PFRMAT SS TARGET T0150 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0150.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 77 METHOD MODEL 1 G C 0.992 S H 0.632 V H 0.774 D H 0.841 F H 0.957 A H 0.988 F H 0.994 E H 0.997 L H 0.997 R H 0.997 K H 0.996 A H 0.995 Q H 0.982 D H 0.912 T T 0.708 G T 0.934 K C 0.768 I E 0.511 V E 0.507 M E 0.301 G C 0.254 A H 0.825 R H 0.969 K H 0.984 S H 0.991 I H 0.994 Q H 0.994 Y H 0.994 A H 0.990 K H 0.953 M T 0.712 G T 0.901 G C 0.605 A C 0.783 K E 0.693 L E 0.988 I E 0.996 I E 0.996 V E 0.974 A E 0.519 R S 0.447 N S 0.373 A S 0.479 R C 0.671 P H 0.769 D H 0.808 I H 0.804 K H 0.951 E H 0.917 D H 0.908 I H 0.968 E H 0.989 Y H 0.991 Y H 0.994 A H 0.992 R H 0.978 L H 0.879 S T 0.817 G T 0.949 I C 0.827 P C 0.592 V E 0.828 Y E 0.947 E E 0.953 F E 0.892 E E 0.542 G S 0.364 T C 0.498 S H 0.755 V H 0.847 E H 0.880 L H 0.914 G H 0.817 T H 0.801 L H 0.777 L T 0.507 G T 0.586 R S 0.429 P C 0.582 H C 0.446 T E 0.631 V E 0.899 S E 0.976 A E 0.990 L E 0.993 A E 0.987 V E 0.937 V E 0.792 D C 0.636 P T 0.784 G T 0.773 E H 0.391 S H 0.801 R H 0.801 I H 0.863 L H 0.848 A H 0.691 L H 0.657 G H 0.458 G H 0.349 K C 0.500 E C 0.987 END