PFRMAT SS
TARGET T0151
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	   11 (1 ABCDEFGHIST )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0151.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 4
METHOD
MODEL 1
L E 0.285
R E 0.257
Y E 0.292
A E 0.309
T E 0.302
A E 0.323
K E 0.420
V E 0.339
N E 0.412
K I 0.209
A H 0.215
S B 0.270
R B 0.143
S D 0.164
G S 0.344
G C 0.289
F B 0.197
G C 0.200
S B 0.162
G D 0.174
S S 0.158
R S 0.135
P S 0.176
A C 0.198
P S 0.167
A H 0.162
Q S 0.280
T H 0.191
S H 0.276
S H 0.186
A C 0.277
S H 0.450
G H 0.344
D S 0.222
D E 0.228
P H 0.491
W B 0.538
G S 0.498
S B 0.181
A C 0.274
P B 0.201
A E 0.160
S G 0.172
G S 0.230
S E 0.199
F S 0.185
G C 0.201
G S 0.219
G C 0.217
D H 0.144
D S 0.257
E B 0.196
P B 0.262
P B 0.221
F S 0.223
END