PFRMAT SS
TARGET T0142
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0142.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 61
METHOD
MODEL 1
G C 0.999
S C 0.962
P C 0.817
P C 0.480
A S 0.335
Q E 0.349
L E 0.760
S E 0.960
V E 0.978
H E 0.973
T E 0.962
V E 0.936
S E 0.757
W E 0.539
N E 0.374
S C 0.370
G C 0.310
H C 0.318
E C 0.446
R C 0.557
A C 0.758
P C 0.517
T H 0.286
N H 0.420
L H 0.493
E H 0.579
E H 0.626
L H 0.643
L H 0.548
G H 0.324
L C 0.423
N C 0.511
S T 0.352
G T 0.313
E C 0.433
T C 0.596
P C 0.671
D E 0.458
V E 0.969
I E 0.994
A E 0.997
V E 0.984
A E 0.859
V E 0.661
Q E 0.628
G E 0.598
F E 0.445
G C 0.374
F C 0.280
Q H 0.266
T H 0.243
D H 0.301
K T 0.290
P H 0.256
Q C 0.341
Q C 0.374
G C 0.375
P H 0.675
A H 0.755
C H 0.915
V H 0.966
K H 0.964
N H 0.963
F H 0.957
Q H 0.925
S H 0.908
L H 0.815
L H 0.476
T C 0.384
S S 0.317
K T 0.329
G S 0.291
Y E 0.705
T E 0.880
K E 0.894
L E 0.882
K E 0.788
N E 0.622
T E 0.534
I E 0.565
T E 0.587
E E 0.600
T E 0.755
M E 0.829
G E 0.836
L E 0.802
T E 0.841
V E 0.803
Y E 0.798
C E 0.539
L C 0.469
E G 0.359
K G 0.335
H G 0.378
L H 0.306
D T 0.312
Q H 0.261
N C 0.285
T C 0.251
L C 0.293
K C 0.511
N C 0.446
E C 0.366
T E 0.377
I E 0.440
I E 0.466
V E 0.419
T E 0.397
V C 0.281
D C 0.282
D T 0.270
Q T 0.486
K T 0.366
K C 0.451
S S 0.329
G E 0.367
G E 0.503
I E 0.875
V E 0.974
T E 0.983
S E 0.990
F E 0.975
T E 0.964
I E 0.871
Y E 0.407
N T 0.668
K S 0.316
R E 0.831
F E 0.935
S E 0.967
F E 0.979
T E 0.960
T E 0.911
S E 0.699
R E 0.538
M E 0.339
S C 0.280
D T 0.402
E T 0.493
D H 0.270
V H 0.344
T H 0.376
S H 0.525
T H 0.545
N H 0.563
T H 0.661
K H 0.823
Y H 0.874
A H 0.922
Y H 0.984
D H 0.989
T H 0.989
R H 0.985
L H 0.963
D H 0.806
Y H 0.535
S C 0.363
K C 0.301
K C 0.334
D C 0.439
D S 0.305
P T 0.409
S C 0.388
D E 0.435
F E 0.821
L E 0.959
F E 0.978
W E 0.955
I E 0.762
G E 0.543
D C 0.412
L T 0.384
N T 0.274
V C 0.282
R C 0.308
V C 0.378
E C 0.502
T C 0.331
N C 0.421
A H 0.779
T H 0.902
H H 0.935
A H 0.953
K H 0.958
S H 0.945
L H 0.920
V H 0.851
D H 0.760
Q H 0.549
N T 0.445
N C 0.445
I H 0.769
D H 0.835
G H 0.813
L H 0.817
M H 0.782
A H 0.749
F H 0.733
D H 0.675
Q H 0.722
L H 0.782
K H 0.834
K H 0.715
A H 0.652
K H 0.566
E T 0.444
Q T 0.422
K C 0.534
L C 0.367
F C 0.396
D C 0.286
G T 0.294
W C 0.345
T C 0.409
E C 0.463
P C 0.566
Q C 0.627
V C 0.863
T C 0.818
F C 0.477
K C 0.786
P C 0.474
T C 0.417
Y C 0.400
K C 0.514
F C 0.450
K C 0.594
P T 0.665
N T 0.673
T C 0.467
D C 0.346
E T 0.357
Y T 0.391
D T 0.384
L S 0.473
S C 0.547
A E 0.419
T C 0.559
P C 0.517
S C 0.427
W C 0.284
T E 0.361
D E 0.424
R E 0.584
A E 0.621
L E 0.669
Y E 0.639
K E 0.418
S C 0.316
G C 0.337
T C 0.468
G C 0.428
K C 0.287
T C 0.305
I E 0.413
Q E 0.496
P E 0.510
L E 0.487
S E 0.424
Y E 0.324
N C 0.255
S C 0.324
L C 0.430
T T 0.260
N E 0.288
Y E 0.425
K E 0.601
Q E 0.465
T C 0.439
E C 0.388
H S 0.536
R C 0.398
P E 0.468
V E 0.784
L E 0.893
A E 0.943
K E 0.967
F E 0.974
R E 0.955
V E 0.823
T E 0.635
L C 0.995
END