PFRMAT SS TARGET T0151 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0151.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 132 METHOD MODEL 1 M C 0.986 A C 0.677 G C 0.420 D C 0.434 T C 0.475 T E 0.599 I E 0.942 T E 0.976 I E 0.975 V E 0.897 G E 0.702 N E 0.600 L E 0.466 T E 0.303 A S 0.373 D C 0.628 P T 0.509 E T 0.430 L E 0.384 R E 0.612 F E 0.639 T C 0.741 P T 0.685 S T 0.741 G S 0.751 A C 0.729 A E 0.648 V E 0.951 A E 0.987 N E 0.989 F E 0.989 T E 0.986 V E 0.950 A E 0.777 S E 0.544 T C 0.408 P C 0.383 R C 0.321 I C 0.386 Y C 0.310 D C 0.563 R T 0.615 Q T 0.681 T S 0.386 G C 0.454 E C 0.356 W E 0.400 K C 0.379 D C 0.417 G C 0.393 E C 0.432 A E 0.530 L E 0.686 F E 0.895 L E 0.916 R E 0.905 C E 0.909 N E 0.922 I E 0.748 W E 0.459 R H 0.367 E H 0.632 A H 0.855 A H 0.965 E H 0.979 N H 0.982 V H 0.981 A H 0.967 E H 0.920 S H 0.835 L H 0.643 T H 0.430 R T 0.461 G T 0.417 A C 0.574 R E 0.669 V E 0.959 I E 0.989 V E 0.986 S E 0.963 G E 0.903 R E 0.905 L E 0.878 K E 0.886 Q E 0.852 R E 0.619 S E 0.693 F E 0.715 E E 0.716 T C 0.502 R T 0.645 E T 0.776 G S 0.603 E C 0.531 K E 0.849 R E 0.882 T E 0.941 V E 0.931 I E 0.965 E E 0.989 V E 0.986 E E 0.989 V E 0.960 D E 0.901 E E 0.704 I C 0.543 G C 0.617 P C 0.721 S C 0.844 END