SAM_T02 Results for T0151


When SAM_T02 finishes, you will see links to the following files below:
Description Link to file Date

Inputs

Submitted sequence(s) T0151.a2m
07/29/02
SAM_T02 multiple alignment in a2m format T0151.t2k.a2m.gz
07/29/02
SAM_T02 multiple alignment in pretty html format T0151.t2k.pa.html
07/29/02
SAM_T02 target hidden Markov model T0151.t2k-w0.5.mod
07/29/02

Secondary Structure Prediction

DSSP EBGHSTL structure prediction CASP format T0151.t2k.dssp-ebghstl
07/29/02
DSSP EBGHSTL structure prediction RDB format T0151.t2k.dssp-ebghstl.rdb
07/29/02
DSSP EBGHSTL structure prediction sequence format T0151.t2k.dssp-ebghstl.seq
07/29/02
Stride EBGHTL structure prediction CASP format T0151.t2k.stride-ebghtl
07/29/02
Stride EBGHTL structure prediction RDB format T0151.t2k.stride-ebghtl.rdb
07/29/02
Stride EBGHTL structure prediction sequence format T0151.t2k.stride-ebghtl.seq
07/29/02
Str structure prediction CASP format T0151.t2k.str
07/29/02
Str structure prediction RDB format T0151.t2k.str.rdb
07/29/02
Str structure prediction sequence format T0151.t2k.str.seq
07/29/02
Alpha angle prediction RDB format T0151.t2k.alpha.rdb
07/29/02
Alpha angle prediction sequence format T0151.t2k.alpha.seq
07/29/02
DSSP 3-value prediction RDB format T0151.t2k.dssp_ehl2.rdb
07/29/02

Sequence Logos

SAM_T02 multiple alignment in sequence logo format T0151.t2k.w0.5-logo.eps
07/29/02
DSSP EBGHSTL structure prediction in sequence logo format T0151.t2k.dssp-ebghstl-logo.eps
07/29/02
Stride EBGHTL structure prediction in sequence logo format T0151.t2k.stride-ebghtl-logo.eps
07/29/02
Str structure prediction in sequence logo format T0151.t2k.str-logo.eps
07/29/02
Alpha angle prediction in sequence logo format T0151.t2k.alpha-logo.eps
07/29/02
DSSP 3-value prediction in sequence logo format T0151.t2k.dssp_ehl2-logo.eps
07/29/02

Target model scores

Annotated amino acid/100-30-dssp-ebghstl two-track target model scores T0151.t2k-100-30-dssp-ebghstl-scores.html
07/29/02
Annotated amino acid/100-30-stride-ebghtl two-track target model scores T0151.t2k-100-30-stride-ebghtl-scores.html
07/29/02
Annotated amino acid/100-30-str two-track target model scores T0151.t2k-100-30-str-scores.html
07/29/02
Annotated amino acid/100-30-alpha two-track target model scores T0151.t2k-100-30-alpha-scores.html
07/29/02
Annotated amino acid/100-30-dssp_ehl2 two-track target model scores T0151.t2k-100-30-dssp_ehl2-scores.html
07/29/02
Annotated amino acid single-track target model scores of PDB T0151.t2k-w0.5-scores.html
07/29/02

Template model scores

Annotated template model scores T0151.template-lib-scores.html
07/29/02

Top Hits

Best scoring hits from all models T0151.t2k.best-scores.html
07/29/02

Alignments for Top Hits

T02 Many Alignments Summary T0151.t2k.many_alignments.html
07/29/02
T02 Top Models Summary T0151.t2k.top_reported_alignments.html
07/29/02

Undertaker (3d) files

Script for dssp coloring in rasmol T0151.t2k.dssp-color.rasmol
07/29/02
Script for stride coloring in rasmol T0151.t2k.stride-color.rasmol
07/29/02
Script for str coloring in rasmol T0151.t2k.str-color.rasmol
07/29/02
Script for alpha coloring in rasmol T0151.t2k.alpha-color.rasmol
07/29/02