Best Alignments for T0138

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0138-1d5wC-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0138-1d5wC-2track-protein-STR-local-adpstyle5.pw.al 1.4650e-01 1dbwA c.23.1.1
T0138-1jjfA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0138-1jjfA-2track-protein-STR-local-adpstyle5.pw.al 5.4165e+00 c.69.1.2
T0138-1bouB-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0138-1bouB-2track-protein-STR-local-adpstyle5.pw.al 3.7760e+00 1bouB c.56.6.1
T0138-1kgsA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0138-1kgsA-2track-protein-STR-local-adpstyle5.pw.al 8.5218e+00 a.4.6.1
T0138-1pcfA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0138-1pcfA-2track-protein-STR-local-adpstyle5.pw.al 8.7876e+00 1pcfA d.18.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001