# TARGET T0137 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0137.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 111 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.027 0.005 0.010 0.005 0.243 0.711 2 E 0.062 0.012 0.037 0.004 0.334 0.551 3 A 0.159 0.016 0.052 0.002 0.324 0.447 4 F 0.424 0.013 0.015 0.001 0.187 0.360 5 L 0.544 0.003 0.002 0.001 0.072 0.378 6 G 0.917 0.003 0.001 0.001 0.013 0.067 7 T 0.977 0.003 0.001 0.001 0.005 0.016 8 W 0.979 0.001 0.001 0.001 0.002 0.018 9 K 0.973 0.001 0.001 0.001 0.005 0.021 10 M 0.927 0.003 0.001 0.001 0.012 0.058 11 E 0.796 0.004 0.004 0.001 0.069 0.126 12 K 0.599 0.010 0.009 0.001 0.164 0.217 13 S 0.281 0.026 0.019 0.003 0.320 0.351 14 E 0.105 0.031 0.024 0.018 0.399 0.424 15 G 0.100 0.023 0.012 0.044 0.219 0.601 16 F 0.004 0.001 0.019 0.894 0.056 0.027 17 D 0.001 0.001 0.008 0.950 0.036 0.006 18 K 0.001 0.001 0.002 0.970 0.023 0.003 19 I 0.001 0.001 0.002 0.978 0.016 0.002 20 M 0.001 0.001 0.002 0.983 0.012 0.002 21 E 0.001 0.001 0.008 0.973 0.015 0.003 22 R 0.001 0.001 0.009 0.967 0.014 0.008 23 L 0.001 0.001 0.006 0.905 0.022 0.065 24 G 0.001 0.001 0.001 0.006 0.025 0.968 25 V 0.001 0.002 0.001 0.002 0.031 0.965 26 D 0.001 0.001 0.001 0.006 0.025 0.967 27 F 0.001 0.001 0.005 0.967 0.011 0.016 28 V 0.002 0.001 0.006 0.983 0.006 0.003 29 T 0.002 0.001 0.010 0.981 0.006 0.001 30 R 0.003 0.001 0.005 0.986 0.003 0.003 31 K 0.003 0.001 0.008 0.979 0.007 0.002 32 M 0.002 0.001 0.007 0.975 0.009 0.005 33 G 0.004 0.001 0.016 0.948 0.020 0.012 34 N 0.007 0.002 0.035 0.914 0.025 0.017 35 L 0.021 0.002 0.046 0.727 0.105 0.098 36 V 0.037 0.013 0.037 0.320 0.207 0.385 37 K 0.076 0.012 0.023 0.033 0.370 0.486 38 P 0.094 0.003 0.033 0.018 0.416 0.435 39 N 0.481 0.005 0.026 0.013 0.238 0.238 40 L 0.933 0.011 0.002 0.002 0.020 0.033 41 I 0.966 0.001 0.001 0.001 0.006 0.026 42 V 0.973 0.001 0.001 0.001 0.006 0.019 43 T 0.957 0.010 0.001 0.001 0.009 0.024 44 D 0.584 0.005 0.007 0.002 0.339 0.062 45 L 0.086 0.002 0.028 0.004 0.825 0.055 46 G 0.055 0.010 0.014 0.001 0.866 0.053 47 G 0.035 0.006 0.015 0.002 0.903 0.038 48 G 0.174 0.005 0.011 0.005 0.360 0.444 49 K 0.881 0.012 0.003 0.001 0.056 0.047 50 Y 0.952 0.002 0.001 0.001 0.018 0.027 51 K 0.974 0.001 0.001 0.001 0.007 0.018 52 M 0.985 0.002 0.001 0.001 0.004 0.009 53 R 0.973 0.001 0.001 0.001 0.009 0.017 54 S 0.940 0.002 0.001 0.001 0.024 0.034 55 E 0.762 0.005 0.002 0.001 0.096 0.134 56 S 0.558 0.007 0.005 0.001 0.233 0.195 57 T 0.435 0.008 0.010 0.002 0.327 0.219 58 F 0.466 0.015 0.015 0.002 0.333 0.168 59 K 0.466 0.013 0.010 0.002 0.340 0.168 60 T 0.521 0.003 0.005 0.001 0.254 0.215 61 T 0.853 0.003 0.001 0.001 0.060 0.082 62 E 0.914 0.005 0.001 0.001 0.022 0.059 63 C 0.933 0.004 0.001 0.001 0.018 0.043 64 S 0.944 0.002 0.001 0.001 0.019 0.034 65 F 0.917 0.005 0.001 0.002 0.025 0.050 66 K 0.837 0.008 0.001 0.004 0.075 0.075 67 L 0.559 0.010 0.003 0.014 0.249 0.165 68 G 0.244 0.006 0.007 0.019 0.417 0.307 69 E 0.555 0.039 0.010 0.012 0.210 0.174 70 K 0.661 0.009 0.014 0.016 0.103 0.196 71 F 0.686 0.027 0.026 0.020 0.071 0.169 72 K 0.778 0.019 0.018 0.010 0.067 0.107 73 E 0.757 0.006 0.035 0.009 0.098 0.095 74 V 0.847 0.040 0.006 0.004 0.053 0.051 75 T 0.495 0.037 0.006 0.005 0.441 0.016 76 P 0.152 0.003 0.005 0.003 0.824 0.012 77 D 0.020 0.001 0.002 0.001 0.971 0.005 78 S 0.028 0.001 0.004 0.001 0.956 0.010 79 R 0.582 0.013 0.002 0.001 0.204 0.198 80 E 0.888 0.038 0.001 0.001 0.030 0.043 81 V 0.907 0.003 0.001 0.001 0.020 0.069 82 A 0.943 0.002 0.001 0.001 0.018 0.036 83 S 0.959 0.003 0.001 0.001 0.011 0.026 84 L 0.980 0.001 0.001 0.001 0.007 0.012 85 I 0.985 0.001 0.001 0.001 0.006 0.007 86 T 0.979 0.003 0.001 0.001 0.010 0.008 87 V 0.812 0.013 0.003 0.001 0.164 0.009 88 E 0.221 0.003 0.009 0.002 0.746 0.020 89 N 0.027 0.001 0.008 0.001 0.957 0.006 90 G 0.068 0.004 0.013 0.003 0.892 0.021 91 V 0.779 0.009 0.001 0.001 0.095 0.115 92 M 0.982 0.003 0.001 0.001 0.005 0.010 93 K 0.987 0.001 0.001 0.001 0.002 0.011 94 H 0.996 0.001 0.001 0.001 0.001 0.002 95 E 0.988 0.001 0.001 0.001 0.004 0.007 96 Q 0.976 0.001 0.001 0.001 0.008 0.015 97 D 0.787 0.007 0.002 0.001 0.100 0.103 98 D 0.160 0.009 0.017 0.003 0.670 0.142 99 K 0.037 0.005 0.037 0.004 0.774 0.143 100 T 0.052 0.009 0.041 0.003 0.783 0.112 101 K 0.210 0.019 0.029 0.005 0.451 0.286 102 V 0.596 0.014 0.006 0.002 0.106 0.275 103 T 0.905 0.007 0.001 0.001 0.028 0.058 104 Y 0.929 0.002 0.001 0.001 0.018 0.050 105 I 0.960 0.002 0.001 0.001 0.009 0.028 106 E 0.969 0.001 0.001 0.001 0.007 0.021 107 R 0.974 0.001 0.001 0.001 0.009 0.014 108 V 0.958 0.001 0.001 0.001 0.022 0.017 109 V 0.930 0.004 0.002 0.001 0.047 0.016 110 E 0.722 0.013 0.003 0.002 0.224 0.036 111 G 0.093 0.001 0.007 0.002 0.860 0.037 112 N 0.186 0.002 0.012 0.004 0.737 0.060 113 E 0.908 0.009 0.001 0.001 0.057 0.024 114 L 0.982 0.001 0.001 0.001 0.005 0.012 115 K 0.989 0.001 0.001 0.001 0.002 0.009 116 A 0.993 0.001 0.001 0.001 0.001 0.004 117 T 0.988 0.001 0.001 0.001 0.004 0.007 118 V 0.970 0.001 0.001 0.001 0.012 0.017 119 K 0.909 0.005 0.001 0.001 0.068 0.016 120 V 0.649 0.012 0.003 0.002 0.302 0.033 121 D 0.128 0.002 0.003 0.002 0.813 0.052 122 E 0.244 0.004 0.003 0.001 0.671 0.076 123 V 0.905 0.005 0.001 0.001 0.046 0.044 124 V 0.970 0.004 0.001 0.001 0.007 0.019 125 C 0.982 0.001 0.001 0.001 0.003 0.013 126 V 0.989 0.001 0.001 0.001 0.002 0.006 127 R 0.968 0.001 0.001 0.002 0.006 0.022 128 T 0.920 0.001 0.001 0.004 0.019 0.054 129 Y 0.778 0.001 0.004 0.007 0.046 0.164 130 S 0.734 0.006 0.008 0.016 0.081 0.154 131 K 0.634 0.045 0.012 0.019 0.104 0.185 132 V 0.218 0.012 0.007 0.025 0.124 0.614 133 A 0.002 0.001 0.001 0.001 0.037 0.958