// run from pce/casp5/t0151/1-115 SetSeed InfilePrefix Include define-score.script Time MakeGenericFragmentLibrary Time // The following alignments are believed to be good: OutFilePrefix decoys/ ClearConform ReadConformPDB decoys/T0151.try1-opt.pdb ConformFromSeq NameConform T0151-rand // ReportCost superimpose.rdb ReadFragmentAlignment 1qvcA/T0151-1qvcA-2track-protein-STR-local-adpstyle5.pw.a2m PrintAllalignmentsPDB T0151-1qvcA.pdb TryAllAlign shrink 0 min_keep_length 1 PrintAllConformPDB T0151.try1-1qvcA.super superpose ClearConform quit