PFRMAT SS
TARGET T0146
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0146.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 50
METHOD
MODEL 1
A C 0.904
F C 0.746
T C 0.498
P C 0.452
F T 0.483
P T 0.482
P C 0.437
R C 0.406
Q T 0.344
P C 0.321
T C 0.315
A T 0.272
S T 0.307
A T 0.350
R T 0.451
L T 0.482
P T 0.424
L E 0.419
T E 0.862
L E 0.954
M E 0.957
T E 0.835
L T 0.611
D T 0.705
D T 0.646
W T 0.524
A E 0.739
L E 0.970
A E 0.987
T E 0.978
I E 0.913
T C 0.450
G C 0.549
A T 0.408
D T 0.390
S H 0.656
E H 0.870
K H 0.889
Y H 0.898
M H 0.937
Q H 0.933
G H 0.929
Q H 0.855
V H 0.834
T H 0.684
A H 0.493
D H 0.373
V G 0.390
S G 0.484
Q G 0.425
M T 0.368
A T 0.538
E T 0.521
D T 0.563
Q T 0.481
H E 0.620
L E 0.789
L E 0.795
A E 0.794
A E 0.840
H E 0.841
C E 0.687
D T 0.779
A T 0.955
K T 0.968
G T 0.863
K E 0.653
M E 0.876
W E 0.921
S E 0.864
N E 0.804
L E 0.883
R E 0.962
L E 0.976
F E 0.974
R E 0.953
D E 0.785
G T 0.805
D T 0.856
G E 0.478
F E 0.920
A E 0.973
W E 0.987
I E 0.964
E E 0.647
R C 0.559
R T 0.474
S T 0.425
V T 0.433
R H 0.372
E H 0.716
P H 0.796
Q H 0.857
L H 0.956
T H 0.963
E H 0.962
L H 0.952
K H 0.945
K H 0.803
Y H 0.438
A C 0.298
V E 0.302
F C 0.334
S C 0.370
K E 0.677
V E 0.786
T E 0.856
I E 0.844
A E 0.725
P C 0.432
D C 0.618
D C 0.519
E H 0.616
R H 0.728
V H 0.739
L H 0.716
L H 0.641
G H 0.701
V H 0.711
A H 0.679
G C 0.390
F C 0.494
Q H 0.427
A H 0.805
R H 0.849
A H 0.877
A H 0.876
L H 0.858
A H 0.831
N H 0.817
L H 0.810
F H 0.554
S H 0.446
E C 0.421
L C 0.477
P C 0.499
S T 0.458
K T 0.401
E T 0.353
K T 0.282
Q H 0.288
V E 0.271
V T 0.320
K T 0.435
E T 0.462
G C 0.352
A E 0.690
T E 0.872
T E 0.897
L E 0.862
L E 0.703
W E 0.458
F T 0.379
E T 0.399
H T 0.393
P T 0.522
A T 0.700
E T 0.710
R T 0.640
F E 0.525
L E 0.811
I E 0.917
V E 0.900
T E 0.608
D C 0.512
E T 0.437
A T 0.355
T H 0.375
A H 0.760
N H 0.891
M H 0.910
L H 0.918
T H 0.901
D H 0.908
K H 0.876
L H 0.842
R H 0.723
G H 0.573
E H 0.380
A C 0.447
E T 0.518
L T 0.497
N T 0.481
N C 0.713
S H 0.767
Q H 0.847
Q H 0.884
W H 0.901
L H 0.896
A H 0.946
L H 0.899
N H 0.857
I H 0.815
E H 0.830
A H 0.795
G C 0.768
F C 0.767
P C 0.577
V C 0.384
I C 0.484
D C 0.402
A T 0.319
A T 0.376
N T 0.506
S T 0.597
G T 0.569
Q T 0.476
F C 0.401
I C 0.385
P H 0.692
Q H 0.672
A H 0.612
T H 0.649
N C 0.410
L E 0.329
Q E 0.421
A E 0.549
L E 0.424
G E 0.411
G E 0.740
I E 0.816
S E 0.846
F E 0.624
K T 0.427
K T 0.606
G T 0.651
C C 0.443
Y C 0.329
T E 0.337
G C 0.326
Q H 0.610
E H 0.714
M H 0.859
V H 0.882
A H 0.865
R H 0.848
A H 0.848
K H 0.799
F H 0.673
R H 0.423
G C 0.589
A C 0.624
N C 0.680
K C 0.431
R E 0.452
A E 0.803
L E 0.890
W E 0.932
L E 0.945
L E 0.939
A E 0.883
G E 0.584
S T 0.426
A T 0.552
S T 0.511
R C 0.432
L C 0.743
P C 0.668
E T 0.717
A T 0.728
G T 0.753
E T 0.455
D E 0.594
L E 0.715
E E 0.795
L E 0.744
K E 0.615
M E 0.559
G T 0.489
E T 0.678
N T 0.715
W T 0.771
R C 0.360
R E 0.690
T E 0.920
G E 0.924
T E 0.962
V E 0.957
L E 0.929
A E 0.801
A E 0.580
V E 0.401
K T 0.379
L T 0.652
E T 0.622
D T 0.582
G T 0.437
Q H 0.366
V E 0.412
V E 0.538
V E 0.616
Q E 0.542
V E 0.553
V E 0.594
M E 0.491
N H 0.286
N T 0.367
D T 0.506
M T 0.531
E T 0.568
P T 0.520
D T 0.509
S E 0.447
I E 0.844
F E 0.924
R E 0.901
V E 0.826
R E 0.511
D T 0.451
D T 0.373
A T 0.420
N C 0.405
T E 0.724
L E 0.873
H E 0.884
I E 0.794
E C 0.412
P C 0.502
L C 0.598
P C 0.591
Y C 0.451
S C 0.395
L C 0.547
E C 0.742
E C 0.929
END