PFRMAT SS TARGET T0151 METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 6 (1 EBGHTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0151.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 4 METHOD MODEL 1 L C 0.800 R C 0.651 Y E 0.602 A E 0.738 T E 0.905 A E 0.891 K E 0.899 V E 0.831 N E 0.638 K E 0.434 A T 0.339 S T 0.364 R T 0.403 S T 0.401 G T 0.414 G T 0.469 F T 0.457 G T 0.462 S T 0.447 G T 0.464 S T 0.410 R T 0.398 P T 0.395 A T 0.379 P T 0.432 A T 0.417 Q T 0.388 T T 0.306 S C 0.355 S C 0.395 A T 0.433 S T 0.542 G T 0.570 D T 0.558 D T 0.553 P T 0.526 W T 0.507 G T 0.498 S T 0.431 A C 0.431 P T 0.397 A T 0.498 S T 0.485 G T 0.519 S T 0.617 F T 0.527 G T 0.511 G C 0.466 G T 0.520 D T 0.614 D T 0.565 E T 0.446 P C 0.691 P C 0.823 F C 0.974 END