Best Alignments for T0147_twice

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0147_twice-2mnr-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0147_twice-2mnr-2track-protein-STR-local-adpstyle5.pw.al 2.2846e-02 2mnr c.1.11.2
T0147_twice-1ubpC-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0147_twice-1ubpC-2track-protein-STR-local-adpstyle5.pw.al 4.7770e-02 1ubpC b.92.1.1
T0147_twice-1a4mA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0147_twice-1a4mA-2track-protein-STR-local-adpstyle5.pw.al 6.3663e-02 1a4mA c.1.9.1
T0147_twice-1gdeA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0147_twice-1gdeA-2track-protein-STR-local-adpstyle5.pw.al 7.6048e-02 c.67.1.1
T0147_twice-6acn-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0147_twice-6acn-2track-protein-STR-local-adpstyle5.pw.al 1.2308e-01 1amj c.83.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001