PFRMAT SS
TARGET T0148
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0148.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 17
METHOD
MODEL 1
M C 0.999
P C 0.912
S C 0.677
F C 0.741
D C 0.542
I C 0.381
V C 0.520
S C 0.552
E C 0.427
I C 0.539
T C 0.668
L H 0.883
H H 0.973
E H 0.981
V H 0.987
R H 0.991
N H 0.989
A H 0.992
V H 0.995
E H 0.991
N H 0.986
A H 0.981
N H 0.958
R H 0.893
V H 0.791
L H 0.629
S H 0.481
T T 0.347
R C 0.358
Y C 0.421
D C 0.502
F C 0.377
R T 0.668
G T 0.666
V C 0.582
E C 0.493
A E 0.713
V E 0.879
I E 0.941
E E 0.959
L E 0.793
N C 0.405
E T 0.574
K T 0.774
N T 0.328
E E 0.729
T E 0.961
I E 0.982
K E 0.978
I E 0.943
T E 0.801
T C 0.527
E S 0.396
S C 0.340
D H 0.459
F H 0.669
Q H 0.800
L H 0.932
E H 0.940
Q H 0.959
L H 0.991
I H 0.996
E H 0.996
I H 0.996
L H 0.994
I H 0.983
G H 0.976
S H 0.976
C H 0.960
I H 0.947
K H 0.866
R T 0.703
G T 0.896
I C 0.786
E C 0.847
H G 0.506
S G 0.516
S G 0.560
L G 0.223
D C 0.342
I C 0.326
P T 0.430
A C 0.272
E C 0.353
S C 0.288
E C 0.219
H T 0.261
H T 0.285
G S 0.334
K C 0.442
L E 0.635
Y E 0.823
S E 0.906
K E 0.956
E E 0.978
I E 0.964
K E 0.965
L E 0.865
K E 0.606
Q T 0.241
G T 0.342
I C 0.389
E C 0.613
T H 0.787
E H 0.853
M H 0.917
A H 0.941
K H 0.965
K H 0.970
I H 0.986
T H 0.987
K H 0.979
L H 0.970
V H 0.969
K H 0.928
D H 0.817
S H 0.510
K T 0.849
I C 0.718
K E 0.369
V E 0.607
Q E 0.646
T E 0.754
Q E 0.717
I E 0.565
Q T 0.312
G T 0.652
E T 0.351
Q E 0.806
V E 0.906
R E 0.894
V E 0.708
T C 0.423
G S 0.420
K C 0.311
S C 0.323
R H 0.527
D H 0.713
D H 0.802
L H 0.984
Q H 0.991
A H 0.994
V H 0.994
I H 0.990
Q H 0.962
L H 0.862
V H 0.690
K H 0.329
S T 0.268
A T 0.353
E T 0.353
L T 0.323
G T 0.476
Q S 0.617
P C 0.653
F E 0.408
Q E 0.490
F E 0.418
N E 0.359
N C 0.271
F C 0.349
R C 0.631
D C 0.955
END