PFRMAT SS
TARGET T0149
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0149.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 106
METHOD
MODEL 1
M C 0.691
N C 0.728
P C 0.679
I C 0.549
A C 0.512
V E 0.897
T E 0.973
L E 0.981
L E 0.896
T E 0.679
G C 0.495
F T 0.387
L T 0.590
G T 0.718
A T 0.714
G C 0.589
K H 0.674
T H 0.880
T H 0.983
L H 0.991
L H 0.989
R H 0.990
H H 0.988
I H 0.976
L H 0.923
N H 0.803
E H 0.469
Q T 0.802
H T 0.890
G T 0.902
Y T 0.710
K E 0.640
I E 0.984
A E 0.995
V E 0.996
I E 0.985
E E 0.923
N E 0.465
E T 0.625
F T 0.652
G T 0.642
E T 0.400
V E 0.416
S C 0.398
V C 0.374
D H 0.382
D H 0.811
Q H 0.904
L H 0.918
I H 0.925
G H 0.919
D H 0.738
R H 0.470
A C 0.763
T C 0.667
Q C 0.442
I E 0.890
K E 0.938
T E 0.929
L E 0.751
T T 0.375
N T 0.603
G T 0.606
C E 0.357
I E 0.442
C E 0.388
C T 0.377
S C 0.438
R T 0.355
S H 0.528
N H 0.717
E H 0.821
L H 0.915
E H 0.956
D H 0.963
A H 0.977
L H 0.985
L H 0.979
D H 0.969
L H 0.945
L H 0.881
D H 0.800
N H 0.709
L H 0.728
D H 0.618
K H 0.409
G T 0.382
N T 0.481
I T 0.441
Q C 0.519
F C 0.490
D C 0.576
R E 0.976
L E 0.996
V E 0.996
I E 0.979
E E 0.769
C C 0.555
T C 0.570
G T 0.452
M T 0.578
A T 0.569
D T 0.604
P H 0.455
G H 0.504
P H 0.654
I H 0.817
I H 0.837
Q H 0.794
T H 0.813
F H 0.755
F H 0.633
S H 0.429
H T 0.367
E T 0.424
V T 0.462
L T 0.486
C T 0.505
Q T 0.407
R T 0.407
Y T 0.331
L E 0.368
L T 0.364
D T 0.400
G E 0.631
V E 0.926
I E 0.977
A E 0.976
L E 0.981
V E 0.952
D E 0.707
A T 0.298
V G 0.411
H G 0.437
A T 0.340
D H 0.381
E T 0.360
Q T 0.381
M T 0.364
N H 0.375
Q H 0.495
F H 0.626
T H 0.690
I H 0.733
A H 0.814
Q H 0.837
S H 0.783
Q H 0.725
V H 0.628
G H 0.516
Y T 0.513
A T 0.739
D T 0.704
R E 0.875
I E 0.979
L E 0.993
L E 0.972
T E 0.720
K T 0.449
T T 0.469
D T 0.441
V T 0.467
A C 0.432
G C 0.554
E H 0.427
A H 0.624
E H 0.798
K H 0.931
L H 0.975
H H 0.985
E H 0.985
R H 0.989
L H 0.981
A H 0.964
R H 0.888
I H 0.709
N T 0.688
A T 0.838
R T 0.870
A T 0.726
P E 0.483
V E 0.806
Y E 0.858
T E 0.768
V E 0.496
T T 0.523
H T 0.655
G T 0.682
D T 0.497
I C 0.448
D C 0.578
L G 0.490
G G 0.623
L G 0.673
L H 0.492
F H 0.481
N C 0.474
T C 0.368
N T 0.370
G T 0.290
F C 0.315
M C 0.350
L C 0.372
E T 0.459
E T 0.518
N T 0.439
V T 0.371
V T 0.353
S T 0.409
T T 0.426
K T 0.485
P T 0.503
R T 0.482
F T 0.431
H C 0.412
F C 0.396
I T 0.392
A T 0.379
D T 0.390
K T 0.405
Q T 0.528
N T 0.548
D T 0.484
I C 0.413
S C 0.403
S E 0.723
I E 0.859
V E 0.893
V E 0.865
E E 0.741
L E 0.439
D C 0.473
Y C 0.510
P C 0.641
V C 0.689
D C 0.820
I H 0.914
S H 0.949
E H 0.961
V H 0.983
S H 0.989
R H 0.977
V H 0.980
M H 0.976
E H 0.945
N H 0.792
L H 0.697
L H 0.673
L H 0.608
E H 0.505
S H 0.409
A T 0.535
D T 0.541
K T 0.421
L E 0.603
L E 0.871
R E 0.955
Y E 0.941
K E 0.873
G E 0.853
M E 0.941
L E 0.949
W E 0.898
I E 0.686
D T 0.688
G T 0.791
E T 0.731
P T 0.554
N E 0.499
R E 0.822
L E 0.922
L E 0.971
F E 0.961
Q E 0.895
G E 0.781
V E 0.670
Q E 0.514
R E 0.511
L E 0.602
Y E 0.606
S E 0.485
A C 0.396
D C 0.407
W T 0.442
D T 0.475
R T 0.498
P T 0.387
W T 0.387
G T 0.545
D T 0.602
E T 0.655
K T 0.512
P C 0.488
H C 0.633
S C 0.565
T E 0.838
M E 0.978
V E 0.991
F E 0.985
I E 0.918
G E 0.396
I T 0.486
Q T 0.534
L C 0.468
P C 0.822
E H 0.939
E H 0.964
E H 0.980
I H 0.985
R H 0.987
A H 0.946
A H 0.931
F H 0.951
A H 0.891
G H 0.812
L H 0.695
R H 0.449
K C 0.984
END