% (null) % (c) 1992-2001 Regents of the University of California, Santa Cruz % % Sequence Alignment and Modeling Software System % http://www.cse.ucsc.edu/research/compbio/sam.html % % ----------------- Citations (SAM, SAM-T99, HMMs) -------------------- % R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: % Extension and analysis of the basic method, CABIOS 12:95-107, 1996. % K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting % remote protein homologies, Bioinformatics 14(10):846-856, 1998. % A. Krogh et al., Hidden Markov models in computational biology: % Applications to protein modeling, JMB 235:1501-1531, Feb 1994. % --------------------------------------------------------------------- % T0151.t2k Host: hoot Wed Jul 24 16:46:32 2002 % karplus Dir: /projects/compbio/experiments/casp5/t0151/110-164 % --------------------------------------------------------------------- % Sequence-model (global) (SW = 0) % Track 0 Coeff 1.000 File T0151.t2k-w0.5.mod % Track 1 Coeff 0.300 File T0151.t2k.str.mod 1i07A.1.0 60 -119.40 -119.40 1aojA.1.0 60 -116.70 -116.70 1i0cA.1.0 60 -115.63 -115.63 1i07A.1.1 60 -113.96 -113.96 1dy5A.1.1 124 -113.15 -113.15 7rsa.1.1 124 -112.93 -112.93 1i07A.2.2 60 -119.64 -119.64 1aojA.2.2 60 -118.92 -118.92 1dy5A.2.2 124 -118.44 -118.44 1i0cA.2.2 60 -118.13 -118.13 7rsa.2.2 124 -117.89 -117.89 1rnd.2.2 124 -117.82 -117.82 1f37A.3.3 110 -120.18 -120.18 1dy5A.3.3 124 -119.15 -119.15 1i07A.3.3 60 -119.03 -119.03 1aojA.3.3 60 -118.54 -118.54 7rsa.3.3 124 -118.51 -118.51 1rnd.3.3 124 -118.45 -118.45 1f37A.4.4 110 -123.39 -123.39 1dy5A.4.4 124 -117.78 -117.78 1i07A.4.4 60 -117.45 -117.45 7rsa.4.4 124 -117.06 -117.06 1aojA.4.4 60 -116.98 -116.98 1rnd.4.4 124 -116.98 -116.98 1f37A.5.5 110 -125.99 -125.99 1dy5A.5.5 124 -118.46 -118.46 7rsa.5.5 124 -117.66 -117.66 1rnd.5.5 124 -117.57 -117.57 1cpcB.5.5 172 -117.25 -117.25 1cpcL.5.5 172 -117.23 -117.23 1f37A.6.6 110 -126.29 -126.29 1dy5A.6.6 124 -119.53 -119.53 7rsa.6.6 124 -118.63 -118.63 1rnd.6.6 124 -118.54 -118.54 1cpcB.6.6 172 -116.94 -116.94 1cpcL.6.6 172 -116.92 -116.92 1f37A.7.7 110 -124.85 -124.85 1dy5A.7.7 124 -119.85 -119.85 7rsa.7.7 124 -118.82 -118.82 1rnd.7.7 124 -118.75 -118.75 1i07A.7.7 60 -117.28 -117.28 2bosA.7.7 68 -116.90 -116.90 1f37A.8.8 110 -122.96 -122.96 1dy5A.8.8 124 -121.37 -121.37 1i07A.8.8 60 -120.33 -120.33 7rsa.8.8 124 -120.25 -120.25 1rnd.8.8 124 -120.18 -120.18 1aojA.8.8 60 -119.85 -119.85 1i07A.9.9 60 -123.00 -123.00 1f37A.9.9 110 -122.44 -122.44 1aojA.9.9 60 -122.32 -122.32 1i0cA.9.9 60 -121.50 -121.50 1dy5A.9.9 124 -121.14 -121.14 1lmq.9.9 129 -120.66 -120.66 1i07A.10.10 60 -123.57 -123.57 1f37A.10.10 110 -123.19 -123.19 1aojA.10.10 60 -122.76 -122.76 1i0cA.10.10 60 -122.14 -122.14 1lmq.10.10 129 -121.02 -121.02 1i4fB.10.10 100 -118.72 -118.72 1f37A.11.11 110 -125.28 -125.28 1i07A.11.11 60 -123.43 -123.43 1aojA.11.11 60 -122.41 -122.41 1i0cA.11.11 60 -122.12 -122.12 4aahA.11.11 571 -120.97 -120.97 1lmq.11.11 129 -118.54 -118.54 1f37A.12.12 110 -124.83 -124.83 4aahA.12.12 571 -122.29 -122.29 1i07A.12.12 60 -121.81 -121.81 1aojA.12.12 60 -120.70 -120.70 1i0cA.12.12 60 -120.60 -120.60 1b9oA.12.12 123 -115.51 -115.51 1f37A.13.13 110 -123.71 -123.71 4aahA.13.13 571 -123.34 -123.34 1i07A.13.13 60 -118.71 -118.71 1i0cA.13.13 60 -117.61 -117.61 1aojA.13.13 60 -117.55 -117.55 1b9oA.13.13 123 -113.21 -113.21 4aahA.14.14 571 -125.14 -125.14 1f37A.14.14 110 -123.86 -123.86 1i07A.14.14 60 -114.71 -114.71 1b9oA.14.14 123 -114.00 -114.00 1i0cA.14.14 60 -113.80 -113.80 1aojA.14.14 60 -113.66 -113.66 4aahA.15.15 571 -125.43 -125.43 1f37A.15.15 110 -121.89 -121.89 1b9oA.15.15 123 -115.28 -115.28 1hcxA.15.16 127 -114.93 -114.93 1i07A.15.15 60 -112.10 -112.10 1g1cA.15.16 99 -112.10 -112.10 4aahA.16.16 571 -126.07 -126.07 1f37A.16.16 110 -121.46 -121.46 1b9oA.16.16 123 -116.77 -116.77 1hcxA.16.17 127 -115.95 -115.95 1dy5A.16.16 124 -113.83 -113.83 3pmgA.16.16 561 -112.57 -112.57 4aahA.17.17 571 -125.65 -125.65 1f37A.17.17 110 -120.51 -120.51 1hcxA.17.18 127 -116.78 -116.78 1dy5A.17.17 124 -116.34 -116.34 1rnd.17.17 124 -115.01 -115.01 7rsa.17.17 124 -114.97 -114.97 4aahA.18.18 571 -124.98 -124.98 1f37A.18.18 110 -120.25 -120.25 1hcxA.18.19 127 -117.86 -117.86 1dy5A.18.18 124 -117.66 -117.66 1rnd.18.18 124 -116.45 -116.45 7rsa.18.18 124 -116.37 -116.37 4aahA.19.19 571 -123.88 -123.88 1f37A.19.19 110 -119.65 -119.65 1hcxA.19.20 127 -118.78 -118.78 1dy5A.19.19 124 -117.01 -117.01 1rnd.19.19 124 -115.90 -115.90 7rsa.19.19 124 -115.81 -115.81 4aahA.20.20 571 -122.69 -122.69 1hcxA.20.21 127 -119.89 -119.89 1f37A.20.20 110 -118.71 -118.71 8dfr.20.20 189 -115.13 -115.13 1dy5A.20.20 124 -114.22 -114.22 1rnd.20.20 124 -113.13 -113.13 4aahA.21.21 571 -120.76 -120.76 1hcxA.21.22 127 -120.21 -120.21 1f37A.21.21 110 -115.06 -115.06 8dfr.21.21 189 -114.18 -114.18 1alkA.21.22 449 -111.26 -111.26 1hcxA.21.21 127 -110.72 -110.72 1hcxA.22.23 127 -120.03 -120.03 4aahA.22.22 571 -119.33 -119.33 1f37A.22.22 110 -112.67 -112.67 1hcxA.22.22 127 -112.11 -112.11 1mjc.22.25 69 -111.98 -111.98 8dfr.22.22 189 -111.92 -111.92 1hcxA.23.24 127 -120.59 -120.59 4aahA.23.23 571 -118.56 -118.56 1mjc.23.26 69 -116.67 -116.67 3mefA.23.26 69 -114.38 -114.38 1hcxA.23.23 127 -113.01 -113.01 1e0fI.23.23 57 -110.26 -110.26 1hcxA.24.25 127 -121.73 -121.73 1mjc.24.27 69 -120.76 -120.76 4aahA.24.24 571 -117.78 -117.78 3mefA.24.27 69 -117.53 -117.53 1hcxA.24.24 127 -113.48 -113.48 1who.24.27 96 -113.43 -113.43 1mjc.25.28 69 -126.52 -126.52 1hcxA.25.26 127 -123.72 -123.72 3mefA.25.28 69 -122.09 -122.09 1who.25.28 96 -119.06 -119.06 4aahA.25.25 571 -117.09 -117.09 1e0fI.25.25 57 -115.51 -115.51 1mjc.26.29 69 -131.69 -131.69 1hcxA.26.27 127 -127.81 -127.81 3mefA.26.29 69 -126.42 -126.42 1who.26.29 96 -126.15 -126.15 1e0fI.26.26 57 -117.20 -117.20 1hcxA.26.26 127 -116.75 -116.75 1mjc.27.30 69 -135.42 -135.42 1who.27.30 96 -133.05 -133.05 1hcxA.27.28 127 -131.64 -131.64 3mefA.27.30 69 -128.90 -128.90 1hcxA.27.27 127 -121.70 -121.70 1qtwA.27.28 285 -119.72 -119.72 1mjc.28.31 69 -138.38 -138.38 1who.28.31 96 -137.81 -137.81 1hcxA.28.29 127 -133.32 -133.32 3mefA.28.31 69 -131.49 -131.49 1hcxA.28.28 127 -125.03 -125.03 1vdrA.28.32 162 -121.90 -121.90 1who.29.32 96 -138.85 -138.85 1mjc.29.32 69 -138.56 -138.56 1hcxA.29.30 127 -134.04 -134.04 3mefA.29.32 69 -133.16 -133.16 1hcxA.29.29 127 -126.14 -126.14 1vdrA.29.33 162 -125.49 -125.49 1who.30.33 96 -139.28 -139.28 1mjc.30.33 69 -138.61 -138.61 3mefA.30.33 69 -133.77 -133.77 1hcxA.30.31 127 -129.43 -129.43 1hcxA.30.30 127 -125.14 -125.14 1vdrA.30.34 162 -123.98 -123.98 1mjc.31.34 69 -138.34 -138.34 1who.31.34 96 -138.17 -138.17 3mefA.31.34 69 -134.68 -134.68 1hcxA.31.32 127 -125.99 -125.99 1hcxA.31.31 127 -125.61 -125.61 1qtwA.31.32 285 -124.88 -124.88 1mjc.32.35 69 -137.87 -137.87 1who.32.35 96 -137.62 -137.62 3mefA.32.35 69 -133.74 -133.74 1qtwA.32.33 285 -127.35 -127.35 1hcxA.32.32 127 -124.86 -124.86 1h8cA.32.36 82 -123.28 -123.28 1mjc.33.36 69 -136.40 -136.40 1who.33.36 96 -134.94 -134.94 3mefA.33.36 69 -131.24 -131.24 1qtwA.33.34 285 -128.62 -128.62 1h8cA.33.37 82 -125.38 -125.38 1e0fI.33.33 57 -124.58 -124.58 1mjc.34.37 69 -135.12 -135.12 1who.34.37 96 -133.21 -133.21 3mefA.34.37 69 -130.08 -130.08 1qtwA.34.35 285 -129.70 -129.70 1h8cA.34.38 82 -127.76 -127.76 1e0fI.34.34 57 -125.56 -125.56 1mjc.35.38 69 -132.01 -132.01 1qtwA.35.36 285 -128.96 -128.96 3mefA.35.38 69 -127.90 -127.90 1hcxA.35.38 127 -127.85 -127.85 1e0fI.35.35 57 -126.75 -126.75 1h8cA.35.39 82 -126.09 -126.09 1hcxA.36.39 127 -133.15 -133.15 1i07A.36.37 60 -128.58 -128.58 1mjc.36.39 69 -128.57 -128.57 1e0fI.36.36 57 -128.02 -128.02 1qtwA.36.37 285 -127.94 -127.94 1aojA.36.37 60 -126.89 -126.89 1hcxA.37.40 127 -137.88 -137.88 1i07A.37.38 60 -130.79 -130.79 1aojA.37.38 60 -128.94 -128.94 1e0fI.37.37 57 -128.73 -128.73 1mjc.37.40 69 -127.33 -127.33 1i0cA.37.38 60 -127.27 -127.27 1hcxA.38.41 127 -140.01 -140.01 1i07A.38.39 60 -135.08 -135.08 1aojA.38.39 60 -133.32 -133.32 1i0cA.38.39 60 -131.33 -131.33 1e0fI.38.38 57 -129.74 -129.74 1qtwA.38.39 285 -124.76 -124.76 1hcxA.39.42 127 -139.99 -139.99 1i07A.39.40 60 -134.63 -134.63 1aojA.39.40 60 -132.69 -132.69 1i0cA.39.40 60 -130.89 -130.89 1e0fI.39.39 57 -129.61 -129.61 1i07A.39.39 60 -122.88 -122.88 1hcxA.40.43 127 -139.11 -139.11 1i07A.40.41 60 -134.27 -134.27 1aojA.40.41 60 -132.28 -132.28 1i0cA.40.41 60 -130.57 -130.57 1e0fI.40.40 57 -129.72 -129.72 1i07A.40.40 60 -122.44 -122.44 1hcxA.41.44 127 -138.72 -138.72 1i07A.41.42 60 -134.41 -134.41 1aojA.41.42 60 -132.41 -132.41 1i0cA.41.42 60 -130.77 -130.77 1e0fI.41.41 57 -129.78 -129.78 1flp.41.41 142 -123.72 -123.72 1hcxA.42.45 127 -137.39 -137.39 1i07A.42.43 60 -133.94 -133.94 1aojA.42.43 60 -132.01 -132.01 1i0cA.42.43 60 -130.25 -130.25 1e0fI.42.42 57 -129.93 -129.93 1flp.42.42 142 -123.90 -123.90 1hcxA.43.46 127 -136.98 -136.98 1i07A.43.44 60 -134.77 -134.77 1aojA.43.44 60 -132.85 -132.85 1i0cA.43.44 60 -131.13 -131.13 1e0fI.43.43 57 -130.72 -130.72 1flp.43.43 142 -124.43 -124.43 1hcxA.44.47 127 -136.19 -136.19 1i07A.44.45 60 -134.31 -134.31 1aojA.44.45 60 -132.27 -132.27 1i0cA.44.45 60 -130.66 -130.66 1e0fI.44.44 57 -129.96 -129.96 1rthA.44.44 560 -124.22 -124.22 1hcxA.45.48 127 -134.67 -134.67 1i07A.45.46 60 -132.06 -132.06 1aojA.45.46 60 -129.54 -129.54 1e0fI.45.45 57 -129.42 -129.42 1i0cA.45.46 60 -128.30 -128.30 1rthA.45.45 560 -127.85 -127.85 1rthA.46.46 560 -132.03 -132.03 1hcxA.46.49 127 -131.92 -131.92 1e0fI.46.47 57 -131.18 -131.18 1e0fI.46.46 57 -127.55 -127.55 1who.46.51 96 -126.67 -126.67 1i07A.46.47 60 -125.50 -125.50