PFRMAT SS TARGET T0147 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0147.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 80 METHOD MODEL 1 M C 0.999 Y C 0.776 P C 0.456 V C 0.507 D E 0.558 L E 0.804 H E 0.869 M E 0.870 H E 0.788 T E 0.570 V E 0.478 A C 0.486 S C 0.556 T T 0.515 H T 0.462 A C 0.424 Y C 0.569 S S 0.442 T C 0.654 L H 0.978 S H 0.989 D H 0.994 Y H 0.997 I H 0.995 A H 0.993 Q H 0.995 A H 0.994 K H 0.988 Q H 0.920 K T 0.730 G T 0.908 I C 0.962 K S 0.417 L E 0.988 F E 0.998 A E 0.998 I E 0.961 T E 0.579 D C 0.530 H C 0.425 G S 0.297 P C 0.292 D C 0.276 M C 0.288 E C 0.321 D H 0.363 A H 0.470 P H 0.525 H H 0.661 H H 0.786 W H 0.845 H H 0.905 F H 0.928 I H 0.915 N H 0.908 M H 0.894 R H 0.842 I H 0.785 W H 0.684 P H 0.673 R H 0.599 V H 0.469 V C 0.282 D T 0.509 G T 0.613 V C 0.638 G E 0.620 I E 0.786 L E 0.687 R E 0.620 G E 0.773 I E 0.880 E E 0.924 A E 0.876 N E 0.905 I E 0.875 K E 0.810 N C 0.459 V T 0.720 D T 0.699 G C 0.340 E E 0.590 I E 0.748 D E 0.635 C E 0.463 S C 0.434 G H 0.308 K H 0.318 M H 0.355 F H 0.439 D H 0.353 S H 0.430 L H 0.310 D C 0.335 L E 0.588 I E 0.747 I E 0.838 A E 0.851 G E 0.813 F E 0.647 H E 0.529 E E 0.359 P E 0.300 V C 0.270 F C 0.394 A T 0.275 P T 0.339 H C 0.309 D C 0.410 K H 0.492 A H 0.567 T H 0.679 N H 0.851 T H 0.947 Q H 0.975 A H 0.981 M H 0.987 I H 0.987 A H 0.985 T H 0.973 I H 0.947 A H 0.829 S H 0.494 G T 0.457 N T 0.533 V C 0.562 H C 0.439 I E 0.751 I E 0.704 S E 0.523 H C 0.457 P T 0.351 G T 0.410 N C 0.232 P H 0.340 K H 0.336 Y H 0.320 E H 0.310 I H 0.290 D C 0.340 V H 0.329 K T 0.359 A H 0.331 V H 0.434 A H 0.491 E H 0.525 A H 0.934 A H 0.969 A H 0.978 K H 0.978 H H 0.966 Q H 0.946 V H 0.944 A H 0.929 L H 0.914 E H 0.841 I H 0.470 N T 0.685 N C 0.554 S C 0.406 S E 0.270 F C 0.278 L C 0.276 H C 0.335 S C 0.306 R C 0.510 K T 0.374 G T 0.337 S C 0.272 E C 0.377 D C 0.476 N C 0.499 C H 0.546 R H 0.980 E H 0.990 V H 0.996 A H 0.998 A H 0.996 A H 0.996 V H 0.996 R H 0.990 D H 0.949 A T 0.692 G T 0.957 G C 0.986 W E 0.507 V E 0.920 A E 0.966 L E 0.962 G E 0.717 S C 0.586 D C 0.335 S T 0.361 H S 0.292 T C 0.474 A C 0.254 F T 0.371 T T 0.226 M H 0.493 G H 0.547 E H 0.705 F H 0.942 E H 0.985 E H 0.990 C H 0.996 L H 0.998 K H 0.998 I H 0.998 L H 0.997 D H 0.991 A H 0.930 V T 0.519 D T 0.793 F C 0.932 P C 0.917 P G 0.361 E G 0.350 R H 0.393 I H 0.469 L H 0.415 N H 0.346 V C 0.345 S C 0.526 P H 0.381 R H 0.710 R H 0.798 L H 0.872 L H 0.937 N H 0.950 F H 0.965 L H 0.965 E H 0.942 S H 0.833 R T 0.478 G T 0.367 M C 0.616 A C 0.533 P C 0.474 I H 0.438 A H 0.515 E H 0.500 F H 0.436 A C 0.320 D C 0.601 L C 0.999 END