# TARGET T0150 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0150.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 77 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 G 0.008 0.005 0.021 0.522 0.131 0.314 2 S 0.007 0.003 0.019 0.627 0.092 0.252 3 V 0.003 0.002 0.018 0.789 0.059 0.129 4 D 0.002 0.002 0.030 0.893 0.031 0.043 5 F 0.001 0.001 0.016 0.929 0.025 0.028 6 A 0.001 0.001 0.005 0.969 0.013 0.012 7 F 0.001 0.001 0.002 0.977 0.009 0.010 8 E 0.001 0.001 0.001 0.987 0.005 0.006 9 L 0.001 0.001 0.001 0.990 0.004 0.004 10 R 0.001 0.001 0.002 0.986 0.007 0.004 11 K 0.001 0.001 0.002 0.988 0.006 0.003 12 A 0.001 0.001 0.003 0.981 0.009 0.006 13 Q 0.001 0.001 0.005 0.975 0.010 0.009 14 D 0.003 0.001 0.008 0.950 0.020 0.018 15 T 0.005 0.001 0.011 0.861 0.054 0.068 16 G 0.010 0.001 0.004 0.038 0.251 0.695 17 K 0.149 0.006 0.015 0.021 0.328 0.479 18 I 0.650 0.036 0.010 0.020 0.171 0.113 19 V 0.726 0.012 0.008 0.038 0.158 0.058 20 M 0.474 0.010 0.014 0.109 0.303 0.090 21 G 0.104 0.011 0.029 0.377 0.415 0.064 22 A 0.013 0.001 0.017 0.865 0.091 0.014 23 R 0.005 0.001 0.005 0.970 0.014 0.005 24 K 0.008 0.001 0.002 0.980 0.005 0.003 25 S 0.009 0.001 0.001 0.985 0.002 0.003 26 I 0.010 0.001 0.001 0.988 0.001 0.001 27 Q 0.005 0.001 0.001 0.993 0.001 0.001 28 Y 0.001 0.001 0.002 0.994 0.002 0.001 29 A 0.001 0.001 0.002 0.991 0.004 0.001 30 K 0.001 0.001 0.004 0.987 0.006 0.002 31 M 0.002 0.001 0.011 0.912 0.048 0.027 32 G 0.003 0.001 0.008 0.137 0.222 0.630 33 G 0.021 0.001 0.004 0.005 0.205 0.765 34 A 0.280 0.002 0.002 0.002 0.210 0.504 35 K 0.791 0.008 0.002 0.002 0.055 0.143 36 L 0.989 0.001 0.001 0.001 0.002 0.007 37 I 0.996 0.001 0.001 0.001 0.001 0.003 38 I 0.986 0.001 0.001 0.001 0.002 0.010 39 V 0.956 0.001 0.002 0.002 0.010 0.029 40 A 0.769 0.006 0.007 0.005 0.069 0.144 41 R 0.234 0.012 0.005 0.006 0.205 0.538 42 N 0.075 0.025 0.004 0.002 0.304 0.591 43 A 0.030 0.033 0.006 0.006 0.373 0.552 44 R 0.011 0.010 0.008 0.016 0.652 0.303 45 P 0.004 0.003 0.160 0.223 0.544 0.067 46 D 0.007 0.003 0.146 0.366 0.396 0.083 47 I 0.022 0.009 0.235 0.489 0.217 0.028 48 K 0.045 0.014 0.097 0.577 0.124 0.144 49 E 0.063 0.017 0.064 0.615 0.103 0.139 50 D 0.043 0.015 0.030 0.580 0.060 0.271 51 I 0.012 0.002 0.006 0.926 0.014 0.040 52 E 0.004 0.001 0.005 0.964 0.016 0.011 53 Y 0.003 0.001 0.004 0.978 0.011 0.005 54 Y 0.002 0.001 0.004 0.980 0.011 0.002 55 A 0.001 0.001 0.005 0.977 0.014 0.003 56 R 0.001 0.001 0.008 0.962 0.022 0.006 57 L 0.002 0.001 0.009 0.921 0.046 0.022 58 S 0.003 0.001 0.010 0.743 0.099 0.143 59 G 0.001 0.001 0.001 0.003 0.075 0.920 60 I 0.022 0.004 0.001 0.001 0.119 0.853 61 P 0.138 0.001 0.001 0.001 0.087 0.772 62 V 0.911 0.005 0.001 0.001 0.018 0.063 63 Y 0.978 0.001 0.001 0.001 0.005 0.015 64 E 0.972 0.001 0.001 0.001 0.006 0.019 65 F 0.943 0.001 0.001 0.001 0.013 0.041 66 E 0.532 0.017 0.003 0.006 0.147 0.295 67 G 0.103 0.014 0.003 0.013 0.286 0.581 68 T 0.043 0.012 0.003 0.018 0.308 0.616 69 S 0.020 0.006 0.016 0.760 0.113 0.085 70 V 0.021 0.002 0.009 0.905 0.045 0.018 71 E 0.029 0.003 0.006 0.911 0.042 0.010 72 L 0.020 0.002 0.006 0.920 0.042 0.009 73 G 0.027 0.004 0.011 0.830 0.106 0.022 74 T 0.026 0.002 0.032 0.757 0.158 0.025 75 L 0.024 0.003 0.028 0.744 0.157 0.043 76 L 0.017 0.011 0.030 0.683 0.156 0.102 77 G 0.030 0.004 0.004 0.032 0.362 0.568 78 R 0.099 0.018 0.005 0.012 0.348 0.518 79 P 0.240 0.026 0.003 0.002 0.199 0.529 80 H 0.465 0.017 0.002 0.004 0.127 0.386 81 T 0.582 0.006 0.002 0.002 0.046 0.363 82 V 0.875 0.003 0.001 0.002 0.011 0.109 83 S 0.979 0.001 0.001 0.001 0.004 0.015 84 A 0.987 0.001 0.001 0.001 0.002 0.010 85 L 0.988 0.001 0.001 0.001 0.003 0.008 86 A 0.972 0.001 0.001 0.001 0.007 0.019 87 V 0.961 0.002 0.001 0.001 0.013 0.023 88 V 0.852 0.020 0.001 0.001 0.040 0.087 89 D 0.265 0.020 0.002 0.003 0.471 0.239 90 P 0.008 0.002 0.050 0.062 0.802 0.076 91 G 0.003 0.002 0.103 0.127 0.717 0.047 92 E 0.003 0.005 0.189 0.387 0.391 0.025 93 S 0.003 0.001 0.050 0.749 0.112 0.084 94 R 0.010 0.003 0.057 0.792 0.101 0.037 95 I 0.016 0.004 0.068 0.779 0.101 0.031 96 L 0.041 0.006 0.051 0.776 0.095 0.032 97 A 0.043 0.003 0.045 0.742 0.128 0.038 98 L 0.033 0.002 0.031 0.729 0.134 0.072 99 G 0.029 0.009 0.031 0.498 0.196 0.236 100 G 0.010 0.008 0.067 0.260 0.215 0.440 101 K 0.007 0.007 0.050 0.188 0.181 0.568 102 E 0.001 0.001 0.006 0.028 0.042 0.924