PFRMAT SS
TARGET T0141
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0141.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 58
METHOD
MODEL 1
M C 0.997
L C 0.721
L C 0.579
D C 0.473
E C 0.281
G C 0.262
W C 0.415
L C 0.307
A C 0.229
E T 0.260
A C 0.265
R C 0.375
R C 0.427
V C 0.619
P C 0.624
S C 0.656
P C 0.356
H C 0.390
Y G 0.283
D C 0.335
C C 0.443
R C 0.643
P C 0.499
D T 0.465
D C 0.312
E C 0.443
N C 0.557
P C 0.801
S S 0.468
L E 0.990
L E 0.999
V E 0.999
V E 0.994
H E 0.876
N C 0.447
I C 0.428
S S 0.483
L S 0.403
P C 0.514
P H 0.490
G H 0.689
E H 0.684
F H 0.717
G H 0.684
G H 0.731
P H 0.811
W H 0.867
I H 0.923
D H 0.925
A H 0.914
L H 0.865
F H 0.717
T T 0.425
G T 0.461
T C 0.561
I C 0.667
D C 0.869
P T 0.622
N T 0.666
A G 0.245
H C 0.317
P H 0.261
Y H 0.283
F H 0.347
A H 0.307
G T 0.256
I C 0.496
A T 0.586
H T 0.619
L S 0.429
R C 0.429
V E 0.600
S E 0.784
A E 0.896
H E 0.924
C E 0.955
L E 0.971
I E 0.922
R E 0.559
R T 0.571
D T 0.841
G S 0.545
E E 0.534
I E 0.891
V E 0.960
Q E 0.961
Y E 0.957
V E 0.917
P E 0.710
F G 0.462
D G 0.456
K G 0.503
R E 0.356
A E 0.550
W E 0.718
H E 0.663
A E 0.485
G E 0.356
V C 0.281
S C 0.359
S C 0.255
Y T 0.321
Q T 0.373
G T 0.346
R C 0.363
E T 0.290
R T 0.290
C C 0.335
N C 0.444
D C 0.311
F E 0.384
S E 0.562
I E 0.646
G E 0.860
I E 0.927
E E 0.956
L E 0.900
E E 0.728
G C 0.413
T C 0.391
D T 0.428
T S 0.488
L S 0.446
A C 0.545
Y C 0.687
T C 0.860
D H 0.984
A H 0.989
Q H 0.994
Y H 0.996
Q H 0.992
Q H 0.986
L H 0.992
A H 0.994
A H 0.995
V H 0.996
T H 0.997
N H 0.996
A H 0.993
L H 0.992
I H 0.978
T H 0.901
R H 0.685
Y T 0.336
P C 0.583
A C 0.623
I C 0.886
A G 0.728
N G 0.709
N G 0.742
M C 0.339
T C 0.394
G C 0.288
H C 0.474
C C 0.293
N C 0.359
I C 0.437
A C 0.711
P T 0.306
E C 0.313
R C 0.296
K C 0.434
T C 0.333
D C 0.538
P T 0.364
G T 0.324
P T 0.494
S T 0.400
F C 0.436
D C 0.713
W H 0.893
A H 0.938
R H 0.967
F H 0.980
R H 0.959
A H 0.904
L H 0.808
V H 0.484
T T 0.402
P S 0.407
S C 0.469
S C 0.429
H C 0.406
K C 0.243
E T 0.271
M C 0.640
T C 0.984
END