 P C 0.418 A T 0.370 S C 0.307 G C 0.446 S C 0.497 F C 0.496 G C 0.485 G C 0.438 G C 0.462 D C 0.321 D T 0.389 E C 0.351 P C 0.524 P C 0.817 F C 0.957 END