PFRMAT SS
TARGET T0146
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0146.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 50
METHOD
MODEL 1
A C 0.996
F C 0.662
T C 0.459
P C 0.420
F C 0.403
P C 0.495
P C 0.423
R C 0.350
Q C 0.337
P C 0.381
T C 0.393
A H 0.340
S H 0.310
A H 0.235
R C 0.265
L C 0.287
P C 0.378
L C 0.469
T E 0.521
L E 0.791
M E 0.856
T E 0.747
L C 0.361
D T 0.413
D T 0.536
W C 0.319
A E 0.607
L E 0.913
A E 0.971
T E 0.973
I E 0.920
T E 0.628
G S 0.388
A H 0.262
D H 0.336
S H 0.834
E H 0.950
K H 0.936
Y H 0.941
M H 0.938
Q H 0.835
G H 0.799
Q H 0.689
V H 0.484
T H 0.315
A H 0.249
D C 0.365
V H 0.432
S G 0.392
Q G 0.421
M C 0.294
A C 0.544
E T 0.378
D T 0.560
Q C 0.334
H E 0.462
L E 0.721
L E 0.836
A E 0.851
A E 0.905
H E 0.905
C E 0.814
D C 0.653
A T 0.821
K T 0.789
G S 0.578
K C 0.495
M E 0.814
W E 0.846
S E 0.876
N E 0.896
L E 0.939
R E 0.976
L E 0.985
F E 0.984
R E 0.931
D E 0.622
G T 0.679
D T 0.874
G E 0.323
F E 0.847
A E 0.972
W E 0.965
I E 0.920
E E 0.665
R C 0.753
R G 0.398
S G 0.384
V H 0.514
R H 0.814
E H 0.911
P H 0.944
Q H 0.976
L H 0.983
T H 0.987
E H 0.981
L H 0.978
K H 0.943
K H 0.864
Y H 0.776
A H 0.639
V H 0.329
F H 0.207
S T 0.390
K T 0.287
V E 0.607
T E 0.726
I E 0.698
A E 0.529
P C 0.450
D C 0.507
D C 0.478
E H 0.491
R H 0.560
V H 0.562
L H 0.494
L H 0.541
G H 0.563
V H 0.469
A H 0.337
G C 0.373
F C 0.354
Q H 0.367
A H 0.637
R H 0.767
A H 0.834
A H 0.848
L H 0.851
A H 0.828
N H 0.737
L H 0.653
F H 0.504
S H 0.406
E H 0.314
L C 0.366
P C 0.479
S C 0.246
K T 0.256
E H 0.271
K C 0.273
Q E 0.284
V E 0.351
V C 0.254
K T 0.276
E S 0.260
G C 0.271
A E 0.690
T E 0.878
T E 0.892
L E 0.881
L E 0.728
W C 0.463
F C 0.244
E T 0.337
H C 0.322
P C 0.358
A C 0.324
E T 0.396
R T 0.259
F E 0.583
L E 0.851
I E 0.893
V E 0.855
T E 0.621
D C 0.761
E G 0.291
A H 0.300
T H 0.432
A H 0.828
N H 0.889
M H 0.922
L H 0.949
T H 0.948
D H 0.910
K H 0.877
L H 0.798
R H 0.721
G H 0.602
E H 0.395
A T 0.354
E C 0.490
L C 0.440
N C 0.324
N C 0.477
S H 0.733
Q H 0.882
Q H 0.936
W H 0.968
L H 0.977
A H 0.975
L H 0.980
N H 0.974
I H 0.974
E H 0.955
A H 0.670
G T 0.615
F C 0.506
P C 0.496
V C 0.261
I C 0.258
D C 0.264
A H 0.239
A H 0.213
N C 0.321
S T 0.356
G T 0.414
Q C 0.325
F C 0.468
I C 0.537
P H 0.364
Q H 0.524
A H 0.547
T H 0.538
N H 0.495
L H 0.420
Q H 0.533
A H 0.487
L T 0.259
G T 0.393
G C 0.540
I E 0.425
S E 0.465
F E 0.390
K C 0.432
K T 0.433
G T 0.419
C C 0.456
Y C 0.412
T T 0.591
G T 0.360
Q H 0.803
E H 0.914
M H 0.968
V H 0.978
A H 0.978
R H 0.974
A H 0.965
K H 0.924
F H 0.742
R T 0.733
G T 0.714
A C 0.707
N C 0.537
K C 0.400
R E 0.612
A E 0.778
L E 0.903
W E 0.934
L E 0.952
L E 0.907
A E 0.802
G E 0.547
S C 0.380
A S 0.383
S C 0.349
R C 0.513
L C 0.639
P C 0.797
E C 0.700
A T 0.464
G T 0.361
E C 0.513
D E 0.642
L E 0.801
E E 0.851
L E 0.734
K E 0.704
M E 0.486
G C 0.266
E T 0.306
N T 0.561
W T 0.353
R C 0.430
R E 0.515
T E 0.797
G E 0.865
T E 0.953
V E 0.976
L E 0.972
A E 0.864
A E 0.603
V E 0.312
K S 0.386
L C 0.449
E T 0.369
D T 0.378
G H 0.453
Q H 0.556
V H 0.618
V H 0.633
V H 0.667
Q H 0.712
V H 0.680
V H 0.653
M H 0.561
N H 0.510
N H 0.453
D T 0.325
M C 0.323
E C 0.453
P T 0.460
D T 0.510
S C 0.453
I E 0.655
F E 0.838
R E 0.870
V E 0.709
R E 0.364
D S 0.337
D S 0.377
A C 0.407
N E 0.450
T E 0.802
L E 0.890
H E 0.895
I E 0.786
E E 0.552
P C 0.455
L C 0.708
P C 0.717
Y C 0.493
S C 0.490
L C 0.540
E C 0.865
E C 0.998
END