Best Alignments for T0139

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment	AL alignment	E-value	FSSP rep	SCOP Domain(s)
T0139-1iuaA-2track-local-adpstyle5.pw.a2m.gz	T0139-1iuaA-2track-local-adpstyle5.pw.al	2.2371e-01
1gdoA-T0139-fssp-global-adpstyle5.pw.a2m.gz	1gdoA-T0139-fssp-global-adpstyle5.pw.al	3.4196e-01	1gdoA	d.153.1.1
T0139-1jx6A-2track-local-adpstyle5.pw.a2m.gz	T0139-1jx6A-2track-local-adpstyle5.pw.al	4.2167e-01		c.93.1.1
1ckuA-T0139-fssp-global-adpstyle5.pw.a2m.gz	1ckuA-T0139-fssp-global-adpstyle5.pw.al	1.1742e+00	1ckuA	g.35.1.1
T0139-1h2rS-2track-local-adpstyle5.pw.a2m.gz	T0139-1h2rS-2track-local-adpstyle5.pw.al	1.2003e+00	2frvA	e.19.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001