PFRMAT SS
TARGET T0144
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0144.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 396
METHOD
MODEL 1
M C 0.994
S C 0.793
N C 0.666
P C 0.573
K E 0.586
V E 0.940
F E 0.965
F E 0.964
D E 0.854
M E 0.823
A E 0.803
I E 0.690
A T 0.538
G T 0.397
N E 0.487
P E 0.705
A E 0.781
G E 0.781
R E 0.855
I E 0.950
V E 0.974
M E 0.973
E E 0.968
L E 0.867
Y E 0.531
A G 0.351
D T 0.500
T T 0.277
T S 0.432
P H 0.815
R H 0.912
T H 0.957
A H 0.987
E H 0.990
N H 0.980
F H 0.981
R H 0.970
A H 0.947
L H 0.915
C H 0.792
T H 0.434
G S 0.334
E C 0.415
K C 0.356
G C 0.317
V C 0.368
G C 0.539
R T 0.468
S T 0.771
G T 0.418
K C 0.534
P E 0.373
L E 0.346
H C 0.337
Y C 0.557
K T 0.518
G T 0.444
S C 0.544
T C 0.397
F E 0.429
H E 0.453
R E 0.514
V E 0.475
I C 0.389
P T 0.637
N T 0.822
F E 0.396
M E 0.749
C E 0.777
Q E 0.569
G C 0.285
G C 0.323
D C 0.490
F C 0.327
T C 0.317
A C 0.322
G T 0.305
N C 0.316
G C 0.389
T T 0.334
G C 0.316
A C 0.412
E C 0.345
S C 0.325
I T 0.252
Y T 0.404
G C 0.309
A C 0.379
K C 0.342
F C 0.453
A C 0.422
D C 0.336
E T 0.261
N T 0.295
F C 0.322
I C 0.378
K C 0.282
R C 0.329
H C 0.337
T S 0.385
G S 0.491
P T 0.347
G E 0.371
I E 0.762
L E 0.870
S E 0.827
M E 0.804
A E 0.569
N E 0.277
A C 0.441
G C 0.549
A T 0.576
G T 0.553
T C 0.446
N T 0.416
G T 0.339
S C 0.485
Q E 0.731
F E 0.907
F E 0.898
I E 0.887
C E 0.793
T E 0.450
E C 0.383
K C 0.435
T C 0.457
E T 0.315
W T 0.356
L T 0.294
D T 0.459
G T 0.515
K S 0.316
H E 0.728
V E 0.881
V E 0.918
F E 0.877
G E 0.749
K E 0.750
V E 0.679
I E 0.428
E H 0.336
G H 0.428
M H 0.898
N H 0.956
V H 0.972
V H 0.982
R H 0.981
D H 0.975
I H 0.953
E H 0.895
K H 0.786
V H 0.345
G C 0.496
S C 0.858
G C 0.458
S T 0.672
G S 0.562
K C 0.571
T C 0.445
S C 0.557
R E 0.390
P E 0.526
V E 0.862
T E 0.954
I E 0.914
A E 0.713
D E 0.439
C C 0.338
G E 0.492
Q E 0.560
L C 0.866
S C 0.997
END