# TARGET T0150 # Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 7 (1 EBGHSTL ) # The input amino acid frequencies were determined from # alignment T0150.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 77 # Pos AA E B G H S T C 10N 1S 5N 5N 5N 5N 5N 5N 5N 1 G 0.001 0.001 0.001 0.006 0.001 0.001 0.992 2 S 0.007 0.008 0.011 0.632 0.002 0.028 0.311 3 V 0.003 0.002 0.018 0.774 0.045 0.061 0.096 4 D 0.002 0.003 0.012 0.841 0.026 0.061 0.056 5 F 0.001 0.001 0.005 0.957 0.005 0.019 0.013 6 A 0.001 0.001 0.002 0.988 0.003 0.004 0.003 7 F 0.001 0.001 0.001 0.994 0.001 0.003 0.001 8 E 0.001 0.001 0.001 0.997 0.001 0.002 0.001 9 L 0.001 0.001 0.001 0.997 0.001 0.002 0.001 10 R 0.001 0.001 0.001 0.997 0.001 0.002 0.001 11 K 0.001 0.001 0.001 0.996 0.001 0.003 0.001 12 A 0.001 0.001 0.001 0.995 0.001 0.002 0.001 13 Q 0.001 0.001 0.003 0.982 0.001 0.012 0.001 14 D 0.001 0.001 0.005 0.912 0.005 0.073 0.004 15 T 0.001 0.001 0.003 0.273 0.012 0.708 0.003 16 G 0.001 0.001 0.001 0.013 0.033 0.934 0.018 17 K 0.032 0.010 0.005 0.018 0.098 0.068 0.768 18 I 0.511 0.069 0.013 0.041 0.042 0.040 0.283 19 V 0.507 0.016 0.013 0.073 0.054 0.060 0.278 20 M 0.301 0.015 0.015 0.175 0.113 0.159 0.221 21 G 0.102 0.009 0.006 0.230 0.210 0.190 0.254 22 A 0.011 0.001 0.006 0.825 0.042 0.058 0.058 23 R 0.001 0.001 0.003 0.969 0.008 0.013 0.006 24 K 0.001 0.001 0.002 0.984 0.004 0.007 0.004 25 S 0.001 0.001 0.001 0.991 0.001 0.004 0.002 26 I 0.001 0.001 0.001 0.994 0.001 0.002 0.001 27 Q 0.001 0.001 0.001 0.994 0.001 0.002 0.002 28 Y 0.001 0.001 0.001 0.994 0.001 0.003 0.001 29 A 0.001 0.001 0.001 0.990 0.001 0.006 0.002 30 K 0.001 0.001 0.002 0.953 0.002 0.040 0.003 31 M 0.001 0.001 0.002 0.272 0.010 0.712 0.004 32 G 0.001 0.001 0.001 0.015 0.051 0.901 0.030 33 G 0.019 0.010 0.005 0.007 0.221 0.132 0.605 34 A 0.172 0.007 0.001 0.001 0.033 0.003 0.783 35 K 0.693 0.001 0.001 0.001 0.109 0.001 0.195 36 L 0.988 0.001 0.001 0.001 0.004 0.001 0.005 37 I 0.996 0.001 0.001 0.001 0.001 0.001 0.003 38 I 0.996 0.001 0.001 0.001 0.001 0.001 0.002 39 V 0.974 0.001 0.001 0.005 0.001 0.001 0.018 40 A 0.519 0.003 0.010 0.020 0.070 0.022 0.355 41 R 0.134 0.004 0.034 0.058 0.447 0.070 0.252 42 N 0.034 0.022 0.057 0.077 0.373 0.157 0.281 43 A 0.014 0.023 0.014 0.067 0.479 0.058 0.345 44 R 0.007 0.006 0.005 0.045 0.232 0.035 0.671 45 P 0.001 0.001 0.075 0.769 0.030 0.110 0.015 46 D 0.001 0.001 0.096 0.808 0.018 0.066 0.011 47 I 0.001 0.001 0.143 0.804 0.009 0.025 0.016 48 K 0.002 0.001 0.022 0.951 0.003 0.013 0.008 49 E 0.005 0.001 0.019 0.917 0.004 0.047 0.009 50 D 0.003 0.002 0.013 0.908 0.005 0.059 0.011 51 I 0.002 0.002 0.003 0.968 0.006 0.008 0.012 52 E 0.001 0.001 0.002 0.989 0.002 0.003 0.004 53 Y 0.002 0.001 0.001 0.991 0.002 0.003 0.002 54 Y 0.001 0.001 0.001 0.994 0.001 0.003 0.001 55 A 0.001 0.001 0.001 0.992 0.001 0.003 0.001 56 R 0.002 0.001 0.002 0.978 0.002 0.013 0.003 57 L 0.002 0.001 0.006 0.879 0.006 0.104 0.004 58 S 0.001 0.001 0.004 0.163 0.013 0.817 0.003 59 G 0.001 0.001 0.001 0.004 0.024 0.949 0.022 60 I 0.054 0.006 0.001 0.001 0.103 0.008 0.827 61 P 0.326 0.011 0.001 0.001 0.063 0.006 0.592 62 V 0.828 0.008 0.002 0.001 0.021 0.005 0.135 63 Y 0.947 0.003 0.001 0.001 0.007 0.001 0.041 64 E 0.953 0.004 0.001 0.001 0.005 0.001 0.035 65 F 0.892 0.005 0.001 0.001 0.010 0.003 0.088 66 E 0.542 0.009 0.004 0.004 0.083 0.038 0.321 67 G 0.193 0.017 0.007 0.006 0.364 0.143 0.269 68 T 0.080 0.026 0.005 0.015 0.326 0.049 0.498 69 S 0.005 0.003 0.083 0.755 0.056 0.064 0.035 70 V 0.003 0.002 0.073 0.847 0.018 0.046 0.012 71 E 0.004 0.002 0.054 0.880 0.009 0.044 0.008 72 L 0.004 0.001 0.027 0.914 0.005 0.037 0.011 73 G 0.009 0.002 0.063 0.817 0.014 0.080 0.015 74 T 0.019 0.003 0.074 0.801 0.020 0.068 0.015 75 L 0.012 0.004 0.059 0.777 0.026 0.107 0.015 76 L 0.014 0.016 0.024 0.360 0.051 0.507 0.030 77 G 0.008 0.003 0.008 0.022 0.173 0.586 0.200 78 R 0.033 0.009 0.006 0.019 0.429 0.081 0.422 79 P 0.151 0.021 0.005 0.005 0.170 0.065 0.582 80 H 0.344 0.014 0.005 0.003 0.172 0.016 0.446 81 T 0.631 0.017 0.004 0.001 0.115 0.006 0.226 82 V 0.899 0.007 0.002 0.001 0.016 0.001 0.075 83 S 0.976 0.001 0.001 0.001 0.005 0.001 0.017 84 A 0.990 0.001 0.001 0.001 0.001 0.001 0.008 85 L 0.993 0.001 0.001 0.001 0.001 0.001 0.005 86 A 0.987 0.001 0.001 0.001 0.002 0.001 0.010 87 V 0.937 0.002 0.001 0.001 0.010 0.001 0.049 88 V 0.792 0.026 0.001 0.001 0.027 0.002 0.151 89 D 0.292 0.010 0.002 0.001 0.051 0.008 0.636 90 P 0.006 0.002 0.043 0.012 0.125 0.784 0.029 91 G 0.003 0.003 0.029 0.013 0.140 0.773 0.039 92 E 0.009 0.006 0.134 0.391 0.111 0.144 0.205 93 S 0.005 0.004 0.039 0.801 0.036 0.054 0.061 94 R 0.008 0.002 0.066 0.801 0.026 0.070 0.026 95 I 0.008 0.002 0.054 0.863 0.011 0.036 0.026 96 L 0.009 0.004 0.047 0.848 0.014 0.050 0.029 97 A 0.016 0.002 0.065 0.691 0.023 0.172 0.030 98 L 0.010 0.002 0.057 0.657 0.024 0.206 0.044 99 G 0.013 0.010 0.065 0.458 0.126 0.134 0.194 100 G 0.023 0.008 0.064 0.349 0.100 0.183 0.273 101 K 0.011 0.007 0.044 0.254 0.012 0.173 0.500 102 E 0.001 0.001 0.001 0.008 0.002 0.002 0.987