Best Alignments for T0151

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0151-1pmlA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0151-1pmlA-2track-protein-STR-local-adpstyle5.pw.al 3.0710e+00 5hpgA g.14.1.1
T0151-1qbhA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0151-1qbhA-2track-protein-STR-local-adpstyle5.pw.al 1.2415e+01 1g3fA g.52.1.1
T0151-1kxrA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0151-1kxrA-2track-protein-STR-local-adpstyle5.pw.al 1.6544e+01
T0151-1hcz-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0151-1hcz-2track-protein-STR-local-adpstyle5.pw.al 1.4428e+01 1hcz b.2.6.1
T0151-2cae-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0151-2cae-2track-protein-STR-local-adpstyle5.pw.al 1.3361e+01 1cf9A e.5.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001