Best Alignments for T0146

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment	AL alignment	E-value	FSSP rep	SCOP Domain(s)
T0146-1dq3A-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0146-1dq3A-2track-protein-STR-local-adpstyle5.pw.al	5.8142e-01	1dq3A	d.95.2.2
T0146-1agdA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0146-1agdA-2track-protein-STR-local-adpstyle5.pw.al	1.1748e+00	1agdA	b.1.1.2
T0146-1f15B-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0146-1f15B-2track-protein-STR-local-adpstyle5.pw.al	1.6070e+00	1f15B	b.10.1.2
T0146-1a7cA-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0146-1a7cA-2track-protein-STR-local-adpstyle5.pw.al	2.6333e+00	1sek	e.1.1.1
T0146-1kl9A-2track-protein-STR-local-adpstyle5.pw.a2m.gz	T0146-1kl9A-2track-protein-STR-local-adpstyle5.pw.al	5.3192e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001