PFRMAT SS TARGET T0137 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0137.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 111 METHOD MODEL 1 M C 0.999 E C 0.831 A T 0.353 F C 0.333 L C 0.479 G E 0.599 T E 0.776 W E 0.887 K E 0.943 M E 0.921 E E 0.825 K E 0.707 S E 0.453 E E 0.361 G C 0.389 F H 0.847 D H 0.972 K H 0.987 I H 0.991 M H 0.992 E H 0.974 R H 0.872 L T 0.826 G T 0.969 V C 0.843 D C 0.914 F H 0.944 V H 0.981 T H 0.991 R H 0.994 K H 0.993 M H 0.984 G H 0.960 N H 0.781 L H 0.503 V S 0.336 K C 0.671 P C 0.673 N E 0.641 L E 0.977 I E 0.992 V E 0.981 T E 0.911 D E 0.629 L C 0.265 G T 0.507 G T 0.580 G T 0.321 K E 0.748 Y E 0.935 K E 0.980 M E 0.970 R E 0.945 S E 0.820 E E 0.585 S C 0.342 T S 0.366 F S 0.344 K E 0.468 T E 0.631 T E 0.884 E E 0.945 C E 0.957 S E 0.926 F E 0.903 K E 0.800 L E 0.548 G S 0.336 E S 0.416 K E 0.458 F E 0.575 K E 0.636 E E 0.644 V E 0.718 T E 0.434 P T 0.395 D T 0.753 S S 0.502 R C 0.521 E E 0.736 V E 0.913 A E 0.944 S E 0.948 L E 0.972 I E 0.985 T E 0.948 V E 0.791 E T 0.555 N T 0.852 G T 0.884 V E 0.821 M E 0.983 K E 0.987 H E 0.983 E E 0.975 Q E 0.960 D E 0.787 D E 0.490 K T 0.436 T S 0.471 K S 0.350 V E 0.705 T E 0.903 Y E 0.956 I E 0.964 E E 0.981 R E 0.980 V E 0.984 V E 0.947 E E 0.617 G T 0.824 N T 0.735 E E 0.787 L E 0.973 K E 0.989 A E 0.996 T E 0.995 V E 0.991 K E 0.969 V E 0.898 D T 0.822 E T 0.862 V E 0.884 V E 0.972 C E 0.971 V E 0.961 R E 0.874 T E 0.869 Y E 0.880 S E 0.858 K E 0.622 V C 0.691 A C 0.999 END