/projects/compbio/experiments/casp5/scripts-human/create_summary_html \ T0136 file:/projects/compbio/experiments/casp5/t0136/t0136-80-290 > /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_master_table_head_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ Inputs >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html echo Received sequence T0136.a2m Received sequence T0136.a2m /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Submitted sequence(s)" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m T0136.a2m >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Provided documentation" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.doc.html T0136.doc.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k -out T0136.t2k \ -seed T0136.a2m @@@@ chgrp protein /projects/compbio/tmp/target2k-cc69-21398 @@@@ cp /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m m0.a2m @@@@ checkseq foo -alphabet protein -db m0.a2m > init.check SAM: checkseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:11 Done with sequence reading # About to count sequences in /projects/compbio/data/nrp/nr /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: E-value thresholds used are prefilter: 0.01, actual: 0.0001 prefilter: 1, actual: 0.0002 prefilter: 10, actual: 0.001 prefilter: 400, actual: 0.005 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: aweight_bits are 0.8, 0.7, 0.6, 0.5 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: db_size= 1047893 reverse_diff= 4 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: blast_max_report= 20000 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: db=/projects/compbio/data/nrp/nr /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: aweight_method=1 aweight_exponent=10 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: force_seed=1 constraints=1 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: jump_in=0.2 jump_out=1 fimstrength=1 fimtrans=-1 @@@@ wu-blast-prefilter -tmp_dir /projects/compbio/tmp/target2k-cc69-21398 -out prefilter -seed m0.a2m -prefilter_thresholds 0.01,1,10,400 -db /projects/compbio/data/nrp/nr -blast_max_report 20000 main::echo_parameters() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 90. main::build_query_files() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 96. main::blast_query_to_database() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 99. main::accumulate_blast_hits() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 100. @@@@ chgrp protein /projects/compbio/tmp/target2k-cc69-21398/blast-prefilter-cc69-21414 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter: E-value thresholds used are For /projects/postgres/tmp/target2k-cc69-21398/prefilter_1.fa, 0.01 For /projects/postgres/tmp/target2k-cc69-21398/prefilter_2.fa, 1 For /projects/postgres/tmp/target2k-cc69-21398/prefilter_3.fa, 10 For /projects/postgres/tmp/target2k-cc69-21398/prefilter_4.fa, 400 /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter: db=/projects/compbio/data/nrp/nr @@@@ uniqueseq init -alignfile /projects/postgres/tmp/target2k-cc69-21398/m0.a2m -a protein -a2mdots 0 SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25 Reading alignment file /projects/postgres/tmp/target2k-cc69-21398/m0.a2m (1 sequence, 211 columns) as A2M alignment. Writing sequence output to init.a2m. No sequences have been dropped. @@@@ /projects/compbio/bin/wu-blastp /projects/compbio/data/nrp/nr 1.fasta E=400 V=20000 B=0 -gi > 1.fasta-blast.out Searched 1047,893 sequences # parsing wu-blastp output @@@@ rm -f 1.fasta < /dev/null @@@@ rm -f 1.fasta-blast.out < /dev/null # Extracting hits in FASTA format from /projects/compbio/data/nrp/nr @@@@ rm -rf /projects/compbio/tmp/target2k-cc69-21398/blast-prefilter-cc69-21414 < /dev/null @@@@ modelfromalign unused -alignfile m0.a2m \ -constraints_from_align 1 -constraints_out m0.cst SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m0.a2m (1 sequence, 211 columns) as A2M alignment. # About to count sequences in m0.a2m # About to count sequences in prefilter_1.fa @@@@ modelfromalign tmp_1-a -alignfile m0.a2m \ -insert /projects/compbio/lib/gap1.5.regularizer \ -aweight_bits 0.8\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 -constraints m0.cst -constraints_out tmp_1-a.cst Reading parameter file /projects/compbio/lib/gap1.5.regularizer /projects/compbio/lib/gap1.5.regularizer(1): Reading REGULARIZER: gap1.5. Weak regularizer, gaps average 1.5, matches average 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m0.a2m (1 sequence, 211 columns) as A2M alignment. DEBUG: include_all=0 @@@@ hmmscore tmp_1-a -i tmp_1-a.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -adpstyle 1 \ -align_short 0 \ -simple_threshold -27.0726324112948 -Emax 0.0001 \ -mdEmax 0.0001\ -select_score 4 \ -select_seq 4 -select_mdalign 4 -select_md 4 -Motifcutoff 0.0947867298578199 -db prefilter_1.fa -constraints tmp_1-a.cst -constraints_out tmp_1-a-md.cst Reading parameter file tmp_1-a.mod tmp_1-a.mod(22): Reading MODEL -- Model from alignment file m0.a2m SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_1-a.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.839165 Database has 219 sequences with 106461 residues. @@@@ sortseq tmp_1-a-sort -alignfile tmp_1-a.mult \ -NLLfile tmp_1-a.mstat -a2mdots 0 SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00 Reading alignment file tmp_1-a.mult (206 sequences, 211 columns) as A2M alignment. Reading scores from file tmp_1-a.mstat Writing sequence output to tmp_1-a-sort.a2m. @@@@ cat m0.a2m tmp_1-a-sort.a2m > tmp_1-a.train.seq @@@@ cat m0.cst tmp_1-a-md.cst > tmp_1-a.train.cst # About to count sequences in tmp_1-a.train.seq # num_seqs=207 nll_thresh=-23.0726324112948 frac_id=0.802391523461361 @@@@ uniqueseq thinned_tmp -alignfile tmp_1-a.train.seq -a protein \ -percent_id 0.802391523461361 -a2mdots 0 SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25 Reading alignment file tmp_1-a.train.seq (207 sequences, 211 columns) as A2M alignment. Writing sequence output to thinned_tmp.a2m. Dropping 20 (of 207) duplicate sequences with differing IDs Dropping 84 (of 207) sequences with > 80.2% id 103 sequences left after dropping 104 of 207 sequences. @@@@ modelfromalign junk_for_weights \ -alignfile tmp_1-a.train.seq \ -aweight_bits 0.8\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file tmp_1-a.train.seq (103 sequences, 211 columns) as A2M alignment. @@@@ buildmodel tmp_1-b -insert tmp_1-a.mod\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -modellength 0 \ -internal_weight 0 \ -anneal_length 2 \ -many_files 1 \ -Nseq 20000\ -nsurgery 0 \ -fracinsert 0.2 \ -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \ -internal_weight 0 \ -train tmp_1-a.train.seq \ -nmodels 1\ -insert /projects/compbio/lib/gap1.5.regularizer -sequence_weights tmp_1-a.w -constraints tmp_1-a.train.cst Reading parameter file tmp_1-a.mod tmp_1-a.mod(22): Reading MODEL -- Model from alignment file m0.a2m Command line option(48): internal_weight has already been set. Using 0. Reading parameter file /projects/compbio/lib/gap1.5.regularizer /projects/compbio/lib/gap1.5.regularizer(1): Reading REGULARIZER: gap1.5. Weak regularizer, gaps average 1.5, matches average 10 SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50 -596.18 -23.38 -168.25 73.14 16 0 212 @@@@ hmmscore tmp_1-b -i tmp_1-b.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -db m0.a2m -db tmp_1-a.sel \ -select_score 4 \ -select_seq 4 \ -simple_threshold -27.0726324112948 -Emax 0.0001 \ -select_mdalign 4 -select_md 4 \ -adpstyle 1 \ -Motifcutoff 0.0947867298578199 \ -align_short 5 -mdEmax 0.0001 -constraints tmp_1-a.train.cst -constraints_out m_1.cst Reading parameter file tmp_1-b.mod tmp_1-b.mod(18): Reading MODEL -- Final model for run tmp_1-b (internally generated FIMs removed) SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_1-b.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -182.836380 Database has 213 sequences with 98242 residues. @@@@ cp -f tmp_1-b.mult m_1.a2m # About to count sequences in prefilter_2.fa @@@@ modelfromalign tmp_2-a -alignfile m_1.a2m \ -insert /projects/compbio/lib/stiff-gap5.regularizer \ -aweight_bits 0.7\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 -constraints m_1.cst -constraints_out tmp_2-a.cst Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer /projects/compbio/lib/stiff-gap5.regularizer(1): Reading REGULARIZER: gap5. stiff regularizer, gaps averge 5, matches average 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m_1.a2m (265 sequences, 211 columns) as A2M alignment. DEBUG: include_all=0 @@@@ hmmscore tmp_2-a -i tmp_2-a.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -adpstyle 1 \ -align_short 0 \ -simple_threshold -26.3794852306394 -Emax 0.0002 \ -mdEmax 0.0002\ -select_score 4 \ -select_seq 4 -select_mdalign 4 -select_md 4 -Motifcutoff 0.0947867298578199 -db prefilter_2.fa -constraints tmp_2-a.cst -constraints_out tmp_2-a-md.cst Reading parameter file tmp_2-a.mod tmp_2-a.mod(22): Reading MODEL -- Model from alignment file m_1.a2m SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_2-a.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -158.627350 Database has 238 sequences with 123229 residues. @@@@ sortseq tmp_2-a-sort -alignfile tmp_2-a.mult \ -NLLfile tmp_2-a.mstat -a2mdots 0 SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00 Reading alignment file tmp_2-a.mult (347 sequences, 211 columns) as A2M alignment. Reading scores from file tmp_2-a.mstat Writing sequence output to tmp_2-a-sort.a2m. @@@@ cat m0.a2m tmp_2-a-sort.a2m > tmp_2-a.train.seq @@@@ cat m0.cst tmp_2-a-md.cst > tmp_2-a.train.cst # About to count sequences in tmp_2-a.train.seq # num_seqs=348 nll_thresh=-22.3794852306394 frac_id=0.724361057127247 @@@@ uniqueseq thinned_tmp -alignfile tmp_2-a.train.seq -a protein \ -percent_id 0.724361057127247 -a2mdots 0 SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25 Reading alignment file tmp_2-a.train.seq (348 sequences, 211 columns) as A2M alignment. Writing sequence output to thinned_tmp.a2m. Dropping 37 (of 348) duplicate sequences with differing IDs Dropping 183 (of 348) sequences with > 72.4% id 128 sequences left after dropping 220 of 348 sequences. @@@@ modelfromalign junk_for_weights \ -alignfile tmp_2-a.train.seq \ -aweight_bits 0.7\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file tmp_2-a.train.seq (128 sequences, 211 columns) as A2M alignment. @@@@ buildmodel tmp_2-b -insert tmp_2-a.mod\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -modellength 0 \ -internal_weight 0 \ -anneal_length 2 \ -many_files 1 \ -Nseq 20000\ -nsurgery 0 \ -fracinsert 0.2 \ -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \ -internal_weight 0 \ -train tmp_2-a.train.seq \ -nmodels 1\ -insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_2-a.w -constraints tmp_2-a.train.cst Reading parameter file tmp_2-a.mod tmp_2-a.mod(22): Reading MODEL -- Model from alignment file m_1.a2m Command line option(48): internal_weight has already been set. Using 0. Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer /projects/compbio/lib/stiff-gap5.regularizer(1): Reading REGULARIZER: gap5. stiff regularizer, gaps averge 5, matches average 10 SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50 -596.17 -37.28 -136.13 59.53 4 0 212 @@@@ hmmscore tmp_2-b -i tmp_2-b.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -db m0.a2m -db tmp_2-a.sel \ -select_score 4 \ -select_seq 4 \ -simple_threshold -26.3794852306394 -Emax 0.0002 \ -select_mdalign 4 -select_md 4 \ -adpstyle 1 \ -Motifcutoff 0.0947867298578199 \ -align_short 5 -mdEmax 0.0002 -constraints tmp_2-a.train.cst -constraints_out m_2.cst Reading parameter file tmp_2-b.mod tmp_2-b.mod(18): Reading MODEL -- Final model for run tmp_2-b (internally generated FIMs removed) SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_2-b.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -154.963913 Database has 239 sequences with 123440 residues. @@@@ cp -f tmp_2-b.mult m_2.a2m # About to count sequences in prefilter_3.fa @@@@ modelfromalign tmp_3-a -alignfile m_2.a2m \ -insert /projects/compbio/lib/stiff-gap5.regularizer \ -aweight_bits 0.6\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 -constraints m_2.cst -constraints_out tmp_3-a.cst Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer /projects/compbio/lib/stiff-gap5.regularizer(1): Reading REGULARIZER: gap5. stiff regularizer, gaps averge 5, matches average 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m_2.a2m (349 sequences, 211 columns) as A2M alignment. DEBUG: include_all=0 @@@@ hmmscore tmp_3-a -i tmp_3-a.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -adpstyle 1 \ -align_short 0 \ -simple_threshold -24.7700473174418 -Emax 0.001 \ -mdEmax 0.001\ -select_score 4 \ -select_seq 4 -select_mdalign 4 -select_md 4 -Motifcutoff 0.0947867298578199 -db prefilter_3.fa -constraints tmp_3-a.cst -constraints_out tmp_3-a-md.cst Reading parameter file tmp_3-a.mod tmp_3-a.mod(22): Reading MODEL -- Model from alignment file m_2.a2m SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_3-a.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.613342 Database has 276 sequences with 164624 residues. @@@@ sortseq tmp_3-a-sort -alignfile tmp_3-a.mult \ -NLLfile tmp_3-a.mstat -a2mdots 0 SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00 Reading alignment file tmp_3-a.mult (393 sequences, 211 columns) as A2M alignment. Reading scores from file tmp_3-a.mstat Writing sequence output to tmp_3-a-sort.a2m. @@@@ cat m0.a2m tmp_3-a-sort.a2m > tmp_3-a.train.seq @@@@ cat m0.cst tmp_3-a-md.cst > tmp_3-a.train.cst # About to count sequences in tmp_3-a.train.seq # num_seqs=394 nll_thresh=-20.7700473174418 frac_id=0.703056118435794 @@@@ uniqueseq thinned_tmp -alignfile tmp_3-a.train.seq -a protein \ -percent_id 0.703056118435794 -a2mdots 0 SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25 Reading alignment file tmp_3-a.train.seq (394 sequences, 211 columns) as A2M alignment. Writing sequence output to thinned_tmp.a2m. Dropping 53 (of 394) duplicate sequences with differing IDs Dropping 198 (of 394) sequences with > 70.3% id 143 sequences left after dropping 251 of 394 sequences. @@@@ modelfromalign junk_for_weights \ -alignfile tmp_3-a.train.seq \ -aweight_bits 0.6\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file tmp_3-a.train.seq (143 sequences, 211 columns) as A2M alignment. @@@@ buildmodel tmp_3-b -insert tmp_3-a.mod\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -modellength 0 \ -internal_weight 0 \ -anneal_length 2 \ -many_files 1 \ -Nseq 20000\ -nsurgery 0 \ -fracinsert 0.2 \ -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \ -internal_weight 0 \ -train tmp_3-a.train.seq \ -nmodels 1\ -insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_3-a.w -constraints tmp_3-a.train.cst Reading parameter file tmp_3-a.mod tmp_3-a.mod(22): Reading MODEL -- Model from alignment file m_2.a2m Command line option(48): internal_weight has already been set. Using 0. Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer /projects/compbio/lib/stiff-gap5.regularizer(1): Reading REGULARIZER: gap5. stiff regularizer, gaps averge 5, matches average 10 SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50 -596.69 -19.99 -125.27 55.04 8 0 212 @@@@ hmmscore tmp_3-b -i tmp_3-b.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -db m0.a2m -db tmp_3-a.sel \ -select_score 4 \ -select_seq 4 \ -simple_threshold -24.7700473174418 -Emax 0.001 \ -select_mdalign 4 -select_md 4 \ -adpstyle 1 \ -Motifcutoff 0.0947867298578199 \ -align_short 5 -mdEmax 0.001 -constraints tmp_3-a.train.cst -constraints_out m_3.cst Reading parameter file tmp_3-b.mod tmp_3-b.mod(18): Reading MODEL -- Final model for run tmp_3-b (internally generated FIMs removed) SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_3-b.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -139.031326 Database has 268 sequences with 161560 residues. @@@@ cp -f tmp_3-b.mult m_3.a2m # About to count sequences in prefilter_4.fa @@@@ modelfromalign tmp_4-a -alignfile m_3.a2m \ -insert /projects/compbio/lib/fssp-trained.regularizer \ -aweight_bits 0.5\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 -constraints m_3.cst -constraints_out tmp_4-a.cst Reading parameter file /projects/compbio/lib/fssp-trained.regularizer /projects/compbio/lib/fssp-trained.regularizer(1): Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m_3.a2m (407 sequences, 211 columns) as A2M alignment. DEBUG: include_all=0 @@@@ hmmscore tmp_4-a -i tmp_4-a.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -adpstyle 1 \ -align_short 0 \ -simple_threshold -23.1606094011906 -Emax 0.005 \ -mdEmax 0.005\ -select_score 4 \ -select_seq 4 -select_mdalign 4 -select_md 4 -Motifcutoff 0.0947867298578199 -db prefilter_4.fa -constraints tmp_4-a.cst -constraints_out tmp_4-a-md.cst Reading parameter file tmp_4-a.mod tmp_4-a.mod(22): Reading MODEL -- Model from alignment file m_3.a2m SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_4-a.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -67.525146 Database has 659 sequences with 334102 residues. @@@@ sortseq tmp_4-a-sort -alignfile tmp_4-a.mult \ -NLLfile tmp_4-a.mstat -a2mdots 0 SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00 Reading alignment file tmp_4-a.mult (496 sequences, 211 columns) as A2M alignment. Reading scores from file tmp_4-a.mstat Writing sequence output to tmp_4-a-sort.a2m. @@@@ cat m0.a2m tmp_4-a-sort.a2m > tmp_4-a.train.seq @@@@ cat m0.cst tmp_4-a-md.cst > tmp_4-a.train.cst # About to count sequences in tmp_4-a.train.seq # num_seqs=497 nll_thresh=-19.1606094011906 frac_id=0.676164042821321 @@@@ uniqueseq thinned_tmp -alignfile tmp_4-a.train.seq -a protein \ -percent_id 0.676164042821321 -a2mdots 0 SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25 Reading alignment file tmp_4-a.train.seq (497 sequences, 211 columns) as A2M alignment. Writing sequence output to thinned_tmp.a2m. Dropping 68 (of 497) duplicate sequences with differing IDs Dropping 315 (of 497) sequences with > 67.6% id 114 sequences left after dropping 383 of 497 sequences. @@@@ modelfromalign junk_for_weights \ -alignfile tmp_4-a.train.seq \ -aweight_bits 0.5\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file tmp_4-a.train.seq (114 sequences, 211 columns) as A2M alignment. @@@@ buildmodel tmp_4-b -insert tmp_4-a.mod\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -modellength 0 \ -internal_weight 0 \ -anneal_length 2 \ -many_files 1 \ -Nseq 20000\ -nsurgery 0 \ -fracinsert 0.2 \ -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \ -internal_weight 0 \ -train tmp_4-a.train.seq \ -nmodels 1\ -insert /projects/compbio/lib/fssp-trained.regularizer -sequence_weights tmp_4-a.w -constraints tmp_4-a.train.cst Reading parameter file tmp_4-a.mod tmp_4-a.mod(22): Reading MODEL -- Model from alignment file m_3.a2m Command line option(48): internal_weight has already been set. Using 0. Reading parameter file /projects/compbio/lib/fssp-trained.regularizer /projects/compbio/lib/fssp-trained.regularizer(1): Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50 -597.59 -33.13 -121.87 54.87 4 0 212 @@@@ hmmscore tmp_4-b -i tmp_4-b.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -db m0.a2m -db tmp_4-a.sel \ -select_score 4 \ -select_seq 4 \ -simple_threshold -23.1606094011906 -Emax 0.005 \ -select_mdalign 4 -select_md 4 \ -adpstyle 1 \ -Motifcutoff 0.0947867298578199 \ -align_short 5 -mdEmax 0.005 -constraints tmp_4-a.train.cst -constraints_out m_4.cst Reading parameter file tmp_4-b.mod tmp_4-b.mod(18): Reading MODEL -- Final model for run tmp_4-b (internally generated FIMs removed) SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_4-b.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.868347 Database has 327 sequences with 231539 residues. @@@@ cp -f tmp_4-b.mult m_4.a2m @@@@ modelfromalign tmp_5-a -alignfile m_4.a2m \ -insert /projects/compbio/lib/fssp-trained.regularizer \ -aweight_bits 0.5\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 -constraints m_4.cst -constraints_out tmp_5-a.cst Reading parameter file /projects/compbio/lib/fssp-trained.regularizer /projects/compbio/lib/fssp-trained.regularizer(1): Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16 Reading alignment file m_4.a2m (497 sequences, 211 columns) as A2M alignment. DEBUG: include_all=0 @@@@ hmmscore tmp_5-a -i tmp_5-a.mod -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\ -dpstyle 0 \ -subtract_null 4 -sort 2 \ -db_size 1047893 \ -adpstyle 5 \ -align_short 0 \ -simple_threshold -23.1606094011906 -Emax 0.005 \ -mdEmax 0.005\ -select_score 4 \ -select_seq 4 -select_mdalign 4 -select_md 4 -Motifcutoff 0.0947867298578199 -db prefilter_4.fa -constraints tmp_5-a.cst -constraints_out tmp_5-a-md.cst Reading parameter file tmp_5-a.mod tmp_5-a.mod(22): Reading MODEL -- Model from alignment file m_4.a2m SAM: hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model tmp_5-a.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -68.600197 Database has 659 sequences with 334102 residues. @@@@ sortseq tmp_5-a-sort -alignfile tmp_5-a.mult \ -NLLfile tmp_5-a.mstat -a2mdots 0 SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00 Reading alignment file tmp_5-a.mult (485 sequences, 211 columns) as A2M alignment. Reading scores from file tmp_5-a.mstat Writing sequence output to tmp_5-a-sort.a2m. @@@@ cat m0.a2m tmp_5-a-sort.a2m > tmp_5-a.train.seq @@@@ cat m0.cst tmp_5-a-md.cst > tmp_5-a.train.cst @@@@ cp tmp_5-a.train.seq /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.a2m @@@@ cp tmp_5-a.train.cst /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.cst @@@@ rm -rf /projects/compbio/tmp/target2k-cc69-21398 < /dev/null gzip -f T0136.t2k.a2m /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "SAM_T02 multiple alignment in a2m format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.a2m.gz T0136.t2k.a2m.gz >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html gunzip -c T0136.t2k.a2m.gz > tmp.a2m /projects/compbio/bin/scripts/a2m2html -a2m_in tmp.a2m > T0136.t2k.pa.html SAM: /projects/compbio/bin/i686/prettyalign v3.3.2 (February, 2001) compiled 06/24/02_10:51:09 rm tmp.a2m /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "SAM_T02 multiple alignment in pretty html format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.pa.html T0136.t2k.pa.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/w0.5 T0136.t2k.a2m.gz T0136.t2k-w0.5.mod.tmp @@@@ chgrp protein /var/tmp/tmp-build-weighted-model-cc69-21622 @@@@ uniqueseq /var/tmp/tmp-build-weighted-model-cc69-21622/tmp -alignfile T0136.t2k.a2m.gz \ -a protein -percent_id 0.8 SAM: uniqueseq v3.3.2 (February, 2001) compiled 06/24/02_10:53:16 gunzip: stdout: Broken pipe gunzip: stdout: Broken pipe Reading alignment file T0136.t2k.a2m.gz (486 sequences, 211 columns) as A2M alignment. Writing sequence output to /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m. Dropping 62 (of 486) duplicate sequences with differing IDs Dropping 213 (of 486) sequences with > 80.0% id 211 sequences left after dropping 275 of 486 sequences. @@@@ modelfromalign /var/tmp/tmp-build-weighted-model-cc69-21622/tmp -alignfile /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m \ -insert /projects/compbio/lib/fssp-trained.regularizer \ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -prior_library /projects/compbio/lib/recode3.20comp \ -binary_output 1 -a protein -aweight_method 1 -aweight_bits 0.5 -aweight_exponent 10 Reading parameter file /projects/compbio/lib/fssp-trained.regularizer /projects/compbio/lib/fssp-trained.regularizer(1): Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP SAM: modelfromalign v3.3.2 (February, 2001) compiled 06/24/02_10:50:57 Reading alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m (211 sequences, 211 columns) as A2M alignment. @@@@ cp -f /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.mod T0136.t2k-w0.5.mod.tmp @@@@ rm -rf /var/tmp/tmp-build-weighted-model-cc69-21622 > /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Secondary Structure Prediction" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/uniqueseq unique-tmp -alignfile T0136.t2k.a2m.gz -percent_id 0.90 SAM: /projects/compbio/bin/i686/uniqueseq v3.3.2 (February, 2001) compiled 06/24/02_10:53:16 gunzip: stdout: Broken pipe gunzip: stdout: Broken pipe Reading alignment file T0136.t2k.a2m.gz (486 sequences, 211 columns) as A2M alignment. Writing sequence output to unique-tmp.a2m. Dropping 62 (of 486) duplicate sequences with differing IDs Dropping 142 (of 486) sequences with > 90.0% id 282 sequences left after dropping 204 of 486 sequences. gzip -9f unique-tmp.a2m mv unique-tmp.a2m.gz T0136.t2k-thin90.a2m.gz echo ReadNeuralNet /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/networks/t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net > tmp.script echo ReadA2M T0136.t2k-thin90.a2m.gz >> tmp.script echo PrintPrediction T0136.t2k.dssp-ebghstl 4069-6308-1312 >> tmp.script echo PrintPredictionFasta T0136.t2k.dssp-ebghstl.seq >> tmp.script echo PrintRDB T0136.t2k.dssp-ebghstl.rdb >> tmp.script /cse/faculty/karplus/dna/predict-2nd/predict-2nd < tmp.script # command:# Neural network set to t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net # command:# Reading A2M format from T0136.t2k-thin90.a2m.gz # Using SequenceWeight HenikoffWeight(-1, 1) # requested less than 0 bits saved, using initial weights # After reading T0136.t2k-thin90.a2m.gz, have 211 columns in 1 chains # command:# Initializing Gain for EBGHTL # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # Printing prediction to T0136.t2k.dssp-ebghstl # command:# Network initialization done # Printing prediction in FASTA format to T0136.t2k.dssp-ebghstl.seq # command:# Network initialization done # Printing prediction to T0136.t2k.dssp-ebghstl.rdb # command:rm tmp.script /projects/compbio/experiments/models.97/scripts/2nd-rdb-to-sam-model -alphabet EBGHSTL T0136.t2k.dssp-ebghstl.rdb T0136.t2k.dssp-ebghstl.mod /projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry -pdb T0136.blank.pdb < T0136.t2k.dssp-ebghstl.seq > T0136.t2k.dssp-color.rasmol ln -sf T0136.t2k.dssp-color.rasmol dssp /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP EBGHSTL structure prediction CASP format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl T0136.t2k.dssp-ebghstl >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP EBGHSTL structure prediction RDB format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.rdb T0136.t2k.dssp-ebghstl.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP EBGHSTL structure prediction sequence format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq T0136.t2k.dssp-ebghstl.seq >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html echo ReadNeuralNet /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/networks/t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-stride-seeded.net > tmp.script echo ReadA2M T0136.t2k-thin90.a2m.gz >> tmp.script echo PrintPrediction T0136.t2k.stride-ebghtl >> tmp.script echo PrintPredictionFasta T0136.t2k.stride-ebghtl.seq >> tmp.script echo PrintRDB T0136.t2k.stride-ebghtl.rdb >> tmp.script /cse/faculty/karplus/dna/predict-2nd/predict-2nd < tmp.script # command:# Neural network set to t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # command:# Reading A2M format from T0136.t2k-thin90.a2m.gz # Using SequenceWeight HenikoffWeight(-1, 1) # requested less than 0 bits saved, using initial weights # After reading T0136.t2k-thin90.a2m.gz, have 211 columns in 1 chains # command:# Initializing Gain for EBGHTL # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # Printing prediction to T0136.t2k.stride-ebghtl # command:# Network initialization done # Printing prediction in FASTA format to T0136.t2k.stride-ebghtl.seq # command:# Network initialization done # Printing prediction to T0136.t2k.stride-ebghtl.rdb # command:rm tmp.script /projects/compbio/experiments/models.97/scripts/2nd-rdb-to-sam-model -alphabet EBGHTL T0136.t2k.stride-ebghtl.rdb T0136.t2k.stride-ebghtl.mod /projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry -pdb T0136.blank.pdb < T0136.t2k.stride-ebghtl.seq > T0136.t2k.stride-color.rasmol ln -sf T0136.t2k.stride-color.rasmol stride /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Stride EBGHTL structure prediction CASP format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl T0136.t2k.stride-ebghtl >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Stride EBGHTL structure prediction RDB format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.rdb T0136.t2k.stride-ebghtl.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Stride EBGHTL structure prediction sequence format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq T0136.t2k.stride-ebghtl.seq >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html echo ReadAlphabet /projects/compbio/lib/alphabet/str.alphabet > tmp.script echo ReadNeuralNet /projects/compbio2/usr/karplus/predict-2nd/testing/str/networks/t2k-5651-IDaaHr-5-15-7-15-9-15-13-str-seeded.net >> tmp.script echo ReadA2M T0136.t2k-thin90.a2m.gz >> tmp.script echo PrintPrediction T0136.t2k.str >> tmp.script echo PrintPredictionFasta T0136.t2k.str.seq >> tmp.script echo PrintRDB T0136.t2k.str.rdb >> tmp.script /cse/faculty/karplus/dna/predict-2nd/predict-2nd < tmp.script # command:# Read 2 alphabets from /projects/compbio/lib/alphabet/str.alphabet # command:# Neural network set to t2k-5651-IDaaHr-5-15-7-15-9-15-13-str-seeded.net # command:# Reading A2M format from T0136.t2k-thin90.a2m.gz # Using SequenceWeight HenikoffWeight(-1, 1) # requested less than 0 bits saved, using initial weights # After reading T0136.t2k-thin90.a2m.gz, have 211 columns in 1 chains # command:# Initializing Gain for str # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # Printing prediction to T0136.t2k.str # command:# Network initialization done # Printing prediction in FASTA format to T0136.t2k.str.seq # command:# Network initialization done # Printing prediction to T0136.t2k.str.rdb # command:rm tmp.script /projects/compbio/experiments/models.97/scripts/2nd-rdb-to-sam-model -alphabet STR T0136.t2k.str.rdb T0136.t2k.str.mod /projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry -pdb T0136.blank.pdb < T0136.t2k.str.seq > T0136.t2k.str-color.rasmol ln -sf T0136.t2k.str-color.rasmol str /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Str structure prediction CASP format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str T0136.t2k.str >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Str structure prediction RDB format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.rdb T0136.t2k.str.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Str structure prediction sequence format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq T0136.t2k.str.seq >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html echo ReadAlphabet /projects/compbio/lib/alphabet/alpha.alphabet > tmp.script echo ReadNeuralNet /projects/compbio2/usr/karplus/predict-2nd/testing/alpha/networks/t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net >> tmp.script echo ReadA2M T0136.t2k-thin90.a2m.gz >> tmp.script echo PrintPrediction T0136.t2k.alpha >> tmp.script echo PrintPredictionFasta T0136.t2k.alpha.seq >> tmp.script echo PrintRDB T0136.t2k.alpha.rdb >> tmp.script /cse/faculty/karplus/dna/predict-2nd/predict-2nd < tmp.script # command:# Read 3 alphabets from /projects/compbio/lib/alphabet/alpha.alphabet # command:# Neural network set to t2k-5651-IDaaHr-5-15-7-15-9-15-13-alpha-seeded.net # command:# Reading A2M format from T0136.t2k-thin90.a2m.gz # Using SequenceWeight HenikoffWeight(-1, 1) # requested less than 0 bits saved, using initial weights # After reading T0136.t2k-thin90.a2m.gz, have 211 columns in 1 chains # command:# Initializing Gain for alpha # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # Printing prediction to T0136.t2k.alpha # command:# Network initialization done # Printing prediction in FASTA format to T0136.t2k.alpha.seq # command:# Network initialization done # Printing prediction to T0136.t2k.alpha.rdb # command:rm tmp.script /projects/compbio/experiments/models.97/scripts/2nd-rdb-to-sam-model -alphabet ALPHA T0136.t2k.alpha.rdb T0136.t2k.alpha.mod /projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry -pdb T0136.blank.pdb < T0136.t2k.alpha.seq > T0136.t2k.alpha-color.rasmol ln -sf T0136.t2k.alpha-color.rasmol alpha /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Alpha angle prediction RDB format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.alpha.rdb T0136.t2k.alpha.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Alpha angle prediction sequence format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.alpha.seq T0136.t2k.alpha.seq >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/RDBCombine T0136.t2k.dssp-ebghstl.rdb T0136.t2k.stride-ebghtl.rdb T0136.t2k.str.rdb T0136.t2k.alpha.rdb -a 4069-6308-1312 > T0136.t2k.dssp_ehl2.rdb /projects/compbio/experiments/casp5/scripts-human/rdb2casp T0136.t2k.dssp_ehl2.rdb 4069-6308-1312 > T0136.t2k.dssp_ehl2 /projects/compbio/experiments/models.97/scripts/2nd-rdb-to-sam-model -alphabet EHL2 T0136.t2k.dssp_ehl2.rdb T0136.t2k.dssp_ehl2.mod /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP 3-value prediction RDB format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp_ehl2.rdb T0136.t2k.dssp_ehl2.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Sequence Logos" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.w0.5-logo -i T0136.t2k-w0.5.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k w0.5" \ -logo_caption_f T0136.t2k.dssp-ebghstl.seq \ -logo_under_file T0136.a2m Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "SAM_T02 multiple alignment in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.w0.5-logo.eps T0136.t2k.w0.5-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.dssp-ebghstl-logo -i T0136.t2k.dssp-ebghstl.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k EBGHSTL" \ -logo_caption_f T0136.t2k.dssp-ebghstl.seq \ -logo_under_file T0136.a2m \ -logo_color_file /projects/compbio/lib/stride.colors Reading parameter file T0136.t2k.dssp-ebghstl.mod T0136.t2k.dssp-ebghstl.mod(3): Reading MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP EBGHSTL structure prediction in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl-logo.eps T0136.t2k.dssp-ebghstl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.stride-ebghtl-logo -i T0136.t2k.stride-ebghtl.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k EBGHTL" \ -logo_caption_f T0136.t2k.stride-ebghtl.seq \ -logo_under_file T0136.a2m \ -logo_color_file /projects/compbio/lib/stride.colors Reading parameter file T0136.t2k.stride-ebghtl.mod T0136.t2k.stride-ebghtl.mod(3): Reading MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Stride EBGHTL structure prediction in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl-logo.eps T0136.t2k.stride-ebghtl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.str-logo -i T0136.t2k.str.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k STR" \ -logo_caption_f T0136.t2k.str.seq \ -logo_under_file T0136.a2m \ -logo_color_file /projects/compbio/lib/str.colors Reading parameter file T0136.t2k.str.mod T0136.t2k.str.mod(3): Reading MODEL -- Model from 2nd structure file T0136.t2k.str.rdb SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Str structure prediction in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str-logo.eps T0136.t2k.str-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.alpha-logo -i T0136.t2k.alpha.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k ALPHA" \ -logo_caption_f T0136.t2k.alpha.seq \ -logo_under_file T0136.a2m \ -logo_color_file /projects/compbio/lib/alpha.colors Reading parameter file T0136.t2k.alpha.mod T0136.t2k.alpha.mod(3): Reading MODEL -- Model from 2nd structure file T0136.t2k.alpha.rdb SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Alpha angle prediction in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.alpha-logo.eps T0136.t2k.alpha-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/makelogo T0136.t2k.dssp_ehl2-logo -i T0136.t2k.dssp_ehl2.mod \ -logo_rel_entropy 1 \ -logo_bars_per_line 50 -logo_title "T0136.t2k DSSP_EHL2" \ -logo_caption_f T0136.t2k.dssp-ebghstl.seq \ -logo_under_file T0136.a2m \ -logo_color_file /projects/compbio/lib/dssp.colors Reading parameter file T0136.t2k.dssp_ehl2.mod T0136.t2k.dssp_ehl2.mod(3): Reading MODEL -- Model from 2nd structure file T0136.t2k.dssp_ehl2.rdb SAM: /projects/compbio/bin/i686/makelogo v3.3.2 (February, 2001) compiled 07/18/02_10:30:08 % Sequence-model (global) (SW = 0) /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "DSSP 3-value prediction in sequence logo format" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp_ehl2-logo.eps T0136.t2k.dssp_ehl2-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Target model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/hmmscore T0136.t2k-100-30-str \ -calibrate 1 \ -alphabet protein,STR \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.str.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.strs \ -trackcoeff 1.0,0.3 \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-100-30-str.mlib (calibrate = 1). Scoring model T0136.t2k-100-30-str T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-100-30-str calibrated to tau=0.7212 and lambda=1.6848 . Average NLL-Simple NULL score: -23.271166 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-100-30-str.dist /projects/compbio/bin/i686/hmmscore strfoo \ -modellibrary T0136.t2k-100-30-str.mlib \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.strs \ -db_size 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) ....... Average NLL-Simple NULL score: -23.271170 Database has 6516 sequences with 1546281 residues. mv -f strfoo.1.T0136.t2k-100-30-str.dist T0136.t2k-100-30-str.dist /projects/compbio/bin/i686/hmmscore T0136.t2k-100-30-dssp-ebghstl \ -calibrate 1 \ -alphabet protein,EBGHSTL \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.dssp-ebghstl.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \ -trackcoeff 1.0,0.3 \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-100-30-dssp-ebghstl.mlib (calibrate = 1). Scoring model T0136.t2k-100-30-dssp-ebghstl T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-100-30-dssp-ebghstl calibrated to tau=0.7813 and lambda=1.4433 . Average NLL-Simple NULL score: -22.803276 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-100-30-dssp-ebghstl.dist /projects/compbio/bin/i686/hmmscore dsspfoo \ -modellibrary T0136.t2k-100-30-dssp-ebghstl.mlib \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \ -db_size 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) ....... Average NLL-Simple NULL score: -22.803276 Database has 6516 sequences with 1546281 residues. mv -f dsspfoo.1.T0136.t2k-100-30-dssp-ebghstl.dist T0136.t2k-100-30-dssp-ebghstl.dist /projects/compbio/bin/i686/hmmscore T0136.t2k-100-30-stride-ebghtl \ -calibrate 1 \ -alphabet protein,EBGHTL \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.stride-ebghtl.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.2ds \ -trackcoeff 1.0,0.3 \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-100-30-stride-ebghtl.mlib (calibrate = 1). Scoring model T0136.t2k-100-30-stride-ebghtl T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-100-30-stride-ebghtl calibrated to tau=0.8341 and lambda=1.1734 . Average NLL-Simple NULL score: -23.079868 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-100-30-stride-ebghtl.dist /projects/compbio/bin/i686/hmmscore stridefoo \ -modellibrary T0136.t2k-100-30-stride-ebghtl.mlib \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.2ds \ -db_size 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) ....... Average NLL-Simple NULL score: -23.079868 Database has 6516 sequences with 1546281 residues. mv -f stridefoo.1.T0136.t2k-100-30-stride-ebghtl.dist T0136.t2k-100-30-stride-ebghtl.dist /projects/compbio/bin/i686/hmmscore T0136.t2k-100-30-alpha \ -calibrate 1 \ -alphabet protein,ALPHA \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.alpha.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.alphas \ -trackcoeff 1.0,0.3 \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-100-30-alpha.mlib (calibrate = 1). Scoring model T0136.t2k-100-30-alpha T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.alpha.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.alpha.rdb Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-100-30-alpha calibrated to tau=0.7205 and lambda=2.2674 . Average NLL-Simple NULL score: -21.464344 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-100-30-alpha.dist /projects/compbio/bin/i686/hmmscore alphafoo \ -modellibrary T0136.t2k-100-30-alpha.mlib \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.alphas \ -db_size 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Scoring model T0136.t2k-100-30-alpha (T0136.t2k-100-30-alpha model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.alpha.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.alpha.rdb Calculating Distances (. = 1000 sequences) ....... Average NLL-Simple NULL score: -21.464348 Database has 6516 sequences with 1546281 residues. mv -f alphafoo.1.T0136.t2k-100-30-alpha.dist T0136.t2k-100-30-alpha.dist /projects/compbio/bin/i686/hmmscore T0136.t2k-100-30-dssp_ehl2 \ -calibrate 1 \ -alphabet protein,EHL2 \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.dssp_ehl2.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \ -trackcoeff 1.0,0.3 \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-100-30-dssp_ehl2.mlib (calibrate = 1). Scoring model T0136.t2k-100-30-dssp_ehl2 T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp_ehl2.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp_ehl2.rdb Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-100-30-dssp_ehl2 calibrated to tau=0.7865 and lambda=1.3061 . Average NLL-Simple NULL score: -22.839809 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-100-30-dssp_ehl2.dist /projects/compbio/bin/i686/hmmscore dssp_ehl2foo \ -modellibrary T0136.t2k-100-30-dssp_ehl2.mlib \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \ -db_size 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Scoring model T0136.t2k-100-30-dssp_ehl2 (T0136.t2k-100-30-dssp_ehl2 model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp_ehl2.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp_ehl2.rdb Calculating Distances (. = 1000 sequences) ....... Average NLL-Simple NULL score: -22.839813 Database has 6516 sequences with 1546281 residues. mv -f dssp_ehl2foo.1.T0136.t2k-100-30-dssp_ehl2.dist T0136.t2k-100-30-dssp_ehl2.dist /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-dssp-ebghstl < T0136.t2k-100-30-dssp-ebghstl.dist > T0136.t2k-100-30-dssp-ebghstl-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-100-30-dssp-ebghstl-scores < T0136.t2k-100-30-dssp-ebghstl-scores.rdb > T0136.t2k-100-30-dssp-ebghstl-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid/100-30-dssp-ebghstl two-track target model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl-scores.html \ T0136.t2k-100-30-dssp-ebghstl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-stride-ebghtl < T0136.t2k-100-30-stride-ebghtl.dist > T0136.t2k-100-30-stride-ebghtl-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-100-30-stride-ebghtl-scores < T0136.t2k-100-30-stride-ebghtl-scores.rdb > T0136.t2k-100-30-stride-ebghtl-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid/100-30-stride-ebghtl two-track target model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl-scores.html \ T0136.t2k-100-30-stride-ebghtl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-str < T0136.t2k-100-30-str.dist > T0136.t2k-100-30-str-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-100-30-str-scores < T0136.t2k-100-30-str-scores.rdb > T0136.t2k-100-30-str-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid/100-30-str two-track target model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str-scores.html \ T0136.t2k-100-30-str-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-alpha < T0136.t2k-100-30-alpha.dist > T0136.t2k-100-30-alpha-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-100-30-alpha-scores < T0136.t2k-100-30-alpha-scores.rdb > T0136.t2k-100-30-alpha-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid/100-30-alpha two-track target model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-alpha-scores.html \ T0136.t2k-100-30-alpha-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-dssp_ehl2 < T0136.t2k-100-30-dssp_ehl2.dist > T0136.t2k-100-30-dssp_ehl2-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-100-30-dssp_ehl2-scores < T0136.t2k-100-30-dssp_ehl2-scores.rdb > T0136.t2k-100-30-dssp_ehl2-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid/100-30-dssp_ehl2 two-track target model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp_ehl2-scores.html \ T0136.t2k-100-30-dssp_ehl2-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/hmmscore T0136.t2k-w0.5 \ -calibrate 1 \ -i T0136.t2k-w0.5.mod \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs \ -sw 2 -dpstyle 0 -subtract_null 4 \ -select_score 0 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-w0.5.mlib (calibrate = 1). Scoring model T0136.t2k-w0.5.mod Calibrating to sequence database. Calculating Distances (. = 1000 sequences) Model T0136.t2k-w0.5.mod calibrated to tau=0.7509 and lambda=1.9939 . Average NLL-Simple NULL score: -21.165609 Database has 6516 sequences with 1546281 residues. rm -f T0136.t2k-w0.5.dist /projects/compbio/bin/i686/hmmscore w0.5foo \ -modellibrary T0136.t2k-w0.5.mlib \ -db /projects/compbio/experiments/protein-predict/SAM_T02/data/pdbaa \ -dbsize 6014 \ -select_score 4 -Emax 40. SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) .............. Average NLL-Simple NULL score: -20.640068 Database has 13369 sequences with 2966201 residues. mv -f w0.5foo.1.T0136.t2k-w0.5.mod.dist T0136.t2k-w0.5.dist /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-w0.5 < T0136.t2k-w0.5.dist > T0136.t2k-w0.5-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.t2k-w0.5-scores < T0136.t2k-w0.5-scores.rdb > T0136.t2k-w0.5-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated amino acid single-track target model scores of PDB" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5-scores.html \ T0136.t2k-w0.5-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Template model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/hmmscore.new T0136.template-lib -modellibrary /projects/compbio/experiments/models.97/indexes/t2k-w0.5-db.mlib \ -db_size 6014 \ -db T0136.a2m -rdb 1 \ -select_score 4 -Emax 40 SAM: /projects/compbio/bin/i686/hmmscore.new v3.3.2 (February, 2001) compiled 07/30/02_10:12:06 Found found modlib 1 /projects/compbio/experiments/models.97/indexes/t2k-w0.5-db.mlib Opening T0136.template-lib.dist-rdb for RDB distance output /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod(22): Reading nostruct-align/1kwfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22568/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod (nostruct-align/1kwfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Track 0 FIMs added (geometric mean of match probabilities (6)) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.751852 /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod(21): Reading nostruct-align/1qgrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod (nostruct-align/1qgrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.467873 /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod(22): Reading nostruct-align/2pil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod (nostruct-align/2pil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.164885 /projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod(22): Reading nostruct-align/1qgrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod (nostruct-align/1qgrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.617870 /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod(21): Reading nostruct-align/1dtyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3231/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod (nostruct-align/1dtyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.676830 /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod(22): Reading nostruct-align/1aquA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod (nostruct-align/1aquA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.275858 /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod(22): Reading nostruct-align/1vcaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod (nostruct-align/1vcaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.707869 /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod(21): Reading nostruct-align/1bo9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod (nostruct-align/1bo9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.218836 /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod(21): Reading nostruct-align/3hhrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-11870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod (nostruct-align/3hhrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.537857 /projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod(22): Reading nostruct-align/1jlnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod (nostruct-align/1jlnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.391851 /projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod(22): Reading nostruct-align/1j9lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-762/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod (nostruct-align/1j9lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.118845 /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod(22): Reading nostruct-align/1g6hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod (nostruct-align/1g6hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.340866 /projects/compbio/experiments/models.97/pdb/1k/1k5rA/nostruct-align/1k5rA.t2k-w0.5.mod(22): Reading nostruct-align/1k5rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5rA/nostruct-align/1k5rA.t2k-w0.5.mod (nostruct-align/1k5rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k5rA/nostruct-align/1k5rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.602859 /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod(21): Reading nostruct-align/1budA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod (nostruct-align/1budA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.794836 /projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod(21): Reading nostruct-align/5ldh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod (nostruct-align/5ldh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.893841 /projects/compbio/experiments/models.97/pdb/1j/1jsxA/nostruct-align/1jsxA.t2k-w0.5.mod(22): Reading nostruct-align/1jsxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsxA/nostruct-align/1jsxA.t2k-w0.5.mod (nostruct-align/1jsxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsxA/nostruct-align/1jsxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.300869 /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod(21): Reading nostruct-align/8ohm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-18237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod (nostruct-align/8ohm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.593855 /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod(22): Reading nostruct-align/1eblA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-21711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod (nostruct-align/1eblA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.792841 /projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod(22): Reading nostruct-align/1eblB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22698/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod (nostruct-align/1eblB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.807865 /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod(21): Reading nostruct-align/1gr2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8125/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod (nostruct-align/1gr2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.782860 /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod(21): Reading nostruct-align/1tdj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod (nostruct-align/1tdj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.866884 /projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod(21): Reading nostruct-align/1ek4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod (nostruct-align/1ek4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.921865 /projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod(21): Reading nostruct-align/1f48A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17689/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod (nostruct-align/1f48A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.478874 /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod(21): Reading nostruct-align/1ndoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod (nostruct-align/1ndoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.289871 /projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod(22): Reading nostruct-align/1as4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod (nostruct-align/1as4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.027842 /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod(21): Reading nostruct-align/1ndoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod (nostruct-align/1ndoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.964884 /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod(21): Reading nostruct-align/1erd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod (nostruct-align/1erd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.080828 /projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod(21): Reading nostruct-align/1c14A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod (nostruct-align/1c14A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.700853 /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod(22): Reading nostruct-align/1as4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4120/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod (nostruct-align/1as4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.585865 /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod(22): Reading nostruct-align/1vcbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8417/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod (nostruct-align/1vcbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.816874 /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod(21): Reading nostruct-align/1vcbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-20321/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod (nostruct-align/1vcbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.681839 /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod(22): Reading nostruct-align/1vcbC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod (nostruct-align/1vcbC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.960871 /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod(22): Reading nostruct-align/1cjaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7838/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod (nostruct-align/1cjaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.765833 /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod(21): Reading nostruct-align/1erp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-21851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod (nostruct-align/1erp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.824879 /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod(22): Reading nostruct-align/1bueA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod (nostruct-align/1bueA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.780882 /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod(22): Reading nostruct-align/1ebmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27978/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod (nostruct-align/1ebmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.643845 /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod(22): Reading nostruct-align/1a0aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod (nostruct-align/1a0aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.543884 /projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod(22): Reading nostruct-align/1iawA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30261/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod (nostruct-align/1iawA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.957830 /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod(21): Reading nostruct-align/1erv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24202/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod (nostruct-align/1erv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.550831 /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod(21): Reading nostruct-align/1cqkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25801/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod (nostruct-align/1cqkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.787868 /projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod(22): Reading nostruct-align/1gpuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod (nostruct-align/1gpuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.089846 /projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod(22): Reading nostruct-align/1gr3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod (nostruct-align/1gr3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.709831 /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod(21): Reading nostruct-align/1erw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-11485/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod (nostruct-align/1erw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.727856 /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod(21): Reading nostruct-align/3egf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod (nostruct-align/3egf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.096876 /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod(21): Reading nostruct-align/1ery.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod (nostruct-align/1ery.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.804848 /projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod(21): Reading nostruct-align/1hn9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12716/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod (nostruct-align/1hn9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.882837 /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod(21): Reading nostruct-align/1lldA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-10484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod (nostruct-align/1lldA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.046850 /projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod(21): Reading nostruct-align/1eiwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-27291/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod (nostruct-align/1eiwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.107870 /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod(22): Reading nostruct-align/1e6uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod (nostruct-align/1e6uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.659872 /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod(21): Reading nostruct-align/1ten.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod (nostruct-align/1ten.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.614876 /projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod(22): Reading nostruct-align/1kwhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod (nostruct-align/1kwhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.725843 /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod(21): Reading nostruct-align/1qgtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-6052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod (nostruct-align/1qgtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.524839 /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod(21): Reading nostruct-align/1b3qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-3770/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod (nostruct-align/1b3qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.260876 /projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod(21): Reading nostruct-align/1ter.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod (nostruct-align/1ter.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.881866 /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod(22): Reading nostruct-align/1esc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod (nostruct-align/1esc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.275829 /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod(22): Reading nostruct-align/1prxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod (nostruct-align/1prxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.023836 /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod(22): Reading nostruct-align/1prxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod (nostruct-align/1prxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.001856 /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod(21): Reading nostruct-align/2ayh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9234/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod (nostruct-align/2ayh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.612829 /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod(21): Reading nostruct-align/1esl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod (nostruct-align/1esl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.771833 /projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod(21): Reading nostruct-align/1cjbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod (nostruct-align/1cjbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.185848 /projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod(22): Reading nostruct-align/1khvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-18013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod (nostruct-align/1khvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.235853 /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod(21): Reading nostruct-align/1eso.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-8937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod (nostruct-align/1eso.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.190876 /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod(21): Reading nostruct-align/1ftpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-28774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod (nostruct-align/1ftpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.249886 /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod(22): Reading nostruct-align/2ahjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod (nostruct-align/2ahjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.595861 /projects/compbio/experiments/models.97/pdb/1l/1l1zA/nostruct-align/1l1zA.t2k-w0.5.mod(22): Reading nostruct-align/1l1zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1zA/nostruct-align/1l1zA.t2k-w0.5.mod (nostruct-align/1l1zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1zA/nostruct-align/1l1zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.902882 /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod(22): Reading nostruct-align/2ahjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod (nostruct-align/2ahjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.010849 /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod(21): Reading nostruct-align/1tfb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod (nostruct-align/1tfb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.183886 /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod(22): Reading nostruct-align/2ahjC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod (nostruct-align/2ahjC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.600847 /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod(21): Reading nostruct-align/1nscA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod (nostruct-align/1nscA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.299831 /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod(21): Reading nostruct-align/1ic6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod (nostruct-align/1ic6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.912865 /projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod(21): Reading nostruct-align/2bdpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-6479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod (nostruct-align/2bdpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.484869 /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod(22): Reading nostruct-align/1tfe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-971/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod (nostruct-align/1tfe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.359858 /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod(22): Reading nostruct-align/2plc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod (nostruct-align/2plc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.857876 /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod(21): Reading nostruct-align/1tfg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod (nostruct-align/1tfg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.481855 /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod(21): Reading nostruct-align/1do0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod (nostruct-align/1do0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.670856 /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod(21): Reading nostruct-align/1tfi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod (nostruct-align/1tfi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.116854 /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod(21): Reading nostruct-align/1ek6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod (nostruct-align/1ek6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.865866 /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod(21): Reading nostruct-align/1cz4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-26499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod (nostruct-align/1cz4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.510862 /projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod(21): Reading nostruct-align/1cxvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-16008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod (nostruct-align/1cxvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.359838 /projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod(22): Reading nostruct-align/1bftA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod (nostruct-align/1bftA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.407862 /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod(21): Reading nostruct-align/1qguA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod (nostruct-align/1qguA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.454845 /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod(21): Reading nostruct-align/1b3rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-8877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod (nostruct-align/1b3rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.181870 /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod(21): Reading nostruct-align/1qguB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2091/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod (nostruct-align/1qguB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.373878 /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod(22): Reading nostruct-align/1tfr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod (nostruct-align/1tfr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.280853 /projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod(21): Reading nostruct-align/1etc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28655/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod (nostruct-align/1etc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.648865 /projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod(21): Reading nostruct-align/1tfs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30494/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod (nostruct-align/1tfs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.460880 /projects/compbio/experiments/models.97/pdb/1k/1kamA/nostruct-align/1kamA.t2k-w0.5.mod(22): Reading nostruct-align/1kamA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kamA/nostruct-align/1kamA.t2k-w0.5.mod (nostruct-align/1kamA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kamA/nostruct-align/1kamA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.780848 /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod(22): Reading nostruct-align/2plt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod (nostruct-align/2plt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.776834 /projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod(21): Reading nostruct-align/3pghA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod (nostruct-align/3pghA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.955885 /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod(22): Reading nostruct-align/1cjcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod (nostruct-align/1cjcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.088840 /projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod(21): Reading nostruct-align/1ayaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod (nostruct-align/1ayaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.095863 /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod(22): Reading nostruct-align/4pah.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod (nostruct-align/4pah.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.079874 /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod(22): Reading nostruct-align/3mddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod (nostruct-align/3mddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.162888 /projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod(21): Reading nostruct-align/1exkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29984/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod (nostruct-align/1exkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.009876 /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod(22): Reading nostruct-align/1d3gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod (nostruct-align/1d3gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.798851 /projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod(21): Reading nostruct-align/6acn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-32419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod (nostruct-align/6acn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.598829 /projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod(22): Reading nostruct-align/1etu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod (nostruct-align/1etu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.769867 /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod(21): Reading nostruct-align/1a0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod (nostruct-align/1a0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.687872 /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod(22): Reading nostruct-align/1cqmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod (nostruct-align/1cqmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.754843 /projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod(21): Reading nostruct-align/1i05A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21356/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod (nostruct-align/1i05A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.516884 /projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod(22): Reading nostruct-align/1gpwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod (nostruct-align/1gpwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.065882 /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod(22): Reading nostruct-align/2cb5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3512/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod (nostruct-align/2cb5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.440887 /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod(21): Reading nostruct-align/1eiyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-16731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod (nostruct-align/1eiyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.509846 /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod(22): Reading nostruct-align/1iibA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod (nostruct-align/1iibA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.498863 /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod(22): Reading nostruct-align/1e85A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14726/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod (nostruct-align/1e85A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.603840 /projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod(21): Reading nostruct-align/1e6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27069/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod (nostruct-align/1e6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.149887 /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod(21): Reading nostruct-align/1cxwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-14518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod (nostruct-align/1cxwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.260828 /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod(21): Reading nostruct-align/1mhlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod (nostruct-align/1mhlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.273886 /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod(22): Reading nostruct-align/1qgvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod (nostruct-align/1qgvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.457880 /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod(21): Reading nostruct-align/1mhlC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod (nostruct-align/1mhlC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.502838 /projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod(22): Reading nostruct-align/1cd9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2067/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod (nostruct-align/1cd9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.302839 /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod(21): Reading nostruct-align/1cd9C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod (nostruct-align/1cd9C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.291868 /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod(21): Reading nostruct-align/1kanA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6757/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod (nostruct-align/1kanA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.617847 /projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod(21): Reading nostruct-align/1fmhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod (nostruct-align/1fmhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.811861 /projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod(21): Reading nostruct-align/1fmhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod (nostruct-align/1fmhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.840883 /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod(21): Reading nostruct-align/1cjdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod (nostruct-align/1cjdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.905859 /projects/compbio/experiments/models.97/pdb/1k/1kj6A/nostruct-align/1kj6A.t2k-w0.5.mod(22): Reading nostruct-align/1kj6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-4079/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kj6A/nostruct-align/1kj6A.t2k-w0.5.mod (nostruct-align/1kj6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kj6A/nostruct-align/1kj6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.998867 /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod(22): Reading nostruct-align/1khxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod (nostruct-align/1khxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.853886 /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod(21): Reading nostruct-align/3mdeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod (nostruct-align/3mdeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.126867 /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod(22): Reading nostruct-align/1g3p.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod (nostruct-align/1g3p.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.742853 /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod(21): Reading nostruct-align/1c17M.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod (nostruct-align/1c17M.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.598860 /projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod(22): Reading nostruct-align/1hetA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-31591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod (nostruct-align/1hetA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.924828 /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod(21): Reading nostruct-align/1eur.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod (nostruct-align/1eur.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.677870 /projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod(21): Reading nostruct-align/1d3hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod (nostruct-align/1d3hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.802872 /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod(22): Reading nostruct-align/1ftrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod (nostruct-align/1ftrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.684864 /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod(21): Reading nostruct-align/1buhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-1932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod (nostruct-align/1buhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.541845 /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod(21): Reading nostruct-align/1eut.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod (nostruct-align/1eut.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.541828 /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod(21): Reading nostruct-align/1pdgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-5022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod (nostruct-align/1pdgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.427862 /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod(21): Reading nostruct-align/1ebpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-18912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod (nostruct-align/1ebpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.084848 /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod(21): Reading nostruct-align/1nseA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7121/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod (nostruct-align/1nseA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.184870 /projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod(22): Reading nostruct-align/1iazA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod (nostruct-align/1iazA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.203888 /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod(21): Reading nostruct-align/1euu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-27942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod (nostruct-align/1euu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.758860 /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod(21): Reading nostruct-align/1pdgC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-28152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod (nostruct-align/1pdgC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.278841 /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod(21): Reading nostruct-align/2pna.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20949/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod (nostruct-align/2pna.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.081835 /projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod(21): Reading nostruct-align/1i06A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod (nostruct-align/1i06A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.270845 /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod(21): Reading nostruct-align/1thg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-18691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod (nostruct-align/1thg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.710855 /projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod(22): Reading nostruct-align/1dmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod (nostruct-align/1dmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.569881 /projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod(22): Reading nostruct-align/1ek8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod (nostruct-align/1ek8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.457878 /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod(22): Reading nostruct-align/1h2rL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26726/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod (nostruct-align/1h2rL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.955845 /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod(21): Reading nostruct-align/1thm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod (nostruct-align/1thm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.579882 /projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod(22): Reading nostruct-align/1iicA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20655/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod (nostruct-align/1iicA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.730841 /projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod(22): Reading nostruct-align/1i6aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod (nostruct-align/1i6aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.266857 /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod(21): Reading nostruct-align/2if1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12882/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod (nostruct-align/2if1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.927881 /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod(22): Reading nostruct-align/1b3tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-12475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod (nostruct-align/1b3tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.210869 /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod(22): Reading nostruct-align/1qgwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1621/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod (nostruct-align/1qgwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.966864 /projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod(22): Reading nostruct-align/1qgwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod (nostruct-align/1qgwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.989876 /projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod(21): Reading nostruct-align/1jeiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17755/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod (nostruct-align/1jeiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.652845 /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod(22): Reading nostruct-align/1qgwC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod (nostruct-align/1qgwC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.205841 /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod(21): Reading nostruct-align/1nf1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod (nostruct-align/1nf1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.586840 /projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod(22): Reading nostruct-align/1h2rS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod (nostruct-align/1h2rS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.721857 /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod(21): Reading nostruct-align/1as8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod (nostruct-align/1as8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.737875 /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod(22): Reading nostruct-align/1aqzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-19659/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod (nostruct-align/1aqzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.126881 /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod(21): Reading nostruct-align/1aqzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod (nostruct-align/1aqzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.119875 /projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod(22): Reading nostruct-align/1eqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod (nostruct-align/1eqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.395859 /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod(22): Reading nostruct-align/1thv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod (nostruct-align/1thv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.574865 /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod(21): Reading nostruct-align/1thw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod (nostruct-align/1thw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.554878 /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod(21): Reading nostruct-align/1thx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod (nostruct-align/1thx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.812883 /projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod(22): Reading nostruct-align/1j9qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30398/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod (nostruct-align/1j9qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.733866 /projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod(21): Reading nostruct-align/1exmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod (nostruct-align/1exmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.921883 /projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod(22): Reading nostruct-align/1k75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22321/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod (nostruct-align/1k75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.353834 /projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod(22): Reading nostruct-align/1heuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod (nostruct-align/1heuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.933861 /projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod(21): Reading nostruct-align/1hg3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod (nostruct-align/1hg3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.518875 /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod(21): Reading nostruct-align/1tia.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-18104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod (nostruct-align/1tia.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.034855 /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod(21): Reading nostruct-align/1tib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26483/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod (nostruct-align/1tib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.748837 /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod(21): Reading nostruct-align/1tcrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod (nostruct-align/1tcrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.629833 /projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod(22): Reading nostruct-align/1fv1C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod (nostruct-align/1fv1C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.223885 /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod(21): Reading nostruct-align/1tie.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-1664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod (nostruct-align/1tie.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.643852 /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod(21): Reading nostruct-align/1i07A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21552/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod (nostruct-align/1i07A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.059872 /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod(22): Reading nostruct-align/1tif.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod (nostruct-align/1tif.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.758835 /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod(22): Reading nostruct-align/1rrpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod (nostruct-align/1rrpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.851843 /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod(22): Reading nostruct-align/1tig.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod (nostruct-align/1tig.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.901886 /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod(22): Reading nostruct-align/1dmuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod (nostruct-align/1dmuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.593874 /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod(21): Reading nostruct-align/1ajqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod (nostruct-align/1ajqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.531836 /projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod(22): Reading nostruct-align/1l9fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod (nostruct-align/1l9fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.380873 /projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod(22): Reading nostruct-align/1ek9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod (nostruct-align/1ek9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.596828 /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod(21): Reading nostruct-align/1ajqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-17510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod (nostruct-align/1ajqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.923864 /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod(21): Reading nostruct-align/1e87A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod (nostruct-align/1e87A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.862829 /projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod(22): Reading nostruct-align/1e6yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod (nostruct-align/1e6yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.417871 /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod(21): Reading nostruct-align/1cxyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-22236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod (nostruct-align/1cxyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.089846 /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod(21): Reading nostruct-align/1tin.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-25981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod (nostruct-align/1tin.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.264883 /projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod(21): Reading nostruct-align/1e6yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod (nostruct-align/1e6yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.388828 /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod(21): Reading nostruct-align/1bh5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-20936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod (nostruct-align/1bh5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.700882 /projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod(22): Reading nostruct-align/1e6yC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5783/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod (nostruct-align/1e6yC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.466875 /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod(22): Reading nostruct-align/1b3uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod (nostruct-align/1b3uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.091839 /projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod(22): Reading nostruct-align/1qi6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod (nostruct-align/1qi6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.694828 /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod(21): Reading nostruct-align/1qgxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12697/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod (nostruct-align/1qgxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.614843 /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod(21): Reading nostruct-align/1tit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod (nostruct-align/1tit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.010860 /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod(21): Reading nostruct-align/1tiu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-16506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod (nostruct-align/1tiu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.010860 /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod(21): Reading nostruct-align/2por.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod (nostruct-align/2por.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.729832 /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod(21): Reading nostruct-align/1tiv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod (nostruct-align/1tiv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.244846 /projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod(21): Reading nostruct-align/1fmjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod (nostruct-align/1fmjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.638863 /projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod(22): Reading nostruct-align/1jltA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod (nostruct-align/1jltA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.678846 /projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod(22): Reading nostruct-align/1jltB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod (nostruct-align/1jltB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.600847 /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod(21): Reading nostruct-align/1unkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod (nostruct-align/1unkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.640875 /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod(22): Reading nostruct-align/1exnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod (nostruct-align/1exnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.858841 /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod(22): Reading nostruct-align/1exnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod (nostruct-align/1exnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.149858 /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod(21): Reading nostruct-align/1kapP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-30038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod (nostruct-align/1kapP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.485846 /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod(21): Reading nostruct-align/1a0fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4251/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod (nostruct-align/1a0fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.703865 /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod(22): Reading nostruct-align/1nsgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod (nostruct-align/1nsgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.802868 /projects/compbio/experiments/models.97/pdb/1g/1gr8A/nostruct-align/1gr8A.t2k-w0.5.mod(22): Reading nostruct-align/1gr8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr8A/nostruct-align/1gr8A.t2k-w0.5.mod (nostruct-align/1gr8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gr8A/nostruct-align/1gr8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.850882 /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod(21): Reading nostruct-align/2ifo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28016/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod (nostruct-align/2ifo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.300873 /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod(21): Reading nostruct-align/1lliA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod (nostruct-align/1lliA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.635838 /projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod(21): Reading nostruct-align/1al0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-6580/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod (nostruct-align/1al0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.859846 /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod(21): Reading nostruct-align/1iieA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod (nostruct-align/1iieA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.099884 /projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod(21): Reading nostruct-align/1i6cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32659/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod (nostruct-align/1i6cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.154854 /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod(22): Reading nostruct-align/1cxzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod (nostruct-align/1cxzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.049847 /projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod(21): Reading nostruct-align/1al0F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod (nostruct-align/1al0F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.207874 /projects/compbio/experiments/models.97/pdb/1k/1kwmA/nostruct-align/1kwmA.t2k-w0.5.mod(22): Reading nostruct-align/1kwmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-14473/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwmA/nostruct-align/1kwmA.t2k-w0.5.mod (nostruct-align/1kwmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwmA/nostruct-align/1kwmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.549833 /projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod(21): Reading nostruct-align/1qi7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod (nostruct-align/1qi7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.745888 /projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod(21): Reading nostruct-align/1al0G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-3572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod (nostruct-align/1al0G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.249846 /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod(22): Reading nostruct-align/1jekA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod (nostruct-align/1jekA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.454853 /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod(22): Reading nostruct-align/1jekB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod (nostruct-align/1jekB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.066839 /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod(21): Reading nostruct-align/1exg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9771/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod (nostruct-align/1exg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.134830 /projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod(22): Reading nostruct-align/1g6oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2899/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod (nostruct-align/1g6oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.802887 /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod(22): Reading nostruct-align/1k77A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod (nostruct-align/1k77A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.908857 /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod(22): Reading nostruct-align/1dfmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod (nostruct-align/1dfmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.817863 /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod(22): Reading nostruct-align/2igd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3956/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod (nostruct-align/2igd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.542839 /projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod(21): Reading nostruct-align/1hg5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod (nostruct-align/1hg5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.864883 /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod(22): Reading nostruct-align/1mai.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4630/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod (nostruct-align/1mai.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.083876 /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod(21): Reading nostruct-align/1mak.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod (nostruct-align/1mak.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.468830 /projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod(22): Reading nostruct-align/1ed1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10140/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod (nostruct-align/1ed1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.945856 /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod(21): Reading nostruct-align/5eat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26778/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod (nostruct-align/5eat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.635838 /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod(22): Reading nostruct-align/4kbpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4552/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod (nostruct-align/4kbpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.133854 /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod(21): Reading nostruct-align/1mal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod (nostruct-align/1mal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.961847 /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod(22): Reading nostruct-align/1cqqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod (nostruct-align/1cqqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.009838 /projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod(22): Reading nostruct-align/4pep.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25167/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod (nostruct-align/4pep.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.043827 /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod(22): Reading nostruct-align/5eau.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9548/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod (nostruct-align/5eau.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.660879 /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod(21): Reading nostruct-align/1dmwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-27398/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod (nostruct-align/1dmwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.195866 /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod(22): Reading nostruct-align/1ajsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod (nostruct-align/1ajsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.166866 /projects/compbio/experiments/models.97/pdb/1l/1l9hA/nostruct-align/1l9hA.t2k-w0.5.mod(22): Reading nostruct-align/1l9hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-31146/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9hA/nostruct-align/1l9hA.t2k-w0.5.mod (nostruct-align/1l9hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l9hA/nostruct-align/1l9hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.363855 /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod(21): Reading nostruct-align/1mat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-8474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod (nostruct-align/1mat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.343845 /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod(21): Reading nostruct-align/1maz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod (nostruct-align/1maz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.427835 /projects/compbio/experiments/models.97/pdb/1k/1kc0A/nostruct-align/1kc0A.t2k-w0.5.mod(22): Reading nostruct-align/1kc0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29313/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kc0A/nostruct-align/1kc0A.t2k-w0.5.mod (nostruct-align/1kc0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kc0A/nostruct-align/1kc0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.867834 /projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod(21): Reading nostruct-align/1eqfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11478/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod (nostruct-align/1eqfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.288841 /projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod(22): Reading nostruct-align/1htjF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21672/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod (nostruct-align/1htjF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.956835 /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k-w0.5.mod(22): Reading nostruct-align/1jlvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k-w0.5.mod (nostruct-align/1jlvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.596859 /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod(21): Reading nostruct-align/1mba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod (nostruct-align/1mba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.446842 /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod(21): Reading nostruct-align/1mbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31602/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod (nostruct-align/1mbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.455872 /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod(22): Reading nostruct-align/1ayfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod (nostruct-align/1ayfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.483883 /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod(21): Reading nostruct-align/1mbe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod (nostruct-align/1mbe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.505888 /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod(21): Reading nostruct-align/1ayfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod (nostruct-align/1ayfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.408880 /projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod(22): Reading nostruct-align/1k78A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod (nostruct-align/1k78A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.569864 /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod(22): Reading nostruct-align/1dfnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod (nostruct-align/1dfnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.569881 /projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod(21): Reading nostruct-align/4pfk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-19227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod (nostruct-align/4pfk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.141830 /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod(21): Reading nostruct-align/1a0hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod (nostruct-align/1a0hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.627871 /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod(22): Reading nostruct-align/1pdkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-29234/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod (nostruct-align/1pdkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.813845 /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod(22): Reading nostruct-align/1cs0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod (nostruct-align/1cs0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.406879 /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod(21): Reading nostruct-align/1tle.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod (nostruct-align/1tle.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.402864 /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod(21): Reading nostruct-align/1cs0C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod (nostruct-align/1cs0C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.951849 /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod(21): Reading nostruct-align/1kpeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-26217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod (nostruct-align/1kpeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.124886 /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod(21): Reading nostruct-align/2ihl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod (nostruct-align/2ihl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.445868 /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod(21): Reading nostruct-align/1do6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod (nostruct-align/1do6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.089844 /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod(21): Reading nostruct-align/2prd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod (nostruct-align/2prd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.448866 /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod(21): Reading nostruct-align/1tlk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod (nostruct-align/1tlk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.148863 /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod(21): Reading nostruct-align/2prk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod (nostruct-align/2prk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.526865 /projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod(21): Reading nostruct-align/1g6q2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-8981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod (nostruct-align/1g6q2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.358854 /projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod(22): Reading nostruct-align/1qi9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24976/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod (nostruct-align/1qi9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.940828 /projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod(21): Reading nostruct-align/1f3aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod (nostruct-align/1f3aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.077827 /projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod(21): Reading nostruct-align/1tn3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod (nostruct-align/1tn3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.781879 /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod(21): Reading nostruct-align/1bncA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-10431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod (nostruct-align/1bncA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.793863 /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod(21): Reading nostruct-align/1bncB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-17708/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod (nostruct-align/1bncB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.805885 /projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod(21): Reading nostruct-align/1jn5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-28422/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod (nostruct-align/1jn5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.097834 /projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod(21): Reading nostruct-align/1jn5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod (nostruct-align/1jn5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.429882 /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod(22): Reading nostruct-align/1ezm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod (nostruct-align/1ezm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.739836 /projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod(22): Reading nostruct-align/1gk1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21418/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod (nostruct-align/1gk1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.838886 /projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod(21): Reading nostruct-align/1exqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-16275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod (nostruct-align/1exqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.329845 /projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod(22): Reading nostruct-align/1dfoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod (nostruct-align/1dfoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.063862 /projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod(22): Reading nostruct-align/1hg7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod (nostruct-align/1hg7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.714865 /projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod(21): Reading nostruct-align/1fv5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-5423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod (nostruct-align/1fv5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.899836 /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod(21): Reading nostruct-align/1ebuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-9571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod (nostruct-align/1ebuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.189852 /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod(22): Reading nostruct-align/1cs1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod (nostruct-align/1cs1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.441847 /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod(21): Reading nostruct-align/1sgpE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-4996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod (nostruct-align/1sgpE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.989840 /projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod(22): Reading nostruct-align/1cs1C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-29887/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod (nostruct-align/1cs1C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.464886 /projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod(22): Reading nostruct-align/1qb0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod (nostruct-align/1qb0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.466881 /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod(22): Reading nostruct-align/1sgpI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod (nostruct-align/1sgpI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.267864 /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod(21): Reading nostruct-align/3pvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod (nostruct-align/3pvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.250883 /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod(21): Reading nostruct-align/1tml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22598/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod (nostruct-align/1tml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.630833 /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod(22): Reading nostruct-align/1bh9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod (nostruct-align/1bh9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.438833 /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod(22): Reading nostruct-align/1bh9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14280/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod (nostruct-align/1bh9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.152864 /projects/compbio/experiments/models.97/pdb/1b/1b57A/nostruct-align/1b57A.t2k-w0.5.mod(22): Reading nostruct-align/1b57A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31136/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b57A/nostruct-align/1b57A.t2k-w0.5.mod (nostruct-align/1b57A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b57A/nostruct-align/1b57A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.591831 /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod(21): Reading nostruct-align/1jenA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod (nostruct-align/1jenA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.665850 /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod(21): Reading nostruct-align/1jenB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-24831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod (nostruct-align/1jenB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.889862 /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod(21): Reading nostruct-align/1bndA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod (nostruct-align/1bndA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.821844 /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod(21): Reading nostruct-align/1tmy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-24157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod (nostruct-align/1tmy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.450859 /projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod(21): Reading nostruct-align/1jlxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod (nostruct-align/1jlxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.773884 /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod(22): Reading nostruct-align/1mdc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-5039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod (nostruct-align/1mdc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.719841 /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod(21): Reading nostruct-align/2gp8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-21780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod (nostruct-align/2gp8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.336868 /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod(22): Reading nostruct-align/1ez0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod (nostruct-align/1ez0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.355846 /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod(21): Reading nostruct-align/1exrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod (nostruct-align/1exrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.503834 /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod(22): Reading nostruct-align/1hg8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23862/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod (nostruct-align/1hg8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.165882 /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod(21): Reading nostruct-align/1bunB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24685/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod (nostruct-align/1bunB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.971867 /projects/compbio/experiments/models.97/pdb/1j/1jtaA/nostruct-align/1jtaA.t2k-w0.5.mod(22): Reading nostruct-align/1jtaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtaA/nostruct-align/1jtaA.t2k-w0.5.mod (nostruct-align/1jtaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jtaA/nostruct-align/1jtaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.439861 /projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod(21): Reading nostruct-align/1a0jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod (nostruct-align/1a0jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.091883 /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod(22): Reading nostruct-align/1mdl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3332/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod (nostruct-align/1mdl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.914875 /projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod(21): Reading nostruct-align/1e12A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod (nostruct-align/1e12A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.154879 /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod(21): Reading nostruct-align/2pta.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17191/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod (nostruct-align/2pta.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.627842 /projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod(22): Reading nostruct-align/1kpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-2105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod (nostruct-align/1kpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.212841 /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod(21): Reading nostruct-align/2bb2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod (nostruct-align/2bb2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.513832 /projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod(21): Reading nostruct-align/1dmzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-32446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod (nostruct-align/1dmzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.014864 /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod(21): Reading nostruct-align/2ptd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod (nostruct-align/2ptd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.420879 /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod(21): Reading nostruct-align/1hmcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod (nostruct-align/1hmcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.914862 /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod(21): Reading nostruct-align/1hmcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod (nostruct-align/1hmcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.900887 /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod(21): Reading nostruct-align/1a7tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24174/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod (nostruct-align/1a7tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.707888 /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod(21): Reading nostruct-align/1a92A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod (nostruct-align/1a92A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.736868 /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod(22): Reading nostruct-align/2pth.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod (nostruct-align/2pth.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.158884 /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod(21): Reading nostruct-align/2bb8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17770/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod (nostruct-align/2bb8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.318829 /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod(21): Reading nostruct-align/1tnm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-11131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod (nostruct-align/1tnm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.914852 /projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod(22): Reading nostruct-align/1jeoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod (nostruct-align/1jeoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.172840 /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod(21): Reading nostruct-align/2ptl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod (nostruct-align/2ptl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.656837 /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod(21): Reading nostruct-align/1htmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod (nostruct-align/1htmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.118870 /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod(21): Reading nostruct-align/3nodB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod (nostruct-align/3nodB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.043873 /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod(22): Reading nostruct-align/2baa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod (nostruct-align/2baa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.203884 /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod(21): Reading nostruct-align/1tns.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod (nostruct-align/1tns.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.115871 /projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod(22): Reading nostruct-align/2aaiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod (nostruct-align/2aaiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.486876 /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod(21): Reading nostruct-align/1mea.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3998/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod (nostruct-align/1mea.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.664835 /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod(22): Reading nostruct-align/1jlyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod (nostruct-align/1jlyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.773884 /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod(22): Reading nostruct-align/3lzt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod (nostruct-align/3lzt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.473837 /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod(22): Reading nostruct-align/1g6sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod (nostruct-align/1g6sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.348873 /projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod(21): Reading nostruct-align/1ez1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23934/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod (nostruct-align/1ez1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.064850 /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod(22): Reading nostruct-align/1buoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod (nostruct-align/1buoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.628866 /projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod(21): Reading nostruct-align/1mek.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod (nostruct-align/1mek.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.613871 /projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod(21): Reading nostruct-align/1ed5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod (nostruct-align/1ed5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.184870 /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod(21): Reading nostruct-align/1pdnC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-3371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod (nostruct-align/1pdnC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.569883 /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod(21): Reading nostruct-align/1qb2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod (nostruct-align/1qb2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.449839 /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod(21): Reading nostruct-align/1toh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-11570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod (nostruct-align/1toh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.404882 /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod(21): Reading nostruct-align/1a93A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod (nostruct-align/1a93A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.919868 /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod(21): Reading nostruct-align/1tkaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-17480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod (nostruct-align/1tkaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.547857 /projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod(21): Reading nostruct-align/1iijA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod (nostruct-align/1iijA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.105885 /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod(21): Reading nostruct-align/1a93B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod (nostruct-align/1a93B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.314882 /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod(21): Reading nostruct-align/1ton.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-11044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod (nostruct-align/1ton.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.161835 /projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod(22): Reading nostruct-align/1jepA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod (nostruct-align/1jepA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.030844 /projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod(21): Reading nostruct-align/1top.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-2481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod (nostruct-align/1top.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.961870 /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22): Reading nostruct-align/1eqjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod (nostruct-align/1eqjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.993868 /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod(22): Reading nostruct-align/1trkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod (nostruct-align/1trkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.405861 /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod(21): Reading nostruct-align/2frvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod (nostruct-align/2frvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.788849 /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod(22): Reading nostruct-align/1mfa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-10679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod (nostruct-align/1mfa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.836845 /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod(21): Reading nostruct-align/2frvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod (nostruct-align/2frvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.395832 /projects/compbio/experiments/models.97/pdb/1g/1gk4A/nostruct-align/1gk4A.t2k-w0.5.mod(22): Reading nostruct-align/1gk4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk4A/nostruct-align/1gk4A.t2k-w0.5.mod (nostruct-align/1gk4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk4A/nostruct-align/1gk4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.151838 /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod(21): Reading nostruct-align/2ila.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-2943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod (nostruct-align/2ila.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.017828 /projects/compbio/experiments/models.97/pdb/1g/1gk4C/nostruct-align/1gk4C.t2k-w0.5.mod(22): Reading nostruct-align/1gk4C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk4C/nostruct-align/1gk4C.t2k-w0.5.mod (nostruct-align/1gk4C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk4C/nostruct-align/1gk4C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.917837 /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod(22): Reading nostruct-align/1extA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod (nostruct-align/1extA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.209837 /projects/compbio/experiments/models.97/pdb/1g/1gk4D/nostruct-align/1gk4D.t2k-w0.5.mod(22): Reading nostruct-align/1gk4D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6212/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk4D/nostruct-align/1gk4D.t2k-w0.5.mod (nostruct-align/1gk4D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk4D/nostruct-align/1gk4D.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.019871 /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod(22): Reading nostruct-align/1bupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod (nostruct-align/1bupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.720860 /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod(22): Reading nostruct-align/3tdt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod (nostruct-align/3tdt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.114843 /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod(22): Reading nostruct-align/2ilk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod (nostruct-align/2ilk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.058863 /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod(21): Reading nostruct-align/1tpg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod (nostruct-align/1tpg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.223845 /projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod(21): Reading nostruct-align/3erk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-22092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod (nostruct-align/3erk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.318871 /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod(21): Reading nostruct-align/1mh1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-30892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod (nostruct-align/1mh1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.054886 /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod(21): Reading nostruct-align/1mfs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16807/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod (nostruct-align/1mfs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.031879 /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod(21): Reading nostruct-align/2bby.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-15158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod (nostruct-align/2bby.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.999882 /projects/compbio/experiments/models.97/pdb/1l/1l9mA/nostruct-align/1l9mA.t2k-w0.5.mod(22): Reading nostruct-align/1l9mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9mA/nostruct-align/1l9mA.t2k-w0.5.mod (nostruct-align/1l9mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l9mA/nostruct-align/1l9mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.425886 /projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod(21): Reading nostruct-align/1a7vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod (nostruct-align/1a7vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.881861 /projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod(21): Reading nostruct-align/1ejaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod (nostruct-align/1ejaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.012850 /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod(21): Reading nostruct-align/1tpm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3630/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod (nostruct-align/1tpm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.296860 /projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod(21): Reading nostruct-align/1i6iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod (nostruct-align/1i6iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.972868 /projects/compbio/experiments/models.97/pdb/1k/1kwsA/nostruct-align/1kwsA.t2k-w0.5.mod(22): Reading nostruct-align/1kwsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwsA/nostruct-align/1kwsA.t2k-w0.5.mod (nostruct-align/1kwsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwsA/nostruct-align/1kwsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.702875 /projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod(21): Reading nostruct-align/1jeqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod (nostruct-align/1jeqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.879868 /projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod(21): Reading nostruct-align/1jeqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-27975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod (nostruct-align/1jeqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.096865 /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod(22): Reading nostruct-align/1svfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod (nostruct-align/1svfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.055845 /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod(22): Reading nostruct-align/1svfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod (nostruct-align/1svfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.637877 /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod(21): Reading nostruct-align/1c0aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod (nostruct-align/1c0aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.278843 /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod(21): Reading nostruct-align/1tpt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod (nostruct-align/1tpt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.142860 /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod(21): Reading nostruct-align/1r1bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod (nostruct-align/1r1bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.284851 /projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod(21): Reading nostruct-align/1kawA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod (nostruct-align/1kawA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.513861 /projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod(21): Reading nostruct-align/1eqkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod (nostruct-align/1eqkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.435879 /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod(22): Reading nostruct-align/1ir3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod (nostruct-align/1ir3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.466873 /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod(22): Reading nostruct-align/2bce.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-20011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod (nostruct-align/2bce.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.549881 /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod(21): Reading nostruct-align/1ughI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25977/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod (nostruct-align/1ughI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.033869 /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading nostruct-align/1j9yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.606888 /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod(22): Reading nostruct-align/1c7kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod (nostruct-align/1c7kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.701868 /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod(22): Reading nostruct-align/1g6uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod (nostruct-align/1g6uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.737864 /projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod(22): Reading nostruct-align/1ez3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1356/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod (nostruct-align/1ez3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.758848 /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod(21): Reading nostruct-align/1dfsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-18288/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod (nostruct-align/1dfsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.392834 /projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod(21): Reading nostruct-align/1ed7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod (nostruct-align/1ed7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.442829 /projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod(21): Reading nostruct-align/1jtdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-14038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod (nostruct-align/1jtdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.582844 /projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod(21): Reading nostruct-align/1e15A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2788/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod (nostruct-align/1e15A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.633846 /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod(21): Reading nostruct-align/1cqwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod (nostruct-align/1cqwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.146833 /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod(21): Reading nostruct-align/1mgn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod (nostruct-align/1mgn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.442871 /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod(21): Reading nostruct-align/1ajyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod (nostruct-align/1ajyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.971886 /projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod(22): Reading nostruct-align/1ejbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod (nostruct-align/1ejbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.340866 /projects/compbio/experiments/models.97/pdb/1g/1gxjA/nostruct-align/1gxjA.t2k-w0.5.mod(22): Reading nostruct-align/1gxjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-2089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gxjA/nostruct-align/1gxjA.t2k-w0.5.mod (nostruct-align/1gxjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gxjA/nostruct-align/1gxjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.486843 /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod(22): Reading nostruct-align/1ugiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod (nostruct-align/1ugiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.089886 /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod(22): Reading nostruct-align/8abp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod (nostruct-align/8abp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.534859 /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod(21): Reading nostruct-align/1pscA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12997/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod (nostruct-align/1pscA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.989847 /projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod(22): Reading nostruct-align/1kc6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod (nostruct-align/1kc6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.383854 /projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod(22): Reading nostruct-align/1k04A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod (nostruct-align/1k04A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.138884 /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod(21): Reading nostruct-align/1qoiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod (nostruct-align/1qoiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.486828 /projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod(22): Reading nostruct-align/1fo0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod (nostruct-align/1fo0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.262842 /projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod(21): Reading nostruct-align/1fo0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod (nostruct-align/1fo0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.220839 /projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod(21): Reading nostruct-align/1g84A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-16063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod (nostruct-align/1g84A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.990866 /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22): Reading nostruct-align/1bw0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod (nostruct-align/1bw0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.895845 /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod(21): Reading nostruct-align/1trb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod (nostruct-align/1trb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.257858 /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod(22): Reading nostruct-align/1ed8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod (nostruct-align/1ed8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.391844 /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod(21): Reading nostruct-align/1cs6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-6391/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod (nostruct-align/1cs6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.823887 /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod(21): Reading nostruct-align/1cqxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod (nostruct-align/1cqxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.198875 /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod(21): Reading nostruct-align/1ibcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29681/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod (nostruct-align/1ibcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.597853 /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod(21): Reading nostruct-align/2bds.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod (nostruct-align/2bds.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.828852 /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod(21): Reading nostruct-align/1ibcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod (nostruct-align/1ibcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.977888 /projects/compbio/experiments/models.97/pdb/1k/1kpkA/nostruct-align/1kpkA.t2k-w0.5.mod(22): Reading nostruct-align/1kpkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpkA/nostruct-align/1kpkA.t2k-w0.5.mod (nostruct-align/1kpkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpkA/nostruct-align/1kpkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.794828 /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod(21): Reading nostruct-align/1mho.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod (nostruct-align/1mho.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.556889 /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod(21): Reading nostruct-align/1mhu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod (nostruct-align/1mhu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.406843 /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading nostruct-align/1nzyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -36.126869 /projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod(22): Reading nostruct-align/1e7aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11332/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod (nostruct-align/1e7aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.665854 /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod(21): Reading nostruct-align/1aym1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod (nostruct-align/1aym1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.261843 /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod(21): Reading nostruct-align/1aym2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26762/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod (nostruct-align/1aym2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.003870 /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod(21): Reading nostruct-align/4icb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-7295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod (nostruct-align/4icb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.123857 /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod(21): Reading nostruct-align/2int.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod (nostruct-align/2int.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.825872 /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod(21): Reading nostruct-align/1aym3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-9361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod (nostruct-align/1aym3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.259888 /projects/compbio/experiments/models.97/pdb/1k/1ky3A/nostruct-align/1ky3A.t2k-w0.5.mod(22): Reading nostruct-align/1ky3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-30168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ky3A/nostruct-align/1ky3A.t2k-w0.5.mod (nostruct-align/1ky3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ky3A/nostruct-align/1ky3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.692854 /projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod(22): Reading nostruct-align/1aym4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod (nostruct-align/1aym4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.153847 /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod(22): Reading nostruct-align/1jg1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31010/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod (nostruct-align/1jg1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.190861 /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod(21): Reading nostruct-align/1dugA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod (nostruct-align/1dugA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.231873 /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod(21): Reading nostruct-align/8acn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-17238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod (nostruct-align/8acn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.682827 /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod(21): Reading nostruct-align/1psdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod (nostruct-align/1psdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.662836 /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod(21): Reading nostruct-align/1ipwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-3327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod (nostruct-align/1ipwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.864849 /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod(21): Reading nostruct-align/3tgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod (nostruct-align/3tgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.148888 /projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod(22): Reading nostruct-align/1qojA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod (nostruct-align/1qojA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.117874 /projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod(22): Reading nostruct-align/1fo1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod (nostruct-align/1fo1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.651878 /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod(21): Reading nostruct-align/1try.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod (nostruct-align/1try.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.058878 /projects/compbio/experiments/models.97/pdb/1g/1gk7A/nostruct-align/1gk7A.t2k-w0.5.mod(22): Reading nostruct-align/1gk7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk7A/nostruct-align/1gk7A.t2k-w0.5.mod (nostruct-align/1gk7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk7A/nostruct-align/1gk7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.364851 /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod(22): Reading nostruct-align/3tgl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod (nostruct-align/3tgl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.861856 /projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod(21): Reading nostruct-align/1dh3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-32616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod (nostruct-align/1dh3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.371828 /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod(21): Reading nostruct-align/2xat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13306/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod (nostruct-align/2xat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.473858 /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod(21): Reading nostruct-align/1lehA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod (nostruct-align/1lehA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.926861 /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21): Reading nostruct-align/1mil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod (nostruct-align/1mil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.772863 /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod(21): Reading nostruct-align/1cqyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod (nostruct-align/1cqyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.700838 /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod(21): Reading nostruct-align/1a0oD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod (nostruct-align/1a0oD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.474871 /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod(21): Reading nostruct-align/1tsg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21528/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod (nostruct-align/1tsg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.474840 /projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod(21): Reading nostruct-align/1tsk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7899/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod (nostruct-align/1tsk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.703873 /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod(21): Reading nostruct-align/1ejdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod (nostruct-align/1ejdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.476845 /projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod(21): Reading nostruct-align/8adh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-31469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod (nostruct-align/8adh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.873873 /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod(21): Reading nostruct-align/1tsm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28798/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod (nostruct-align/1tsm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.747866 /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod(22): Reading nostruct-align/1i6lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod (nostruct-align/1i6lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.299847 /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod(22): Reading nostruct-align/1dfuP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19917/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod (nostruct-align/1dfuP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.623873 /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod(21): Reading nostruct-align/1qhaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod (nostruct-align/1qhaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.809885 /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod(21): Reading nostruct-align/1tsp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod (nostruct-align/1tsp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.410875 /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod(22): Reading nostruct-align/1jetA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod (nostruct-align/1jetA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.512857 /projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod(21): Reading nostruct-align/1f3hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod (nostruct-align/1f3hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.006855 /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod(21): Reading nostruct-align/4crxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod (nostruct-align/4crxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.845863 /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod(21): Reading nostruct-align/1htrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod (nostruct-align/1htrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.114855 /projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod(21): Reading nostruct-align/1c0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-20111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod (nostruct-align/1c0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.018879 /projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod(22): Reading nostruct-align/1eqnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-20099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod (nostruct-align/1eqnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.449875 /projects/compbio/experiments/models.97/pdb/1i/1ir6A/nostruct-align/1ir6A.t2k-w0.5.mod(22): Reading nostruct-align/1ir6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-1733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ir6A/nostruct-align/1ir6A.t2k-w0.5.mod (nostruct-align/1ir6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ir6A/nostruct-align/1ir6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.137833 /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod(22): Reading nostruct-align/1oacA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod (nostruct-align/1oacA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.715845 /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod(21): Reading nostruct-align/1fmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-25282/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod (nostruct-align/1fmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.398880 /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod(21): Reading nostruct-align/1fmtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-22643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod (nostruct-align/1fmtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.335831 /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod(22): Reading nostruct-align/1v39.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod (nostruct-align/1v39.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.472879 /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod(21): Reading nostruct-align/1mjc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod (nostruct-align/1mjc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.754845 /projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod(22): Reading nostruct-align/1gk8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-14254/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod (nostruct-align/1gk8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.088875 /projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod(22): Reading nostruct-align/1c7nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod (nostruct-align/1c7nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.423870 /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k-w0.5.mod(22): Reading nostruct-align/1kicA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-16648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k-w0.5.mod (nostruct-align/1kicA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.547884 /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod(22): Reading nostruct-align/1g6xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod (nostruct-align/1g6xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.058834 /projects/compbio/experiments/models.97/pdb/1k/1k6aA/nostruct-align/1k6aA.t2k-w0.5.mod(22): Reading nostruct-align/1k6aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6aA/nostruct-align/1k6aA.t2k-w0.5.mod (nostruct-align/1k6aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6aA/nostruct-align/1k6aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.511843 /projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod(21): Reading nostruct-align/1ffk1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod (nostruct-align/1ffk1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.707846 /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod(22): Reading nostruct-align/1htrP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod (nostruct-align/1htrP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.290850 /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod(22): Reading nostruct-align/1jtgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod (nostruct-align/1jtgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.128838 /projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod(22): Reading nostruct-align/1gk8I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod (nostruct-align/1gk8I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.924875 /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod(22): Reading nostruct-align/1cs8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-28604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod (nostruct-align/1cs8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.554848 /projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod(21): Reading nostruct-align/1cqzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26956/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod (nostruct-align/1cqzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.466856 /projects/compbio/experiments/models.97/pdb/1k/1kpmA/nostruct-align/1kpmA.t2k-w0.5.mod(22): Reading nostruct-align/1kpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-1002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpmA/nostruct-align/1kpmA.t2k-w0.5.mod (nostruct-align/1kpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpmA/nostruct-align/1kpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.481882 /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod(21): Reading nostruct-align/1qb7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod (nostruct-align/1qb7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.425854 /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod(21): Reading nostruct-align/2u2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod (nostruct-align/2u2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.859882 /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod(22): Reading nostruct-align/256bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod (nostruct-align/256bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.208828 /projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod(22): Reading nostruct-align/1ejeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod (nostruct-align/1ejeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.731878 /projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod(21): Reading nostruct-align/1iioA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-16940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod (nostruct-align/1iioA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.323868 /projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod(21): Reading nostruct-align/1qhbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31064/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod (nostruct-align/1qhbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.440887 /projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod(21): Reading nostruct-align/1mhyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod (nostruct-align/1mhyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.445827 /projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod(22): Reading nostruct-align/1ffkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28918/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod (nostruct-align/1ffkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.390879 /projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod(22): Reading nostruct-align/1f3iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod (nostruct-align/1f3iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.952835 /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod(21): Reading nostruct-align/1mhyD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21964/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod (nostruct-align/1mhyD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.865837 /projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod(21): Reading nostruct-align/1ffkC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-25671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod (nostruct-align/1ffkC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.090883 /projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod(22): Reading nostruct-align/1ffkD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod (nostruct-align/1ffkD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.456873 /projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod(21): Reading nostruct-align/1ffkE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod (nostruct-align/1ffkE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.545851 /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod(21): Reading nostruct-align/3rp2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod (nostruct-align/3rp2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.760853 /projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod(21): Reading nostruct-align/1mhyG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod (nostruct-align/1mhyG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.211884 /projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod(21): Reading nostruct-align/1ffkF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod (nostruct-align/1ffkF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.254837 /projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod(22): Reading nostruct-align/1eqoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19490/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod (nostruct-align/1eqoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.891886 /projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod(21): Reading nostruct-align/1ffkG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod (nostruct-align/1ffkG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.500851 /projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod(21): Reading nostruct-align/1ffkI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod (nostruct-align/1ffkI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.539864 /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod(21): Reading nostruct-align/1bnkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14935/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod (nostruct-align/1bnkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.953846 /projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod(21): Reading nostruct-align/1fo3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod (nostruct-align/1fo3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.740877 /projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod(21): Reading nostruct-align/1ffkJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod (nostruct-align/1ffkJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.505861 /projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod(21): Reading nostruct-align/1ffkK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod (nostruct-align/1ffkK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.190832 /projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod(21): Reading nostruct-align/1ffkL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod (nostruct-align/1ffkL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.668829 /projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod(21): Reading nostruct-align/1ffkM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod (nostruct-align/1ffkM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.486876 /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod(22): Reading nostruct-align/1gk9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod (nostruct-align/1gk9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.598829 /projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod(21): Reading nostruct-align/1ffkN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod (nostruct-align/1ffkN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.004835 /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod(22): Reading nostruct-align/1ayoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod (nostruct-align/1ayoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.373840 /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod(22): Reading nostruct-align/1gk9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod (nostruct-align/1gk9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.003872 /projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod(21): Reading nostruct-align/1ffkO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5179/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod (nostruct-align/1ffkO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.886841 /projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod(21): Reading nostruct-align/1ffkP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod (nostruct-align/1ffkP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.268866 /projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod(21): Reading nostruct-align/1ffkQ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod (nostruct-align/1ffkQ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.818865 /projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod(21): Reading nostruct-align/1ffkR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod (nostruct-align/1ffkR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.690886 /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod(21): Reading nostruct-align/1faq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod (nostruct-align/1faq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.879850 /projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod(21): Reading nostruct-align/1ffkS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod (nostruct-align/1ffkS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.176840 /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod(21): Reading nostruct-align/1far.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod (nostruct-align/1far.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.880850 /projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod(21): Reading nostruct-align/1ffkT.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod (nostruct-align/1ffkT.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.252859 /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod(21): Reading nostruct-align/1fas.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod (nostruct-align/1fas.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.511839 /projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod(22): Reading nostruct-align/1jthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod (nostruct-align/1jthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.443838 /projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod(21): Reading nostruct-align/1ffkU.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod (nostruct-align/1ffkU.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.468870 /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod(21): Reading nostruct-align/1tuc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod (nostruct-align/1tuc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.108873 /projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod(22): Reading nostruct-align/1jthB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod (nostruct-align/1jthB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.923880 /projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod(21): Reading nostruct-align/1ffkV.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod (nostruct-align/1ffkV.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.917885 /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod(21): Reading nostruct-align/1yuiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-25047/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod (nostruct-align/1yuiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.327852 /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod(21): Reading nostruct-align/1tud.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod (nostruct-align/1tud.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.955879 /projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod(21): Reading nostruct-align/1ffkW.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod (nostruct-align/1ffkW.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.948854 /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod(22): Reading nostruct-align/1e19A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod (nostruct-align/1e19A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.736872 /projects/compbio/experiments/models.97/pdb/1j/1jthD/nostruct-align/1jthD.t2k-w0.5.mod(22): Reading nostruct-align/1jthD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jthD/nostruct-align/1jthD.t2k-w0.5.mod (nostruct-align/1jthD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jthD/nostruct-align/1jthD.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.678875 /projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod(21): Reading nostruct-align/1ffkX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod (nostruct-align/1ffkX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.390867 /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod(21): Reading nostruct-align/2bgu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod (nostruct-align/2bgu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.520838 /projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod(21): Reading nostruct-align/1mkp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-29813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod (nostruct-align/1mkp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.913864 /projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod(22): Reading nostruct-align/1ffkY.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod (nostruct-align/1ffkY.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.968882 /projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod(21): Reading nostruct-align/1ffkZ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod (nostruct-align/1ffkZ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.472857 /projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod(22): Reading nostruct-align/1ejfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1045/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod (nostruct-align/1ejfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.297832 /projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod(21): Reading nostruct-align/1a99A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod (nostruct-align/1a99A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.833876 /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod(22): Reading nostruct-align/3pviA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod (nostruct-align/3pviA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.618851 /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod(22): Reading nostruct-align/1tul.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14558/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod (nostruct-align/1tul.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.144854 /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod(21): Reading nostruct-align/1cydA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod (nostruct-align/1cydA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.987875 /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod(21): Reading nostruct-align/1tum.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod (nostruct-align/1tum.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.737858 /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod(21): Reading nostruct-align/1jevA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod (nostruct-align/1jevA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.452877 /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod(21): Reading nostruct-align/1dujA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1285/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod (nostruct-align/1dujA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.527851 /projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod(21): Reading nostruct-align/1httA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-31489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod (nostruct-align/1httA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.901869 /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod(22): Reading nostruct-align/1gd0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod (nostruct-align/1gd0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.477867 /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod(21): Reading nostruct-align/1tux.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-3811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod (nostruct-align/1tux.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.455830 /projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod(21): Reading nostruct-align/1fo4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23750/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod (nostruct-align/1fo4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.989872 /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod(22): Reading nostruct-align/1mla.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod (nostruct-align/1mla.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.204857 /projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod(21): Reading nostruct-align/1g6zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod (nostruct-align/1g6zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.887857 /projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod(22): Reading nostruct-align/1exzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod (nostruct-align/1exzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.443872 /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod(22): Reading nostruct-align/1d3vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod (nostruct-align/1d3vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.605860 /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod(21): Reading nostruct-align/1mli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod (nostruct-align/1mli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.033844 /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod(21): Reading nostruct-align/1fbr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod (nostruct-align/1fbr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.683865 /projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod(22): Reading nostruct-align/1l2iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod (nostruct-align/1l2iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.283871 /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod(21): Reading nostruct-align/1fd2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod (nostruct-align/1fd2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.692865 /projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod(21): Reading nostruct-align/1rdj1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod (nostruct-align/1rdj1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.369869 /projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod(22): Reading nostruct-align/1gqeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod (nostruct-align/1gqeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.098839 /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod(21): Reading nostruct-align/1mn1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod (nostruct-align/1mn1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.846872 /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod(22): Reading nostruct-align/1ejgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod (nostruct-align/1ejgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.905859 /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod(22): Reading nostruct-align/3mag.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod (nostruct-align/3mag.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.405870 /projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod(22): Reading nostruct-align/1qhdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod (nostruct-align/1qhdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.681833 /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod(21): Reading nostruct-align/1fca.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-27460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod (nostruct-align/1fca.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.299854 /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod(21): Reading nostruct-align/1b4aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod (nostruct-align/1b4aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.700874 /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod(21): Reading nostruct-align/3ladA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod (nostruct-align/3ladA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.464876 /projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod(22): Reading nostruct-align/1jg5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod (nostruct-align/1jg5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.070866 /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod(21): Reading nostruct-align/1tvs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-15982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod (nostruct-align/1tvs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.409887 /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod(21): Reading nostruct-align/1fce.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-3127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod (nostruct-align/1fce.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.057856 /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod(21): Reading nostruct-align/1tvt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod (nostruct-align/1tvt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.409887 /projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod(21): Reading nostruct-align/1trrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26952/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod (nostruct-align/1trrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.121857 /projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod(21): Reading nostruct-align/1fo5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-9275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod (nostruct-align/1fo5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.923845 /projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod(21): Reading nostruct-align/1mmc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod (nostruct-align/1mmc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.174858 /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod(22): Reading nostruct-align/1cl1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28262/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod (nostruct-align/1cl1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.089861 /projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod(21): Reading nostruct-align/1cjsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod (nostruct-align/1cjsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.202883 /projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod(21): Reading nostruct-align/1c7qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod (nostruct-align/1c7qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.051840 /projects/compbio/experiments/models.97/pdb/1k/1k6dA/nostruct-align/1k6dA.t2k-w0.5.mod(22): Reading nostruct-align/1k6dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6dA/nostruct-align/1k6dA.t2k-w0.5.mod (nostruct-align/1k6dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6dA/nostruct-align/1k6dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.384840 /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod(22): Reading nostruct-align/1gd1O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod (nostruct-align/1gd1O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.997871 /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod(21): Reading nostruct-align/1fct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod (nostruct-align/1fct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.765854 /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod(22): Reading nostruct-align/1mml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod (nostruct-align/1mml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.058855 /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod(21): Reading nostruct-align/1p32A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod (nostruct-align/1p32A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.427876 /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod(22): Reading nostruct-align/1nstA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25494/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod (nostruct-align/1nstA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.947828 /projects/compbio/experiments/models.97/pdb/1k/1kppA/nostruct-align/1kppA.t2k-w0.5.mod(22): Reading nostruct-align/1kppA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-4406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kppA/nostruct-align/1kppA.t2k-w0.5.mod (nostruct-align/1kppA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kppA/nostruct-align/1kppA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.750881 /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod(21): Reading nostruct-align/1p32C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod (nostruct-align/1p32C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.261887 /projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod(21): Reading nostruct-align/1mmq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-23720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod (nostruct-align/1mmq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.518885 /projects/compbio/experiments/models.97/pdb/1l/1ln4A/nostruct-align/1ln4A.t2k-w0.5.mod(22): Reading nostruct-align/1ln4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4550/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ln4A/nostruct-align/1ln4A.t2k-w0.5.mod (nostruct-align/1ln4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ln4A/nostruct-align/1ln4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.688860 /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod(21): Reading nostruct-align/1ejhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod (nostruct-align/1ejhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.972836 /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod(21): Reading nostruct-align/1tkiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod (nostruct-align/1tkiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.945841 /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod(22): Reading nostruct-align/1iirA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-26310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod (nostruct-align/1iirA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.642828 /projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod(21): Reading nostruct-align/1i6pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod (nostruct-align/1i6pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.705872 /projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod(21): Reading nostruct-align/1b4bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-30945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod (nostruct-align/1b4bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.432859 /projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod(21): Reading nostruct-align/1f3lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6325/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod (nostruct-align/1f3lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.537863 /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod(22): Reading nostruct-align/1dulA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod (nostruct-align/1dulA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.189882 /projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod(21): Reading nostruct-align/1a0sP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod (nostruct-align/1a0sP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.114853 /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod(21): Reading nostruct-align/1fdd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod (nostruct-align/1fdd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.753857 /projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod(21): Reading nostruct-align/1g10A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod (nostruct-align/1g10A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.108885 /projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod(22): Reading nostruct-align/1gd2E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod (nostruct-align/1gd2E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.633860 /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod(22): Reading nostruct-align/1fdi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-31391/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod (nostruct-align/1fdi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.689878 /projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod(21): Reading nostruct-align/1gd2G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod (nostruct-align/1gd2G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.380859 /projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod(22): Reading nostruct-align/1jmaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod (nostruct-align/1jmaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.826887 /projects/compbio/experiments/models.97/pdb/1c/1cjtA/nostruct-align/1cjtA.t2k-w0.5.mod(22): Reading nostruct-align/1cjtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjtA/nostruct-align/1cjtA.t2k-w0.5.mod (nostruct-align/1cjtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjtA/nostruct-align/1cjtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.236835 /projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod(21): Reading nostruct-align/1gd2I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13792/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod (nostruct-align/1gd2I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.755844 /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod(21): Reading nostruct-align/1cl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27794/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod (nostruct-align/1cl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.082876 /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod(21): Reading nostruct-align/1mnd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-22683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod (nostruct-align/1mnd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.750832 /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod(21): Reading nostruct-align/1fdm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod (nostruct-align/1fdm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.769838 /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod(22): Reading nostruct-align/1fdo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod (nostruct-align/1fdo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.727877 /projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod(21): Reading nostruct-align/1xyfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod (nostruct-align/1xyfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.306847 /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod(21): Reading nostruct-align/1fdr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod (nostruct-align/1fdr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.246836 /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod(21): Reading nostruct-align/1bw6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod (nostruct-align/1bw6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.818872 /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod(21): Reading nostruct-align/1fds.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-26035/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod (nostruct-align/1fds.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.995848 /projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod(22): Reading nostruct-align/1jtkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3272/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod (nostruct-align/1jtkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.477867 /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod(21): Reading nostruct-align/2itg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod (nostruct-align/2itg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.215874 /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod(21): Reading nostruct-align/1txb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod (nostruct-align/1txb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.519886 /projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod(21): Reading nostruct-align/1fdt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5832/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod (nostruct-align/1fdt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.163858 /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod(21): Reading nostruct-align/1kigI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-9695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod (nostruct-align/1kigI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.174889 /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod(21): Reading nostruct-align/1kigL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-24468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod (nostruct-align/1kigL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.807867 /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod(21): Reading nostruct-align/1txm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod (nostruct-align/1txm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.584831 /projects/compbio/experiments/models.97/pdb/1g/1gxqA/nostruct-align/1gxqA.t2k-w0.5.mod(22): Reading nostruct-align/1gxqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gxqA/nostruct-align/1gxqA.t2k-w0.5.mod (nostruct-align/1gxqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gxqA/nostruct-align/1gxqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.421858 /projects/compbio/experiments/models.97/pdb/1k/1ky9A/nostruct-align/1ky9A.t2k-w0.5.mod(22): Reading nostruct-align/1ky9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ky9A/nostruct-align/1ky9A.t2k-w0.5.mod (nostruct-align/1ky9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ky9A/nostruct-align/1ky9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.637871 /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod(21): Reading nostruct-align/1qhfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod (nostruct-align/1qhfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.112850 /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod(21): Reading nostruct-align/1bgeB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-6794/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod (nostruct-align/1bgeB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.227877 /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod(21): Reading nostruct-align/1b4cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-4766/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod (nostruct-align/1b4cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.905855 /projects/compbio/experiments/models.97/pdb/1k/1ky9B/nostruct-align/1ky9B.t2k-w0.5.mod(22): Reading nostruct-align/1ky9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ky9B/nostruct-align/1ky9B.t2k-w0.5.mod (nostruct-align/1ky9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ky9B/nostruct-align/1ky9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.999844 /projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod(22): Reading nostruct-align/1jeyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod (nostruct-align/1jeyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.069839 /projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod(22): Reading nostruct-align/1f3mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod (nostruct-align/1f3mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.058876 /projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod(22): Reading nostruct-align/1jeyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod (nostruct-align/1jeyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.009859 /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod(21): Reading nostruct-align/1a0tP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod (nostruct-align/1a0tP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.882870 /projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod(21): Reading nostruct-align/1f3mC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod (nostruct-align/1f3mC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.435871 /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod(22): Reading nostruct-align/1qopA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod (nostruct-align/1qopA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.897871 /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod(22): Reading nostruct-align/1qopB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod (nostruct-align/1qopB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.846882 /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod(21): Reading nostruct-align/1c7sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod (nostruct-align/1c7sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.450888 /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod(22): Reading nostruct-align/1mof.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3672/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod (nostruct-align/1mof.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.019855 /projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod(22): Reading nostruct-align/1k6fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod (nostruct-align/1k6fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.784876 /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod(22): Reading nostruct-align/1mwpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod (nostruct-align/1mwpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.521866 /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod(22): Reading nostruct-align/1d3yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod (nostruct-align/1d3yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.938854 /projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod(21): Reading nostruct-align/1lenB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-23414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod (nostruct-align/1lenB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.307835 /projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod(21): Reading nostruct-align/9insB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-17158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod (nostruct-align/9insB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.074875 /projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod(21): Reading nostruct-align/1ibjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod (nostruct-align/1ibjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.806879 /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod(22): Reading nostruct-align/1moq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17946/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod (nostruct-align/1moq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.069830 /projects/compbio/experiments/models.97/pdb/1l/1l9vA/nostruct-align/1l9vA.t2k-w0.5.mod(22): Reading nostruct-align/1l9vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9vA/nostruct-align/1l9vA.t2k-w0.5.mod (nostruct-align/1l9vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l9vA/nostruct-align/1l9vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.362877 /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21): Reading nostruct-align/1ejjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod (nostruct-align/1ejjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.005831 /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k-w0.5.mod(22): Reading nostruct-align/1gxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k-w0.5.mod (nostruct-align/1gxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.419828 /projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod(22): Reading nostruct-align/1jg8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod (nostruct-align/1jg8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.151833 /projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod(22): Reading nostruct-align/7ceiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31633/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod (nostruct-align/7ceiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.430859 /projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod(21): Reading nostruct-align/5lyz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod (nostruct-align/5lyz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.384842 /projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod(21): Reading nostruct-align/1necA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-1336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod (nostruct-align/1necA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.510887 /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod(22): Reading nostruct-align/1tys.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod (nostruct-align/1tys.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.454874 /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod(21): Reading nostruct-align/1g12A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod (nostruct-align/1g12A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.810881 /projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod(21): Reading nostruct-align/1tyu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod (nostruct-align/1tyu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.409861 /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod(22): Reading nostruct-align/1ltaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-17224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod (nostruct-align/1ltaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.714880 /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod(22): Reading nostruct-align/1tyv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod (nostruct-align/1tyv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.404865 /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod(22): Reading nostruct-align/1mpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod (nostruct-align/1mpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.642887 /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod(22): Reading nostruct-align/1fo8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2202/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod (nostruct-align/1fo8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.633827 /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod(21): Reading nostruct-align/1mpb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7287/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod (nostruct-align/1mpb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.511847 /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod(22): Reading nostruct-align/1jmcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod (nostruct-align/1jmcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.638832 /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod(21): Reading nostruct-align/1cl4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25741/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod (nostruct-align/1cl4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.675877 /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod(21): Reading nostruct-align/1bw8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod (nostruct-align/1bw8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.336840 /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod(22): Reading nostruct-align/1p35A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod (nostruct-align/1p35A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387840 /projects/compbio/experiments/models.97/pdb/3f/3fisA/nostruct-align/3fisA.t2k-w0.5.mod(22): Reading nostruct-align/3fisA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-30791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fisA/nostruct-align/3fisA.t2k-w0.5.mod (nostruct-align/3fisA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3f/3fisA/nostruct-align/3fisA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.495852 /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod(21): Reading nostruct-align/1mpp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2859/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod (nostruct-align/1mpp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.779865 /projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod(22): Reading nostruct-align/1kpsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod (nostruct-align/1kpsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.263889 /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod(22): Reading nostruct-align/1hfeL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod (nostruct-align/1hfeL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.142849 /projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod(22): Reading nostruct-align/1i81A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod (nostruct-align/1i81A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.400845 /projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod(22): Reading nostruct-align/1qhhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod (nostruct-align/1qhhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.026848 /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod(21): Reading nostruct-align/1b4eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod (nostruct-align/1b4eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.616850 /projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod(22): Reading nostruct-align/1qhhC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4285/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod (nostruct-align/1qhhC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.559874 /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod(22): Reading nostruct-align/1hfeS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod (nostruct-align/1hfeS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.382866 /projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod(22): Reading nostruct-align/1qhhD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod (nostruct-align/1qhhD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.789881 /projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod(22): Reading nostruct-align/1htyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod (nostruct-align/1htyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.186865 /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod(21): Reading nostruct-align/2chsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod (nostruct-align/2chsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.444872 /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod(22): Reading nostruct-align/1svpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod (nostruct-align/1svpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.972864 /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod(21): Reading nostruct-align/1nedA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26306/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod (nostruct-align/1nedA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.050884 /projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod(21): Reading nostruct-align/1gd5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod (nostruct-align/1gd5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.985836 /projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod(22): Reading nostruct-align/1g13A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13895/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod (nostruct-align/1g13A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.049868 /projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod(21): Reading nostruct-align/1fge.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod (nostruct-align/1fge.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.117844 /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod(22): Reading nostruct-align/4uagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22384/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod (nostruct-align/4uagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.869883 /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod(21): Reading nostruct-align/1qorA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-10164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod (nostruct-align/1qorA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.967880 /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod(21): Reading nostruct-align/1cjwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod (nostruct-align/1cjwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.763882 /projects/compbio/experiments/models.97/pdb/1k/1kijA/nostruct-align/1kijA.t2k-w0.5.mod(22): Reading nostruct-align/1kijA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-30250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kijA/nostruct-align/1kijA.t2k-w0.5.mod (nostruct-align/1kijA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kijA/nostruct-align/1kijA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.499838 /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod(21): Reading nostruct-align/2xis.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-4957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod (nostruct-align/2xis.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.807873 /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod(21): Reading nostruct-align/1bw9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-31085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod (nostruct-align/1bw9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.530878 /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod(21): Reading nostruct-align/1lepA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod (nostruct-align/1lepA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.261881 /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod(21): Reading nostruct-align/1fgs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod (nostruct-align/1fgs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.635885 /projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod(22): Reading nostruct-align/1rdo1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4795/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod (nostruct-align/1rdo1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.327873 /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod(22): Reading nostruct-align/1kptA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod (nostruct-align/1kptA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.871847 /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod(22): Reading nostruct-align/1vrkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod (nostruct-align/1vrkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.071857 /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod(21): Reading nostruct-align/1hmpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod (nostruct-align/1hmpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.290850 /projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod(22): Reading nostruct-align/2hrvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod (nostruct-align/2hrvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.384829 /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k-w0.5.mod(22): Reading nostruct-align/1l9xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8246/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k-w0.5.mod (nostruct-align/1l9xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.943884 /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod(22): Reading nostruct-align/2tpsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod (nostruct-align/2tpsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.693830 /projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod(21): Reading nostruct-align/1i82A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-25715/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod (nostruct-align/1i82A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.218864 /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod(21): Reading nostruct-align/1qhiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod (nostruct-align/1qhiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.501884 /projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod(21): Reading nostruct-align/1fh0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod (nostruct-align/1fh0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.339857 /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod(22): Reading nostruct-align/1b4fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod (nostruct-align/1b4fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.788870 /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod(21): Reading nostruct-align/1fha.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-28426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod (nostruct-align/1fha.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.067879 /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod(21): Reading nostruct-align/1dupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9447/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod (nostruct-align/1dupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.396851 /projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod(22): Reading nostruct-align/1hv8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod (nostruct-align/1hv8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.341839 /projects/compbio/experiments/models.97/pdb/1e/1es4A/nostruct-align/1es4A.t2k-w0.5.mod(22): Reading nostruct-align/1es4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es4A/nostruct-align/1es4A.t2k-w0.5.mod (nostruct-align/1es4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1es4A/nostruct-align/1es4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.057844 /projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod(21): Reading nostruct-align/1kbaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29272/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod (nostruct-align/1kbaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.455845 /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod(21): Reading nostruct-align/1b4fG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-21350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod (nostruct-align/1b4fG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.888876 /projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod(21): Reading nostruct-align/1oakA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod (nostruct-align/1oakA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.243837 /projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod(22): Reading nostruct-align/1qq1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod (nostruct-align/1qq1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.813829 /projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod(22): Reading nostruct-align/1jmeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod (nostruct-align/1jmeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.486874 /projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod(21): Reading nostruct-align/2bnh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod (nostruct-align/2bnh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.024870 /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod(22): Reading nostruct-align/1cjxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod (nostruct-align/1cjxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.096844 /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod(22): Reading nostruct-align/1c94A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23051/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod (nostruct-align/1c94A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.475845 /projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod(21): Reading nostruct-align/1mrg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod (nostruct-align/1mrg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.116863 /projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod(22): Reading nostruct-align/1k6iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod (nostruct-align/1k6iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.644888 /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod(22): Reading nostruct-align/1mrj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13494/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod (nostruct-align/1mrj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.107841 /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod(21): Reading nostruct-align/1fht.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod (nostruct-align/1fht.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.761887 /projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod(21): Reading nostruct-align/1nsyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod (nostruct-align/1nsyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.743864 /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod(21): Reading nostruct-align/4tsvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-1487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod (nostruct-align/4tsvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.812828 /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod(21): Reading nostruct-align/1e0aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-1704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod (nostruct-align/1e0aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.478874 /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod(22): Reading nostruct-align/1mrp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod (nostruct-align/1mrp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.477879 /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod(21): Reading nostruct-align/1mrt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod (nostruct-align/1mrt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.390860 /projects/compbio/experiments/models.97/pdb/1i/1iiwA/nostruct-align/1iiwA.t2k-w0.5.mod(22): Reading nostruct-align/1iiwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20035/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iiwA/nostruct-align/1iiwA.t2k-w0.5.mod (nostruct-align/1iiwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iiwA/nostruct-align/1iiwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.406883 /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod(22): Reading nostruct-align/4bcl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod (nostruct-align/4bcl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.037834 /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod(21): Reading nostruct-align/7atjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod (nostruct-align/7atjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.996866 /projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod(21): Reading nostruct-align/1fib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod (nostruct-align/1fib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.773848 /projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod(21): Reading nostruct-align/1hv9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-29566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod (nostruct-align/1hv9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.942842 /projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod(21): Reading nostruct-align/1gd7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-21679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod (nostruct-align/1gd7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.750837 /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod(22): Reading nostruct-align/1es5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod (nostruct-align/1es5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.525866 /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod(22): Reading nostruct-align/2hddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod (nostruct-align/2hddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.671839 /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod(21): Reading nostruct-align/1qq2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4166/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod (nostruct-align/1qq2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.281855 /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod(22): Reading nostruct-align/1msc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod (nostruct-align/1msc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.013844 /projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod(21): Reading nostruct-align/1fil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod (nostruct-align/1fil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.693872 /projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod(22): Reading nostruct-align/1kilD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod (nostruct-align/1kilD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.195831 /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod(21): Reading nostruct-align/1msi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod (nostruct-align/1msi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.714867 /projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod(22): Reading nostruct-align/1kilE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod (nostruct-align/1kilE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.244844 /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod(22): Reading nostruct-align/1ae9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod (nostruct-align/1ae9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.006876 /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod(22): Reading nostruct-align/1msk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod (nostruct-align/1msk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.506853 /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod(22): Reading nostruct-align/1fit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod (nostruct-align/1fit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.417885 /projects/compbio/experiments/models.97/pdb/1l/1l2pA/nostruct-align/1l2pA.t2k-w0.5.mod(22): Reading nostruct-align/1l2pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-15854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2pA/nostruct-align/1l2pA.t2k-w0.5.mod (nostruct-align/1l2pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l2pA/nostruct-align/1l2pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.171862 /projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod(22): Reading nostruct-align/1cl7I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod (nostruct-align/1cl7I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.751884 /projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod(22): Reading nostruct-align/1e0bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod (nostruct-align/1e0bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.815834 /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod(22): Reading nostruct-align/1fiy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod (nostruct-align/1fiy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.336863 /projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod(21): Reading nostruct-align/2wsyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod (nostruct-align/2wsyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.055887 /projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod(21): Reading nostruct-align/2wsyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19599/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod (nostruct-align/2wsyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.698866 /projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod(22): Reading nostruct-align/1ik6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod (nostruct-align/1ik6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.323870 /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod(22): Reading nostruct-align/1e7lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod (nostruct-align/1e7lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.849854 /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod(21): Reading nostruct-align/1qhkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod (nostruct-align/1qhkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.462839 /projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod(22): Reading nostruct-align/1dw0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod (nostruct-align/1dw0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.833839 /projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod(21): Reading nostruct-align/1fftC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27285/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod (nostruct-align/1fftC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.572845 /projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod(21): Reading nostruct-align/1f3rB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-14405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod (nostruct-align/1f3rB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.842840 /projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod(22): Reading nostruct-align/1gd8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod (nostruct-align/1gd8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.139839 /projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod(21): Reading nostruct-align/1c0nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod (nostruct-align/1c0nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.592852 /projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod(21): Reading nostruct-align/1es6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod (nostruct-align/1es6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.951880 /projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod(22): Reading nostruct-align/1iqaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod (nostruct-align/1iqaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.793869 /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod(21): Reading nostruct-align/1qouA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-12233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod (nostruct-align/1qouA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.281851 /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod(22): Reading nostruct-align/1cl8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod (nostruct-align/1cl8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.544880 /projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod(22): Reading nostruct-align/1c96A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod (nostruct-align/1c96A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.506849 /projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod(21): Reading nostruct-align/1kimA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod (nostruct-align/1kimA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.450830 /projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod(22): Reading nostruct-align/1g7aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24308/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod (nostruct-align/1g7aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.800831 /projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod(22): Reading nostruct-align/1g7aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod (nostruct-align/1g7aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.172850 /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod(21): Reading nostruct-align/1wgjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod (nostruct-align/1wgjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.173832 /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod(21): Reading nostruct-align/1eceA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-30169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod (nostruct-align/1eceA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.311853 /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod(21): Reading nostruct-align/1a28A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod (nostruct-align/1a28A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.060839 /projects/compbio/experiments/models.97/pdb/1l/1l2qA/nostruct-align/1l2qA.t2k-w0.5.mod(22): Reading nostruct-align/1l2qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2qA/nostruct-align/1l2qA.t2k-w0.5.mod (nostruct-align/1l2qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l2qA/nostruct-align/1l2qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.489845 /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod(22): Reading nostruct-align/1e0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-398/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod (nostruct-align/1e0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.630848 /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod(22): Reading nostruct-align/1t1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod (nostruct-align/1t1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.288879 /projects/compbio/experiments/models.97/pdb/1k/1kr5A/nostruct-align/1kr5A.t2k-w0.5.mod(22): Reading nostruct-align/1kr5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-4192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kr5A/nostruct-align/1kr5A.t2k-w0.5.mod (nostruct-align/1kr5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kr5A/nostruct-align/1kr5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.790861 /projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod(22): Reading nostruct-align/1ho1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod (nostruct-align/1ho1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.703842 /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod(21): Reading nostruct-align/1akeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-12497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod (nostruct-align/1akeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.567863 /projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod(21): Reading nostruct-align/1plfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-24098/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod (nostruct-align/1plfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.868860 /projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod(21): Reading nostruct-align/1i85A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod (nostruct-align/1i85A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.061853 /projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod(22): Reading nostruct-align/1i6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21283/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod (nostruct-align/1i6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.892830 /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod(22): Reading nostruct-align/1qhlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod (nostruct-align/1qhlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.425880 /projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod(21): Reading nostruct-align/1mtx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod (nostruct-align/1mtx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.750854 /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod(22): Reading nostruct-align/1dusA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26342/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod (nostruct-align/1dusA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.525829 /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod(21): Reading nostruct-align/1fkd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod (nostruct-align/1fkd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.734844 /projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod(21): Reading nostruct-align/1fkf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-16489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod (nostruct-align/1fkf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.734844 /projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod(22): Reading nostruct-align/1es7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27952/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod (nostruct-align/1es7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.383879 /projects/compbio/experiments/models.97/pdb/1i/1iqbB/nostruct-align/1iqbB.t2k-w0.5.mod(22): Reading nostruct-align/1iqbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqbB/nostruct-align/1iqbB.t2k-w0.5.mod (nostruct-align/1iqbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqbB/nostruct-align/1iqbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.566862 /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod(21): Reading nostruct-align/1bp3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod (nostruct-align/1bp3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.789839 /projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod(21): Reading nostruct-align/1bp3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24967/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod (nostruct-align/1bp3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.650862 /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod(21): Reading nostruct-align/1qq4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod (nostruct-align/1qq4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.753839 /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod(21): Reading nostruct-align/1fkj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod (nostruct-align/1fkj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.796846 /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod(21): Reading nostruct-align/1ayyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-14589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod (nostruct-align/1ayyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.173847 /projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod(22): Reading nostruct-align/1eybA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod (nostruct-align/1eybA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.105846 /projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod(21): Reading nostruct-align/5er2E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-463/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod (nostruct-align/5er2E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.127853 /projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod(21): Reading nostruct-align/1qovH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12311/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod (nostruct-align/1qovH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.195829 /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod(21): Reading nostruct-align/1shaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod (nostruct-align/1shaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.835835 /projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod(21): Reading nostruct-align/1aroP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod (nostruct-align/1aroP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.050833 /projects/compbio/experiments/models.97/pdb/1l/1l2rA/nostruct-align/1l2rA.t2k-w0.5.mod(22): Reading nostruct-align/1l2rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13580/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2rA/nostruct-align/1l2rA.t2k-w0.5.mod (nostruct-align/1l2rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l2rA/nostruct-align/1l2rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.489845 /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod(21): Reading nostruct-align/1ecfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod (nostruct-align/1ecfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.479828 /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod(21): Reading nostruct-align/3tss.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-26435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod (nostruct-align/3tss.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.128855 /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod(21): Reading nostruct-align/1ecfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod (nostruct-align/1ecfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.224829 /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod(22): Reading nostruct-align/1mun.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod (nostruct-align/1mun.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.701838 /projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod(21): Reading nostruct-align/1opaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod (nostruct-align/1opaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.706833 /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod(21): Reading nostruct-align/1mup.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod (nostruct-align/1mup.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.509861 /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod(21): Reading nostruct-align/1mut.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod (nostruct-align/1mut.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.797869 /projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod(22): Reading nostruct-align/1i86A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod (nostruct-align/1i86A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.930838 /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod(21): Reading nostruct-align/1bglA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28087/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod (nostruct-align/1bglA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.377869 /projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod(22): Reading nostruct-align/1f52A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod (nostruct-align/1f52A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.568876 /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod(22): Reading nostruct-align/1ce0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3449/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod (nostruct-align/1ce0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.197861 /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod(22): Reading nostruct-align/1c0pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod (nostruct-align/1c0pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.601881 /projects/compbio/experiments/models.97/pdb/1k/1kbeA/nostruct-align/1kbeA.t2k-w0.5.mod(22): Reading nostruct-align/1kbeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbeA/nostruct-align/1kbeA.t2k-w0.5.mod (nostruct-align/1kbeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbeA/nostruct-align/1kbeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.924864 /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod(22): Reading nostruct-align/1iqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod (nostruct-align/1iqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.190880 /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod(22): Reading nostruct-align/1qq5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod (nostruct-align/1qq5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.058870 /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod(21): Reading nostruct-align/1flp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod (nostruct-align/1flp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.382870 /projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod(21): Reading nostruct-align/1dgaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod (nostruct-align/1dgaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.832834 /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod(22): Reading nostruct-align/1ixmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod (nostruct-align/1ixmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.643862 /projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod(21): Reading nostruct-align/1shbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod (nostruct-align/1shbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.840853 /projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod(21): Reading nostruct-align/1mvi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod (nostruct-align/1mvi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.413834 /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod(21): Reading nostruct-align/1ixmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod (nostruct-align/1ixmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.648853 /projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod(21): Reading nostruct-align/1mvj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod (nostruct-align/1mvj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.440842 /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod(21): Reading nostruct-align/1fuiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod (nostruct-align/1fuiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.596848 /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k-w0.5.mod(22): Reading nostruct-align/1kr7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-26753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k-w0.5.mod (nostruct-align/1kr7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.865866 /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod(22): Reading nostruct-align/1qadA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod (nostruct-align/1qadA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.684841 /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod(21): Reading nostruct-align/1opbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod (nostruct-align/1opbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.718851 /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod(22): Reading nostruct-align/2brz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod (nostruct-align/2brz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.496832 /projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod(22): Reading nostruct-align/1ik9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod (nostruct-align/1ik9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.456831 /projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod(21): Reading nostruct-align/2blsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod (nostruct-align/2blsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.975832 /projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod(22): Reading nostruct-align/1ik9C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7034/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod (nostruct-align/1ik9C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.309856 /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod(21): Reading nostruct-align/1b4kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24920/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod (nostruct-align/1b4kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.367830 /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod(21): Reading nostruct-align/1fmb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-6145/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod (nostruct-align/1fmb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.951866 /projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod(21): Reading nostruct-align/1f53A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod (nostruct-align/1f53A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.465870 /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod(22): Reading nostruct-align/1f3uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod (nostruct-align/1f3uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.166861 /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod(22): Reading nostruct-align/1f3uB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod (nostruct-align/1f3uB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.378830 /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod(22): Reading nostruct-align/1psrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod (nostruct-align/1psrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.843828 /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod(22): Reading nostruct-align/1es9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod (nostruct-align/1es9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.206839 /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod(22): Reading nostruct-align/2hdhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod (nostruct-align/2hdhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.444838 /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod(22): Reading nostruct-align/1fmk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod (nostruct-align/1fmk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.500872 /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod(21): Reading nostruct-align/2utgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13325/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod (nostruct-align/2utgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.207884 /projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod(21): Reading nostruct-align/1g7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15752/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod (nostruct-align/1g7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.665852 /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod(21): Reading nostruct-align/1shcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-19364/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod (nostruct-align/1shcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.908834 /projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod(21): Reading nostruct-align/1jv2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-20894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod (nostruct-align/1jv2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.698839 /projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod(21): Reading nostruct-align/1jv2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod (nostruct-align/1jv2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -31.456827 /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod(22): Reading nostruct-align/1id0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod (nostruct-align/1id0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.473829 /projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod(22): Reading nostruct-align/1gqpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod (nostruct-align/1gqpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.901869 /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod(21): Reading nostruct-align/1qoxN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-31480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod (nostruct-align/1qoxN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.902887 /projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod(22): Reading nostruct-align/1ibrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod (nostruct-align/1ibrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.579855 /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod(21): Reading nostruct-align/1qaeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod (nostruct-align/1qaeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.190836 /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod(22): Reading nostruct-align/1dnlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod (nostruct-align/1dnlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.071867 /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod(21): Reading nostruct-align/1akhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-7081/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod (nostruct-align/1akhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.657839 /projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod(21): Reading nostruct-align/1e0fI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod (nostruct-align/1e0fI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.813852 /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod(21): Reading nostruct-align/1akhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod (nostruct-align/1akhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.946877 /projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod(21): Reading nostruct-align/1ejrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod (nostruct-align/1ejrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.126850 /projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod(22): Reading nostruct-align/1ejrC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25858/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod (nostruct-align/1ejrC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.200882 /projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod(21): Reading nostruct-align/2bn2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod (nostruct-align/2bn2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.063850 /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod(21): Reading nostruct-align/2bltA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-4107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod (nostruct-align/2bltA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.299837 /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod(22): Reading nostruct-align/1i88A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod (nostruct-align/1i88A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.027847 /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod(21): Reading nostruct-align/1qhoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod (nostruct-align/1qhoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.858854 /projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod(21): Reading nostruct-align/1fh6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-10032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod (nostruct-align/1fh6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.831831 /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod(22): Reading nostruct-align/1fna.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod (nostruct-align/1fna.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.883846 /projects/compbio/experiments/models.97/pdb/1j/1jfaA/nostruct-align/1jfaA.t2k-w0.5.mod(22): Reading nostruct-align/1jfaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfaA/nostruct-align/1jfaA.t2k-w0.5.mod (nostruct-align/1jfaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfaA/nostruct-align/1jfaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.326834 /projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod(22): Reading nostruct-align/1f3vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod (nostruct-align/1f3vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.769842 /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod(22): Reading nostruct-align/1fnc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod (nostruct-align/1fnc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.057856 /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod(21): Reading nostruct-align/1fnd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod (nostruct-align/1fnd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.854885 /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod(21): Reading nostruct-align/1c20A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod (nostruct-align/1c20A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.884853 /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod(21): Reading nostruct-align/1fnf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-12989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod (nostruct-align/1fnf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.825842 /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod(22): Reading nostruct-align/1duvG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25907/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod (nostruct-align/1duvG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.676888 /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod(21): Reading nostruct-align/1bnxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod (nostruct-align/1bnxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.378857 /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod(22): Reading nostruct-align/1qq7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod (nostruct-align/1qq7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.892878 /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod(22): Reading nostruct-align/1qoyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod (nostruct-align/1qoyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.229841 /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod(21): Reading nostruct-align/1mxa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-16805/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod (nostruct-align/1mxa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.246857 /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod(21): Reading nostruct-align/1mxb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod (nostruct-align/1mxb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.727879 /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod(22): Reading nostruct-align/1jmkC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod (nostruct-align/1jmkC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.258871 /projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod(21): Reading nostruct-align/1g7eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod (nostruct-align/1g7eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.271883 /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod(22): Reading nostruct-align/1eyeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod (nostruct-align/1eyeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.686888 /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod(21): Reading nostruct-align/1xypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-19031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod (nostruct-align/1xypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.666885 /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod(21): Reading nostruct-align/1shdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-25916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod (nostruct-align/1shdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.694864 /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod(22): Reading nostruct-align/1d4aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod (nostruct-align/1d4aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.480871 /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod(22): Reading nostruct-align/6paxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod (nostruct-align/6paxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.621885 /projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod(21): Reading nostruct-align/1fukA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod (nostruct-align/1fukA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.611877 /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod(21): Reading nostruct-align/1eciA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26066/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod (nostruct-align/1eciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.625883 /projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod(22): Reading nostruct-align/1id1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15949/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod (nostruct-align/1id1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.613878 /projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod(21): Reading nostruct-align/1eciB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-6119/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod (nostruct-align/1eciB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.621847 /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod(21): Reading nostruct-align/1uae.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11601/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod (nostruct-align/1uae.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.158833 /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod(22): Reading nostruct-align/1uag.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod (nostruct-align/1uag.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.525848 /projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod(21): Reading nostruct-align/1ffyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-15109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod (nostruct-align/1ffyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.220869 /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod(22): Reading nostruct-align/1jfbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod (nostruct-align/1jfbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.353832 /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod(21): Reading nostruct-align/1ce3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod (nostruct-align/1ce3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.410875 /projects/compbio/experiments/models.97/pdb/1a/1at1A/nostruct-align/1at1A.t2k-w0.5.mod(22): Reading nostruct-align/1at1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1at1A/nostruct-align/1at1A.t2k-w0.5.mod (nostruct-align/1at1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1at1A/nostruct-align/1at1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.321875 /projects/compbio/experiments/models.97/pdb/1k/1kbhA/nostruct-align/1kbhA.t2k-w0.5.mod(22): Reading nostruct-align/1kbhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbhA/nostruct-align/1kbhA.t2k-w0.5.mod (nostruct-align/1kbhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbhA/nostruct-align/1kbhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.079853 /projects/compbio/experiments/models.97/pdb/1k/1kbhB/nostruct-align/1kbhB.t2k-w0.5.mod(22): Reading nostruct-align/1kbhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbhB/nostruct-align/1kbhB.t2k-w0.5.mod (nostruct-align/1kbhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbhB/nostruct-align/1kbhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.470856 /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod(21): Reading nostruct-align/1bp7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod (nostruct-align/1bp7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.151855 /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod(22): Reading nostruct-align/1qq8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod (nostruct-align/1qq8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.731844 /projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod(22): Reading nostruct-align/1g7fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-29369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod (nostruct-align/1g7fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.451830 /projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod(21): Reading nostruct-align/9apiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18977/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod (nostruct-align/9apiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.037865 /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod(21): Reading nostruct-align/1d4bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-24882/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod (nostruct-align/1d4bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.250881 /projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod(21): Reading nostruct-align/9apiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-13019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod (nostruct-align/9apiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.050856 /projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod(22): Reading nostruct-align/1jv4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod (nostruct-align/1jv4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.468853 /projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod(21): Reading nostruct-align/1myn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod (nostruct-align/1myn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.372877 /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod(22): Reading nostruct-align/1qagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod (nostruct-align/1qagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.064854 /projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod(21): Reading nostruct-align/1myo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod (nostruct-align/1myo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.403849 /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod(21): Reading nostruct-align/1ubi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod (nostruct-align/1ubi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.550844 /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod(21): Reading nostruct-align/1myt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-2495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod (nostruct-align/1myt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.445854 /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod(21): Reading nostruct-align/1qhqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod (nostruct-align/1qhqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.238874 /projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod(21): Reading nostruct-align/1ubq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod (nostruct-align/1ubq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.446869 /projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod(21): Reading nostruct-align/1f56A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-7205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod (nostruct-align/1f56A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.787886 /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod(21): Reading nostruct-align/1ce4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod (nostruct-align/1ce4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.255840 /projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod(22): Reading nostruct-align/1ccvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod (nostruct-align/1ccvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.454853 /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod(21): Reading nostruct-align/7taa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-2986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod (nostruct-align/7taa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.266861 /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod(21): Reading nostruct-align/1oasA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-10353/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod (nostruct-align/1oasA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.644848 /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod(22): Reading nostruct-align/1qq9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod (nostruct-align/1qq9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.416887 /projects/compbio/experiments/models.97/pdb/1j/1jmmA/nostruct-align/1jmmA.t2k-w0.5.mod(22): Reading nostruct-align/1jmmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmmA/nostruct-align/1jmmA.t2k-w0.5.mod (nostruct-align/1jmmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmmA/nostruct-align/1jmmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.600832 /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod(21): Reading nostruct-align/1uby.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-7388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod (nostruct-align/1uby.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.401857 /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod(22): Reading nostruct-align/1lmb3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3321/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod (nostruct-align/1lmb3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.149849 /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod(22): Reading nostruct-align/1kk1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod (nostruct-align/1kk1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.297882 /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod(22): Reading nostruct-align/1hfoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod (nostruct-align/1hfoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516861 /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod(21): Reading nostruct-align/1shfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod (nostruct-align/1shfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.328842 /projects/compbio/experiments/models.97/pdb/1l/1lg7A/nostruct-align/1lg7A.t2k-w0.5.mod(22): Reading nostruct-align/1lg7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-32318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lg7A/nostruct-align/1lg7A.t2k-w0.5.mod (nostruct-align/1lg7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lg7A/nostruct-align/1lg7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.322866 /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod(21): Reading nostruct-align/1fps.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-11289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod (nostruct-align/1fps.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.339859 /projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod(21): Reading nostruct-align/1mzm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod (nostruct-align/1mzm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.106867 /projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod(21): Reading nostruct-align/1vrtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod (nostruct-align/1vrtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.415854 /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod(22): Reading nostruct-align/1uch.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod (nostruct-align/1uch.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.767849 /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod(22): Reading nostruct-align/16vpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-7887/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod (nostruct-align/16vpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.163847 /projects/compbio/experiments/models.97/pdb/1l/1l2wI/nostruct-align/1l2wI.t2k-w0.5.mod(22): Reading nostruct-align/1l2wI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2wI/nostruct-align/1l2wI.t2k-w0.5.mod (nostruct-align/1l2wI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l2wI/nostruct-align/1l2wI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.215866 /projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod(22): Reading nostruct-align/1fh9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod (nostruct-align/1fh9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.433840 /projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod(21): Reading nostruct-align/1f3yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod (nostruct-align/1f3yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.157833 /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod(22): Reading nostruct-align/1ccwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod (nostruct-align/1ccwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.350843 /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod(21): Reading nostruct-align/1at3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod (nostruct-align/1at3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.358831 /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod(22): Reading nostruct-align/1ccwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod (nostruct-align/1ccwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.493828 /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod(21): Reading nostruct-align/1oatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod (nostruct-align/1oatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.019875 /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod(21): Reading nostruct-align/1rlaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-4721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod (nostruct-align/1rlaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.244827 /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod(22): Reading nostruct-align/1eyhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21629/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod (nostruct-align/1eyhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.418835 /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod(21): Reading nostruct-align/1dgfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod (nostruct-align/1dgfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.376884 /projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod(21): Reading nostruct-align/1udb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod (nostruct-align/1udb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.462843 /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod(21): Reading nostruct-align/1udc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod (nostruct-align/1udc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.377846 /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod(22): Reading nostruct-align/1i12A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod (nostruct-align/1i12A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.029886 /projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod(21): Reading nostruct-align/1fa0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-3047/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod (nostruct-align/1fa0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.732878 /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod(21): Reading nostruct-align/1udg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod (nostruct-align/1udg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516844 /projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod(21): Reading nostruct-align/1fa0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod (nostruct-align/1fa0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.781885 /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod(21): Reading nostruct-align/1udh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16161/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod (nostruct-align/1udh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.507860 /projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod(21): Reading nostruct-align/1ho8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod (nostruct-align/1ho8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.257849 /projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod(21): Reading nostruct-align/1el4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12134/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod (nostruct-align/1el4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.984831 /projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod(21): Reading nostruct-align/1e7tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-5522/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod (nostruct-align/1e7tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.491877 /projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod(22): Reading nostruct-align/1kxgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod (nostruct-align/1kxgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.935835 /projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod(21): Reading nostruct-align/1qhsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod (nostruct-align/1qhsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.922850 /projects/compbio/experiments/models.97/pdb/1j/1jfeA/nostruct-align/1jfeA.t2k-w0.5.mod(22): Reading nostruct-align/1jfeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfeA/nostruct-align/1jfeA.t2k-w0.5.mod (nostruct-align/1jfeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfeA/nostruct-align/1jfeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.402861 /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod(21): Reading nostruct-align/1frb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod (nostruct-align/1frb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.201866 /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod(21): Reading nostruct-align/1duzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31010/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod (nostruct-align/1duzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.113874 /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod(21): Reading nostruct-align/1hucA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-1543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod (nostruct-align/1hucA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.277851 /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod(21): Reading nostruct-align/1duzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-32279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod (nostruct-align/1duzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.005846 /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod(21): Reading nostruct-align/1frd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod (nostruct-align/1frd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.504831 /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod(22): Reading nostruct-align/1c24A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod (nostruct-align/1c24A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.573837 /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod(21): Reading nostruct-align/1fre.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16440/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod (nostruct-align/1fre.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.523836 /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod(22): Reading nostruct-align/2cpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod (nostruct-align/2cpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.388882 /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod(21): Reading nostruct-align/1ckaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod (nostruct-align/1ckaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.093876 /projects/compbio/experiments/models.97/pdb/1k/1kiuB/nostruct-align/1kiuB.t2k-w0.5.mod(22): Reading nostruct-align/1kiuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kiuB/nostruct-align/1kiuB.t2k-w0.5.mod (nostruct-align/1kiuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kiuB/nostruct-align/1kiuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.100840 /projects/compbio/experiments/models.97/pdb/1k/1k81A/nostruct-align/1k81A.t2k-w0.5.mod(22): Reading nostruct-align/1k81A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-4396/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k81A/nostruct-align/1k81A.t2k-w0.5.mod (nostruct-align/1k81A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k81A/nostruct-align/1k81A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.168839 /projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod(22): Reading nostruct-align/1fuoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod (nostruct-align/1fuoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.843870 /projects/compbio/experiments/models.97/pdb/1j/1jtyA/nostruct-align/1jtyA.t2k-w0.5.mod(22): Reading nostruct-align/1jtyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtyA/nostruct-align/1jtyA.t2k-w0.5.mod (nostruct-align/1jtyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jtyA/nostruct-align/1jtyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.574848 /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod(21): Reading nostruct-align/1pedA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-15896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod (nostruct-align/1pedA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.324873 /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod(22): Reading nostruct-align/1ecmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod (nostruct-align/1ecmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.421879 /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod(22): Reading nostruct-align/1el5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod (nostruct-align/1el5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.270866 /projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod(22): Reading nostruct-align/1e7uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10757/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod (nostruct-align/1e7uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.854839 /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod(21): Reading nostruct-align/1qj2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26035/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod (nostruct-align/1qj2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.720860 /projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod(22): Reading nostruct-align/1qhtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod (nostruct-align/1qhtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.806837 /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod(21): Reading nostruct-align/4xis.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod (nostruct-align/4xis.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.055874 /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod(22): Reading nostruct-align/1qj2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32491/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod (nostruct-align/1qj2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.909859 /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod(21): Reading nostruct-align/1fsb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod (nostruct-align/1fsb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.369884 /projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod(22): Reading nostruct-align/1dw9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod (nostruct-align/1dw9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.996880 /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod(22): Reading nostruct-align/1qj2C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod (nostruct-align/1qj2C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.888845 /projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod(21): Reading nostruct-align/1fsd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod (nostruct-align/1fsd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.532858 /projects/compbio/experiments/models.97/pdb/1r/1rdzA/nostruct-align/1rdzA.t2k-w0.5.mod(22): Reading nostruct-align/1rdzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-16491/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdzA/nostruct-align/1rdzA.t2k-w0.5.mod (nostruct-align/1rdzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rdzA/nostruct-align/1rdzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.124865 /projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod(22): Reading nostruct-align/1kblA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod (nostruct-align/1kblA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.846863 /projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod(21): Reading nostruct-align/1g7jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod (nostruct-align/1g7jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.286886 /projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod(21): Reading nostruct-align/1g7jB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod (nostruct-align/1g7jB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.056849 /projects/compbio/experiments/models.97/pdb/1k/1k82A/nostruct-align/1k82A.t2k-w0.5.mod(22): Reading nostruct-align/1k82A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k82A/nostruct-align/1k82A.t2k-w0.5.mod (nostruct-align/1k82A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k82A/nostruct-align/1k82A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.082851 /projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod(21): Reading nostruct-align/2oneA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31463/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod (nostruct-align/2oneA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864876 /projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod(21): Reading nostruct-align/1hh0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod (nostruct-align/1hh0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.727833 /projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod(22): Reading nostruct-align/1d4fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1465/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod (nostruct-align/1d4fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.096844 /projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod(21): Reading nostruct-align/1fsu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-32080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod (nostruct-align/1fsu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.228886 /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod(21): Reading nostruct-align/1ntcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod (nostruct-align/1ntcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.910870 /projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod(21): Reading nostruct-align/1e0lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1514/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod (nostruct-align/1e0lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.697836 /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod(22): Reading nostruct-align/1gqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod (nostruct-align/1gqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.536877 /projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod(21): Reading nostruct-align/1dp0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-9380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod (nostruct-align/1dp0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.326868 /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod(22): Reading nostruct-align/1fsz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod (nostruct-align/1fsz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.980877 /projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod(21): Reading nostruct-align/2cavA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-18696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod (nostruct-align/2cavA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.143843 /projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod(22): Reading nostruct-align/1el6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-449/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod (nostruct-align/1el6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.149832 /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod(21): Reading nostruct-align/1el6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod (nostruct-align/1el6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.149832 /projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod(21): Reading nostruct-align/1ijaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod (nostruct-align/1ijaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.852831 /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod(21): Reading nostruct-align/1b4rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-6606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod (nostruct-align/1b4rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.267860 /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod(21): Reading nostruct-align/1qhuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-14777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod (nostruct-align/1qhuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.917885 /projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod(22): Reading nostruct-align/1jfgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod (nostruct-align/1jfgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.326834 /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod(21): Reading nostruct-align/1yghA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-27208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod (nostruct-align/1yghA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.045876 /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod(21): Reading nostruct-align/1hueA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-12652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod (nostruct-align/1hueA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.954836 /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod(22): Reading nostruct-align/1cczA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod (nostruct-align/1cczA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.654858 /projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod(21): Reading nostruct-align/4bp2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3478/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod (nostruct-align/4bp2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.447847 /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod(22): Reading nostruct-align/2btcI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21862/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod (nostruct-align/2btcI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.334837 /projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod(21): Reading nostruct-align/1hh1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod (nostruct-align/1hh1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.059889 /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21): Reading nostruct-align/1fts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod (nostruct-align/1fts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.644880 /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod(21): Reading nostruct-align/1adeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod (nostruct-align/1adeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.675884 /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod(21): Reading nostruct-align/3fib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-18852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod (nostruct-align/3fib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.649851 /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod(21): Reading nostruct-align/1ftt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28012/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod (nostruct-align/1ftt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.207855 /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod(21): Reading nostruct-align/1ibyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod (nostruct-align/1ibyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.211857 /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k-w0.5.mod(22): Reading nostruct-align/1gs5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-28399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k-w0.5.mod (nostruct-align/1gs5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.260885 /projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod(22): Reading nostruct-align/1gqwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-28898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod (nostruct-align/1gqwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.254829 /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k-w0.5.mod(22): Reading nostruct-align/1ijbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k-w0.5.mod (nostruct-align/1ijbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.406874 /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod(22): Reading nostruct-align/1e7wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod (nostruct-align/1e7wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.137856 /projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod(21): Reading nostruct-align/1dgiR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-26916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod (nostruct-align/1dgiR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.302855 /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod(22): Reading nostruct-align/1qj4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod (nostruct-align/1qj4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.748848 /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod(22): Reading nostruct-align/1qhvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod (nostruct-align/1qhvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.488863 /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod(21): Reading nostruct-align/1fua.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod (nostruct-align/1fua.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.412853 /projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod(22): Reading nostruct-align/1hufA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod (nostruct-align/1hufA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.250847 /projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod(21): Reading nostruct-align/1ce9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24291/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod (nostruct-align/1ce9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.097858 /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod(21): Reading nostruct-align/1ce9C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17219/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod (nostruct-align/1ce9C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.097858 /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod(21): Reading nostruct-align/1vdeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod (nostruct-align/1vdeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.265841 /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod(21): Reading nostruct-align/1pszA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32512/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod (nostruct-align/1pszA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.145838 /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod(21): Reading nostruct-align/1fnhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod (nostruct-align/1fnhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.323858 /projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod(22): Reading nostruct-align/1jmrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod (nostruct-align/1jmrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.588839 /projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod(22): Reading nostruct-align/1gjnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod (nostruct-align/1gjnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.456831 /projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod(22): Reading nostruct-align/1c8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod (nostruct-align/1c8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.225874 /projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod(21): Reading nostruct-align/1eylA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod (nostruct-align/1eylA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.120876 /projects/compbio/experiments/models.97/pdb/1d/1dgjA/nostruct-align/1dgjA.t2k-w0.5.mod(22): Reading nostruct-align/1dgjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgjA/nostruct-align/1dgjA.t2k-w0.5.mod (nostruct-align/1dgjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgjA/nostruct-align/1dgjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.131851 /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod(21): Reading nostruct-align/1shkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15117/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod (nostruct-align/1shkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.170860 /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod(21): Reading nostruct-align/1fus.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod (nostruct-align/1fus.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.943871 /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod(21): Reading nostruct-align/1furA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-26470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod (nostruct-align/1furA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.676840 /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod(21): Reading nostruct-align/1ecpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-27718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod (nostruct-align/1ecpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.537888 /projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod(21): Reading nostruct-align/1ibzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-27685/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod (nostruct-align/1ibzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.040834 /projects/compbio/experiments/models.97/pdb/1k/1kqaA/nostruct-align/1kqaA.t2k-w0.5.mod(22): Reading nostruct-align/1kqaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32248/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqaA/nostruct-align/1kqaA.t2k-w0.5.mod (nostruct-align/1kqaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqaA/nostruct-align/1kqaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.570856 /projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod(22): Reading nostruct-align/1qamA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-24133/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod (nostruct-align/1qamA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.339857 /projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod(21): Reading nostruct-align/1e96B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod (nostruct-align/1e96B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.830828 /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod(22): Reading nostruct-align/1bgvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod (nostruct-align/1bgvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.615856 /projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod(22): Reading nostruct-align/1hh2P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod (nostruct-align/1hh2P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.277872 /projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod(22): Reading nostruct-align/1qj5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod (nostruct-align/1qj5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.717836 /projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod(22): Reading nostruct-align/1jfiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7983/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod (nostruct-align/1jfiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.756868 /projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod(21): Reading nostruct-align/1jfiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod (nostruct-align/1jfiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.517841 /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod(22): Reading nostruct-align/1c28A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-19904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod (nostruct-align/1c28A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.713882 /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod(21): Reading nostruct-align/1gceA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod (nostruct-align/1gceA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.254885 /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod(22): Reading nostruct-align/1vdfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod (nostruct-align/1vdfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.474844 /projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod(21): Reading nostruct-align/1g0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-4408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod (nostruct-align/1g0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.200869 /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod(21): Reading nostruct-align/1arzC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-32099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod (nostruct-align/1arzC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.502844 /projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod(22): Reading nostruct-align/1jmsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-23110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod (nostruct-align/1jmsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.220863 /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod(21): Reading nostruct-align/2pcdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30636/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod (nostruct-align/2pcdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.159834 /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod(21): Reading nostruct-align/1fvl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-15951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod (nostruct-align/1fvl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.743872 /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod(22): Reading nostruct-align/1ckeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod (nostruct-align/1ckeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.094885 /projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod(22): Reading nostruct-align/1c8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-5302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod (nostruct-align/1c8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.290880 /projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod(22): Reading nostruct-align/1kiyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod (nostruct-align/1kiyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.331833 /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod(21): Reading nostruct-align/3mefA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod (nostruct-align/3mefA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.664835 /projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod(22): Reading nostruct-align/1k6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-27014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod (nostruct-align/1k6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.859884 /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod(22): Reading nostruct-align/1hfuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod (nostruct-align/1hfuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.179832 /projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod(22): Reading nostruct-align/1fw1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21715/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod (nostruct-align/1fw1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.995865 /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod(21): Reading nostruct-align/2pcdM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-25082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod (nostruct-align/2pcdM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.686853 /projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod(21): Reading nostruct-align/1i17A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod (nostruct-align/1i17A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.562878 /projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod(21): Reading nostruct-align/1dp3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod (nostruct-align/1dp3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.150875 /projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod(21): Reading nostruct-align/2hsdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30422/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod (nostruct-align/2hsdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.727846 /projects/compbio/experiments/models.97/pdb/1l/1lmhA/nostruct-align/1lmhA.t2k-w0.5.mod(22): Reading nostruct-align/1lmhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30286/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lmhA/nostruct-align/1lmhA.t2k-w0.5.mod (nostruct-align/1lmhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lmhA/nostruct-align/1lmhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.014828 /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod(21): Reading nostruct-align/1dgkN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod (nostruct-align/1dgkN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.724848 /projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod(21): Reading nostruct-align/1ijdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-5266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod (nostruct-align/1ijdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.523876 /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod(22): Reading nostruct-align/1bi5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod (nostruct-align/1bi5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.002863 /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod(22): Reading nostruct-align/1b63A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod (nostruct-align/1b63A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.996862 /projects/compbio/experiments/models.97/pdb/1k/1kxlA/nostruct-align/1kxlA.t2k-w0.5.mod(22): Reading nostruct-align/1kxlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxlA/nostruct-align/1kxlA.t2k-w0.5.mod (nostruct-align/1kxlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxlA/nostruct-align/1kxlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.677834 /projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod(22): Reading nostruct-align/1qhxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod (nostruct-align/1qhxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.922850 /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod(21): Reading nostruct-align/1zymA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod (nostruct-align/1zymA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.582842 /projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod(22): Reading nostruct-align/1kbpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1665/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod (nostruct-align/1kbpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.471872 /projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod(22): Reading nostruct-align/1g0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod (nostruct-align/1g0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.326839 /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod(21): Reading nostruct-align/2btfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod (nostruct-align/2btfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.257864 /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod(22): Reading nostruct-align/1sacA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod (nostruct-align/1sacA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.837858 /projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod(22): Reading nostruct-align/1qpaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod (nostruct-align/1qpaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.424856 /projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod(22): Reading nostruct-align/1jmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod (nostruct-align/1jmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.897842 /projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod(22): Reading nostruct-align/1jmtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod (nostruct-align/1jmtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.765869 /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod(22): Reading nostruct-align/153l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod (nostruct-align/153l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.415882 /projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod(22): Reading nostruct-align/1k6xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod (nostruct-align/1k6xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.546881 /projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod(21): Reading nostruct-align/1ixxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod (nostruct-align/1ixxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.664848 /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod(21): Reading nostruct-align/1ixxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod (nostruct-align/1ixxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.290836 /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod(22): Reading nostruct-align/1ecrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod (nostruct-align/1ecrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.774845 /projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod(21): Reading nostruct-align/1i18A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-17747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod (nostruct-align/1i18A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.196871 /projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod(22): Reading nostruct-align/1dp4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod (nostruct-align/1dp4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.692842 /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod(21): Reading nostruct-align/3eugA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod (nostruct-align/3eugA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.592869 /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod(22): Reading nostruct-align/1b4vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod (nostruct-align/1b4vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.667852 /projects/compbio/experiments/models.97/pdb/1j/1jfkA/nostruct-align/1jfkA.t2k-w0.5.mod(22): Reading nostruct-align/1jfkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfkA/nostruct-align/1jfkA.t2k-w0.5.mod (nostruct-align/1jfkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfkA/nostruct-align/1jfkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.479868 /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod(21): Reading nostruct-align/1fxd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod (nostruct-align/1fxd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.948847 /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod(22): Reading nostruct-align/1ltsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod (nostruct-align/1ltsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.755859 /projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod(22): Reading nostruct-align/1kbqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod (nostruct-align/1kbqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.099842 /projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod(21): Reading nostruct-align/2ki5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod (nostruct-align/2ki5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.450830 /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod(21): Reading nostruct-align/1bi6H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod (nostruct-align/1bi6H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.951832 /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod(22): Reading nostruct-align/1ltsC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod (nostruct-align/1ltsC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.511864 /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod(21): Reading nostruct-align/1ltsD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod (nostruct-align/1ltsD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.074835 /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod(21): Reading nostruct-align/1mpyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28291/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod (nostruct-align/1mpyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.946867 /projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod(21): Reading nostruct-align/1qpbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod (nostruct-align/1qpbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.911880 /projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod(22): Reading nostruct-align/1jmuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod (nostruct-align/1jmuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.747849 /projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod(22): Reading nostruct-align/1jmuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-1728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod (nostruct-align/1jmuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.962883 /projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod(21): Reading nostruct-align/1azeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-13584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod (nostruct-align/1azeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.135843 /projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod(21): Reading nostruct-align/1g7oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-2725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod (nostruct-align/1g7oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.461836 /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod(21): Reading nostruct-align/1xyzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-18073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod (nostruct-align/1xyzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.606833 /projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod(21): Reading nostruct-align/1hh5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod (nostruct-align/1hh5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.330872 /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod(22): Reading nostruct-align/1ecsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod (nostruct-align/1ecsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.868889 /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod(21): Reading nostruct-align/1tdtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod (nostruct-align/1tdtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.982838 /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod(22): Reading nostruct-align/1i19A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod (nostruct-align/1i19A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.752861 /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod(21): Reading nostruct-align/1qapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod (nostruct-align/1qapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.895842 /projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod(21): Reading nostruct-align/1dp5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28726/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod (nostruct-align/1dp5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.115835 /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod(21): Reading nostruct-align/1soxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-18790/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod (nostruct-align/1soxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.456882 /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod(22): Reading nostruct-align/1nar.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14116/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod (nostruct-align/1nar.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.052866 /projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod(21): Reading nostruct-align/1i7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod (nostruct-align/1i7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.144878 /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod(22): Reading nostruct-align/1b65A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod (nostruct-align/1b65A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.763828 /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod(22): Reading nostruct-align/1qj8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod (nostruct-align/1qj8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.312887 /projects/compbio/experiments/models.97/pdb/1j/1jflA/nostruct-align/1jflA.t2k-w0.5.mod(22): Reading nostruct-align/1jflA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jflA/nostruct-align/1jflA.t2k-w0.5.mod (nostruct-align/1jflA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jflA/nostruct-align/1jflA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.970852 /projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod(21): Reading nostruct-align/1nc8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod (nostruct-align/1nc8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.449844 /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod(21): Reading nostruct-align/1fyc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-28590/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod (nostruct-align/1fyc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.849842 /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod(21): Reading nostruct-align/1bgyE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod (nostruct-align/1bgyE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.630857 /projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod(21): Reading nostruct-align/155c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod (nostruct-align/155c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.861839 /projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod(21): Reading nostruct-align/1iqpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-16649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod (nostruct-align/1iqpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.431858 /projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod(21): Reading nostruct-align/1mr8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod (nostruct-align/1mr8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.113848 /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod(22): Reading nostruct-align/1qpcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod (nostruct-align/1qpcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.955841 /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod(21): Reading nostruct-align/1fnlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod (nostruct-align/1fnlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.430868 /projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod(22): Reading nostruct-align/1jmvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod (nostruct-align/1jmvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.924877 /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod(21): Reading nostruct-align/1ukz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-3886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod (nostruct-align/1ukz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.381887 /projects/compbio/experiments/models.97/pdb/1g/1g7pA/nostruct-align/1g7pA.t2k-w0.5.mod(22): Reading nostruct-align/1g7pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7pA/nostruct-align/1g7pA.t2k-w0.5.mod (nostruct-align/1g7pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7pA/nostruct-align/1g7pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.550880 /projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod(21): Reading nostruct-align/1eypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod (nostruct-align/1eypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.041883 /projects/compbio/experiments/models.97/pdb/1g/1g7pB/nostruct-align/1g7pB.t2k-w0.5.mod(22): Reading nostruct-align/1g7pB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7pB/nostruct-align/1g7pB.t2k-w0.5.mod (nostruct-align/1g7pB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7pB/nostruct-align/1g7pB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.899858 /projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod(22): Reading nostruct-align/1k6zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod (nostruct-align/1k6zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.598845 /projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod(21): Reading nostruct-align/1dgnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod (nostruct-align/1dgnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.660852 /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod(21): Reading nostruct-align/1lfaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod (nostruct-align/1lfaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.187881 /projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod(22): Reading nostruct-align/1h54A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10202/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod (nostruct-align/1h54A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.097836 /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod(21): Reading nostruct-align/1adjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-24533/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod (nostruct-align/1adjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.030840 /projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod(21): Reading nostruct-align/1h54B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-10884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod (nostruct-align/1h54B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.611881 /projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod(21): Reading nostruct-align/1ee2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod (nostruct-align/1ee2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.823885 /projects/compbio/experiments/models.97/pdb/1g/1gl0I/nostruct-align/1gl0I.t2k-w0.5.mod(22): Reading nostruct-align/1gl0I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl0I/nostruct-align/1gl0I.t2k-w0.5.mod (nostruct-align/1gl0I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl0I/nostruct-align/1gl0I.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.384857 /projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod(22): Reading nostruct-align/1e20A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod (nostruct-align/1e20A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.037828 /projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod(21): Reading nostruct-align/1fa8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25425/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod (nostruct-align/1fa8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.465885 /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod(22): Reading nostruct-align/1a8rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod (nostruct-align/1a8rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.296837 /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod(22): Reading nostruct-align/12asA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-29301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod (nostruct-align/12asA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.404848 /projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod(22): Reading nostruct-align/1ijgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod (nostruct-align/1ijgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.271835 /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod(22): Reading nostruct-align/3sdhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod (nostruct-align/3sdhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.685860 /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod(21): Reading nostruct-align/1ulo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod (nostruct-align/1ulo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.992832 /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod(21): Reading nostruct-align/1b66A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14906/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod (nostruct-align/1b66A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.018835 /projects/compbio/experiments/models.97/pdb/1j/1jfmA/nostruct-align/1jfmA.t2k-w0.5.mod(22): Reading nostruct-align/1jfmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfmA/nostruct-align/1jfmA.t2k-w0.5.mod (nostruct-align/1jfmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfmA/nostruct-align/1jfmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.080845 /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod(21): Reading nostruct-align/1ulp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-25016/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod (nostruct-align/1ulp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.992832 /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod(22): Reading nostruct-align/1iqqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod (nostruct-align/1iqqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.494871 /projects/compbio/experiments/models.97/pdb/1j/1jo5A/nostruct-align/1jo5A.t2k-w0.5.mod(22): Reading nostruct-align/1jo5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jo5A/nostruct-align/1jo5A.t2k-w0.5.mod (nostruct-align/1jo5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jo5A/nostruct-align/1jo5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.791845 /projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod(21): Reading nostruct-align/1ckiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod (nostruct-align/1ckiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.683876 /projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod(22): Reading nostruct-align/1c8gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod (nostruct-align/1c8gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.113850 /projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod(22): Reading nostruct-align/1eyqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod (nostruct-align/1eyqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.074873 /projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod(21): Reading nostruct-align/1ncg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod (nostruct-align/1ncg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.218880 /projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod(22): Reading nostruct-align/1hh7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-16914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod (nostruct-align/1hh7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.371845 /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod(21): Reading nostruct-align/1a1iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod (nostruct-align/1a1iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -31.659828 /projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod(22): Reading nostruct-align/1gl1I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod (nostruct-align/1gl1I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.541830 /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod(22): Reading nostruct-align/1tf4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod (nostruct-align/1tf4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.995874 /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod(22): Reading nostruct-align/1kqfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod (nostruct-align/1kqfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.654831 /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod(22): Reading nostruct-align/1kqfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod (nostruct-align/1kqfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.363838 /projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod(21): Reading nostruct-align/1dnyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod (nostruct-align/1dnyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.641842 /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod(22): Reading nostruct-align/1kqfC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod (nostruct-align/1kqfC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.117832 /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod(21): Reading nostruct-align/1ncs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod (nostruct-align/1ncs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.188875 /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod(21): Reading nostruct-align/1nct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-17333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod (nostruct-align/1nct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.231846 /projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod(22): Reading nostruct-align/1ijhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod (nostruct-align/1ijhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.264830 /projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod(22): Reading nostruct-align/1i7fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod (nostruct-align/1i7fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.392879 /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod(21): Reading nostruct-align/1gyfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod (nostruct-align/1gyfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.013874 /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod(21): Reading nostruct-align/1ncx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-7957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod (nostruct-align/1ncx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.501875 /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod(22): Reading nostruct-align/1m6pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod (nostruct-align/1m6pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.304869 /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod(21): Reading nostruct-align/1b67A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod (nostruct-align/1b67A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.877844 /projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod(21): Reading nostruct-align/1dvbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2433/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod (nostruct-align/1dvbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.354855 /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod(22): Reading nostruct-align/1hulA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod (nostruct-align/1hulA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.973858 /projects/compbio/experiments/models.97/pdb/1k/1kxpD/nostruct-align/1kxpD.t2k-w0.5.mod(22): Reading nostruct-align/1kxpD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxpD/nostruct-align/1kxpD.t2k-w0.5.mod (nostruct-align/1kxpD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxpD/nostruct-align/1kxpD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.921837 /projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod(21): Reading nostruct-align/1g0hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod (nostruct-align/1g0hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.268879 /projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod(22): Reading nostruct-align/1iqrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod (nostruct-align/1iqrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.283861 /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod(22): Reading nostruct-align/1dp7P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23053/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod (nostruct-align/1dp7P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.252861 /projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod(22): Reading nostruct-align/1fnnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod (nostruct-align/1fnnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.854851 /projects/compbio/experiments/models.97/pdb/1j/1jo6A/nostruct-align/1jo6A.t2k-w0.5.mod(22): Reading nostruct-align/1jo6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jo6A/nostruct-align/1jo6A.t2k-w0.5.mod (nostruct-align/1jo6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jo6A/nostruct-align/1jo6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.424885 /projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod(22): Reading nostruct-align/1jmxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod (nostruct-align/1jmxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.622850 /projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod(22): Reading nostruct-align/1jmxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-15109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod (nostruct-align/1jmxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.534842 /projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod(22): Reading nostruct-align/1gl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15783/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod (nostruct-align/1gl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.358833 /projects/compbio/experiments/models.97/pdb/1a/1a16/nostruct-align/1a16.t2k-w0.5.mod(22): Reading nostruct-align/1a16.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-8634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a16/nostruct-align/1a16.t2k-w0.5.mod (nostruct-align/1a16.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a16/nostruct-align/1a16.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.834843 /projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod(22): Reading nostruct-align/1gl2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod (nostruct-align/1gl2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.967846 /projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod(22): Reading nostruct-align/1gl2C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod (nostruct-align/1gl2C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.099873 /projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod(22): Reading nostruct-align/1g7rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31259/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod (nostruct-align/1g7rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.346844 /projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod(22): Reading nostruct-align/1eyrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod (nostruct-align/1eyrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.691837 /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod(21): Reading nostruct-align/1a17.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod (nostruct-align/1a17.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.849836 /projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod(22): Reading nostruct-align/1gl2D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod (nostruct-align/1gl2D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.905855 /projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod(22): Reading nostruct-align/1jmxG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod (nostruct-align/1jmxG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.094839 /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod(21): Reading nostruct-align/1ndh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod (nostruct-align/1ndh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.251858 /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod(22): Reading nostruct-align/1hh8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod (nostruct-align/1hh8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.716852 /projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod(22): Reading nostruct-align/1fuxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod (nostruct-align/1fuxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.974880 /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod(21): Reading nostruct-align/1ndk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32536/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod (nostruct-align/1ndk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.257837 /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod(22): Reading nostruct-align/1ee4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod (nostruct-align/1ee4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.158844 /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod(21): Reading nostruct-align/1e0tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod (nostruct-align/1e0tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.871859 /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod(21): Reading nostruct-align/1une.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod (nostruct-align/1une.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.488838 /projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod(22): Reading nostruct-align/1i7gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19188/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod (nostruct-align/1i7gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.151833 /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod(22): Reading nostruct-align/1a0i.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod (nostruct-align/1a0i.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.307863 /projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod(21): Reading nostruct-align/1b68A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod (nostruct-align/1b68A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.803848 /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod(21): Reading nostruct-align/1humA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod (nostruct-align/1humA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.847862 /projects/compbio/experiments/models.97/pdb/1k/1kxqE/nostruct-align/1kxqE.t2k-w0.5.mod(22): Reading nostruct-align/1kxqE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxqE/nostruct-align/1kxqE.t2k-w0.5.mod (nostruct-align/1kxqE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxqE/nostruct-align/1kxqE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.897873 /projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod(21): Reading nostruct-align/2cab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod (nostruct-align/2cab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.304888 /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod(21): Reading nostruct-align/1eriA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod (nostruct-align/1eriA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.544880 /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod(21): Reading nostruct-align/1a0p.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod (nostruct-align/1a0p.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.230881 /projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod(22): Reading nostruct-align/2cae.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod (nostruct-align/2cae.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.739857 /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod(21): Reading nostruct-align/1boeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod (nostruct-align/1boeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.893885 /projects/compbio/experiments/models.97/pdb/1f/1fnoA/nostruct-align/1fnoA.t2k-w0.5.mod(22): Reading nostruct-align/1fnoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25526/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnoA/nostruct-align/1fnoA.t2k-w0.5.mod (nostruct-align/1fnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnoA/nostruct-align/1fnoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.927883 /projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod(21): Reading nostruct-align/1gjuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-13699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod (nostruct-align/1gjuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.391884 /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod(21): Reading nostruct-align/1a26.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-21808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod (nostruct-align/1a26.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.542873 /projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod(22): Reading nostruct-align/1a27.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-11921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod (nostruct-align/1a27.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.087835 /projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod(21): Reading nostruct-align/1g7sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-26028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod (nostruct-align/1g7sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.915831 /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod(22): Reading nostruct-align/1d4oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod (nostruct-align/1d4oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.088875 /projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod(22): Reading nostruct-align/1bvoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod (nostruct-align/1bvoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.550886 /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod(22): Reading nostruct-align/7a3hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod (nostruct-align/7a3hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.554871 /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod(22): Reading nostruct-align/1lfdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod (nostruct-align/1lfdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.253864 /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod(22): Reading nostruct-align/1cruA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod (nostruct-align/1cruA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.817869 /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod(21): Reading nostruct-align/1tf6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod (nostruct-align/1tf6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -41.692848 /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod(21): Reading nostruct-align/2cas.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-20437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod (nostruct-align/2cas.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.309883 /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod(21): Reading nostruct-align/1bb1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod (nostruct-align/1bb1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.252840 /projects/compbio/experiments/models.97/pdb/1k/1kqhA/nostruct-align/1kqhA.t2k-w0.5.mod(22): Reading nostruct-align/1kqhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24939/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqhA/nostruct-align/1kqhA.t2k-w0.5.mod (nostruct-align/1kqhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqhA/nostruct-align/1kqhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.114845 /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod(22): Reading nostruct-align/1bb1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod (nostruct-align/1bb1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.290873 /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod(21): Reading nostruct-align/1qatB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-6614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod (nostruct-align/1qatB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.823881 /projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod(22): Reading nostruct-align/1bb1C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18907/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod (nostruct-align/1bb1C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.997845 /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod(21): Reading nostruct-align/1neq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod (nostruct-align/1neq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.214842 /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod(21): Reading nostruct-align/1ng1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod (nostruct-align/1ng1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.565861 /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod(21): Reading nostruct-align/1a1d.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod (nostruct-align/1a1d.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.950853 /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod(21): Reading nostruct-align/1uok.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod (nostruct-align/1uok.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.093840 /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod(21): Reading nostruct-align/1neu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25337/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod (nostruct-align/1neu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.935829 /projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod(22): Reading nostruct-align/1i7hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod (nostruct-align/1i7hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.830868 /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod(21): Reading nostruct-align/1new.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod (nostruct-align/1new.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.330872 /projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod(22): Reading nostruct-align/1kxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod (nostruct-align/1kxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.386858 /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod(21): Reading nostruct-align/1bvp1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod (nostruct-align/1bvp1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.982878 /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod(21): Reading nostruct-align/2cba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod (nostruct-align/2cba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.520834 /projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod(22): Reading nostruct-align/1kbvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod (nostruct-align/1kbvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.265860 /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod(21): Reading nostruct-align/1r2aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15598/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod (nostruct-align/1r2aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.379875 /projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod(21): Reading nostruct-align/1erjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-18818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod (nostruct-align/1erjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.278866 /projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod(22): Reading nostruct-align/1is2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod (nostruct-align/1is2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.664833 /projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod(22): Reading nostruct-align/2cbf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod (nostruct-align/2cbf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.608862 /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod(22): Reading nostruct-align/1uox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod (nostruct-align/1uox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.909845 /projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod(21): Reading nostruct-align/1a1s.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-30754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod (nostruct-align/1a1s.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.865866 /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod(21): Reading nostruct-align/1nfa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod (nostruct-align/1nfa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.041864 /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod(22): Reading nostruct-align/1a32.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-3837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod (nostruct-align/1a32.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.282881 /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod(22): Reading nostruct-align/1jo8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod (nostruct-align/1jo8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.177858 /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod(21): Reading nostruct-align/2cbh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16053/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod (nostruct-align/2cbh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.796875 /projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod(21): Reading nostruct-align/1cklA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-26427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod (nostruct-align/1cklA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.488836 /projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod(22): Reading nostruct-align/1gl4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod (nostruct-align/1gl4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.277868 /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod(21): Reading nostruct-align/1cklB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod (nostruct-align/1cklB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.008835 /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod(21): Reading nostruct-align/1a1w.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-27892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod (nostruct-align/1a1w.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.781834 /projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod(22): Reading nostruct-align/1gl4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod (nostruct-align/1gl4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.844845 /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod(22): Reading nostruct-align/1a1x.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19620/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod (nostruct-align/1a1x.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.560867 /projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod(21): Reading nostruct-align/1g7tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-24866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod (nostruct-align/1g7tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.455870 /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod(21): Reading nostruct-align/1di0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod (nostruct-align/1di0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.354843 /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod(21): Reading nostruct-align/1a1z.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-6057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod (nostruct-align/1a1z.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.727873 /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod(21): Reading nostruct-align/1shsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod (nostruct-align/1shsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.764839 /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod(21): Reading nostruct-align/1dgrC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15364/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod (nostruct-align/1dgrC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.933872 /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod(21): Reading nostruct-align/2cbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-10717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod (nostruct-align/2cbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.772863 /projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod(22): Reading nostruct-align/1ee6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod (nostruct-align/1ee6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.127840 /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod(21): Reading nostruct-align/1ecxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18962/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod (nostruct-align/1ecxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.391855 /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod(21): Reading nostruct-align/1nfn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod (nostruct-align/1nfn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.866856 /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod(22): Reading nostruct-align/1qauA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod (nostruct-align/1qauA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.362856 /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod(21): Reading nostruct-align/1nfp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod (nostruct-align/1nfp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.712873 /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod(21): Reading nostruct-align/1dgrM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13601/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod (nostruct-align/1dgrM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.744865 /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod(21): Reading nostruct-align/1dgrN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15629/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod (nostruct-align/1dgrN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.268854 /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod(21): Reading nostruct-align/1a8vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod (nostruct-align/1a8vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.588839 /projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod(21): Reading nostruct-align/1fggA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-21664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod (nostruct-align/1fggA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.890860 /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod(22): Reading nostruct-align/1cdcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod (nostruct-align/1cdcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.157885 /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod(21): Reading nostruct-align/1cdcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod (nostruct-align/1cdcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.467852 /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod(21): Reading nostruct-align/1gcmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-23758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod (nostruct-align/1gcmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.067856 /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod(21): Reading nostruct-align/1dgrV.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-3056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod (nostruct-align/1dgrV.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.268854 /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod(21): Reading nostruct-align/1dgrW.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27121/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod (nostruct-align/1dgrW.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.525879 /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod(22): Reading nostruct-align/1a41.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod (nostruct-align/1a41.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.603865 /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod(21): Reading nostruct-align/2tbvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod (nostruct-align/2tbvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.986885 /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod(22): Reading nostruct-align/1ckmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25873/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod (nostruct-align/1ckmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.394848 /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod(21): Reading nostruct-align/1a44.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod (nostruct-align/1a44.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.528866 /projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod(22): Reading nostruct-align/1gjwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod (nostruct-align/1gjwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.452852 /projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod(21): Reading nostruct-align/1c8kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod (nostruct-align/1c8kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.565830 /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod(21): Reading nostruct-align/1vkxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8160/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod (nostruct-align/1vkxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.797834 /projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod(22): Reading nostruct-align/1di1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod (nostruct-align/1di1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.987846 /projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod(21): Reading nostruct-align/1dgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26473/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod (nostruct-align/1dgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.070864 /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod(22): Reading nostruct-align/1a48.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24116/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod (nostruct-align/1a48.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.402863 /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod(22): Reading nostruct-align/1bvqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod (nostruct-align/1bvqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.464849 /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod(21): Reading nostruct-align/2ak3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod (nostruct-align/2ak3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.307880 /projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod(22): Reading nostruct-align/1fw9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod (nostruct-align/1fw9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.523870 /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod(21): Reading nostruct-align/1adoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod (nostruct-align/1adoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.160854 /projects/compbio/experiments/models.97/pdb/1h/1h59B/nostruct-align/1h59B.t2k-w0.5.mod(22): Reading nostruct-align/1h59B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h59B/nostruct-align/1h59B.t2k-w0.5.mod (nostruct-align/1h59B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h59B/nostruct-align/1h59B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.923872 /projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod(21): Reading nostruct-align/1e25A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-20852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod (nostruct-align/1e25A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.638878 /projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod(21): Reading nostruct-align/1e0wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7587/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod (nostruct-align/1e0wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.289850 /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod(22): Reading nostruct-align/1ct5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod (nostruct-align/1ct5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.372875 /projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod(22): Reading nostruct-align/1qavA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod (nostruct-align/1qavA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.418844 /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod(21): Reading nostruct-align/2qwc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod (nostruct-align/2qwc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.376850 /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod(21): Reading nostruct-align/1ngr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-16689/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod (nostruct-align/1ngr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.349865 /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod(21): Reading nostruct-align/1a3c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1042/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod (nostruct-align/1a3c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.711845 /projects/compbio/experiments/models.97/pdb/1c/1crwG/nostruct-align/1crwG.t2k-w0.5.mod(22): Reading nostruct-align/1crwG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-14778/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crwG/nostruct-align/1crwG.t2k-w0.5.mod (nostruct-align/1crwG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crwG/nostruct-align/1crwG.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.899878 /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod(22): Reading nostruct-align/1am7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2017/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod (nostruct-align/1am7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.705835 /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod(21): Reading nostruct-align/1yveI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod (nostruct-align/1yveI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.446840 /projects/compbio/experiments/models.97/pdb/1e/1ekbB/nostruct-align/1ekbB.t2k-w0.5.mod(22): Reading nostruct-align/1ekbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-26264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekbB/nostruct-align/1ekbB.t2k-w0.5.mod (nostruct-align/1ekbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekbB/nostruct-align/1ekbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.353828 /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod(21): Reading nostruct-align/1yveJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod (nostruct-align/1yveJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.236864 /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod(21): Reading nostruct-align/1a3h.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-8330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod (nostruct-align/1a3h.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.498875 /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod(22): Reading nostruct-align/1jfrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25979/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod (nostruct-align/1jfrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.425859 /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod(21): Reading nostruct-align/1a3k.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6878/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod (nostruct-align/1a3k.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.428873 /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k-w0.5.mod(22): Reading nostruct-align/1ltzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k-w0.5.mod (nostruct-align/1ltzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.980860 /projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod(21): Reading nostruct-align/1dvfD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-1024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod (nostruct-align/1dvfD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.276848 /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod(21): Reading nostruct-align/2viuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod (nostruct-align/2viuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.577860 /projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod(22): Reading nostruct-align/1a3p.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod (nostruct-align/1a3p.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.217867 /projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod(22): Reading nostruct-align/1iqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10306/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod (nostruct-align/1iqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.228888 /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod(21): Reading nostruct-align/2viuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod (nostruct-align/2viuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.734835 /projects/compbio/experiments/models.97/pdb/1h/1ha2A/nostruct-align/1ha2A.t2k-w0.5.mod(22): Reading nostruct-align/1ha2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha2A/nostruct-align/1ha2A.t2k-w0.5.mod (nostruct-align/1ha2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ha2A/nostruct-align/1ha2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.582863 /projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod(21): Reading nostruct-align/1fp0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-31686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod (nostruct-align/1fp0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.766876 /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod(22): Reading nostruct-align/1a53.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5508/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod (nostruct-align/1a53.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.599859 /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod(21): Reading nostruct-align/1cknA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod (nostruct-align/1cknA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.219883 /projects/compbio/experiments/models.97/pdb/1g/1g7vA/nostruct-align/1g7vA.t2k-w0.5.mod(22): Reading nostruct-align/1g7vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7vA/nostruct-align/1g7vA.t2k-w0.5.mod (nostruct-align/1g7vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g7vA/nostruct-align/1g7vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.597843 /projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod(22): Reading nostruct-align/1g94A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod (nostruct-align/1g94A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.655832 /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod(22): Reading nostruct-align/1eyvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod (nostruct-align/1eyvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.581871 /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod(22): Reading nostruct-align/1di2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod (nostruct-align/1di2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.567865 /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod(21): Reading nostruct-align/1a58.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-27692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod (nostruct-align/1a58.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.429848 /projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod(21): Reading nostruct-align/1a3z.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod (nostruct-align/1a3z.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.874870 /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod(21): Reading nostruct-align/2hlcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-22333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod (nostruct-align/2hlcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.618862 /projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod(21): Reading nostruct-align/1a59.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod (nostruct-align/1a59.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.675882 /projects/compbio/experiments/models.97/pdb/1l/1l3eA/nostruct-align/1l3eA.t2k-w0.5.mod(22): Reading nostruct-align/1l3eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l3eA/nostruct-align/1l3eA.t2k-w0.5.mod (nostruct-align/1l3eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l3eA/nostruct-align/1l3eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.026863 /projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod(22): Reading nostruct-align/1ee8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod (nostruct-align/1ee8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.779886 /projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod(21): Reading nostruct-align/1crxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod (nostruct-align/1crxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.970886 /projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod(22): Reading nostruct-align/1i0aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod (nostruct-align/1i0aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.774874 /projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod(21): Reading nostruct-align/1qc5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3254/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod (nostruct-align/1qc5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.418877 /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod(21): Reading nostruct-align/1nhp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod (nostruct-align/1nhp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.392868 /projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod(22): Reading nostruct-align/1or3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod (nostruct-align/1or3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.973877 /projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod(22): Reading nostruct-align/1nhs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod (nostruct-align/1nhs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.751856 /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod(21): Reading nostruct-align/2cdx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-3618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod (nostruct-align/2cdx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.319841 /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod(22): Reading nostruct-align/1qawF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod (nostruct-align/1qawF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.203848 /projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod(21): Reading nostruct-align/1e8aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod (nostruct-align/1e8aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.543879 /projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod(21): Reading nostruct-align/1i7kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-22953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod (nostruct-align/1i7kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.892864 /projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod(21): Reading nostruct-align/1huqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5698/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod (nostruct-align/1huqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.622881 /projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod(21): Reading nostruct-align/1gcoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod (nostruct-align/1gcoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.409851 /projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod(22): Reading nostruct-align/1ermA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod (nostruct-align/1ermA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.217834 /projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod(21): Reading nostruct-align/1ha3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7757/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod (nostruct-align/1ha3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.651863 /projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod(22): Reading nostruct-align/1fnsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2397/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod (nostruct-align/1fnsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.324831 /projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod(22): Reading nostruct-align/1czaN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod (nostruct-align/1czaN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.756851 /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod(22): Reading nostruct-align/1a62.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod (nostruct-align/1a62.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.874838 /projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod(22): Reading nostruct-align/1fp1D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod (nostruct-align/1fp1D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864832 /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod(21): Reading nostruct-align/1nif.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-12045/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod (nostruct-align/1nif.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.139881 /projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod(22): Reading nostruct-align/1eywA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod (nostruct-align/1eywA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.011862 /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod(21): Reading nostruct-align/1dguA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod (nostruct-align/1dguA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.325869 /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod(21): Reading nostruct-align/1a68.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9515/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod (nostruct-align/1a68.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.300888 /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod(21): Reading nostruct-align/1bvsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod (nostruct-align/1bvsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.630886 /projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod(21): Reading nostruct-align/1ee9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod (nostruct-align/1ee9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.136831 /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod(21): Reading nostruct-align/351c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod (nostruct-align/351c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.233862 /projects/compbio/experiments/models.97/pdb/1k/1kqlA/nostruct-align/1kqlA.t2k-w0.5.mod(22): Reading nostruct-align/1kqlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-18836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqlA/nostruct-align/1kqlA.t2k-w0.5.mod (nostruct-align/1kqlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqlA/nostruct-align/1kqlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.105873 /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod(21): Reading nostruct-align/1qaxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17381/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod (nostruct-align/1qaxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.511864 /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod(21): Reading nostruct-align/1uaaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-14223/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod (nostruct-align/1uaaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.352846 /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod(22): Reading nostruct-align/1ush.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod (nostruct-align/1ush.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.263836 /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod(22): Reading nostruct-align/1am9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod (nostruct-align/1am9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.682867 /projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod(21): Reading nostruct-align/1e8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-26439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod (nostruct-align/1e8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.922882 /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod(21): Reading nostruct-align/1gylA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod (nostruct-align/1gylA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.915878 /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod(21): Reading nostruct-align/1fgjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30075/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod (nostruct-align/1fgjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.324867 /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod(21): Reading nostruct-align/1a5j.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17952/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod (nostruct-align/1a5j.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.236843 /projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod(22): Reading nostruct-align/1jh2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod (nostruct-align/1jh2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.860872 /projects/compbio/experiments/models.97/pdb/1k/1kxvC/nostruct-align/1kxvC.t2k-w0.5.mod(22): Reading nostruct-align/1kxvC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-12525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxvC/nostruct-align/1kxvC.t2k-w0.5.mod (nostruct-align/1kxvC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxvC/nostruct-align/1kxvC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.913841 /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod(21): Reading nostruct-align/1hurA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-18567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod (nostruct-align/1hurA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.257854 /projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod(21): Reading nostruct-align/1gcpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-5912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod (nostruct-align/1gcpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.035877 /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod(22): Reading nostruct-align/1c1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod (nostruct-align/1c1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.630863 /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod(21): Reading nostruct-align/1a5r.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-3556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod (nostruct-align/1a5r.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.869856 /projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod(21): Reading nostruct-align/1a70.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod (nostruct-align/1a70.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.462849 /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod(22): Reading nostruct-align/1fp2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30160/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod (nostruct-align/1fp2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.080839 /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod(22): Reading nostruct-align/1a5t.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod (nostruct-align/1a5t.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.169834 /projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod(22): Reading nostruct-align/1c8nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2272/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod (nostruct-align/1c8nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.583862 /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod(22): Reading nostruct-align/1a76.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod (nostruct-align/1a76.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.024836 /projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod(21): Reading nostruct-align/1g96A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod (nostruct-align/1g96A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.916866 /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod(21): Reading nostruct-align/1d4tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod (nostruct-align/1d4tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.732887 /projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod(22): Reading nostruct-align/9gafA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4660/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod (nostruct-align/9gafA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.129848 /projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod(21): Reading nostruct-align/1bx2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-26747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod (nostruct-align/1bx2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.608870 /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod(21): Reading nostruct-align/2eiaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod (nostruct-align/2eiaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.770874 /projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod(22): Reading nostruct-align/1crzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod (nostruct-align/1crzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.137833 /projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod(21): Reading nostruct-align/1i0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25364/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod (nostruct-align/1i0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.059872 /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod(22): Reading nostruct-align/1qc7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3163/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod (nostruct-align/1qc7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.364859 /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod(22): Reading nostruct-align/1utg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod (nostruct-align/1utg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.066841 /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod(22): Reading nostruct-align/1regX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25673/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod (nostruct-align/1regX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.193840 /projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod(22): Reading nostruct-align/1ekeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod (nostruct-align/1ekeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.386860 /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod(22): Reading nostruct-align/1a6f.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod (nostruct-align/1a6f.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.727869 /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod(21): Reading nostruct-align/1tlfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22672/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod (nostruct-align/1tlfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.141836 /projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod(22): Reading nostruct-align/1e8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod (nostruct-align/1e8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.087887 /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod(21): Reading nostruct-align/1fgkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-14399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod (nostruct-align/1fgkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.520872 /projects/compbio/experiments/models.97/pdb/1j/1jh3A/nostruct-align/1jh3A.t2k-w0.5.mod(22): Reading nostruct-align/1jh3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh3A/nostruct-align/1jh3A.t2k-w0.5.mod (nostruct-align/1jh3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jh3A/nostruct-align/1jh3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.252836 /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod(21): Reading nostruct-align/1jfuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod (nostruct-align/1jfuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.740850 /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod(21): Reading nostruct-align/1gab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod (nostruct-align/1gab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.193871 /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod(21): Reading nostruct-align/1a6l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-11181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod (nostruct-align/1a6l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.638845 /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod(22): Reading nostruct-align/1hw1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod (nostruct-align/1hw1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.392859 /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod(22): Reading nostruct-align/1a6m.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod (nostruct-align/1a6m.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.406881 /projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod(21): Reading nostruct-align/1gcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod (nostruct-align/1gcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.810865 /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod(21): Reading nostruct-align/1vdrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod (nostruct-align/1vdrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.602859 /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod(21): Reading nostruct-align/1r2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-13755/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod (nostruct-align/1r2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.116879 /projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod(21): Reading nostruct-align/1g0oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod (nostruct-align/1g0oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.775833 /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod(22): Reading nostruct-align/1gcqC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod (nostruct-align/1gcqC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.991856 /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod(22): Reading nostruct-align/1a6q.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod (nostruct-align/1a6q.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.645885 /projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod(21): Reading nostruct-align/1a80.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod (nostruct-align/1a80.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.998835 /projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod(22): Reading nostruct-align/1fnuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod (nostruct-align/1fnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.498886 /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod(22): Reading nostruct-align/1gai.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod (nostruct-align/1gai.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.979834 /projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod(22): Reading nostruct-align/1fp3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1944/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod (nostruct-align/1fp3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.884842 /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod(21): Reading nostruct-align/1a6s.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-25987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod (nostruct-align/1a6s.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.498844 /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod(21): Reading nostruct-align/1gal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-32540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod (nostruct-align/1gal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.271830 /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod(21): Reading nostruct-align/1ckqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod (nostruct-align/1ckqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.544880 /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod(22): Reading nostruct-align/1nkd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod (nostruct-align/1nkd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.014837 /projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod(21): Reading nostruct-align/1c8oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod (nostruct-align/1c8oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.619883 /projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod(21): Reading nostruct-align/1g97A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod (nostruct-align/1g97A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.494879 /projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod(21): Reading nostruct-align/1eyyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod (nostruct-align/1eyyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.275860 /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod(22): Reading nostruct-align/1dgwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod (nostruct-align/1dgwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.289858 /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod(21): Reading nostruct-align/1a87.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod (nostruct-align/1a87.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.350843 /projects/compbio/experiments/models.97/pdb/1j/1juhA/nostruct-align/1juhA.t2k-w0.5.mod(22): Reading nostruct-align/1juhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-27288/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1juhA/nostruct-align/1juhA.t2k-w0.5.mod (nostruct-align/1juhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1juhA/nostruct-align/1juhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.489841 /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod(21): Reading nostruct-align/1nkl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-21909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod (nostruct-align/1nkl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.494839 /projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod(21): Reading nostruct-align/1icfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-15270/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod (nostruct-align/1icfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.626852 /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod(22): Reading nostruct-align/1e29A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod (nostruct-align/1e29A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.097857 /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod(21): Reading nostruct-align/1ct9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod (nostruct-align/1ct9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.646858 /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod(22): Reading nostruct-align/1i0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod (nostruct-align/1i0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.988863 /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod(21): Reading nostruct-align/1icfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod (nostruct-align/1icfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.255836 /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod(21): Reading nostruct-align/1qazA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod (nostruct-align/1qazA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.989853 /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod(22): Reading nostruct-align/1nkr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11660/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod (nostruct-align/1nkr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.516861 /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod(21): Reading nostruct-align/1hnjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26258/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod (nostruct-align/1hnjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.799852 /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod(22): Reading nostruct-align/1icfI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30133/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod (nostruct-align/1icfI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.777851 /projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod(22): Reading nostruct-align/1ekfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod (nostruct-align/1ekfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.500841 /projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod(22): Reading nostruct-align/1tlgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-17060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod (nostruct-align/1tlgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.990873 /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod(21): Reading nostruct-align/2bmhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5880/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod (nostruct-align/2bmhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.117830 /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod(22): Reading nostruct-align/1a7j.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod (nostruct-align/1a7j.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.659885 /projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod(22): Reading nostruct-align/1jfvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod (nostruct-align/1jfvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.798883 /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod(22): Reading nostruct-align/1dvjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod (nostruct-align/1dvjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.661852 /projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod(21): Reading nostruct-align/1dvjC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-10140/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod (nostruct-align/1dvjC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.810839 /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod(22): Reading nostruct-align/1dgwX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod (nostruct-align/1dgwX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.299883 /projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod(22): Reading nostruct-align/1is8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod (nostruct-align/1is8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.812851 /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod(22): Reading nostruct-align/1iqzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6061/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod (nostruct-align/1iqzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.268887 /projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod(22): Reading nostruct-align/1gbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod (nostruct-align/1gbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.753876 /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod(22): Reading nostruct-align/1dgwY.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod (nostruct-align/1dgwY.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.401842 /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod(21): Reading nostruct-align/1bolA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-984/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod (nostruct-align/1bolA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.868834 /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod(21): Reading nostruct-align/1a7s.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24049/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod (nostruct-align/1a7s.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.642887 /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod(21): Reading nostruct-align/1a91.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7702/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod (nostruct-align/1a91.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.282835 /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod(21): Reading nostruct-align/1qpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-18247/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod (nostruct-align/1qpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.023849 /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod(21): Reading nostruct-align/1azpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15906/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod (nostruct-align/1azpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387875 /projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod(21): Reading nostruct-align/1c8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod (nostruct-align/1c8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.063841 /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod(21): Reading nostruct-align/1a7w.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod (nostruct-align/1a7w.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.990887 /projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod(22): Reading nostruct-align/1eyzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod (nostruct-align/1eyzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.743860 /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod(22): Reading nostruct-align/1k7cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-16082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod (nostruct-align/1k7cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.362877 /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod(22): Reading nostruct-align/1di6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod (nostruct-align/1di6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.758837 /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod(21): Reading nostruct-align/1d4vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4436/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod (nostruct-align/1d4vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.053844 /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod(22): Reading nostruct-align/1bx4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11093/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod (nostruct-align/1bx4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.378874 /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod(21): Reading nostruct-align/1gbs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-23551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod (nostruct-align/1gbs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.604877 /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod(21): Reading nostruct-align/1d4vB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod (nostruct-align/1d4vB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.135887 /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod(21): Reading nostruct-align/3rabA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28125/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod (nostruct-align/3rabA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.816875 /projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod(21): Reading nostruct-align/1qc9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod (nostruct-align/1qc9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.377836 /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod(21): Reading nostruct-align/1a8b.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod (nostruct-align/1a8b.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.757851 /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod(22): Reading nostruct-align/1nlr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod (nostruct-align/1nlr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.250881 /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod(22): Reading nostruct-align/1nls.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod (nostruct-align/1nls.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.328854 /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod(22): Reading nostruct-align/1a8d.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod (nostruct-align/1a8d.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.557877 /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod(22): Reading nostruct-align/1a8e.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod (nostruct-align/1a8e.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.911839 /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod(21): Reading nostruct-align/1ekgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod (nostruct-align/1ekgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.336842 /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod(22): Reading nostruct-align/1ijqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14931/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod (nostruct-align/1ijqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.311872 /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod(21): Reading nostruct-align/1a8h.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-8417/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod (nostruct-align/1a8h.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.389832 /projects/compbio/experiments/models.97/pdb/1g/1gyoA/nostruct-align/1gyoA.t2k-w0.5.mod(22): Reading nostruct-align/1gyoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gyoA/nostruct-align/1gyoA.t2k-w0.5.mod (nostruct-align/1gyoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gyoA/nostruct-align/1gyoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.520859 /projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod(22): Reading nostruct-align/1i7oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19773/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod (nostruct-align/1i7oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.755863 /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod(22): Reading nostruct-align/1a8i.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-31970/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod (nostruct-align/1a8i.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.479858 /projects/compbio/experiments/models.97/pdb/1k/1kz7A/nostruct-align/1kz7A.t2k-w0.5.mod(22): Reading nostruct-align/1kz7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-23553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kz7A/nostruct-align/1kz7A.t2k-w0.5.mod (nostruct-align/1kz7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kz7A/nostruct-align/1kz7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.911861 /projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod(22): Reading nostruct-align/1qidA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod (nostruct-align/1qidA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.216827 /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod(21): Reading nostruct-align/1gca.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod (nostruct-align/1gca.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.087862 /projects/compbio/experiments/models.97/pdb/1j/1jh5A/nostruct-align/1jh5A.t2k-w0.5.mod(22): Reading nostruct-align/1jh5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29179/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh5A/nostruct-align/1jh5A.t2k-w0.5.mod (nostruct-align/1jh5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jh5A/nostruct-align/1jh5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.677868 /projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod(22): Reading nostruct-align/1f4kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12687/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod (nostruct-align/1f4kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.722858 /projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod(21): Reading nostruct-align/1jfwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod (nostruct-align/1jfwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.156885 /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod(21): Reading nostruct-align/1gcb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod (nostruct-align/1gcb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.051828 /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod(22): Reading nostruct-align/1dvkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod (nostruct-align/1dvkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.937880 /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod(22): Reading nostruct-align/1a8l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12230/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod (nostruct-align/1a8l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.440847 /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod(21): Reading nostruct-align/1huuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod (nostruct-align/1huuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.882889 /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod(21): Reading nostruct-align/1c1gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod (nostruct-align/1c1gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.591866 /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22): Reading nostruct-align/7odcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod (nostruct-align/7odcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.926868 /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod(22): Reading nostruct-align/1a8o.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod (nostruct-align/1a8o.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.540869 /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod(21): Reading nostruct-align/1c1gB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-31031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod (nostruct-align/1c1gB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.591866 /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod(21): Reading nostruct-align/1gcf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod (nostruct-align/1gcf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.811876 /projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod(21): Reading nostruct-align/1a8p.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod (nostruct-align/1a8p.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.747864 /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod(21): Reading nostruct-align/1c1gC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod (nostruct-align/1c1gC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.665852 /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod(21): Reading nostruct-align/1a8q.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod (nostruct-align/1a8q.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.371841 /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod(21): Reading nostruct-align/1c1gD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod (nostruct-align/1c1gD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.665852 /projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod(21): Reading nostruct-align/1bomA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod (nostruct-align/1bomA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.930836 /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod(21): Reading nostruct-align/1spbP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod (nostruct-align/1spbP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.989843 /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod(22): Reading nostruct-align/1gci.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod (nostruct-align/1gci.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.649855 /projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod(21): Reading nostruct-align/1a8s.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod (nostruct-align/1a8s.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.181841 /projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod(21): Reading nostruct-align/1bomB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-15008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod (nostruct-align/1bomB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.243849 /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod(21): Reading nostruct-align/1azqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod (nostruct-align/1azqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387875 /projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod(22): Reading nostruct-align/1g99A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5243/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod (nostruct-align/1g99A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.828882 /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod(22): Reading nostruct-align/1a8y.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod (nostruct-align/1a8y.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.024845 /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod(21): Reading nostruct-align/1bvwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7541/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod (nostruct-align/1bvwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.663851 /projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod(22): Reading nostruct-align/1a31A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod (nostruct-align/1a31A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.380884 /projects/compbio/experiments/models.97/pdb/1i/1ichA/nostruct-align/1ichA.t2k-w0.5.mod(22): Reading nostruct-align/1ichA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24308/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ichA/nostruct-align/1ichA.t2k-w0.5.mod (nostruct-align/1ichA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ichA/nostruct-align/1ichA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.613857 /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod(21): Reading nostruct-align/2cxbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod (nostruct-align/2cxbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.546885 /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k-w0.5.mod(22): Reading nostruct-align/1kqpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k-w0.5.mod (nostruct-align/1kqpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.376865 /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod(21): Reading nostruct-align/1vsgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod (nostruct-align/1vsgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.292866 /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod(22): Reading nostruct-align/1czfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod (nostruct-align/1czfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.676867 /projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod(22): Reading nostruct-align/1i7pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod (nostruct-align/1i7pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.494850 /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod(21): Reading nostruct-align/1gypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16043/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod (nostruct-align/1gypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.140877 /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod(21): Reading nostruct-align/1bhdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod (nostruct-align/1bhdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.121847 /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod(22): Reading nostruct-align/1jh6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod (nostruct-align/1jh6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.790836 /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod(22): Reading nostruct-align/1jfxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod (nostruct-align/1jfxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.305866 /projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod(22): Reading nostruct-align/1f4lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod (nostruct-align/1f4lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.830841 /projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod(21): Reading nostruct-align/1gdc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3345/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod (nostruct-align/1gdc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.917881 /projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod(22): Reading nostruct-align/1huvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod (nostruct-align/1huvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.719881 /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod(22): Reading nostruct-align/1gctA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod (nostruct-align/1gctA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.743883 /projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod(21): Reading nostruct-align/1g0rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11539/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod (nostruct-align/1g0rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.074850 /projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod(22): Reading nostruct-align/1et0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod (nostruct-align/1et0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.382879 /projects/compbio/experiments/models.97/pdb/1h/1ha8A/nostruct-align/1ha8A.t2k-w0.5.mod(22): Reading nostruct-align/1ha8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27978/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha8A/nostruct-align/1ha8A.t2k-w0.5.mod (nostruct-align/1ha8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ha8A/nostruct-align/1ha8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.862862 /projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod(22): Reading nostruct-align/1fp6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod (nostruct-align/1fp6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.410849 /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod(22): Reading nostruct-align/1qpoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod (nostruct-align/1qpoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.607849 /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod(21): Reading nostruct-align/1cktA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-25508/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod (nostruct-align/1cktA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.635830 /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod(21): Reading nostruct-align/1a9v.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-23762/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod (nostruct-align/1a9v.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.127853 /projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod(21): Reading nostruct-align/1dgzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod (nostruct-align/1dgzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.777863 /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod(21): Reading nostruct-align/1d66A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17788/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod (nostruct-align/1d66A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.308882 /projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod(21): Reading nostruct-align/1d4xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod (nostruct-align/1d4xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.456839 /projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod(21): Reading nostruct-align/1fvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-31937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod (nostruct-align/1fvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.944855 /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod(22): Reading nostruct-align/1l3kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-4085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod (nostruct-align/1l3kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.072832 /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod(21): Reading nostruct-align/1a1tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-16936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod (nostruct-align/1a1tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.031879 /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod(21): Reading nostruct-align/1uxc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-6099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod (nostruct-align/1uxc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.349848 /projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod(21): Reading nostruct-align/1iciA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod (nostruct-align/1iciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.756865 /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod(21): Reading nostruct-align/1uxd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-26225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod (nostruct-align/1uxd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.596872 /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod(22): Reading nostruct-align/1d4xG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12223/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod (nostruct-align/1d4xG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.421875 /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod(21): Reading nostruct-align/1nnt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-5239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod (nostruct-align/1nnt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.654882 /projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod(22): Reading nostruct-align/1e8gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod (nostruct-align/1e8gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.665869 /projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod(21): Reading nostruct-align/1i7qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-4316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod (nostruct-align/1i7qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.312840 /projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod(22): Reading nostruct-align/1i7qB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod (nostruct-align/1i7qB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.374882 /projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod(22): Reading nostruct-align/1hw5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod (nostruct-align/1hw5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.968861 /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod(21): Reading nostruct-align/1cdkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-17776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod (nostruct-align/1cdkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.554840 /projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod(22): Reading nostruct-align/1gcuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod (nostruct-align/1gcuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.454859 /projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod(22): Reading nostruct-align/1g0sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod (nostruct-align/1g0sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.963829 /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod(22): Reading nostruct-align/1et1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod (nostruct-align/1et1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.745872 /projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod(21): Reading nostruct-align/1ha9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27288/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod (nostruct-align/1ha9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.575836 /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod(21): Reading nostruct-align/1booA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod (nostruct-align/1booA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.852829 /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod(22): Reading nostruct-align/1uxy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod (nostruct-align/1uxy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.065872 /projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod(21): Reading nostruct-align/1qppA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod (nostruct-align/1qppA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.161869 /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod(21): Reading nostruct-align/1noa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod (nostruct-align/1noa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.947878 /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod(21): Reading nostruct-align/1ckuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod (nostruct-align/1ckuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.142851 /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod(21): Reading nostruct-align/1gen.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod (nostruct-align/1gen.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.433886 /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod(22): Reading nostruct-align/1azsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod (nostruct-align/1azsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.833839 /projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod(21): Reading nostruct-align/1azsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10117/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod (nostruct-align/1azsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.537884 /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k-w0.5.mod(22): Reading nostruct-align/1l3lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k-w0.5.mod (nostruct-align/1l3lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.258856 /projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod(22): Reading nostruct-align/2eifA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod (nostruct-align/2eifA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.315853 /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod(21): Reading nostruct-align/1nom.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-22173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod (nostruct-align/1nom.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.339876 /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod(21): Reading nostruct-align/1icjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28243/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod (nostruct-align/1icjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.894850 /projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod(22): Reading nostruct-align/1i0hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod (nostruct-align/1i0hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.786886 /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod(21): Reading nostruct-align/1bvyF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod (nostruct-align/1bvyF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.079882 /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod(22): Reading nostruct-align/1kqrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22125/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod (nostruct-align/1kqrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.713861 /projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod(22): Reading nostruct-align/1hnnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod (nostruct-align/1hnnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.421865 /projects/compbio/experiments/models.97/pdb/1l/1lo6A/nostruct-align/1lo6A.t2k-w0.5.mod(22): Reading nostruct-align/1lo6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-28625/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lo6A/nostruct-align/1lo6A.t2k-w0.5.mod (nostruct-align/1lo6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lo6A/nostruct-align/1lo6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.041859 /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod(21): Reading nostruct-align/2prgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod (nostruct-align/2prgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.695889 /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod(21): Reading nostruct-align/1pmaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-11487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod (nostruct-align/1pmaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.120867 /projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod(22): Reading nostruct-align/1ekjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod (nostruct-align/1ekjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.765856 /projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod(22): Reading nostruct-align/1ijtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod (nostruct-align/1ijtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.438877 /projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod(21): Reading nostruct-align/1ekjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-13804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod (nostruct-align/1ekjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.700829 /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod(21): Reading nostruct-align/2prgC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod (nostruct-align/2prgC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.199829 /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod(22): Reading nostruct-align/1nox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod (nostruct-align/1nox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.217831 /projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod(22): Reading nostruct-align/1jfzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod (nostruct-align/1jfzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.837843 /projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod(22): Reading nostruct-align/1jh8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod (nostruct-align/1jh8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.452866 /projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod(21): Reading nostruct-align/1hw6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod (nostruct-align/1hw6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.461849 /projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod(22): Reading nostruct-align/1huxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16640/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod (nostruct-align/1huxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.596886 /projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod(21): Reading nostruct-align/1gcvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod (nostruct-align/1gcvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.327831 /projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod(21): Reading nostruct-align/1gcvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod (nostruct-align/1gcvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.562870 /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod(21): Reading nostruct-align/2btvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod (nostruct-align/2btvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.836836 /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod(21): Reading nostruct-align/1pmaP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod (nostruct-align/1pmaP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.383873 /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod(21): Reading nostruct-align/1hgeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod (nostruct-align/1hgeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387884 /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod(21): Reading nostruct-align/1bvzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod (nostruct-align/1bvzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.675850 /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod(21): Reading nostruct-align/1hgeB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod (nostruct-align/1hgeB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.717852 /projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod(21): Reading nostruct-align/1af6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-14844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod (nostruct-align/1af6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.938887 /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod(22): Reading nostruct-align/1npk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod (nostruct-align/1npk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.067875 /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod(22): Reading nostruct-align/1a34A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod (nostruct-align/1a34A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.346876 /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod(21): Reading nostruct-align/2yhx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-3651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod (nostruct-align/2yhx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.282875 /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod(21): Reading nostruct-align/1griA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod (nostruct-align/1griA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.791845 /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading nostruct-align/1hnoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -36.626850 /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k-w0.5.mod(22): Reading nostruct-align/1lo7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-26943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k-w0.5.mod (nostruct-align/1lo7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.649878 /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod(21): Reading nostruct-align/1bhgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod (nostruct-align/1bhgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.577831 /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod(21): Reading nostruct-align/1b5eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11590/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod (nostruct-align/1b5eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.752874 /projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod(22): Reading nostruct-align/1dvoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod (nostruct-align/1dvoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.433867 /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod(21): Reading nostruct-align/1nfdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod (nostruct-align/1nfdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.981867 /projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod(22): Reading nostruct-align/1hw7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod (nostruct-align/1hw7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.221838 /projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod(21): Reading nostruct-align/1ge5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod (nostruct-align/1ge5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.810881 /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod(22): Reading nostruct-align/1c1kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod (nostruct-align/1c1kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.022888 /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod(21): Reading nostruct-align/1db1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-13487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod (nostruct-align/1db1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.982885 /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod(21): Reading nostruct-align/2cmd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8161/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod (nostruct-align/2cmd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.892830 /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod(22): Reading nostruct-align/1qr0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod (nostruct-align/1qr0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.124834 /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod(22): Reading nostruct-align/1jndA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod (nostruct-align/1jndA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.237852 /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod(22): Reading nostruct-align/1cm5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod (nostruct-align/1cm5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.741873 /projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod(21): Reading nostruct-align/1ckwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-13058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod (nostruct-align/1ckwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.733862 /projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod(21): Reading nostruct-align/4tmkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod (nostruct-align/4tmkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.157858 /projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod(22): Reading nostruct-align/1c8uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod (nostruct-align/1c8uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.253866 /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k-w0.5.mod(22): Reading nostruct-align/1lfpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k-w0.5.mod (nostruct-align/1lfpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.713840 /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod(21): Reading nostruct-align/1junA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod (nostruct-align/1junA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.276846 /projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod(21): Reading nostruct-align/1dofA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-9974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod (nostruct-align/1dofA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.571861 /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod(21): Reading nostruct-align/1spgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-9347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod (nostruct-align/1spgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.309883 /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod(21): Reading nostruct-align/1spgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-7056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod (nostruct-align/1spgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.578884 /projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod(22): Reading nostruct-align/1ijvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1620/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod (nostruct-align/1ijvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.920879 /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod(21): Reading nostruct-align/1b5fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-5879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod (nostruct-align/1b5fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.069834 /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod(22): Reading nostruct-align/1f4pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11983/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod (nostruct-align/1f4pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.207857 /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod(21): Reading nostruct-align/1dvpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod (nostruct-align/1dvpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.500889 /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod(21): Reading nostruct-align/1b5fB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod (nostruct-align/1b5fB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.617838 /projects/compbio/experiments/models.97/pdb/1j/1j58A/nostruct-align/1j58A.t2k-w0.5.mod(22): Reading nostruct-align/1j58A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j58A/nostruct-align/1j58A.t2k-w0.5.mod (nostruct-align/1j58A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j58A/nostruct-align/1j58A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.638836 /projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod(22): Reading nostruct-align/1hw8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod (nostruct-align/1hw8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.322838 /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod(22): Reading nostruct-align/1lucA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod (nostruct-align/1lucA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.371853 /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod(22): Reading nostruct-align/1c1lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod (nostruct-align/1c1lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.165869 /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21): Reading nostruct-align/1lucB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod (nostruct-align/1lucB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.977882 /projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod(21): Reading nostruct-align/1g24A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-25864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod (nostruct-align/1g24A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.908880 /projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod(21): Reading nostruct-align/1qpsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod (nostruct-align/1qpsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.544880 /projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod(21): Reading nostruct-align/1nra.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod (nostruct-align/1nra.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.434845 /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod(21): Reading nostruct-align/1ghj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-25595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod (nostruct-align/1ghj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.085842 /projects/compbio/experiments/models.97/pdb/1k/1kjkA/nostruct-align/1kjkA.t2k-w0.5.mod(22): Reading nostruct-align/1kjkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjkA/nostruct-align/1kjkA.t2k-w0.5.mod (nostruct-align/1kjkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kjkA/nostruct-align/1kjkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.983866 /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod(21): Reading nostruct-align/1ghr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod (nostruct-align/1ghr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.942869 /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod(21): Reading nostruct-align/1a36A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod (nostruct-align/1a36A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.812836 /projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod(22): Reading nostruct-align/1e1aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod (nostruct-align/1e1aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.914888 /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod(22): Reading nostruct-align/1ja1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod (nostruct-align/1ja1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.637867 /projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod(21): Reading nostruct-align/1sphA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod (nostruct-align/1sphA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.007889 /projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod(21): Reading nostruct-align/1f4qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-21941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod (nostruct-align/1f4qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.815842 /projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod(22): Reading nostruct-align/1gib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod (nostruct-align/1gib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.785830 /projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod(22): Reading nostruct-align/2ran.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod (nostruct-align/2ran.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.369877 /projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod(21): Reading nostruct-align/1ge7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25539/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod (nostruct-align/1ge7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.810881 /projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod(22): Reading nostruct-align/1gcyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod (nostruct-align/1gcyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.041874 /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod(22): Reading nostruct-align/1repC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod (nostruct-align/1repC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.992876 /projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod(21): Reading nostruct-align/1g25A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15091/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod (nostruct-align/1g25A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.191847 /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod(21): Reading nostruct-align/1db3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod (nostruct-align/1db3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.538883 /projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod(22): Reading nostruct-align/1cm7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19234/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod (nostruct-align/1cm7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.217880 /projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod(22): Reading nostruct-align/1azwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod (nostruct-align/1azwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.366846 /projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod(22): Reading nostruct-align/1nsf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod (nostruct-align/1nsf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.869877 /projects/compbio/experiments/models.97/pdb/1l/1lh0A/nostruct-align/1lh0A.t2k-w0.5.mod(22): Reading nostruct-align/1lh0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-9518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lh0A/nostruct-align/1lh0A.t2k-w0.5.mod (nostruct-align/1lh0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lh0A/nostruct-align/1lh0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.603857 /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod(22): Reading nostruct-align/1nsj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod (nostruct-align/1nsj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.705856 /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod(21): Reading nostruct-align/2pkaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod (nostruct-align/2pkaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.737850 /projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod(22): Reading nostruct-align/2pkaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17278/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod (nostruct-align/2pkaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.830854 /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod(21): Reading nostruct-align/1csbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod (nostruct-align/1csbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.670879 /projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod(22): Reading nostruct-align/1p1p.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod (nostruct-align/1p1p.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.261848 /projects/compbio/experiments/models.97/pdb/1h/1hp0A/nostruct-align/1hp0A.t2k-w0.5.mod(22): Reading nostruct-align/1hp0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp0A/nostruct-align/1hp0A.t2k-w0.5.mod (nostruct-align/1hp0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hp0A/nostruct-align/1hp0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.856873 /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod(22): Reading nostruct-align/2cblA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod (nostruct-align/2cblA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.690847 /projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod(21): Reading nostruct-align/1ijxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-8231/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod (nostruct-align/1ijxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.355850 /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod(21): Reading nostruct-align/1bhjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16946/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod (nostruct-align/1bhjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.389853 /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod(22): Reading nostruct-align/1fi2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod (nostruct-align/1fi2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.368853 /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod(22): Reading nostruct-align/1f60A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod (nostruct-align/1f60A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.312876 /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod(22): Reading nostruct-align/1f60B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod (nostruct-align/1f60B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.456850 /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod(21): Reading nostruct-align/1reqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod (nostruct-align/1reqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.755886 /projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod(21): Reading nostruct-align/1ge8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod (nostruct-align/1ge8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.355869 /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod(22): Reading nostruct-align/1reqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod (nostruct-align/1reqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.196882 /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod(21): Reading nostruct-align/2cpb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod (nostruct-align/2cpb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.689835 /projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod(21): Reading nostruct-align/1g26A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod (nostruct-align/1g26A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.087841 /projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod(21): Reading nostruct-align/1g0xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod (nostruct-align/1g0xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.207834 /projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod(21): Reading nostruct-align/1erxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-20717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod (nostruct-align/1erxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.833830 /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod(21): Reading nostruct-align/1reqD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod (nostruct-align/1reqD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.163839 /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod(21): Reading nostruct-align/2cpl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod (nostruct-align/2cpl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.191883 /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k-w0.5.mod(22): Reading nostruct-align/1h4gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k-w0.5.mod (nostruct-align/1h4gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.724848 /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod(22): Reading nostruct-align/1fvgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod (nostruct-align/1fvgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.850836 /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod(21): Reading nostruct-align/2cps.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod (nostruct-align/2cps.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.689835 /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod(21): Reading nostruct-align/1ntn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod (nostruct-align/1ntn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.509829 /projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod(21): Reading nostruct-align/4sbvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod (nostruct-align/4sbvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.487833 /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod(22): Reading nostruct-align/1hp1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod (nostruct-align/1hp1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.111883 /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod(21): Reading nostruct-align/1ntr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod (nostruct-align/1ntr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.304867 /projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod(21): Reading nostruct-align/1iraX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod (nostruct-align/1iraX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.323841 /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod(22): Reading nostruct-align/1ijyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod (nostruct-align/1ijyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.345844 /projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod(21): Reading nostruct-align/1i7wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-28609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod (nostruct-align/1i7wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.562874 /projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod(22): Reading nostruct-align/1i7wB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod (nostruct-align/1i7wB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.755840 /projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod(21): Reading nostruct-align/1f61A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod (nostruct-align/1f61A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.216837 /projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod(21): Reading nostruct-align/1et7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-1275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod (nostruct-align/1et7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.260874 /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod(22): Reading nostruct-align/1bouA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31635/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod (nostruct-align/1bouA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.424875 /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod(22): Reading nostruct-align/1bouB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod (nostruct-align/1bouB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.173859 /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod(21): Reading nostruct-align/1bq3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod (nostruct-align/1bq3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.007851 /projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod(21): Reading nostruct-align/1qr4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-32339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod (nostruct-align/1qr4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.978828 /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod(21): Reading nostruct-align/1qr4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod (nostruct-align/1qr4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.478886 /projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod(22): Reading nostruct-align/1cm9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod (nostruct-align/1cm9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.066830 /projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod(22): Reading nostruct-align/3thiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20066/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod (nostruct-align/3thiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.081875 /projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod(22): Reading nostruct-align/1g0yI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod (nostruct-align/1g0yI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.879836 /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod(21): Reading nostruct-align/1gks.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-7783/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod (nostruct-align/1gks.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.415871 /projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod(21): Reading nostruct-align/1icpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-32362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod (nostruct-align/1icpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.389887 /projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod(22): Reading nostruct-align/1e1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-19664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod (nostruct-align/1e1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.520838 /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod(21): Reading nostruct-align/1babA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod (nostruct-align/1babA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.405867 /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod(21): Reading nostruct-align/1babB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod (nostruct-align/1babB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.526869 /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod(21): Reading nostruct-align/1gky.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod (nostruct-align/1gky.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.916845 /projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod(21): Reading nostruct-align/1il8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod (nostruct-align/1il8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.962847 /projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod(21): Reading nostruct-align/1cznA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod (nostruct-align/1cznA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.713835 /projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod(21): Reading nostruct-align/1i7xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-16456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod (nostruct-align/1i7xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.557842 /projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod(22): Reading nostruct-align/1fi4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-5977/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod (nostruct-align/1fi4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.412830 /projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod(21): Reading nostruct-align/1f62A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-21663/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod (nostruct-align/1f62A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.920837 /projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod(21): Reading nostruct-align/1f4tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-21371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod (nostruct-align/1f4tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.054842 /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod(22): Reading nostruct-align/1swuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod (nostruct-align/1swuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.418871 /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod(21): Reading nostruct-align/1nfiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30778/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod (nostruct-align/1nfiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.693869 /projects/compbio/experiments/models.97/pdb/1n/1nfiC/nostruct-align/1nfiC.t2k-w0.5.mod(22): Reading nostruct-align/1nfiC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3453/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfiC/nostruct-align/1nfiC.t2k-w0.5.mod (nostruct-align/1nfiC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfiC/nostruct-align/1nfiC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.800842 /projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod(22): Reading nostruct-align/1erzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14324/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod (nostruct-align/1erzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.637831 /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod(22): Reading nostruct-align/1nfiE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod (nostruct-align/1nfiE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.435867 /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod(22): Reading nostruct-align/2crd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9191/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod (nostruct-align/2crd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.677839 /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod(21): Reading nostruct-align/1sayA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod (nostruct-align/1sayA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.957880 /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod(21): Reading nostruct-align/1bovA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-13041/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod (nostruct-align/1bovA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.965849 /projects/compbio/experiments/models.97/pdb/1j/1jniA/nostruct-align/1jniA.t2k-w0.5.mod(22): Reading nostruct-align/1jniA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-4309/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jniA/nostruct-align/1jniA.t2k-w0.5.mod (nostruct-align/1jniA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jniA/nostruct-align/1jniA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.000862 /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod(21): Reading nostruct-align/1glm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod (nostruct-align/1glm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.393845 /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod(21): Reading nostruct-align/1gln.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-17194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod (nostruct-align/1gln.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.218874 /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod(22): Reading nostruct-align/1c8zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod (nostruct-align/1c8zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.921877 /projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod(22): Reading nostruct-align/2cro.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod (nostruct-align/2cro.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.605864 /projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod(22): Reading nostruct-align/1fviA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24114/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod (nostruct-align/1fviA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.799875 /projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod(21): Reading nostruct-align/1g291.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod (nostruct-align/1g291.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.530848 /projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod(21): Reading nostruct-align/1rtfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod (nostruct-align/1rtfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.246868 /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod(22): Reading nostruct-align/2reb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod (nostruct-align/2reb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.962856 /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod(21): Reading nostruct-align/1cseE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-20427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod (nostruct-align/1cseE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.197886 /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod(21): Reading nostruct-align/1dokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-26169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod (nostruct-align/1dokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.102858 /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading nostruct-align/1hnuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -36.199867 /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod(22): Reading nostruct-align/1cseI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19959/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod (nostruct-align/1cseI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.355850 /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod(22): Reading nostruct-align/1ekqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod (nostruct-align/1ekqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072845 /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod(22): Reading nostruct-align/1cf1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod (nostruct-align/1cf1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.532858 /projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod(22): Reading nostruct-align/1kcfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod (nostruct-align/1kcfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.201841 /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod(21): Reading nostruct-align/1et9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-24824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod (nostruct-align/1et9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.911840 /projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod(22): Reading nostruct-align/1k0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod (nostruct-align/1k0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.558865 /projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod(22): Reading nostruct-align/1irdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod (nostruct-align/1irdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.350836 /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod(21): Reading nostruct-align/1obpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-28644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod (nostruct-align/1obpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.538839 /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod(22): Reading nostruct-align/1irdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod (nostruct-align/1irdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.476845 /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod(22): Reading nostruct-align/1bowA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod (nostruct-align/1bowA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.171881 /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod(22): Reading nostruct-align/1qr6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod (nostruct-align/1qr6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.425859 /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod(22): Reading nostruct-align/1qpxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod (nostruct-align/1qpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387854 /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod(21): Reading nostruct-align/1nmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-11727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod (nostruct-align/1nmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.656864 /projects/compbio/experiments/models.97/pdb/1j/1jw2A/nostruct-align/1jw2A.t2k-w0.5.mod(22): Reading nostruct-align/1jw2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jw2A/nostruct-align/1jw2A.t2k-w0.5.mod (nostruct-align/1jw2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jw2A/nostruct-align/1jw2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.026863 /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod(21): Reading nostruct-align/1edhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod (nostruct-align/1edhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.490864 /projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod(21): Reading nostruct-align/1icrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod (nostruct-align/1icrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.340874 /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod(21): Reading nostruct-align/1qbeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod (nostruct-align/1qbeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.404884 /projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod(21): Reading nostruct-align/2sniI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-5608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod (nostruct-align/2sniI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.222874 /projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod(21): Reading nostruct-align/1hp4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod (nostruct-align/1hp4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.312870 /projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod(22): Reading nostruct-align/1ekrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26064/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod (nostruct-align/1ekrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.900837 /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod(22): Reading nostruct-align/1czpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod (nostruct-align/1czpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.478828 /projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod(21): Reading nostruct-align/1e8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-18621/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod (nostruct-align/1e8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.058842 /projects/compbio/experiments/models.97/pdb/1g/1gyzA/nostruct-align/1gyzA.t2k-w0.5.mod(22): Reading nostruct-align/1gyzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gyzA/nostruct-align/1gyzA.t2k-w0.5.mod (nostruct-align/1gyzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gyzA/nostruct-align/1gyzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.360886 /projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod(21): Reading nostruct-align/1fgxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod (nostruct-align/1fgxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.928839 /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod(21): Reading nostruct-align/1nfkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-13399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod (nostruct-align/1nfkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.625843 /projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod(21): Reading nostruct-align/1cdtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod (nostruct-align/1cdtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.298834 /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod(21): Reading nostruct-align/1gnd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-13409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod (nostruct-align/1gnd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.179846 /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod(21): Reading nostruct-align/3nll.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-9048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod (nostruct-align/3nll.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.410881 /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod(21): Reading nostruct-align/2ctb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod (nostruct-align/2ctb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.546841 /projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod(21): Reading nostruct-align/1gnf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod (nostruct-align/1gnf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.793880 /projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod(22): Reading nostruct-align/1k0eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod (nostruct-align/1k0eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.027851 /projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod(21): Reading nostruct-align/2e2c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod (nostruct-align/2e2c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.402828 /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod(22): Reading nostruct-align/2ctc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod (nostruct-align/2ctc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.438881 /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod(21): Reading nostruct-align/1qr7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31001/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod (nostruct-align/1qr7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.241880 /projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod(21): Reading nostruct-align/1foaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-2756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod (nostruct-align/1foaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.994850 /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod(22): Reading nostruct-align/1nxb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod (nostruct-align/1nxb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.507853 /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k-w0.5.mod(22): Reading nostruct-align/1kjqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-20247/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k-w0.5.mod (nostruct-align/1kjqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.978861 /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod(22): Reading nostruct-align/1g8eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod (nostruct-align/1g8eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.920862 /projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod(21): Reading nostruct-align/1ezeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-7649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod (nostruct-align/1ezeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.644842 /projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod(21): Reading nostruct-align/1cf2O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29726/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod (nostruct-align/1cf2O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.495832 /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod(21): Reading nostruct-align/3gcb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod (nostruct-align/3gcb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.913889 /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod(22): Reading nostruct-align/1fvkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod (nostruct-align/1fvkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.071869 /projects/compbio/experiments/models.97/pdb/1j/1jw3A/nostruct-align/1jw3A.t2k-w0.5.mod(22): Reading nostruct-align/1jw3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32082/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jw3A/nostruct-align/1jw3A.t2k-w0.5.mod (nostruct-align/1jw3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jw3A/nostruct-align/1jw3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.052837 /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod(21): Reading nostruct-align/3nn9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod (nostruct-align/3nn9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.162849 /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod(21): Reading nostruct-align/1csgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-27862/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod (nostruct-align/1csgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.894875 /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod(21): Reading nostruct-align/1rthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod (nostruct-align/1rthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.826885 /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod(22): Reading nostruct-align/1ks9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod (nostruct-align/1ks9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.628880 /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod(22): Reading nostruct-align/1vsrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod (nostruct-align/1vsrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.377855 /projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod(21): Reading nostruct-align/1qbfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-24438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod (nostruct-align/1qbfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.637877 /projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod(21): Reading nostruct-align/1hp5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-13718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod (nostruct-align/1hp5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.910860 /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod(21): Reading nostruct-align/2rgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod (nostruct-align/2rgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.444841 /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod(21): Reading nostruct-align/1czqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod (nostruct-align/1czqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.479860 /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod(21): Reading nostruct-align/1qipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22873/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod (nostruct-align/1qipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.571856 /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod(22): Reading nostruct-align/1fgyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20790/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod (nostruct-align/1fgyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.332853 /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod(21): Reading nostruct-align/2er7E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-26315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod (nostruct-align/2er7E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.985846 /projects/compbio/experiments/models.97/pdb/1c/1cf3A/nostruct-align/1cf3A.t2k-w0.5.mod(22): Reading nostruct-align/1cf3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf3A/nostruct-align/1cf3A.t2k-w0.5.mod (nostruct-align/1cf3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf3A/nostruct-align/1cf3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.574860 /projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod(21): Reading nostruct-align/1au1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod (nostruct-align/1au1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.112871 /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod(21): Reading nostruct-align/1gof.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28998/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod (nostruct-align/1gof.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.343840 /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod(22): Reading nostruct-align/1xdtR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod (nostruct-align/1xdtR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.025839 /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod(21): Reading nostruct-align/1goh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod (nostruct-align/1goh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.859858 /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod(21): Reading nostruct-align/1qpzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod (nostruct-align/1qpzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.090837 /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod(21): Reading nostruct-align/1dx5I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29066/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod (nostruct-align/1dx5I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.623837 /projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod(21): Reading nostruct-align/1g8fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-26808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod (nostruct-align/1g8fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.078854 /projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod(22): Reading nostruct-align/1ezfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4970/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod (nostruct-align/1ezfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.281828 /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod(22): Reading nostruct-align/1i0rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod (nostruct-align/1i0rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.329872 /projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod(21): Reading nostruct-align/2gwxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod (nostruct-align/2gwxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.301882 /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod(22): Reading nostruct-align/1gox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod (nostruct-align/1gox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.065865 /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod(21): Reading nostruct-align/8tlnE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-28672/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod (nostruct-align/8tlnE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.966873 /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod(21): Reading nostruct-align/2rhe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17631/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod (nostruct-align/2rhe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.060856 /projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod(21): Reading nostruct-align/1wwaX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32515/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod (nostruct-align/1wwaX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.152885 /projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod(21): Reading nostruct-align/1ektA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod (nostruct-align/1ektA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.497854 /projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod(22): Reading nostruct-align/1em2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod (nostruct-align/1em2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.703886 /projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod(21): Reading nostruct-align/1e8rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod (nostruct-align/1e8rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.032862 /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod(21): Reading nostruct-align/1gpb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-32372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod (nostruct-align/1gpb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.309881 /projects/compbio/experiments/models.97/pdb/1j/1j4aA/nostruct-align/1j4aA.t2k-w0.5.mod(22): Reading nostruct-align/1j4aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-16328/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j4aA/nostruct-align/1j4aA.t2k-w0.5.mod (nostruct-align/1j4aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j4aA/nostruct-align/1j4aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.478888 /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod(22): Reading nostruct-align/1gpc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29680/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod (nostruct-align/1gpc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.319851 /projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod(21): Reading nostruct-align/1f66C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31917/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod (nostruct-align/1f66C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.056856 /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod(21): Reading nostruct-align/1cf4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-32602/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod (nostruct-align/1cf4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.185879 /projects/compbio/experiments/models.97/pdb/1k/1k0gA/nostruct-align/1k0gA.t2k-w0.5.mod(22): Reading nostruct-align/1k0gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0gA/nostruct-align/1k0gA.t2k-w0.5.mod (nostruct-align/1k0gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0gA/nostruct-align/1k0gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.513838 /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod(22): Reading nostruct-align/4ubpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod (nostruct-align/4ubpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.699839 /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod(22): Reading nostruct-align/4ubpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod (nostruct-align/4ubpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.367865 /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod(22): Reading nostruct-align/4ubpC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod (nostruct-align/4ubpC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.998877 /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod(21): Reading nostruct-align/1gpl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod (nostruct-align/1gpl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.183846 /projects/compbio/experiments/models.97/pdb/1k/1kl1A/nostruct-align/1kl1A.t2k-w0.5.mod(22): Reading nostruct-align/1kl1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kl1A/nostruct-align/1kl1A.t2k-w0.5.mod (nostruct-align/1kl1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kl1A/nostruct-align/1kl1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.223875 /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod(22): Reading nostruct-align/1ezgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4075/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod (nostruct-align/1ezgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.729849 /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod(22): Reading nostruct-align/1gpr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod (nostruct-align/1gpr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.937847 /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod(21): Reading nostruct-align/1gps.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod (nostruct-align/1gps.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.161861 /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod(21): Reading nostruct-align/1gpt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17293/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod (nostruct-align/1gpt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.196846 /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod(22): Reading nostruct-align/1vcc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod (nostruct-align/1vcc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.905886 /projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod(22): Reading nostruct-align/1i21A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod (nostruct-align/1i21A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.830849 /projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod(21): Reading nostruct-align/1i0sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod (nostruct-align/1i0sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.330866 /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod(21): Reading nostruct-align/1qbhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod (nostruct-align/1qbhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.106850 /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod(22): Reading nostruct-align/1ja9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod (nostruct-align/1ja9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.735842 /projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod(21): Reading nostruct-align/1wwbX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod (nostruct-align/1wwbX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.250877 /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod(21): Reading nostruct-align/1alkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod (nostruct-align/1alkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.498850 /projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod(21): Reading nostruct-align/1pmlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-23137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod (nostruct-align/1pmlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.659887 /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod(21): Reading nostruct-align/1czsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod (nostruct-align/1czsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.606846 /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod(22): Reading nostruct-align/1mjhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod (nostruct-align/1mjhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.785881 /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k-w0.5.mod(22): Reading nostruct-align/1kyfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k-w0.5.mod (nostruct-align/1kyfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.151857 /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod(22): Reading nostruct-align/1mjhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod (nostruct-align/1mjhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.660879 /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod(21): Reading nostruct-align/1dx7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-10585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod (nostruct-align/1dx7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.782850 /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod(22): Reading nostruct-align/4pgaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod (nostruct-align/4pgaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.013849 /projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod(22): Reading nostruct-align/1hvbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2422/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod (nostruct-align/1hvbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.592846 /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod(21): Reading nostruct-align/1cdwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-32071/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod (nostruct-align/1cdwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.139881 /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod(22): Reading nostruct-align/1wwcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod (nostruct-align/1wwcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.591883 /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod(21): Reading nostruct-align/1ptvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod (nostruct-align/1ptvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.909855 /projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod(22): Reading nostruct-align/1fvnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1749/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod (nostruct-align/1fvnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.845865 /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod(21): Reading nostruct-align/1uwoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-1192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod (nostruct-align/1uwoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.860847 /projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod(22): Reading nostruct-align/1csjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-12435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod (nostruct-align/1csjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.867859 /projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod(21): Reading nostruct-align/1qbiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-4449/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod (nostruct-align/1qbiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.417875 /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod(21): Reading nostruct-align/1i16.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod (nostruct-align/1i16.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.074856 /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod(21): Reading nostruct-align/2cy3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-6136/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod (nostruct-align/2cy3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.991842 /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod(21): Reading nostruct-align/1cztA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod (nostruct-align/1cztA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.901873 /projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod(21): Reading nostruct-align/1e8tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-32004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod (nostruct-align/1e8tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.723831 /projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod(21): Reading nostruct-align/1qisA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod (nostruct-align/1qisA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.015886 /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod(22): Reading nostruct-align/1k0iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod (nostruct-align/1k0iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.383854 /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod(22): Reading nostruct-align/1grj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod (nostruct-align/1grj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.055880 /projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod(22): Reading nostruct-align/1foeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29846/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod (nostruct-align/1foeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.062843 /projects/compbio/experiments/models.97/pdb/1g/1gkkA/nostruct-align/1gkkA.t2k-w0.5.mod(22): Reading nostruct-align/1gkkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24051/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkkA/nostruct-align/1gkkA.t2k-w0.5.mod (nostruct-align/1gkkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkkA/nostruct-align/1gkkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.858871 /projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod(22): Reading nostruct-align/1g8iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod (nostruct-align/1g8iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.695829 /projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod(22): Reading nostruct-align/1eziA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod (nostruct-align/1eziA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.478882 /projects/compbio/experiments/models.97/pdb/1l/1l3yA/nostruct-align/1l3yA.t2k-w0.5.mod(22): Reading nostruct-align/1l3yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l3yA/nostruct-align/1l3yA.t2k-w0.5.mod (nostruct-align/1l3yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l3yA/nostruct-align/1l3yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.999828 /projects/compbio/experiments/models.97/pdb/1i/1ie5A/nostruct-align/1ie5A.t2k-w0.5.mod(22): Reading nostruct-align/1ie5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ie5A/nostruct-align/1ie5A.t2k-w0.5.mod (nostruct-align/1ie5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ie5A/nostruct-align/1ie5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.496864 /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod(21): Reading nostruct-align/1nubA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod (nostruct-align/1nubA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.819855 /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod(21): Reading nostruct-align/1cskA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod (nostruct-align/1cskA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.321836 /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod(22): Reading nostruct-align/1edmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod (nostruct-align/1edmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.484838 /projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod(21): Reading nostruct-align/1i0uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-4985/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod (nostruct-align/1i0uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.246851 /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod(21): Reading nostruct-align/1qbjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod (nostruct-align/1qbjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.363844 /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod(21): Reading nostruct-align/1grx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod (nostruct-align/1grx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.862881 /projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod(22): Reading nostruct-align/1e8uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod (nostruct-align/1e8uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.706839 /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod(22): Reading nostruct-align/1b5qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-29913/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod (nostruct-align/1b5qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.187840 /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod(22): Reading nostruct-align/1gsa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod (nostruct-align/1gsa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.825880 /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod(21): Reading nostruct-align/1i1b.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16803/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod (nostruct-align/1i1b.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.847885 /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod(21): Reading nostruct-align/1cf7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19859/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod (nostruct-align/1cf7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.940882 /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod(22): Reading nostruct-align/1cf7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod (nostruct-align/1cf7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.625830 /projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod(21): Reading nostruct-align/4cms.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod (nostruct-align/4cms.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.331854 /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod(21): Reading nostruct-align/1rtm1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod (nostruct-align/1rtm1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.227884 /projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod(21): Reading nostruct-align/1fofA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod (nostruct-align/1fofA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.488874 /projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod(22): Reading nostruct-align/1gklA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26255/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod (nostruct-align/1gklA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.227880 /projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod(21): Reading nostruct-align/1g8jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-13960/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod (nostruct-align/1g8jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.774870 /projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod(22): Reading nostruct-align/1ezjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod (nostruct-align/1ezjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.477869 /projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod(21): Reading nostruct-align/1g8jB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod (nostruct-align/1g8jB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.769884 /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod(22): Reading nostruct-align/1k92A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod (nostruct-align/1k92A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.294865 /projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod(22): Reading nostruct-align/1whsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23887/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod (nostruct-align/1whsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.139833 /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod(21): Reading nostruct-align/2cyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-9615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod (nostruct-align/2cyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.944849 /projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod(22): Reading nostruct-align/1whsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-21699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod (nostruct-align/1whsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.178871 /projects/compbio/experiments/models.97/pdb/1i/1icxA/nostruct-align/1icxA.t2k-w0.5.mod(22): Reading nostruct-align/1icxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icxA/nostruct-align/1icxA.t2k-w0.5.mod (nostruct-align/1icxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icxA/nostruct-align/1icxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.916851 /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod(22): Reading nostruct-align/1i0vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod (nostruct-align/1i0vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.860880 /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod(22): Reading nostruct-align/1qbkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-28001/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod (nostruct-align/1qbkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.952850 /projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod(21): Reading nostruct-align/1dorA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4856/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod (nostruct-align/1dorA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.273838 /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod(21): Reading nostruct-align/2kaiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-30674/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod (nostruct-align/2kaiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.735861 /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod(21): Reading nostruct-align/1bhtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-23129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod (nostruct-align/1bhtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.020836 /projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod(21): Reading nostruct-align/1hi0P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod (nostruct-align/1hi0P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.831846 /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod(21): Reading nostruct-align/1qk3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod (nostruct-align/1qk3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.429878 /projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod(22): Reading nostruct-align/1jggA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod (nostruct-align/1jggA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.675852 /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod(21): Reading nostruct-align/1cdzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod (nostruct-align/1cdzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.552866 /projects/compbio/experiments/models.97/pdb/1k/1kcmA/nostruct-align/1kcmA.t2k-w0.5.mod(22): Reading nostruct-align/1kcmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-28688/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcmA/nostruct-align/1kcmA.t2k-w0.5.mod (nostruct-align/1kcmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcmA/nostruct-align/1kcmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.991888 /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod(21): Reading nostruct-align/1ttbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod (nostruct-align/1ttbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.414871 /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod(21): Reading nostruct-align/1obwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod (nostruct-align/1obwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.492830 /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod(21): Reading nostruct-align/2rn2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-17511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod (nostruct-align/2rn2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.406878 /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod(22): Reading nostruct-align/1gkmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod (nostruct-align/1gkmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.907866 /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod(22): Reading nostruct-align/1kjwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18509/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod (nostruct-align/1kjwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.807878 /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod(22): Reading nostruct-align/1g8kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-7213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod (nostruct-align/1g8kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.346876 /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod(21): Reading nostruct-align/1g8kB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-24967/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod (nostruct-align/1g8kB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.422886 /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod(22): Reading nostruct-align/1whtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31472/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod (nostruct-align/1whtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.983841 /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod(22): Reading nostruct-align/1whtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod (nostruct-align/1whtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.288868 /projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod(21): Reading nostruct-align/1edoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod (nostruct-align/1edoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.714849 /projects/compbio/experiments/models.97/pdb/1i/1icyA/nostruct-align/1icyA.t2k-w0.5.mod(22): Reading nostruct-align/1icyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-11834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icyA/nostruct-align/1icyA.t2k-w0.5.mod (nostruct-align/1icyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1icyA/nostruct-align/1icyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.708870 /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod(22): Reading nostruct-align/1jw9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16795/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod (nostruct-align/1jw9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.714838 /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod(21): Reading nostruct-align/1csmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2179/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod (nostruct-align/1csmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.843857 /projects/compbio/experiments/models.97/pdb/1g/1grwA/nostruct-align/1grwA.t2k-w0.5.mod(22): Reading nostruct-align/1grwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1grwA/nostruct-align/1grwA.t2k-w0.5.mod (nostruct-align/1grwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1grwA/nostruct-align/1grwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.987835 /projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod(21): Reading nostruct-align/1i25A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod (nostruct-align/1i25A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.914856 /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22): Reading nostruct-align/1dosA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod (nostruct-align/1dosA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.817881 /projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod(21): Reading nostruct-align/1vgh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod (nostruct-align/1vgh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.405888 /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod(22): Reading nostruct-align/1b71A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod (nostruct-align/1b71A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.166853 /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod(21): Reading nostruct-align/1qk4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21230/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod (nostruct-align/1qk4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.331875 /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod(21): Reading nostruct-align/1cf9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod (nostruct-align/1cf9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.812868 /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod(21): Reading nostruct-align/1asyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod (nostruct-align/1asyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.097832 /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod(21): Reading nostruct-align/1au7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-14328/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod (nostruct-align/1au7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.501869 /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod(22): Reading nostruct-align/1c1yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11509/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod (nostruct-align/1c1yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.770847 /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod(22): Reading nostruct-align/1fohA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod (nostruct-align/1fohA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.122877 /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod(22): Reading nostruct-align/1jnrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-31242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod (nostruct-align/1jnrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.508850 /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod(22): Reading nostruct-align/1jnrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod (nostruct-align/1jnrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.311838 /projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod(22): Reading nostruct-align/1g8lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod (nostruct-align/1g8lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.458864 /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod(22): Reading nostruct-align/1k94A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod (nostruct-align/1k94A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.338840 /projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod(21): Reading nostruct-align/1hi2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod (nostruct-align/1hi2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.527868 /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod(22): Reading nostruct-align/1h4rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod (nostruct-align/1h4rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.205864 /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod(21): Reading nostruct-align/7fd1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod (nostruct-align/7fd1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.747875 /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod(21): Reading nostruct-align/1gw4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod (nostruct-align/1gw4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.682869 /projects/compbio/experiments/models.97/pdb/1i/1i26A/nostruct-align/1i26A.t2k-w0.5.mod(22): Reading nostruct-align/1i26A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i26A/nostruct-align/1i26A.t2k-w0.5.mod (nostruct-align/1i26A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i26A/nostruct-align/1i26A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.695871 /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod(22): Reading nostruct-align/1vhh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4096/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod (nostruct-align/1vhh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.414835 /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod(22): Reading nostruct-align/1spuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod (nostruct-align/1spuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.770878 /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod(21): Reading nostruct-align/1a9nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20059/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod (nostruct-align/1a9nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.265852 /projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod(21): Reading nostruct-align/1ekzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2960/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod (nostruct-align/1ekzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.110867 /projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod(21): Reading nostruct-align/1e8xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-32507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod (nostruct-align/1e8xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.652863 /projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod(22): Reading nostruct-align/9ldtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-29156/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod (nostruct-align/9ldtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.233858 /projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod(22): Reading nostruct-align/1i8aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod (nostruct-align/1i8aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.092836 /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod(21): Reading nostruct-align/1bj4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22752/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod (nostruct-align/1bj4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.754883 /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod(22): Reading nostruct-align/1b5tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod (nostruct-align/1b5tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.924835 /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod(21): Reading nostruct-align/1b72A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14379/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod (nostruct-align/1b72A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.597828 /projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod(21): Reading nostruct-align/1b72B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod (nostruct-align/1b72B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.934830 /projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod(22): Reading nostruct-align/1gdeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod (nostruct-align/1gdeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.994879 /projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod(22): Reading nostruct-align/1g1cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-23034/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod (nostruct-align/1g1cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.071846 /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod(21): Reading nostruct-align/1aszB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-9707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod (nostruct-align/1aszB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.121845 /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod(22): Reading nostruct-align/1k0mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24536/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod (nostruct-align/1k0mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.874865 /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod(21): Reading nostruct-align/1daaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod (nostruct-align/1daaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.607874 /projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod(21): Reading nostruct-align/4cpv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod (nostruct-align/4cpv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.507868 /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod(21): Reading nostruct-align/1cleA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-19218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod (nostruct-align/1cleA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.165840 /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod(22): Reading nostruct-align/1g8mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod (nostruct-align/1g8mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.618879 /projects/compbio/experiments/models.97/pdb/1k/1kl7A/nostruct-align/1kl7A.t2k-w0.5.mod(22): Reading nostruct-align/1kl7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3590/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kl7A/nostruct-align/1kl7A.t2k-w0.5.mod (nostruct-align/1kl7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kl7A/nostruct-align/1kl7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.518881 /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod(22): Reading nostruct-align/1gvp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod (nostruct-align/1gvp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.876839 /projects/compbio/experiments/models.97/pdb/1k/1kjyB/nostruct-align/1kjyB.t2k-w0.5.mod(22): Reading nostruct-align/1kjyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjyB/nostruct-align/1kjyB.t2k-w0.5.mod (nostruct-align/1kjyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kjyB/nostruct-align/1kjyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.181883 /projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod(22): Reading nostruct-align/1k7wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod (nostruct-align/1k7wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.663839 /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod(22): Reading nostruct-align/6cel.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod (nostruct-align/6cel.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.439838 /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod(21): Reading nostruct-align/1dhkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod (nostruct-align/1dhkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.148876 /projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod(22): Reading nostruct-align/1h61A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod (nostruct-align/1h61A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.612881 /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod(22): Reading nostruct-align/1vib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod (nostruct-align/1vib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.564877 /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod(21): Reading nostruct-align/1edqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-7169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod (nostruct-align/1edqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.828833 /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod(21): Reading nostruct-align/1ie9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod (nostruct-align/1ie9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.853842 /projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod(21): Reading nostruct-align/1e1oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod (nostruct-align/1e1oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.913857 /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod(22): Reading nostruct-align/1vid.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod (nostruct-align/1vid.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.477888 /projects/compbio/experiments/models.97/pdb/1g/1gryA/nostruct-align/1gryA.t2k-w0.5.mod(22): Reading nostruct-align/1gryA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-11551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gryA/nostruct-align/1gryA.t2k-w0.5.mod (nostruct-align/1gryA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gryA/nostruct-align/1gryA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.246845 /projects/compbio/experiments/models.97/pdb/1g/1gt7A/nostruct-align/1gt7A.t2k-w0.5.mod(22): Reading nostruct-align/1gt7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-9397/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt7A/nostruct-align/1gt7A.t2k-w0.5.mod (nostruct-align/1gt7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt7A/nostruct-align/1gt7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.948877 /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod(22): Reading nostruct-align/1vie.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod (nostruct-align/1vie.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.711834 /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod(22): Reading nostruct-align/1i27A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod (nostruct-align/1i27A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.034838 /projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod(22): Reading nostruct-align/1vif.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8771/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod (nostruct-align/1vif.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.711834 /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod(21): Reading nostruct-align/1vig.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod (nostruct-align/1vig.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.236883 /projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod(22): Reading nostruct-align/1dq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod (nostruct-align/1dq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.347841 /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod(21): Reading nostruct-align/1vih.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod (nostruct-align/1vih.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.236883 /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod(21): Reading nostruct-align/1vii.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-6406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod (nostruct-align/1vii.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.701874 /projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod(22): Reading nostruct-align/1em9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod (nostruct-align/1em9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.887836 /projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod(22): Reading nostruct-align/1czyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod (nostruct-align/1czyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.276836 /projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod(22): Reading nostruct-align/1e8yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod (nostruct-align/1e8yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.697889 /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod(22): Reading nostruct-align/1vin.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod (nostruct-align/1vin.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.924881 /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod(21): Reading nostruct-align/1b73A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7539/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod (nostruct-align/1b73A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.641830 /projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod(21): Reading nostruct-align/1czyC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod (nostruct-align/1czyC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.096846 /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod(21): Reading nostruct-align/1qk6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-29228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod (nostruct-align/1qk6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.522869 /projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod(21): Reading nostruct-align/1jgjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-25830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod (nostruct-align/1jgjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.060844 /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod(21): Reading nostruct-align/1nftA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-17496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod (nostruct-align/1nftA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.752840 /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod(22): Reading nostruct-align/3nul.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod (nostruct-align/3nul.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.360855 /projects/compbio/experiments/models.97/pdb/1k/1k0nA/nostruct-align/1k0nA.t2k-w0.5.mod(22): Reading nostruct-align/1k0nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0nA/nostruct-align/1k0nA.t2k-w0.5.mod (nostruct-align/1k0nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0nA/nostruct-align/1k0nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.127886 /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod(22): Reading nostruct-align/1dabA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod (nostruct-align/1dabA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.743883 /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod(21): Reading nostruct-align/1xsoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod (nostruct-align/1xsoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.244831 /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k-w0.5.mod(22): Reading nostruct-align/1gkpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k-w0.5.mod (nostruct-align/1gkpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.606884 /projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod(21): Reading nostruct-align/3bdpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-28724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod (nostruct-align/3bdpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.205881 /projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod(22): Reading nostruct-align/1hgvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod (nostruct-align/1hgvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.727833 /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod(22): Reading nostruct-align/1fx2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13140/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod (nostruct-align/1fx2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.091885 /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod(22): Reading nostruct-align/1pfiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2984/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod (nostruct-align/1pfiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.150883 /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod(21): Reading nostruct-align/5cytR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod (nostruct-align/5cytR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.972885 /projects/compbio/experiments/models.97/pdb/1g/1gt8A/nostruct-align/1gt8A.t2k-w0.5.mod(22): Reading nostruct-align/1gt8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt8A/nostruct-align/1gt8A.t2k-w0.5.mod (nostruct-align/1gt8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt8A/nostruct-align/1gt8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.255856 /projects/compbio/experiments/models.97/pdb/1g/1gt8B/nostruct-align/1gt8B.t2k-w0.5.mod(22): Reading nostruct-align/1gt8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-4093/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt8B/nostruct-align/1gt8B.t2k-w0.5.mod (nostruct-align/1gt8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt8B/nostruct-align/1gt8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.570864 /projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod(22): Reading nostruct-align/1fb6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod (nostruct-align/1fb6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.771885 /projects/compbio/experiments/models.97/pdb/1g/1gt8C/nostruct-align/1gt8C.t2k-w0.5.mod(22): Reading nostruct-align/1gt8C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-18492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt8C/nostruct-align/1gt8C.t2k-w0.5.mod (nostruct-align/1gt8C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt8C/nostruct-align/1gt8C.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.898878 /projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod(21): Reading nostruct-align/1dovA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod (nostruct-align/1dovA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.088835 /projects/compbio/experiments/models.97/pdb/1g/1gt8D/nostruct-align/1gt8D.t2k-w0.5.mod(22): Reading nostruct-align/1gt8D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-31821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt8D/nostruct-align/1gt8D.t2k-w0.5.mod (nostruct-align/1gt8D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt8D/nostruct-align/1gt8D.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.347889 /projects/compbio/experiments/models.97/pdb/1g/1gzcA/nostruct-align/1gzcA.t2k-w0.5.mod(22): Reading nostruct-align/1gzcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gzcA/nostruct-align/1gzcA.t2k-w0.5.mod (nostruct-align/1gzcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gzcA/nostruct-align/1gzcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.708887 /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod(22): Reading nostruct-align/1mjoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod (nostruct-align/1mjoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.640867 /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod(22): Reading nostruct-align/1b74A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod (nostruct-align/1b74A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.618856 /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod(21): Reading nostruct-align/1qk7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20710/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod (nostruct-align/1qk7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.744865 /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod(21): Reading nostruct-align/1vjs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-11445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod (nostruct-align/1vjs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.555851 /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod(22): Reading nostruct-align/1kcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod (nostruct-align/1kcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.827864 /projects/compbio/experiments/models.97/pdb/1g/1gt91/nostruct-align/1gt91.t2k-w0.5.mod(22): Reading nostruct-align/1gt91.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gt91/nostruct-align/1gt91.t2k-w0.5.mod (nostruct-align/1gt91.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gt91/nostruct-align/1gt91.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.964842 /projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod(21): Reading nostruct-align/1g1eB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod (nostruct-align/1g1eB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.721853 /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod(21): Reading nostruct-align/1vjw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod (nostruct-align/1vjw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.616861 /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod(21): Reading nostruct-align/1fokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod (nostruct-align/1fokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.134871 /projects/compbio/experiments/models.97/pdb/1j/1jnuA/nostruct-align/1jnuA.t2k-w0.5.mod(22): Reading nostruct-align/1jnuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnuA/nostruct-align/1jnuA.t2k-w0.5.mod (nostruct-align/1jnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jnuA/nostruct-align/1jnuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.507833 /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod(22): Reading nostruct-align/1oaa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15050/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod (nostruct-align/1oaa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.738861 /projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod(22): Reading nostruct-align/1jp3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod (nostruct-align/1jp3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.215864 /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod(21): Reading nostruct-align/2eboA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod (nostruct-align/2eboA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.616858 /projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod(22): Reading nostruct-align/1kl9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod (nostruct-align/1kl9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.918856 /projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod(21): Reading nostruct-align/1g8oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-6454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod (nostruct-align/1g8oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.921848 /projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod(21): Reading nostruct-align/1h4uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod (nostruct-align/1h4uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.115866 /projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod(22): Reading nostruct-align/1fx3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod (nostruct-align/1fx3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.894836 /projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod(21): Reading nostruct-align/1fvuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6964/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod (nostruct-align/1fvuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.362877 /projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod(21): Reading nostruct-align/1fx3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod (nostruct-align/1fx3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.102859 /projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod(21): Reading nostruct-align/1fvuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-21266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod (nostruct-align/1fvuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.044884 /projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod(21): Reading nostruct-align/1edsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-16396/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod (nostruct-align/1edsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.930845 /projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod(22): Reading nostruct-align/1ef1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20345/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod (nostruct-align/1ef1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.814842 /projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod(22): Reading nostruct-align/1ef1C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod (nostruct-align/1ef1C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.750851 /projects/compbio/experiments/models.97/pdb/1m/1m0dA/nostruct-align/1m0dA.t2k-w0.5.mod(22): Reading nostruct-align/1m0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1m0dA/nostruct-align/1m0dA.t2k-w0.5.mod (nostruct-align/1m0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1m0dA/nostruct-align/1m0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.263866 /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod(22): Reading nostruct-align/1dowA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod (nostruct-align/1dowA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.516874 /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod(22): Reading nostruct-align/1dowB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod (nostruct-align/1dowB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.953829 /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod(21): Reading nostruct-align/1yacA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28287/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod (nostruct-align/1yacA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.892830 /projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod(21): Reading nostruct-align/1e1qG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22709/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod (nostruct-align/1e1qG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.469854 /projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod(21): Reading nostruct-align/1tetH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-12572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod (nostruct-align/1tetH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.967878 /projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod(22): Reading nostruct-align/1i8dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod (nostruct-align/1i8dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.244871 /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod(21): Reading nostruct-align/1tetL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-7844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod (nostruct-align/1tetL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.903839 /projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod(21): Reading nostruct-align/1qk8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod (nostruct-align/1qk8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.378830 /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod(21): Reading nostruct-align/1gya.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod (nostruct-align/1gya.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.670874 /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod(21): Reading nostruct-align/1gdhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23743/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod (nostruct-align/1gdhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.542847 /projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod(21): Reading nostruct-align/1esfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-10691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod (nostruct-align/1esfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.092854 /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod(22): Reading nostruct-align/1jp4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod (nostruct-align/1jp4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.693851 /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod(22): Reading nostruct-align/2trcP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod (nostruct-align/2trcP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.442854 /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod(21): Reading nostruct-align/1c9fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod (nostruct-align/1c9fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.427887 /projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod(22): Reading nostruct-align/1g8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8913/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod (nostruct-align/1g8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.971863 /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod(21): Reading nostruct-align/1hgxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-30809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod (nostruct-align/1hgxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.370876 /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod(21): Reading nostruct-align/1pfkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod (nostruct-align/1pfkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.150883 /projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod(22): Reading nostruct-align/1h4vB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod (nostruct-align/1h4vB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.956871 /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod(22): Reading nostruct-align/1e30A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19156/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod (nostruct-align/1e30A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.943882 /projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod(22): Reading nostruct-align/1qbqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod (nostruct-align/1qbqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.221849 /projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod(21): Reading nostruct-align/1obr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5278/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod (nostruct-align/1obr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.595877 /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod(21): Reading nostruct-align/1an2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod (nostruct-align/1an2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.305841 /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod(22): Reading nostruct-align/4dpvZ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod (nostruct-align/4dpvZ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.388847 /projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod(22): Reading nostruct-align/1kyoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod (nostruct-align/1kyoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.349880 /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod(21): Reading nostruct-align/1qk9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod (nostruct-align/1qk9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.516878 /projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod(22): Reading nostruct-align/1f5aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6633/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod (nostruct-align/1f5aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.145847 /projects/compbio/experiments/models.97/pdb/1k/1kyoC/nostruct-align/1kyoC.t2k-w0.5.mod(22): Reading nostruct-align/1kyoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19144/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyoC/nostruct-align/1kyoC.t2k-w0.5.mod (nostruct-align/1kyoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kyoC/nostruct-align/1kyoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.115864 /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod(21): Reading nostruct-align/5nn9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-27704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod (nostruct-align/5nn9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.191851 /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod(22): Reading nostruct-align/1vls.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod (nostruct-align/1vls.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.970831 /projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod(21): Reading nostruct-align/1esgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7712/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod (nostruct-align/1esgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.437874 /projects/compbio/experiments/models.97/pdb/1k/1kyoG/nostruct-align/1kyoG.t2k-w0.5.mod(22): Reading nostruct-align/1kyoG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-4404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyoG/nostruct-align/1kyoG.t2k-w0.5.mod (nostruct-align/1kyoG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kyoG/nostruct-align/1kyoG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.185844 /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod(22): Reading nostruct-align/1irqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod (nostruct-align/1irqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.171858 /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod(22): Reading nostruct-align/1wapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod (nostruct-align/1wapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.232889 /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod(22): Reading nostruct-align/1cliA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod (nostruct-align/1cliA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.374882 /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod(22): Reading nostruct-align/1g8qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod (nostruct-align/1g8qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.928867 /projects/compbio/experiments/models.97/pdb/1k/1k99A/nostruct-align/1k99A.t2k-w0.5.mod(22): Reading nostruct-align/1k99A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k99A/nostruct-align/1k99A.t2k-w0.5.mod (nostruct-align/1k99A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k99A/nostruct-align/1k99A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.332840 /projects/compbio/experiments/models.97/pdb/1d/1d5mB/nostruct-align/1d5mB.t2k-w0.5.mod(22): Reading nostruct-align/1d5mB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-1273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5mB/nostruct-align/1d5mB.t2k-w0.5.mod (nostruct-align/1d5mB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5mB/nostruct-align/1d5mB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.608839 /projects/compbio/experiments/models.97/pdb/1d/1d5mC/nostruct-align/1d5mC.t2k-w0.5.mod(22): Reading nostruct-align/1d5mC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5mC/nostruct-align/1d5mC.t2k-w0.5.mod (nostruct-align/1d5mC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5mC/nostruct-align/1d5mC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.738857 /projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod(22): Reading nostruct-align/1h4wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod (nostruct-align/1h4wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.666855 /projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod(22): Reading nostruct-align/1h65A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod (nostruct-align/1h65A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.203886 /projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod(22): Reading nostruct-align/1eduA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1219/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod (nostruct-align/1eduA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.458843 /projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod(22): Reading nostruct-align/2madH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-25639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod (nostruct-align/2madH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.877888 /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod(22): Reading nostruct-align/3chbD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod (nostruct-align/3chbD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.140844 /projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod(22): Reading nostruct-align/1i8fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod (nostruct-align/1i8fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.312857 /projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod(22): Reading nostruct-align/1kypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod (nostruct-align/1kypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.957874 /projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod(21): Reading nostruct-align/1fhdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod (nostruct-align/1fhdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.639839 /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod(22): Reading nostruct-align/1b77A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod (nostruct-align/1b77A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.417885 /projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod(22): Reading nostruct-align/1k0rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-20021/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod (nostruct-align/1k0rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.529854 /projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod(22): Reading nostruct-align/1k20A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod (nostruct-align/1k20A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.313841 /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod(22): Reading nostruct-align/1qqeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod (nostruct-align/1qqeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.886881 /projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod(21): Reading nostruct-align/1fonA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod (nostruct-align/1fonA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.307842 /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod(21): Reading nostruct-align/1dhpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-9189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod (nostruct-align/1dhpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.351873 /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod(21): Reading nostruct-align/1d5nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24794/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod (nostruct-align/1d5nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.850880 /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod(22): Reading nostruct-align/1h4xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod (nostruct-align/1h4xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.497837 /projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod(21): Reading nostruct-align/1edvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-14025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod (nostruct-align/1edvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.087879 /projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod(21): Reading nostruct-align/1ef4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod (nostruct-align/1ef4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.928869 /projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod(21): Reading nostruct-align/1vnc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod (nostruct-align/1vnc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.524834 /projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod(21): Reading nostruct-align/1e32A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-25894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod (nostruct-align/1e32A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.557846 /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod(22): Reading nostruct-align/1nukA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod (nostruct-align/1nukA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.962856 /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod(22): Reading nostruct-align/3inkC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod (nostruct-align/3inkC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.953844 /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod(22): Reading nostruct-align/1qd1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22340/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod (nostruct-align/1qd1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.546865 /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod(22): Reading nostruct-align/1dozA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod (nostruct-align/1dozA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.567862 /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod(22): Reading nostruct-align/1b0b.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod (nostruct-align/1b0b.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.472866 /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod(21): Reading nostruct-align/1an4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod (nostruct-align/1an4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.248833 /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod(21): Reading nostruct-align/1alvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-6165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod (nostruct-align/1alvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.032860 /projects/compbio/experiments/models.97/pdb/1g/1gzgA/nostruct-align/1gzgA.t2k-w0.5.mod(22): Reading nostruct-align/1gzgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gzgA/nostruct-align/1gzgA.t2k-w0.5.mod (nostruct-align/1gzgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gzgA/nostruct-align/1gzgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.078856 /projects/compbio/experiments/models.97/pdb/1k/1kyqA/nostruct-align/1kyqA.t2k-w0.5.mod(22): Reading nostruct-align/1kyqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-2184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyqA/nostruct-align/1kyqA.t2k-w0.5.mod (nostruct-align/1kyqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kyqA/nostruct-align/1kyqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.841837 /projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod(22): Reading nostruct-align/1jnxX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod (nostruct-align/1jnxX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.903830 /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod(22): Reading nostruct-align/1b78A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-19727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod (nostruct-align/1b78A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.718866 /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod(22): Reading nostruct-align/1vns.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod (nostruct-align/1vns.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.629831 /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod(21): Reading nostruct-align/1rfbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod (nostruct-align/1rfbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.185881 /projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod(22): Reading nostruct-align/1g1iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod (nostruct-align/1g1iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.581835 /projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod(21): Reading nostruct-align/1esiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25262/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod (nostruct-align/1esiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.912853 /projects/compbio/experiments/models.97/pdb/1k/1k0sA/nostruct-align/1k0sA.t2k-w0.5.mod(22): Reading nostruct-align/1k0sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17325/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0sA/nostruct-align/1k0sA.t2k-w0.5.mod (nostruct-align/1k0sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0sA/nostruct-align/1k0sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.670832 /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod(21): Reading nostruct-align/1irsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod (nostruct-align/1irsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.533863 /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod(22): Reading nostruct-align/1qqfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod (nostruct-align/1qqfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.842888 /projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod(22): Reading nostruct-align/1jnyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod (nostruct-align/1jnyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.597834 /projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod(22): Reading nostruct-align/1vp9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-29714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod (nostruct-align/1vp9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.264856 /projects/compbio/experiments/models.97/pdb/1g/1gkuB/nostruct-align/1gkuB.t2k-w0.5.mod(22): Reading nostruct-align/1gkuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkuB/nostruct-align/1gkuB.t2k-w0.5.mod (nostruct-align/1gkuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkuB/nostruct-align/1gkuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.354851 /projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod(21): Reading nostruct-align/1oef.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod (nostruct-align/1oef.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.202866 /projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod(22): Reading nostruct-align/1hi9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod (nostruct-align/1hi9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.533863 /projects/compbio/experiments/models.97/pdb/1h/1h67A/nostruct-align/1h67A.t2k-w0.5.mod(22): Reading nostruct-align/1h67A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2698/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h67A/nostruct-align/1h67A.t2k-w0.5.mod (nostruct-align/1h67A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h67A/nostruct-align/1h67A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.083838 /projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod(21): Reading nostruct-align/1fvyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod (nostruct-align/1fvyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.670864 /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod(21): Reading nostruct-align/1nulA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26045/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod (nostruct-align/1nulA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.654856 /projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod(22): Reading nostruct-align/1oen.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-5317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod (nostruct-align/1oen.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.812885 /projects/compbio/experiments/models.97/pdb/1k/1krhA/nostruct-align/1krhA.t2k-w0.5.mod(22): Reading nostruct-align/1krhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20752/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krhA/nostruct-align/1krhA.t2k-w0.5.mod (nostruct-align/1krhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1krhA/nostruct-align/1krhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.485884 /projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod(21): Reading nostruct-align/1b1a.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod (nostruct-align/1b1a.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.477837 /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod(21): Reading nostruct-align/1yagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod (nostruct-align/1yagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.410841 /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod(21): Reading nostruct-align/1vom.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod (nostruct-align/1vom.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.644865 /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod(21): Reading nostruct-align/1yagG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-3371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod (nostruct-align/1yagG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.435839 /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod(22): Reading nostruct-align/1b79A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod (nostruct-align/1b79A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.116846 /projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod(22): Reading nostruct-align/1j4nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod (nostruct-align/1j4nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.588869 /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod(21): Reading nostruct-align/3pbgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-29108/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod (nostruct-align/3pbgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.868885 /projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod(22): Reading nostruct-align/1g1jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod (nostruct-align/1g1jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.581835 /projects/compbio/experiments/models.97/pdb/1k/1k0tA/nostruct-align/1k0tA.t2k-w0.5.mod(22): Reading nostruct-align/1k0tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0tA/nostruct-align/1k0tA.t2k-w0.5.mod (nostruct-align/1k0tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k0tA/nostruct-align/1k0tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.178829 /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod(22): Reading nostruct-align/1it2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod (nostruct-align/1it2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.538881 /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod(22): Reading nostruct-align/1qqgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod (nostruct-align/1qqgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.257868 /projects/compbio/experiments/models.97/pdb/1k/1kcvH/nostruct-align/1kcvH.t2k-w0.5.mod(22): Reading nostruct-align/1kcvH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-17608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcvH/nostruct-align/1kcvH.t2k-w0.5.mod (nostruct-align/1kcvH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcvH/nostruct-align/1kcvH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.418865 /projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod(21): Reading nostruct-align/1g8tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod (nostruct-align/1g8tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864855 /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod(22): Reading nostruct-align/1dj0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod (nostruct-align/1dj0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.519842 /projects/compbio/experiments/models.97/pdb/1k/1kcvL/nostruct-align/1kcvL.t2k-w0.5.mod(22): Reading nostruct-align/1kcvL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcvL/nostruct-align/1kcvL.t2k-w0.5.mod (nostruct-align/1kcvL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcvL/nostruct-align/1kcvL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.664883 /projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod(22): Reading nostruct-align/1h68A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod (nostruct-align/1h68A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.347845 /projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod(22): Reading nostruct-align/1fx8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16384/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod (nostruct-align/1fx8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.762875 /projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod(22): Reading nostruct-align/1fvzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod (nostruct-align/1fvzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.090849 /projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod(21): Reading nostruct-align/1edxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod (nostruct-align/1edxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.262844 /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod(21): Reading nostruct-align/1vpc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-5374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod (nostruct-align/1vpc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.596863 /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod(21): Reading nostruct-align/1idaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27046/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod (nostruct-align/1idaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.934866 /projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod(21): Reading nostruct-align/1b00A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod (nostruct-align/1b00A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.568853 /projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod(21): Reading nostruct-align/1vpi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod (nostruct-align/1vpi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.494881 /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod(21): Reading nostruct-align/1ofv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod (nostruct-align/1ofv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.758860 /projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod(21): Reading nostruct-align/1fhgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28522/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod (nostruct-align/1fhgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.348845 /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod(22): Reading nostruct-align/3grs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-27423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod (nostruct-align/3grs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.707865 /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod(21): Reading nostruct-align/1c2aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod (nostruct-align/1c2aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.291834 /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod(22): Reading nostruct-align/1vpt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-23182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod (nostruct-align/1vpt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.554878 /projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod(21): Reading nostruct-align/1g1kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-2436/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod (nostruct-align/1g1kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.391888 /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod(21): Reading nostruct-align/1vpu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod (nostruct-align/1vpu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.874853 /projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod(21): Reading nostruct-align/3grx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod (nostruct-align/3grx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.458883 /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod(22): Reading nostruct-align/1qqhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod (nostruct-align/1qqhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.758831 /projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod(21): Reading nostruct-align/1gm5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15502/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod (nostruct-align/1gm5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.912888 /projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod(22): Reading nostruct-align/1c9kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25667/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod (nostruct-align/1c9kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.694881 /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod(21): Reading nostruct-align/1c9kB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-7335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod (nostruct-align/1c9kB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.235840 /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod(21): Reading nostruct-align/1vqb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod (nostruct-align/1vqb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.078880 /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod(21): Reading nostruct-align/1yaiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod (nostruct-align/1yaiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.449873 /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod(21): Reading nostruct-align/1an7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18508/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod (nostruct-align/1an7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.222828 /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading nostruct-align/2dubE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod . Average NLL-Simple NULL score: -37.116837 /projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod(21): Reading nostruct-align/1i8jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24345/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod (nostruct-align/1i8jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.423849 /projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod(21): Reading nostruct-align/1f5fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26072/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod (nostruct-align/1f5fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.307844 /projects/compbio/experiments/models.97/pdb/1l/1lw8A/nostruct-align/1lw8A.t2k-w0.5.mod(22): Reading nostruct-align/1lw8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lw8A/nostruct-align/1lw8A.t2k-w0.5.mod (nostruct-align/1lw8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lw8A/nostruct-align/1lw8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.800831 /projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod(22): Reading nostruct-align/1k24A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20098/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod (nostruct-align/1k24A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.491854 /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod(21): Reading nostruct-align/2tysA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28178/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod (nostruct-align/2tysA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.778845 /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod(22): Reading nostruct-align/2tysB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-19483/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod (nostruct-align/2tysB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.975838 /projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod(21): Reading nostruct-align/1fq0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod (nostruct-align/1fq0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.981853 /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod(21): Reading nostruct-align/1b54.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-6947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod (nostruct-align/1b54.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.964853 /projects/compbio/experiments/models.97/pdb/1g/1gm6A/nostruct-align/1gm6A.t2k-w0.5.mod(22): Reading nostruct-align/1gm6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm6A/nostruct-align/1gm6A.t2k-w0.5.mod (nostruct-align/1gm6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gm6A/nostruct-align/1gm6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.522839 /projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod(21): Reading nostruct-align/1gkxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-11791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod (nostruct-align/1gkxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.645830 /projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod(22): Reading nostruct-align/21bi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod (nostruct-align/21bi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.884884 /projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod(22): Reading nostruct-align/1ezvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16249/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod (nostruct-align/1ezvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.065842 /projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod(22): Reading nostruct-align/1ezvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod (nostruct-align/1ezvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.028864 /projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod(22): Reading nostruct-align/1ezvC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-22431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod (nostruct-align/1ezvC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.105846 /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod(22): Reading nostruct-align/1d5rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod (nostruct-align/1d5rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.437845 /projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod(22): Reading nostruct-align/1ezvD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28946/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod (nostruct-align/1ezvD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.697882 /projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod(22): Reading nostruct-align/1ezvF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod (nostruct-align/1ezvF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.281828 /projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod(21): Reading nostruct-align/1edzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod (nostruct-align/1edzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.206865 /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading nostruct-align/1ef8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -37.779842 /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod(21): Reading nostruct-align/1forL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-17507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod (nostruct-align/1forL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.230879 /projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod(22): Reading nostruct-align/1ezvG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod (nostruct-align/1ezvG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.087856 /projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod(22): Reading nostruct-align/1ezvH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6072/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod (nostruct-align/1ezvH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.481882 /projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod(22): Reading nostruct-align/1ezvI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod (nostruct-align/1ezvI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.704840 /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod(21): Reading nostruct-align/1qd5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-23703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod (nostruct-align/1qd5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.365877 /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod(22): Reading nostruct-align/3ullA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10254/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod (nostruct-align/3ullA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.159830 /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod(21): Reading nostruct-align/5p21.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-22545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod (nostruct-align/5p21.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.425835 /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod(21): Reading nostruct-align/2kauA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod (nostruct-align/2kauA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.506840 /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod(21): Reading nostruct-align/1a9xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-26958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod (nostruct-align/1a9xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.377836 /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod(21): Reading nostruct-align/2kauB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-3505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod (nostruct-align/2kauB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.115829 /projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod(22): Reading nostruct-align/1b4g.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod (nostruct-align/1b4g.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.496836 /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod(22): Reading nostruct-align/1a9xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-12890/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod (nostruct-align/1a9xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.788839 /projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod(22): Reading nostruct-align/1i8kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod (nostruct-align/1i8kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.139874 /projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod(22): Reading nostruct-align/1i8kB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod (nostruct-align/1i8kB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.989840 /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod(21): Reading nostruct-align/2knt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod (nostruct-align/2knt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.000872 /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k-w0.5.mod(22): Reading nostruct-align/1ji1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k-w0.5.mod (nostruct-align/1ji1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.319839 /projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod(22): Reading nostruct-align/1jgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod (nostruct-align/1jgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.166853 /projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod(21): Reading nostruct-align/3fruA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod (nostruct-align/3fruA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.239876 /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod(22): Reading nostruct-align/1gdoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod (nostruct-align/1gdoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.736855 /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod(21): Reading nostruct-align/1ceeB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26610/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod (nostruct-align/1ceeB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.854834 /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod(21): Reading nostruct-align/1gdoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod (nostruct-align/1gdoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.052866 /projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod(22): Reading nostruct-align/1esmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod (nostruct-align/1esmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.703882 /projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod(21): Reading nostruct-align/1qqjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod (nostruct-align/1qqjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.803843 /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod(21): Reading nostruct-align/1b64.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21550/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod (nostruct-align/1b64.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.552866 /projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod(22): Reading nostruct-align/1gm7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod (nostruct-align/1gm7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.521870 /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod(21): Reading nostruct-align/1fosE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-21578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod (nostruct-align/1fosE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.363832 /projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod(22): Reading nostruct-align/1gm7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod (nostruct-align/1gm7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.270859 /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod(21): Reading nostruct-align/1fosF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-24652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod (nostruct-align/1fosF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.960846 /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod(21): Reading nostruct-align/1tme1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-32484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod (nostruct-align/1tme1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.320856 /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod(22): Reading nostruct-align/1ezwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod (nostruct-align/1ezwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.580868 /projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod(21): Reading nostruct-align/1bwsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-11051/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod (nostruct-align/1bwsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.953850 /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod(21): Reading nostruct-align/1by1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod (nostruct-align/1by1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.017878 /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod(22): Reading nostruct-align/1lghA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod (nostruct-align/1lghA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.868835 /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod(22): Reading nostruct-align/1ha1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod (nostruct-align/1ha1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.142859 /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod(22): Reading nostruct-align/1lghB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod (nostruct-align/1lghB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.675848 /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod(21): Reading nostruct-align/1vsd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-20590/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod (nostruct-align/1vsd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.789854 /projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod(21): Reading nostruct-align/1bawA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-27939/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod (nostruct-align/1bawA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.855829 /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod(21): Reading nostruct-align/1bc5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-11619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod (nostruct-align/1bc5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.744888 /projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod(22): Reading nostruct-align/1qd6C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod (nostruct-align/1qd6C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.197887 /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod(22): Reading nostruct-align/1ois.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3560/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod (nostruct-align/1ois.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.851839 /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod(21): Reading nostruct-align/1an9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-23822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod (nostruct-align/1an9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.019875 /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod(21): Reading nostruct-align/1iknA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod (nostruct-align/1iknA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.793869 /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod(21): Reading nostruct-align/1qjaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-14723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod (nostruct-align/1qjaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.532850 /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod(21): Reading nostruct-align/1iknD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod (nostruct-align/1iknD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.778873 /projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod(22): Reading nostruct-align/1jgtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod (nostruct-align/1jgtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.205851 /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod(22): Reading nostruct-align/1b5l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod (nostruct-align/1b5l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.970858 /projects/compbio/experiments/models.97/pdb/1l/1lnrI/nostruct-align/1lnrI.t2k-w0.5.mod(22): Reading nostruct-align/1lnrI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lnrI/nostruct-align/1lnrI.t2k-w0.5.mod (nostruct-align/1lnrI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lnrI/nostruct-align/1lnrI.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.039846 /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod(22): Reading nostruct-align/1hx0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod (nostruct-align/1hx0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.910847 /projects/compbio/experiments/models.97/pdb/1k/1kczA/nostruct-align/1kczA.t2k-w0.5.mod(22): Reading nostruct-align/1kczA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-4483/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kczA/nostruct-align/1kczA.t2k-w0.5.mod (nostruct-align/1kczA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kczA/nostruct-align/1kczA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.689850 /projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod(21): Reading nostruct-align/6cpa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-20109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod (nostruct-align/6cpa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.340885 /projects/compbio/experiments/models.97/pdb/1i/1irxA/nostruct-align/1irxA.t2k-w0.5.mod(22): Reading nostruct-align/1irxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25770/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irxA/nostruct-align/1irxA.t2k-w0.5.mod (nostruct-align/1irxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irxA/nostruct-align/1irxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.660887 /projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod(22): Reading nostruct-align/1k26A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod (nostruct-align/1k26A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.726839 /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod(21): Reading nostruct-align/1occG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18590/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod (nostruct-align/1occG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.753841 /projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod(22): Reading nostruct-align/1gkzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod (nostruct-align/1gkzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.999870 /projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod(22): Reading nostruct-align/1kkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-21237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod (nostruct-align/1kkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.842840 /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod(22): Reading nostruct-align/1d5tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod (nostruct-align/1d5tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.338850 /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod(21): Reading nostruct-align/1tmf4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod (nostruct-align/1tmf4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.860878 /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod(21): Reading nostruct-align/1mykA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-10555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod (nostruct-align/1mykA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.917881 /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod(21): Reading nostruct-align/1aerA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-2452/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod (nostruct-align/1aerA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.719885 /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod(21): Reading nostruct-align/1pfsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod (nostruct-align/1pfsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.316832 /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod(22): Reading nostruct-align/1a2pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-7745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod (nostruct-align/1a2pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.091831 /projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod(21): Reading nostruct-align/1faaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23037/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod (nostruct-align/1faaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.808870 /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod(22): Reading nostruct-align/1b04A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod (nostruct-align/1b04A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.285833 /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod(22): Reading nostruct-align/1b6a.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod (nostruct-align/1b6a.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.604834 /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod(21): Reading nostruct-align/1b6e.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod (nostruct-align/1b6e.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.495834 /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod(21): Reading nostruct-align/4rnpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-10182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod (nostruct-align/4rnpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.844847 /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod(22): Reading nostruct-align/1b6g.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod (nostruct-align/1b6g.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.624859 /projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod(22): Reading nostruct-align/1qjbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod (nostruct-align/1qjbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.767860 /projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod(21): Reading nostruct-align/1vtp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod (nostruct-align/1vtp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.393877 /projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod(22): Reading nostruct-align/1hx1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod (nostruct-align/1hx1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.504871 /projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod(21): Reading nostruct-align/1hae.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod (nostruct-align/1hae.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.374865 /projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod(22): Reading nostruct-align/1jguH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod (nostruct-align/1jguH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.157835 /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod(21): Reading nostruct-align/1vtx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-24029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod (nostruct-align/1vtx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.862841 /projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod(21): Reading nostruct-align/1fouA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-26898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod (nostruct-align/1fouA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.514875 /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod(21): Reading nostruct-align/2lefA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod (nostruct-align/2lefA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.957844 /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod(21): Reading nostruct-align/1b6u.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-23245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod (nostruct-align/1b6u.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.992863 /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod(21): Reading nostruct-align/1clqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-9837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod (nostruct-align/1clqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.543831 /projects/compbio/experiments/models.97/pdb/1i/1ikoP/nostruct-align/1ikoP.t2k-w0.5.mod(22): Reading nostruct-align/1ikoP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2878/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ikoP/nostruct-align/1ikoP.t2k-w0.5.mod (nostruct-align/1ikoP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ikoP/nostruct-align/1ikoP.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.916872 /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod(22): Reading nostruct-align/1c9oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod (nostruct-align/1c9oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.692871 /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod(22): Reading nostruct-align/1han.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20575/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod (nostruct-align/1han.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.023836 /projects/compbio/experiments/models.97/pdb/1k/1kkdA/nostruct-align/1kkdA.t2k-w0.5.mod(22): Reading nostruct-align/1kkdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-27044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkdA/nostruct-align/1kkdA.t2k-w0.5.mod (nostruct-align/1kkdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkdA/nostruct-align/1kkdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.987835 /projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod(22): Reading nostruct-align/1g8yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod (nostruct-align/1g8yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.130859 /projects/compbio/experiments/models.97/pdb/1k/1k8bA/nostruct-align/1k8bA.t2k-w0.5.mod(22): Reading nostruct-align/1k8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7417/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8bA/nostruct-align/1k8bA.t2k-w0.5.mod (nostruct-align/1k8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8bA/nostruct-align/1k8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.844889 /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod(21): Reading nostruct-align/1har.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-30682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod (nostruct-align/1har.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.554850 /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod(21): Reading nostruct-align/1by3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-15002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod (nostruct-align/1by3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.785852 /projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod(22): Reading nostruct-align/1e39A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod (nostruct-align/1e39A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.129833 /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod(21): Reading nostruct-align/5nul.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod (nostruct-align/5nul.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.421829 /projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod(21): Reading nostruct-align/1i1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-24697/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod (nostruct-align/1i1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.721855 /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod(21): Reading nostruct-align/1qbzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod (nostruct-align/1qbzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.702845 /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod(21): Reading nostruct-align/1qbzC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod (nostruct-align/1qbzC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.575869 /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod(22): Reading nostruct-align/1ikpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod (nostruct-align/1ikpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.371876 /projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod(22): Reading nostruct-align/1i8nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod (nostruct-align/1i8nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.416876 /projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod(22): Reading nostruct-align/1qjcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod (nostruct-align/1qjcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.903877 /projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod(21): Reading nostruct-align/1mcpL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-4357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod (nostruct-align/1mcpL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.713865 /projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod(21): Reading nostruct-align/1f5jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod (nostruct-align/1f5jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.681866 /projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod(21): Reading nostruct-align/1hx2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-11771/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod (nostruct-align/1hx2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.247829 /projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod(22): Reading nostruct-align/1g1pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod (nostruct-align/1g1pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.879843 /projects/compbio/experiments/models.97/pdb/1k/1k28A/nostruct-align/1k28A.t2k-w0.5.mod(22): Reading nostruct-align/1k28A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k28A/nostruct-align/1k28A.t2k-w0.5.mod (nostruct-align/1k28A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k28A/nostruct-align/1k28A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.962868 /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod(21): Reading nostruct-align/1hbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod (nostruct-align/1hbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.123857 /projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod(22): Reading nostruct-align/1hb6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod (nostruct-align/1hb6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.545868 /projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod(22): Reading nostruct-align/1k28D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod (nostruct-align/1k28D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.238857 /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod(21): Reading nostruct-align/1danH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28410/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod (nostruct-align/1danH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.545853 /projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod(22): Reading nostruct-align/1kkeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod (nostruct-align/1kkeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.726864 /projects/compbio/experiments/models.97/pdb/1k/1k8cA/nostruct-align/1k8cA.t2k-w0.5.mod(22): Reading nostruct-align/1k8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8cA/nostruct-align/1k8cA.t2k-w0.5.mod (nostruct-align/1k8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8cA/nostruct-align/1k8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.132877 /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod(21): Reading nostruct-align/1hbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-31857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod (nostruct-align/1hbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.245876 /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod(21): Reading nostruct-align/1hbq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod (nostruct-align/1hbq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.988880 /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod(22): Reading nostruct-align/3stdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod (nostruct-align/3stdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.446869 /projects/compbio/experiments/models.97/pdb/1l/1l4iA/nostruct-align/1l4iA.t2k-w0.5.mod(22): Reading nostruct-align/1l4iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-30538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l4iA/nostruct-align/1l4iA.t2k-w0.5.mod (nostruct-align/1l4iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l4iA/nostruct-align/1l4iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.141880 /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod(21): Reading nostruct-align/1gseA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod (nostruct-align/1gseA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.048828 /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod(22): Reading nostruct-align/1bazA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25146/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod (nostruct-align/1bazA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.843864 /projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod(21): Reading nostruct-align/1b06A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-8961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod (nostruct-align/1b06A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.786863 /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod(21): Reading nostruct-align/1qd9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5059/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod (nostruct-align/1qd9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.718885 /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod(22): Reading nostruct-align/1bc8C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10191/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod (nostruct-align/1bc8C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.435848 /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod(21): Reading nostruct-align/1danT.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-31400/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod (nostruct-align/1danT.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.918879 /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod(21): Reading nostruct-align/1danU.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod (nostruct-align/1danU.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.807833 /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod(22): Reading nostruct-align/2arcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod (nostruct-align/2arcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.671860 /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod(21): Reading nostruct-align/2arcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4803/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod (nostruct-align/2arcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.675852 /projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod(22): Reading nostruct-align/1e9eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod (nostruct-align/1e9eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.057854 /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod(22): Reading nostruct-align/1i8oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod (nostruct-align/1i8oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.657867 /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod(21): Reading nostruct-align/1qjdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod (nostruct-align/1qjdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.361870 /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod(21): Reading nostruct-align/1hcb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod (nostruct-align/1hcb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.464842 /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod(22): Reading nostruct-align/1dwkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod (nostruct-align/1dwkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.996880 /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod(21): Reading nostruct-align/1hcc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod (nostruct-align/1hcc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.990849 /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod(21): Reading nostruct-align/1hcd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-22980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod (nostruct-align/1hcd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.140877 /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod(21): Reading nostruct-align/1hce.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-29757/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod (nostruct-align/1hce.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.140877 /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod(21): Reading nostruct-align/1hcl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-7801/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod (nostruct-align/1hcl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.012884 /projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod(21): Reading nostruct-align/1c9qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-14055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod (nostruct-align/1c9qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.907885 /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod(22): Reading nostruct-align/1dj7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod (nostruct-align/1dj7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.933859 /projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod(21): Reading nostruct-align/35c8H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod (nostruct-align/35c8H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.939848 /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod(22): Reading nostruct-align/1dj7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod (nostruct-align/1dj7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.994829 /projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod(21): Reading nostruct-align/1bwwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod (nostruct-align/1bwwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.304852 /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod(21): Reading nostruct-align/1by5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod (nostruct-align/1by5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.107876 /projects/compbio/experiments/models.97/pdb/1d/1d5wC/nostruct-align/1d5wC.t2k-w0.5.mod(22): Reading nostruct-align/1d5wC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-8297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5wC/nostruct-align/1d5wC.t2k-w0.5.mod (nostruct-align/1d5wC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5wC/nostruct-align/1d5wC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.127857 /projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod(21): Reading nostruct-align/1hcv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod (nostruct-align/1hcv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.971876 /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod(21): Reading nostruct-align/1omn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-29351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod (nostruct-align/1omn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.452852 /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod(21): Reading nostruct-align/1fadA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18134/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod (nostruct-align/1fadA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.298845 /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod(21): Reading nostruct-align/1omp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod (nostruct-align/1omp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.490847 /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod(21): Reading nostruct-align/1hcz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod (nostruct-align/1hcz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.666859 /projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod(21): Reading nostruct-align/1hvvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8442/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod (nostruct-align/1hvvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.948853 /projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod(21): Reading nostruct-align/8cho.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod (nostruct-align/8cho.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.760887 /projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod(21): Reading nostruct-align/1gdtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod (nostruct-align/1gdtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.760841 /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod(21): Reading nostruct-align/1dapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-7888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod (nostruct-align/1dapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.744888 /projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod(21): Reading nostruct-align/1hdj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-8632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod (nostruct-align/1hdj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.302858 /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod(21): Reading nostruct-align/1onc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod (nostruct-align/1onc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.454851 /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod(21): Reading nostruct-align/1hdp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod (nostruct-align/1hdp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.912842 /projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod(22): Reading nostruct-align/1dj8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod (nostruct-align/1dj8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.781878 /projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod(21): Reading nostruct-align/2hmiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod (nostruct-align/2hmiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.485853 /projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod(21): Reading nostruct-align/1hdr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod (nostruct-align/1hdr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.151840 /projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod(21): Reading nostruct-align/1by6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-31224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod (nostruct-align/1by6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.809837 /projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod(21): Reading nostruct-align/1idiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-32357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod (nostruct-align/1idiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.630880 /projects/compbio/experiments/models.97/pdb/1i/1i1gA/nostruct-align/1i1gA.t2k-w0.5.mod(22): Reading nostruct-align/1i1gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1gA/nostruct-align/1i1gA.t2k-w0.5.mod (nostruct-align/1i1gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1gA/nostruct-align/1i1gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.387859 /projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod(22): Reading nostruct-align/1faeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod (nostruct-align/1faeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.057856 /projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod(21): Reading nostruct-align/6cts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod (nostruct-align/6cts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.783867 /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod(22): Reading nostruct-align/1qqp1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod (nostruct-align/1qqp1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.308840 /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod(22): Reading nostruct-align/1qqp2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod (nostruct-align/1qqp2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.253866 /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod(22): Reading nostruct-align/1qqp3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod (nostruct-align/1qqp3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.289883 /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod(22): Reading nostruct-align/1qqp4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-4322/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod (nostruct-align/1qqp4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.563847 /projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod(22): Reading nostruct-align/1ont.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod (nostruct-align/1ont.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.596846 /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod(21): Reading nostruct-align/1e9gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod (nostruct-align/1e9gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.265833 /projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod(22): Reading nostruct-align/1e9gB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod (nostruct-align/1e9gB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.130831 /projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod(21): Reading nostruct-align/1fhoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-10986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod (nostruct-align/1fhoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.924858 /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k-w0.5.mod(22): Reading nostruct-align/1ji7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-12264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k-w0.5.mod (nostruct-align/1ji7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.613878 /projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod(22): Reading nostruct-align/1f5mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod (nostruct-align/1f5mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.300873 /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod(21): Reading nostruct-align/1b6cB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-17784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod (nostruct-align/1b6cB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.490866 /projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod(21): Reading nostruct-align/1f5mB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8119/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod (nostruct-align/1f5mB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.781839 /projects/compbio/experiments/models.97/pdb/1j/1j4wA/nostruct-align/1j4wA.t2k-w0.5.mod(22): Reading nostruct-align/1j4wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j4wA/nostruct-align/1j4wA.t2k-w0.5.mod (nostruct-align/1j4wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j4wA/nostruct-align/1j4wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.719833 /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod(22): Reading nostruct-align/1atiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-24727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod (nostruct-align/1atiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.532837 /projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod(22): Reading nostruct-align/1g1sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12794/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod (nostruct-align/1g1sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.656853 /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod(22): Reading nostruct-align/1g31A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod (nostruct-align/1g31A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.919830 /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod(21): Reading nostruct-align/1atiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-30201/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod (nostruct-align/1atiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.974871 /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod(22): Reading nostruct-align/1eu1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod (nostruct-align/1eu1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.997849 /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod(21): Reading nostruct-align/2dkb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod (nostruct-align/2dkb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.931839 /projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod(21): Reading nostruct-align/1daqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod (nostruct-align/1daqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.825848 /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod(22): Reading nostruct-align/1bpoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod (nostruct-align/1bpoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.885866 /projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod(22): Reading nostruct-align/1jobA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod (nostruct-align/1jobA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.142853 /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod(21): Reading nostruct-align/1rmvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod (nostruct-align/1rmvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.443832 /projects/compbio/experiments/models.97/pdb/1k/1kkhA/nostruct-align/1kkhA.t2k-w0.5.mod(22): Reading nostruct-align/1kkhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkhA/nostruct-align/1kkhA.t2k-w0.5.mod (nostruct-align/1kkhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkhA/nostruct-align/1kkhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.758837 /projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod(22): Reading nostruct-align/1cn3F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod (nostruct-align/1cn3F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.377867 /projects/compbio/experiments/models.97/pdb/1b/1bwyA/nostruct-align/1bwyA.t2k-w0.5.mod(22): Reading nostruct-align/1bwyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwyA/nostruct-align/1bwyA.t2k-w0.5.mod (nostruct-align/1bwyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bwyA/nostruct-align/1bwyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.497843 /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod(21): Reading nostruct-align/1mypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod (nostruct-align/1mypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.273886 /projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod(21): Reading nostruct-align/1d5yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod (nostruct-align/1d5yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.924833 /projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod(21): Reading nostruct-align/1mypB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-27787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod (nostruct-align/1mypB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.254871 /projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod(21): Reading nostruct-align/1h5bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod (nostruct-align/1h5bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.635862 /projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod(21): Reading nostruct-align/1ypcI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-6763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod (nostruct-align/1ypcI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.261831 /projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod(21): Reading nostruct-align/1tfaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8053/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod (nostruct-align/1tfaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.492830 /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod(21): Reading nostruct-align/1hev.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod (nostruct-align/1hev.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.923866 /projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod(22): Reading nostruct-align/1i1hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2599/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod (nostruct-align/1i1hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.270889 /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod(21): Reading nostruct-align/1mctA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16403/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod (nostruct-align/1mctA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.197853 /projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod(21): Reading nostruct-align/1fafA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-27387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod (nostruct-align/1fafA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.233828 /projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod(22): Reading nostruct-align/1krrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod (nostruct-align/1krrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.574854 /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod(22): Reading nostruct-align/8atcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod (nostruct-align/8atcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.796854 /projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod(22): Reading nostruct-align/1wpoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod (nostruct-align/1wpoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.691887 /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod(22): Reading nostruct-align/1wpoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod (nostruct-align/1wpoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.513889 /projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod(22): Reading nostruct-align/1eljA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7929/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod (nostruct-align/1eljA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.335829 /projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod(22): Reading nostruct-align/1im2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod (nostruct-align/1im2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.630871 /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod(21): Reading nostruct-align/1mctI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod (nostruct-align/1mctI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.455879 /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod(22): Reading nostruct-align/1iktA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31353/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod (nostruct-align/1iktA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.311886 /projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod(22): Reading nostruct-align/1qjgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-20230/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod (nostruct-align/1qjgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.512877 /projects/compbio/experiments/models.97/pdb/1j/1ji8A/nostruct-align/1ji8A.t2k-w0.5.mod(22): Reading nostruct-align/1ji8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ji8A/nostruct-align/1ji8A.t2k-w0.5.mod (nostruct-align/1ji8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ji8A/nostruct-align/1ji8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.096884 /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod(22): Reading nostruct-align/1f5nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-518929/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod (nostruct-align/1f5nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.737869 /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod(21): Reading nostruct-align/1dwnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod (nostruct-align/1dwnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.396833 /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod(22): Reading nostruct-align/1hx6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16410/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod (nostruct-align/1hx6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.914829 /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod(21): Reading nostruct-align/1hfc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-15253/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod (nostruct-align/1hfc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.524830 /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod(21): Reading nostruct-align/1celA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-18777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod (nostruct-align/1celA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.347855 /projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod(21): Reading nostruct-align/1gdvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-2263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod (nostruct-align/1gdvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.648880 /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod(22): Reading nostruct-align/1g1tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod (nostruct-align/1g1tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.822834 /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod(21): Reading nostruct-align/1hfh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-16303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod (nostruct-align/1hfh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.215839 /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod(21): Reading nostruct-align/1hfi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-28627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod (nostruct-align/1hfi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.173876 /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod(21): Reading nostruct-align/2ae2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod (nostruct-align/2ae2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.523882 /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod(22): Reading nostruct-align/1qqqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod (nostruct-align/1qqqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.500881 /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod(22): Reading nostruct-align/1opc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod (nostruct-align/1opc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.385866 /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod(22): Reading nostruct-align/1opd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod (nostruct-align/1opd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.625883 /projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod(21): Reading nostruct-align/1cn4C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-17412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod (nostruct-align/1cn4C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.442863 /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod(21): Reading nostruct-align/2dln.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29392/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod (nostruct-align/2dln.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.821827 /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod(22): Reading nostruct-align/1bwzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod (nostruct-align/1bwzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.691858 /projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod(21): Reading nostruct-align/1hfs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod (nostruct-align/1hfs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.915855 /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod(21): Reading nostruct-align/1fwcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-16502/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod (nostruct-align/1fwcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.506840 /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod(21): Reading nostruct-align/487dL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod (nostruct-align/487dL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.833839 /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod(21): Reading nostruct-align/1fwcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod (nostruct-align/1fwcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.115829 /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod(22): Reading nostruct-align/1a2vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod (nostruct-align/1a2vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.749884 /projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod(22): Reading nostruct-align/1clvI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod (nostruct-align/1clvI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.619877 /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod(22): Reading nostruct-align/1fwcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25931/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod (nostruct-align/1fwcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.505875 /projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod(21): Reading nostruct-align/1hfx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-6709/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod (nostruct-align/1hfx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.336887 /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod(21): Reading nostruct-align/1opp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod (nostruct-align/1opp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.891838 /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod(22): Reading nostruct-align/1opr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod (nostruct-align/1opr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.846882 /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod(21): Reading nostruct-align/1pnbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-12225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod (nostruct-align/1pnbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.407885 /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod(22): Reading nostruct-align/1elkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod (nostruct-align/1elkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.649841 /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod(21): Reading nostruct-align/1pnbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14878/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod (nostruct-align/1pnbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.056858 /projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod(22): Reading nostruct-align/1im3D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod (nostruct-align/1im3D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.282856 /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod(21): Reading nostruct-align/1opy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod (nostruct-align/1opy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.208830 /projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod(22): Reading nostruct-align/1g33A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod (nostruct-align/1g33A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.745874 /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod(21): Reading nostruct-align/6prcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3635/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod (nostruct-align/6prcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.495878 /projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod(22): Reading nostruct-align/1i1iP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21382/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod (nostruct-align/1i1iP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.517857 /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod(21): Reading nostruct-align/1eu3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23666/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod (nostruct-align/1eu3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.845858 /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod(22): Reading nostruct-align/1dc1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-24927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod (nostruct-align/1dc1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.271835 /projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod(21): Reading nostruct-align/2gd1O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod (nostruct-align/2gd1O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.735838 /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod(22): Reading nostruct-align/1qs0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod (nostruct-align/1qs0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.344870 /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod(22): Reading nostruct-align/1qqrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-769/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod (nostruct-align/1qqrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.318865 /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod(22): Reading nostruct-align/6prcH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-24890/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod (nostruct-align/6prcH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.533888 /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod(22): Reading nostruct-align/1qs0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod (nostruct-align/1qs0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.960835 /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod(21): Reading nostruct-align/1c9uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19979/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod (nostruct-align/1c9uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.979881 /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod(21): Reading nostruct-align/6prcL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod (nostruct-align/6prcL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.902832 /projects/compbio/experiments/models.97/pdb/1k/1k8hA/nostruct-align/1k8hA.t2k-w0.5.mod(22): Reading nostruct-align/1k8hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-18745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8hA/nostruct-align/1k8hA.t2k-w0.5.mod (nostruct-align/1k8hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8hA/nostruct-align/1k8hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.247850 /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod(21): Reading nostruct-align/6prcM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-22524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod (nostruct-align/6prcM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.208830 /projects/compbio/experiments/models.97/pdb/1l/1lgpA/nostruct-align/1lgpA.t2k-w0.5.mod(22): Reading nostruct-align/1lgpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lgpA/nostruct-align/1lgpA.t2k-w0.5.mod (nostruct-align/1lgpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lgpA/nostruct-align/1lgpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.242882 /projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod(21): Reading nostruct-align/1pfzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod (nostruct-align/1pfzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.287859 /projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod(22): Reading nostruct-align/1jvnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod (nostruct-align/1jvnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.171850 /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod(22): Reading nostruct-align/1i1jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod (nostruct-align/1i1jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.535870 /projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod(22): Reading nostruct-align/1jb0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod (nostruct-align/1jb0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.048830 /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod(21): Reading nostruct-align/1yasA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod (nostruct-align/1yasA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.186853 /projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod(21): Reading nostruct-align/1jb0C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28558/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod (nostruct-align/1jb0C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.908876 /projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod(22): Reading nostruct-align/1jb0D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod (nostruct-align/1jb0D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.091875 /projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod(22): Reading nostruct-align/1jb0E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod (nostruct-align/1jb0E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.252850 /projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod(22): Reading nostruct-align/1jb0F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod (nostruct-align/1jb0F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.311871 /projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod(21): Reading nostruct-align/1im4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-6157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod (nostruct-align/1im4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.256882 /projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod(21): Reading nostruct-align/1i8tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod (nostruct-align/1i8tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.824875 /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod(21): Reading nostruct-align/1bihA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod (nostruct-align/1bihA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.253855 /projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod(22): Reading nostruct-align/1jb0I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31514/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod (nostruct-align/1jb0I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.155834 /projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod(22): Reading nostruct-align/1jb0J.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod (nostruct-align/1jb0J.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.359863 /projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod(22): Reading nostruct-align/1jb0K.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21681/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod (nostruct-align/1jb0K.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.211876 /projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod(22): Reading nostruct-align/1jb0L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5342/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod (nostruct-align/1jb0L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.593849 /projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod(22): Reading nostruct-align/1jb0M.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod (nostruct-align/1jb0M.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.777868 /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod(22): Reading nostruct-align/1atlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod (nostruct-align/1atlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.425829 /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod(21): Reading nostruct-align/1br0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod (nostruct-align/1br0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.651852 /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod(22): Reading nostruct-align/1qs1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod (nostruct-align/1qs1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.178843 /projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod(22): Reading nostruct-align/1qqsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod (nostruct-align/1qqsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.276836 /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod(22): Reading nostruct-align/1orc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod (nostruct-align/1orc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.794861 /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod(21): Reading nostruct-align/1clxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20144/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod (nostruct-align/1clxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.958872 /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod(21): Reading nostruct-align/8fabA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod (nostruct-align/8fabA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.158878 /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod(21): Reading nostruct-align/2masA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26241/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod (nostruct-align/2masA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.396885 /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod(21): Reading nostruct-align/8fabB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod (nostruct-align/8fabB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.683857 /projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod(22): Reading nostruct-align/1jb0X.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19261/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod (nostruct-align/1jb0X.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.700874 /projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod(21): Reading nostruct-align/2sodB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod (nostruct-align/2sodB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.814846 /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod(21): Reading nostruct-align/1glaF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod (nostruct-align/1glaF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.348831 /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod(22): Reading nostruct-align/1a2xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod (nostruct-align/1a2xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.072886 /projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod(21): Reading nostruct-align/1ctaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod (nostruct-align/1ctaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.229828 /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod(22): Reading nostruct-align/1e2aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24560/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod (nostruct-align/1e2aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.936850 /projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod(21): Reading nostruct-align/1i1kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25016/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod (nostruct-align/1i1kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.421846 /projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod(22): Reading nostruct-align/1jb1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod (nostruct-align/1jb1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.084860 /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod(22): Reading nostruct-align/1dpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11241/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod (nostruct-align/1dpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.516880 /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod(22): Reading nostruct-align/1im5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod (nostruct-align/1im5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.917830 /projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod(21): Reading nostruct-align/1e9kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-7530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod (nostruct-align/1e9kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.011881 /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod(22): Reading nostruct-align/2sak.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod (nostruct-align/2sak.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.070875 /projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod(21): Reading nostruct-align/1f5qB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8512/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod (nostruct-align/1f5qB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.286856 /projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod(21): Reading nostruct-align/2nllA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-7105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod (nostruct-align/2nllA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.763872 /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod(21): Reading nostruct-align/2nllB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod (nostruct-align/2nllB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.381853 /projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod(22): Reading nostruct-align/1eswA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod (nostruct-align/1eswA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.843859 /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod(21): Reading nostruct-align/2sas.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2858/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod (nostruct-align/2sas.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.831863 /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod(21): Reading nostruct-align/1aa0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26635/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod (nostruct-align/1aa0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.165861 /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod(21): Reading nostruct-align/1qs2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod (nostruct-align/1qs2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.146858 /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod(22): Reading nostruct-align/1qqtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod (nostruct-align/1qqtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.163885 /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod(21): Reading nostruct-align/1osa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32558/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod (nostruct-align/1osa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.327873 /projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod(22): Reading nostruct-align/1jofA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod (nostruct-align/1jofA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.093838 /projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod(22): Reading nostruct-align/1aa2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-31081/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod (nostruct-align/1aa2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.193850 /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod(21): Reading nostruct-align/2matA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod (nostruct-align/2matA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.365864 /projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod(22): Reading nostruct-align/1aa6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod (nostruct-align/1aa6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.546871 /projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod(21): Reading nostruct-align/1hip.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod (nostruct-align/1hip.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.113863 /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod(21): Reading nostruct-align/1ag9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod (nostruct-align/1ag9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.413874 /projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod(21): Reading nostruct-align/1a2yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod (nostruct-align/1a2yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.234861 /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod(21): Reading nostruct-align/1a2yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-32123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod (nostruct-align/1a2yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.129869 /projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod(22): Reading nostruct-align/1jb2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22801/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod (nostruct-align/1jb2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.852884 /projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod(22): Reading nostruct-align/1hq0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod (nostruct-align/1hq0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.558876 /projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod(21): Reading nostruct-align/1e9lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14418/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod (nostruct-align/1e9lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.695827 /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod(22): Reading nostruct-align/1mkaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod (nostruct-align/1mkaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.115843 /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod(21): Reading nostruct-align/1qjkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod (nostruct-align/1qjkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.080837 /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod(22): Reading nostruct-align/1fj2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14042/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod (nostruct-align/1fj2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.893827 /projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod(22): Reading nostruct-align/1jvpP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod (nostruct-align/1jvpP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.094856 /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod(21): Reading nostruct-align/1vtmP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod (nostruct-align/1vtmP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.406851 /projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod(21): Reading nostruct-align/1esxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-23889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod (nostruct-align/1esxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.451836 /projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod(22): Reading nostruct-align/1k1aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod (nostruct-align/1k1aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.902874 /projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod(21): Reading nostruct-align/1isaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod (nostruct-align/1isaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.077879 /projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod(22): Reading nostruct-align/1g1xC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod (nostruct-align/1g1xC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.070850 /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod(22): Reading nostruct-align/1d02A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod (nostruct-align/1d02A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.141872 /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod(21): Reading nostruct-align/2dpg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod (nostruct-align/2dpg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.606838 /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod(21): Reading nostruct-align/1ab3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod (nostruct-align/1ab3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.560831 /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod(21): Reading nostruct-align/1ab4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25348/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod (nostruct-align/1ab4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.438879 /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod(21): Reading nostruct-align/1hjp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod (nostruct-align/1hjp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072834 /projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod(22): Reading nostruct-align/1k8kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod (nostruct-align/1k8kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.901840 /projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod(22): Reading nostruct-align/1k8kB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod (nostruct-align/1k8kB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.910845 /projects/compbio/experiments/models.97/pdb/1l/1li1A/nostruct-align/1li1A.t2k-w0.5.mod(22): Reading nostruct-align/1li1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1li1A/nostruct-align/1li1A.t2k-w0.5.mod (nostruct-align/1li1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1li1A/nostruct-align/1li1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.817881 /projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod(22): Reading nostruct-align/1k8kC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod (nostruct-align/1k8kC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.256865 /projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod(22): Reading nostruct-align/1k8kD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod (nostruct-align/1k8kD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.728859 /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod(21): Reading nostruct-align/1glcG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod (nostruct-align/1glcG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.548838 /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod(22): Reading nostruct-align/1a2zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod (nostruct-align/1a2zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.285831 /projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod(21): Reading nostruct-align/4rxn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29922/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod (nostruct-align/4rxn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.659887 /projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod(22): Reading nostruct-align/1k8kE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod (nostruct-align/1k8kE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.643843 /projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod(22): Reading nostruct-align/1k8kF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod (nostruct-align/1k8kF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.114861 /projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod(22): Reading nostruct-align/1gsmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod (nostruct-align/1gsmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.417828 /projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod(22): Reading nostruct-align/1k8kG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24907/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod (nostruct-align/1k8kG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.709835 /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod(22): Reading nostruct-align/1jb3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod (nostruct-align/1jb3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.000885 /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod(21): Reading nostruct-align/1aab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-25325/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod (nostruct-align/1aab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.537840 /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod(22): Reading nostruct-align/1hq1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod (nostruct-align/1hq1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.710831 /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod(21): Reading nostruct-align/1aac.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-6928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod (nostruct-align/1aac.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.137873 /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod(21): Reading nostruct-align/1aaf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-9628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod (nostruct-align/1aaf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.025845 /projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod(21): Reading nostruct-align/1e9mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod (nostruct-align/1e9mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.872847 /projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod(22): Reading nostruct-align/1fhuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod (nostruct-align/1fhuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.555885 /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod(21): Reading nostruct-align/1aaj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-29841/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod (nostruct-align/1aaj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.353880 /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod(21): Reading nostruct-align/1hka.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod (nostruct-align/1hka.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.825859 /projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod(21): Reading nostruct-align/1f5sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-11135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod (nostruct-align/1f5sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.237886 /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod(21): Reading nostruct-align/1ceqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-32418/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod (nostruct-align/1ceqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.020847 /projects/compbio/experiments/models.97/pdb/1l/1lvfA/nostruct-align/1lvfA.t2k-w0.5.mod(22): Reading nostruct-align/1lvfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvfA/nostruct-align/1lvfA.t2k-w0.5.mod (nostruct-align/1lvfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lvfA/nostruct-align/1lvfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.930847 /projects/compbio/experiments/models.97/pdb/1k/1kddA/nostruct-align/1kddA.t2k-w0.5.mod(22): Reading nostruct-align/1kddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-26957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kddA/nostruct-align/1kddA.t2k-w0.5.mod (nostruct-align/1kddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kddA/nostruct-align/1kddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.210850 /projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod(21): Reading nostruct-align/1ac0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-5524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod (nostruct-align/1ac0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.769888 /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod(21): Reading nostruct-align/1qqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod (nostruct-align/1qqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.106873 /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod(21): Reading nostruct-align/1xtcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod (nostruct-align/1xtcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.714880 /projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod(22): Reading nostruct-align/1pa2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod (nostruct-align/1pa2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.873854 /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod(21): Reading nostruct-align/1ac5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod (nostruct-align/1ac5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.345854 /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod(22): Reading nostruct-align/1a49A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod (nostruct-align/1a49A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.734882 /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod(21): Reading nostruct-align/1ctdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod (nostruct-align/1ctdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.229828 /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod(22): Reading nostruct-align/1i1nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod (nostruct-align/1i1nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.525877 /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod(22): Reading nostruct-align/1aba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod (nostruct-align/1aba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.967836 /projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod(21): Reading nostruct-align/1dpjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod (nostruct-align/1dpjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.911839 /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod(22): Reading nostruct-align/1dpjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod (nostruct-align/1dpjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.798885 /projects/compbio/experiments/models.97/pdb/1e/1elpA/nostruct-align/1elpA.t2k-w0.5.mod(22): Reading nostruct-align/1elpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-17870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elpA/nostruct-align/1elpA.t2k-w0.5.mod (nostruct-align/1elpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elpA/nostruct-align/1elpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.607849 /projects/compbio/experiments/models.97/pdb/1i/1ikzA/nostruct-align/1ikzA.t2k-w0.5.mod(22): Reading nostruct-align/1ikzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11183/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ikzA/nostruct-align/1ikzA.t2k-w0.5.mod (nostruct-align/1ikzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ikzA/nostruct-align/1ikzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.605867 /projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod(22): Reading nostruct-align/1im8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod (nostruct-align/1im8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.021845 /projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod(22): Reading nostruct-align/1tmqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod (nostruct-align/1tmqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.776844 /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod(21): Reading nostruct-align/9wgaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-8500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod (nostruct-align/9wgaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.374887 /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod(21): Reading nostruct-align/1mkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-24046/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod (nostruct-align/1mkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.814880 /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod(21): Reading nostruct-align/1hlb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod (nostruct-align/1hlb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479836 /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod(21): Reading nostruct-align/1dwtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-12740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod (nostruct-align/1dwtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.567827 /projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod(22): Reading nostruct-align/1c2pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod (nostruct-align/1c2pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.560833 /projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod(22): Reading nostruct-align/1g38A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod (nostruct-align/1g38A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.437830 /projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod(21): Reading nostruct-align/1eu8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod (nostruct-align/1eu8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.605864 /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod(21): Reading nostruct-align/1iscA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31396/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod (nostruct-align/1iscA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.055851 /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod(22): Reading nostruct-align/1ad2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod (nostruct-align/1ad2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.811831 /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod(21): Reading nostruct-align/2nsyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15532/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod (nostruct-align/2nsyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.450853 /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod(22): Reading nostruct-align/2dri.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19161/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod (nostruct-align/2dri.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.700855 /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod(21): Reading nostruct-align/1np1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod (nostruct-align/1np1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.853863 /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod(21): Reading nostruct-align/1abv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod (nostruct-align/1abv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.642834 /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod(21): Reading nostruct-align/3vtk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-16901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod (nostruct-align/3vtk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.763859 /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod(22): Reading nostruct-align/1kkoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod (nostruct-align/1kkoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.980843 /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod(21): Reading nostruct-align/1ad6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-26090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod (nostruct-align/1ad6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.685865 /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod(21): Reading nostruct-align/1abz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-1108/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod (nostruct-align/1abz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.823835 /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod(22): Reading nostruct-align/2hmqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12716/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod (nostruct-align/2hmqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.336872 /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod(21): Reading nostruct-align/2pldA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-12124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod (nostruct-align/2pldA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.067833 /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod(22): Reading nostruct-align/1gsoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14663/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod (nostruct-align/1gsoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.912857 /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod(21): Reading nostruct-align/1aca.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod (nostruct-align/1aca.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.448839 /projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod(22): Reading nostruct-align/1hq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod (nostruct-align/1hq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.269852 /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod(22): Reading nostruct-align/1acc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod (nostruct-align/1acc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.397854 /projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod(22): Reading nostruct-align/1hq3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod (nostruct-align/1hq3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.735859 /projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod(22): Reading nostruct-align/1hq3C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22708/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod (nostruct-align/1hq3C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.881859 /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod(21): Reading nostruct-align/1acf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod (nostruct-align/1acf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.571856 /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod(21): Reading nostruct-align/1elqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod (nostruct-align/1elqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.152838 /projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod(21): Reading nostruct-align/1hq3D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-30112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod (nostruct-align/1hq3D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.709860 /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod(22): Reading nostruct-align/2trxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod (nostruct-align/2trxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.105864 /projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod(21): Reading nostruct-align/1aci.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod (nostruct-align/1aci.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.867846 /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod(21): Reading nostruct-align/1hma.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod (nostruct-align/1hma.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.940865 /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod(22): Reading nostruct-align/3vub.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod (nostruct-align/3vub.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.616879 /projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod(21): Reading nostruct-align/1hme.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-23802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod (nostruct-align/1hme.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.079834 /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod(21): Reading nostruct-align/1acp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod (nostruct-align/1acp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.517845 /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod(22): Reading nostruct-align/1bpwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod (nostruct-align/1bpwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.860868 /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod(21): Reading nostruct-align/1rh2F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-19649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod (nostruct-align/1rh2F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.394863 /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod(21): Reading nostruct-align/1hml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod (nostruct-align/1hml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.334885 /projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod(21): Reading nostruct-align/1acw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-5282/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod (nostruct-align/1acw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.342886 /projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod(21): Reading nostruct-align/1acx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-30945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod (nostruct-align/1acx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.446857 /projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod(21): Reading nostruct-align/1ae7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-9284/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod (nostruct-align/1ae7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.514851 /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod(21): Reading nostruct-align/1acz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod (nostruct-align/1acz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.769888 /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod(21): Reading nostruct-align/1hms.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod (nostruct-align/1hms.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.622883 /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod(21): Reading nostruct-align/1hmt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-28495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod (nostruct-align/1hmt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.564844 /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod(21): Reading nostruct-align/2pleA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod (nostruct-align/2pleA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.064882 /projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod(22): Reading nostruct-align/1idrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod (nostruct-align/1idrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.015831 /projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod(22): Reading nostruct-align/1jx2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod (nostruct-align/1jx2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.072889 /projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod(21): Reading nostruct-align/1e2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod (nostruct-align/1e2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.437885 /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod(21): Reading nostruct-align/2sfa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-18029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod (nostruct-align/2sfa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.867861 /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod(22): Reading nostruct-align/1hmy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23321/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod (nostruct-align/1hmy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.414839 /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod(21): Reading nostruct-align/1add.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-21914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod (nostruct-align/1add.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.031883 /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod(21): Reading nostruct-align/1elrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-32705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod (nostruct-align/1elrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.630867 /projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod(22): Reading nostruct-align/1binA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod (nostruct-align/1binA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.612867 /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod(22): Reading nostruct-align/1f74A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31249/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod (nostruct-align/1f74A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.973862 /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod(21): Reading nostruct-align/1f5vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6410/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod (nostruct-align/1f5vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.685843 /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod(21): Reading nostruct-align/1cg2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-27127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod (nostruct-align/1cg2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.154831 /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod(21): Reading nostruct-align/1c2rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod (nostruct-align/1c2rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.331833 /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod(21): Reading nostruct-align/1adn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod (nostruct-align/1adn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.559834 /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod(21): Reading nostruct-align/1hnf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod (nostruct-align/1hnf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.532875 /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod(22): Reading nostruct-align/1k1eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod (nostruct-align/1k1eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.575865 /projects/compbio/experiments/models.97/pdb/1d/1d06A/nostruct-align/1d06A.t2k-w0.5.mod(22): Reading nostruct-align/1d06A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-28589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d06A/nostruct-align/1d06A.t2k-w0.5.mod (nostruct-align/1d06A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d06A/nostruct-align/1d06A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.179855 /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod(22): Reading nostruct-align/1mroA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod (nostruct-align/1mroA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.627865 /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod(21): Reading nostruct-align/1adr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10308/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod (nostruct-align/1adr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.476831 /projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod(22): Reading nostruct-align/1dazC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18288/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod (nostruct-align/1dazC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.521847 /projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod(21): Reading nostruct-align/1qqyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-20425/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod (nostruct-align/1qqyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.454866 /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod(21): Reading nostruct-align/1oxa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2976/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod (nostruct-align/1oxa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.184879 /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod(21): Reading nostruct-align/1mroB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod (nostruct-align/1mroB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.561869 /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod(22): Reading nostruct-align/1ads.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod (nostruct-align/1ads.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.302841 /projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod(22): Reading nostruct-align/1adt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod (nostruct-align/1adt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.460829 /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod(21): Reading nostruct-align/1mroC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod (nostruct-align/1mroC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.390862 /projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod(22): Reading nostruct-align/1af3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-4643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod (nostruct-align/1af3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.448889 /projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod(21): Reading nostruct-align/1af5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-25637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod (nostruct-align/1af5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.037874 /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod(21): Reading nostruct-align/1adx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7636/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod (nostruct-align/1adx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.942833 /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod(22): Reading nostruct-align/1af7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod (nostruct-align/1af7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.352861 /projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod(21): Reading nostruct-align/1af8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod (nostruct-align/1af8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.548889 /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod(21): Reading nostruct-align/1hnr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod (nostruct-align/1hnr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.200882 /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod(22): Reading nostruct-align/1bxaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod (nostruct-align/1bxaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.071863 /projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod(22): Reading nostruct-align/1li5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod (nostruct-align/1li5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.226830 /projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod(21): Reading nostruct-align/1fwkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-15352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod (nostruct-align/1fwkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.905880 /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod(21): Reading nostruct-align/1d6aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod (nostruct-align/1d6aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.948837 /projects/compbio/experiments/models.97/pdb/1l/1l4uA/nostruct-align/1l4uA.t2k-w0.5.mod(22): Reading nostruct-align/1l4uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30417/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l4uA/nostruct-align/1l4uA.t2k-w0.5.mod (nostruct-align/1l4uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l4uA/nostruct-align/1l4uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.707882 /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod(21): Reading nostruct-align/1wab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2630/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod (nostruct-align/1wab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.957867 /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod(22): Reading nostruct-align/2dtr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod (nostruct-align/2dtr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.881882 /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod(21): Reading nostruct-align/1if1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod (nostruct-align/1if1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.850880 /projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod(21): Reading nostruct-align/1idsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod (nostruct-align/1idsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.891874 /projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod(21): Reading nostruct-align/1e2gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-4238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod (nostruct-align/1e2gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.530886 /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod(21): Reading nostruct-align/1wad.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod (nostruct-align/1wad.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.419872 /projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod(22): Reading nostruct-align/1i1qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod (nostruct-align/1i1qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.030849 /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod(22): Reading nostruct-align/2sga.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6114/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod (nostruct-align/2sga.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.649837 /projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod(21): Reading nostruct-align/1i1qB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod (nostruct-align/1i1qB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.410854 /projects/compbio/experiments/models.97/pdb/1k/1kt9A/nostruct-align/1kt9A.t2k-w0.5.mod(22): Reading nostruct-align/1kt9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kt9A/nostruct-align/1kt9A.t2k-w0.5.mod (nostruct-align/1kt9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kt9A/nostruct-align/1kt9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.149860 /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod(21): Reading nostruct-align/1faoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod (nostruct-align/1faoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.272879 /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod(21): Reading nostruct-align/1ubpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3337/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod (nostruct-align/1ubpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.680845 /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod(21): Reading nostruct-align/1ordA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod (nostruct-align/1ordA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.775871 /projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod(22): Reading nostruct-align/1jb7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod (nostruct-align/1jb7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.373865 /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod(21): Reading nostruct-align/1ubpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod (nostruct-align/1ubpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.334881 /projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod(21): Reading nostruct-align/1jb7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod (nostruct-align/1jb7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.811842 /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod(21): Reading nostruct-align/1hp8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod (nostruct-align/1hp8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.954828 /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod(22): Reading nostruct-align/1ubpC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod (nostruct-align/1ubpC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.827841 /projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod(22): Reading nostruct-align/1howA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-11157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod (nostruct-align/1howA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.125830 /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod(22): Reading nostruct-align/2pspA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod (nostruct-align/2pspA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.623854 /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod(22): Reading nostruct-align/1qjpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3597/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod (nostruct-align/1qjpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.450853 /projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod(21): Reading nostruct-align/1fj7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod (nostruct-align/1fj7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.713882 /projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod(21): Reading nostruct-align/1f75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10621/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod (nostruct-align/1f75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.530853 /projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod(21): Reading nostruct-align/1f5wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod (nostruct-align/1f5wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.566875 /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod(22): Reading nostruct-align/1dy5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod (nostruct-align/1dy5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.423851 /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod(22): Reading nostruct-align/2nlrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29128/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod (nostruct-align/2nlrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.250881 /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod(21): Reading nostruct-align/1nglA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod (nostruct-align/1nglA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.464872 /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod(21): Reading nostruct-align/1ceuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod (nostruct-align/1ceuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.605862 /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod(21): Reading nostruct-align/1av1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod (nostruct-align/1av1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.069830 /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod(22): Reading nostruct-align/1hoe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod (nostruct-align/1hoe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.950878 /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod(21): Reading nostruct-align/2kinA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod (nostruct-align/2kinA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.320860 /projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod(22): Reading nostruct-align/1k1fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod (nostruct-align/1k1fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.220881 /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod(21): Reading nostruct-align/2kinB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod (nostruct-align/2kinB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.795862 /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod(21): Reading nostruct-align/1zeiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod (nostruct-align/1zeiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.383831 /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod(22): Reading nostruct-align/1aep.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod (nostruct-align/1aep.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.282875 /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod(21): Reading nostruct-align/2ohxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20667/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod (nostruct-align/2ohxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.927862 /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod(22): Reading nostruct-align/1bpyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod (nostruct-align/1bpyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.845879 /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod(21): Reading nostruct-align/1ocrC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-6165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod (nostruct-align/1ocrC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.073872 /projects/compbio/experiments/models.97/pdb/1q/1qs8A/nostruct-align/1qs8A.t2k-w0.5.mod(22): Reading nostruct-align/1qs8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs8A/nostruct-align/1qs8A.t2k-w0.5.mod (nostruct-align/1qs8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qs8A/nostruct-align/1qs8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.746843 /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod(21): Reading nostruct-align/1oya.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod (nostruct-align/1oya.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.809837 /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod(21): Reading nostruct-align/1ocrD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod (nostruct-align/1ocrD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.688873 /projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod(21): Reading nostruct-align/1ag2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-25993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod (nostruct-align/1ag2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.056870 /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod(21): Reading nostruct-align/1oyc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-6668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod (nostruct-align/1oyc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.654886 /projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod(21): Reading nostruct-align/3timA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod (nostruct-align/3timA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.003849 /projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod(21): Reading nostruct-align/1np4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10262/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod (nostruct-align/1np4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.833830 /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod(21): Reading nostruct-align/1ag4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod (nostruct-align/1ag4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.991877 /projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod(21): Reading nostruct-align/1aew.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod (nostruct-align/1aew.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.607845 /projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod(21): Reading nostruct-align/1ag6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod (nostruct-align/1ag6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.556847 /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod(22): Reading nostruct-align/1ag7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod (nostruct-align/1ag7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.944845 /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod(22): Reading nostruct-align/2dnjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod (nostruct-align/2dnjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.634834 /projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod(21): Reading nostruct-align/1hhnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod (nostruct-align/1hhnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.383839 /projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod(21): Reading nostruct-align/1d6bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-6881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod (nostruct-align/1d6bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.213850 /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod(21): Reading nostruct-align/1wba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23396/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod (nostruct-align/1wba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.914833 /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod(22): Reading nostruct-align/1jx4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod (nostruct-align/1jx4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.316832 /projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod(22): Reading nostruct-align/1eejA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod (nostruct-align/1eejA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.591845 /projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod(21): Reading nostruct-align/1i1rB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10536/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod (nostruct-align/1i1rB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.637856 /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod(21): Reading nostruct-align/1pnkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-23320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod (nostruct-align/1pnkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.418882 /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod(22): Reading nostruct-align/1en2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod (nostruct-align/1en2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.534836 /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod(21): Reading nostruct-align/1pnkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-18263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod (nostruct-align/1pnkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.903830 /projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod(22): Reading nostruct-align/1e9rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod (nostruct-align/1e9rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.086870 /projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod(21): Reading nostruct-align/1afi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-29496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod (nostruct-align/1afi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.149887 /projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod(21): Reading nostruct-align/1f5xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-7935/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod (nostruct-align/1f5xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.064827 /projects/compbio/experiments/models.97/pdb/1k/1k1gA/nostruct-align/1k1gA.t2k-w0.5.mod(22): Reading nostruct-align/1k1gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1gA/nostruct-align/1k1gA.t2k-w0.5.mod (nostruct-align/1k1gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1gA/nostruct-align/1k1gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.455835 /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod(21): Reading nostruct-align/1afp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod (nostruct-align/1afp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.329834 /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod(21): Reading nostruct-align/1hph.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod (nostruct-align/1hph.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.909853 /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod(21): Reading nostruct-align/1hpi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod (nostruct-align/1hpi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.694830 /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod(21): Reading nostruct-align/1ah1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod (nostruct-align/1ah1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.338833 /projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod(22): Reading nostruct-align/8rucA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-26991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod (nostruct-align/8rucA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.900856 /projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod(22): Reading nostruct-align/1ah6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod (nostruct-align/1ah6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.734844 /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod(22): Reading nostruct-align/1ah7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod (nostruct-align/1ah7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.223841 /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod(21): Reading nostruct-align/1ah9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-17408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod (nostruct-align/1ah9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.613871 /projects/compbio/experiments/models.97/pdb/1l/1lgyA/nostruct-align/1lgyA.t2k-w0.5.mod(22): Reading nostruct-align/1lgyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-28528/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lgyA/nostruct-align/1lgyA.t2k-w0.5.mod (nostruct-align/1lgyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lgyA/nostruct-align/1lgyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.738878 /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod(22): Reading nostruct-align/3caoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod (nostruct-align/3caoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.771847 /projects/compbio/experiments/models.97/pdb/1j/1jvwA/nostruct-align/1jvwA.t2k-w0.5.mod(22): Reading nostruct-align/1jvwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvwA/nostruct-align/1jvwA.t2k-w0.5.mod (nostruct-align/1jvwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jvwA/nostruct-align/1jvwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.224840 /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod(21): Reading nostruct-align/8rucI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod (nostruct-align/8rucI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.057848 /projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod(22): Reading nostruct-align/1i31A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod (nostruct-align/1i31A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.400845 /projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod(21): Reading nostruct-align/1jb9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod (nostruct-align/1jb9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.214846 /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod(21): Reading nostruct-align/1hpy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17134/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod (nostruct-align/1hpy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.745872 /projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod(21): Reading nostruct-align/3lynA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod (nostruct-align/3lynA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.499866 /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod(22): Reading nostruct-align/1eluA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod (nostruct-align/1eluA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.583845 /projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod(22): Reading nostruct-align/1eluB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod (nostruct-align/1eluB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.613873 /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod(21): Reading nostruct-align/1agg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod (nostruct-align/1agg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.597866 /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod(22): Reading nostruct-align/1ql0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod (nostruct-align/1ql0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.217878 /projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod(21): Reading nostruct-align/1agi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8400/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod (nostruct-align/1agi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.392838 /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod(21): Reading nostruct-align/2sil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-16378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod (nostruct-align/2sil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.471832 /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod(22): Reading nostruct-align/1jhdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30621/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod (nostruct-align/1jhdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.335859 /projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod(21): Reading nostruct-align/1f5yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-24054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod (nostruct-align/1f5yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.775866 /projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod(22): Reading nostruct-align/1afb1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod (nostruct-align/1afb1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.208845 /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod(21): Reading nostruct-align/1cg5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-32168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod (nostruct-align/1cg5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.284836 /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod(21): Reading nostruct-align/1c2uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod (nostruct-align/1c2uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.048849 /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod(22): Reading nostruct-align/1cg5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod (nostruct-align/1cg5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.549839 /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod(21): Reading nostruct-align/1vfaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod (nostruct-align/1vfaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.126867 /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod(21): Reading nostruct-align/1octC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17091/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod (nostruct-align/1octC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.667864 /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod(21): Reading nostruct-align/1hqi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod (nostruct-align/1hqi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.215874 /projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod(22): Reading nostruct-align/1d09B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod (nostruct-align/1d09B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.298859 /projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod(21): Reading nostruct-align/1agt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod (nostruct-align/1agt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.724886 /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod(22): Reading nostruct-align/1cewI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod (nostruct-align/1cewI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.045877 /projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod(22): Reading nostruct-align/1kktA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4472/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod (nostruct-align/1kktA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.453859 /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod(21): Reading nostruct-align/1agx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-12474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod (nostruct-align/1agx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.385839 /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod(21): Reading nostruct-align/1difA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-7518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod (nostruct-align/1difA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.085863 /projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod(22): Reading nostruct-align/1k8rB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod (nostruct-align/1k8rB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.922882 /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod(21): Reading nostruct-align/1bxdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod (nostruct-align/1bxdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.621887 /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod(22): Reading nostruct-align/1jx6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-8178/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod (nostruct-align/1jx6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.577829 /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod(21): Reading nostruct-align/1bbhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod (nostruct-align/1bbhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.748877 /projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod(21): Reading nostruct-align/1qciA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-29994/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod (nostruct-align/1qciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.131845 /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod(21): Reading nostruct-align/1dppA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod (nostruct-align/1dppA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.961840 /projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod(21): Reading nostruct-align/1hq8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod (nostruct-align/1hq8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.589832 /projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod(22): Reading nostruct-align/1hozA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31284/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod (nostruct-align/1hozA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.138842 /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod(21): Reading nostruct-align/1elvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6790/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod (nostruct-align/1elvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.952835 /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod(21): Reading nostruct-align/1ql1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8560/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod (nostruct-align/1ql1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.150883 /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod(22): Reading nostruct-align/1hra.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod (nostruct-align/1hra.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.908854 /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod(21): Reading nostruct-align/1ahl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-14899/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod (nostruct-align/1ahl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.210886 /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod(21): Reading nostruct-align/1c44A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-28416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod (nostruct-align/1c44A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.915861 /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod(21): Reading nostruct-align/1ahm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod (nostruct-align/1ahm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.136858 /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod(21): Reading nostruct-align/1hre.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8043/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod (nostruct-align/1hre.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.418856 /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod(21): Reading nostruct-align/1vfbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-16978/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod (nostruct-align/1vfbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.277838 /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod(22): Reading nostruct-align/1aho.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-5643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod (nostruct-align/1aho.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.487854 /projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod(22): Reading nostruct-align/1isiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod (nostruct-align/1isiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.929844 /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod(21): Reading nostruct-align/2dgcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-28857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod (nostruct-align/2dgcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.639843 /projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod(21): Reading nostruct-align/1aj0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod (nostruct-align/1aj0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.308851 /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod(21): Reading nostruct-align/1aj2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod (nostruct-align/1aj2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.033873 /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod(21): Reading nostruct-align/1aj3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10120/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod (nostruct-align/1aj3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.745857 /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod(22): Reading nostruct-align/1cmaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod (nostruct-align/1cmaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.667879 /projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod(22): Reading nostruct-align/1rnbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11282/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod (nostruct-align/1rnbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.067863 /projects/compbio/experiments/models.97/pdb/1k/1kkuA/nostruct-align/1kkuA.t2k-w0.5.mod(22): Reading nostruct-align/1kkuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkuA/nostruct-align/1kkuA.t2k-w0.5.mod (nostruct-align/1kkuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kkuA/nostruct-align/1kkuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.236866 /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod(21): Reading nostruct-align/1aj6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod (nostruct-align/1aj6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.925840 /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod(21): Reading nostruct-align/1hrq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8047/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod (nostruct-align/1hrq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.142851 /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod(22): Reading nostruct-align/1bxeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28663/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod (nostruct-align/1bxeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.458870 /projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod(21): Reading nostruct-align/1fwoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-15759/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod (nostruct-align/1fwoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.357857 /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod(22): Reading nostruct-align/1a3aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod (nostruct-align/1a3aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.549885 /projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod(21): Reading nostruct-align/1eemA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1036/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod (nostruct-align/1eemA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.074829 /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod(22): Reading nostruct-align/1e2kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod (nostruct-align/1e2kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.442873 /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod(21): Reading nostruct-align/1a3aC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-7763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod (nostruct-align/1a3aC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.158852 /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod(21): Reading nostruct-align/1fc1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-6683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod (nostruct-align/1fc1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.624857 /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod(22): Reading nostruct-align/1aie.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod (nostruct-align/1aie.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.018879 /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod(22): Reading nostruct-align/1elwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24694/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod (nostruct-align/1elwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.222832 /projects/compbio/experiments/models.97/pdb/1k/1kzhA/nostruct-align/1kzhA.t2k-w0.5.mod(22): Reading nostruct-align/1kzhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-6095/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzhA/nostruct-align/1kzhA.t2k-w0.5.mod (nostruct-align/1kzhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kzhA/nostruct-align/1kzhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.581884 /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod(21): Reading nostruct-align/2fnbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10620/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod (nostruct-align/2fnbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.609867 /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod(22): Reading nostruct-align/1jhfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod (nostruct-align/1jhfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.819847 /projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod(22): Reading nostruct-align/1dy9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5356/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod (nostruct-align/1dy9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.198845 /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod(22): Reading nostruct-align/1wer.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6580/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod (nostruct-align/1wer.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.784845 /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod(22): Reading nostruct-align/1ail.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-1640/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod (nostruct-align/1ail.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.972855 /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod(21): Reading nostruct-align/1aim.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-12565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod (nostruct-align/1aim.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.138859 /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod(21): Reading nostruct-align/1air.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod (nostruct-align/1air.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.617859 /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod(22): Reading nostruct-align/1ak0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14121/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod (nostruct-align/1ak0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.199867 /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod(21): Reading nostruct-align/1ak1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22343/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod (nostruct-align/1ak1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.428867 /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod(21): Reading nostruct-align/1aiu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-24730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod (nostruct-align/1aiu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.535870 /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod(21): Reading nostruct-align/1hsm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-18086/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod (nostruct-align/1hsm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.259859 /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod(22): Reading nostruct-align/1cmbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod (nostruct-align/1cmbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.667879 /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod(21): Reading nostruct-align/1aiw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-14925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod (nostruct-align/1aiw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.445866 /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod(22): Reading nostruct-align/1ak5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod (nostruct-align/1ak5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.551853 /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t2k-w0.5.mod(22): Reading nostruct-align/1km4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t2k-w0.5.mod (nostruct-align/1km4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.085836 /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod(21): Reading nostruct-align/1ak7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-21926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod (nostruct-align/1ak7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.092840 /projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod(22): Reading nostruct-align/1k8tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod (nostruct-align/1k8tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.808886 /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod(21): Reading nostruct-align/1hsq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod (nostruct-align/1hsq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.305870 /projects/compbio/experiments/models.97/pdb/1h/1hj0A/nostruct-align/1hj0A.t2k-w0.5.mod(22): Reading nostruct-align/1hj0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-23246/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hj0A/nostruct-align/1hj0A.t2k-w0.5.mod (nostruct-align/1hj0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hj0A/nostruct-align/1hj0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.269850 /projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod(22): Reading nostruct-align/1hsr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod (nostruct-align/1hsr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.169888 /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod(21): Reading nostruct-align/2lbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-15667/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod (nostruct-align/2lbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.394886 /projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod(21): Reading nostruct-align/1h5pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-30215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod (nostruct-align/1h5pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.904886 /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod(21): Reading nostruct-align/1eta1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-24822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod (nostruct-align/1eta1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.333828 /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod(21): Reading nostruct-align/1qckA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod (nostruct-align/1qckA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516844 /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod(21): Reading nostruct-align/1fc2C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod (nostruct-align/1fc2C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.167837 /projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod(21): Reading nostruct-align/1fc2D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4629/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod (nostruct-align/1fc2D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.503847 /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod(21): Reading nostruct-align/2at2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-27399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod (nostruct-align/2at2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.297829 /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod(21): Reading nostruct-align/2lbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod (nostruct-align/2lbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.824833 /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod(21): Reading nostruct-align/2sli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-24612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod (nostruct-align/2sli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.206858 /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod(21): Reading nostruct-align/1b6rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod (nostruct-align/1b6rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.021828 /projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod(22): Reading nostruct-align/1ql3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-10044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod (nostruct-align/1ql3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.906843 /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod(21): Reading nostruct-align/1hta.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod (nostruct-align/1hta.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.866861 /projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod(22): Reading nostruct-align/1f00I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod (nostruct-align/1f00I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.717836 /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod(22): Reading nostruct-align/1ajj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26708/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod (nostruct-align/1ajj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.436857 /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod(22): Reading nostruct-align/1jhgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod (nostruct-align/1jhgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.250862 /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod(21): Reading nostruct-align/1cezA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-8668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod (nostruct-align/1cezA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.861874 /projects/compbio/experiments/models.97/pdb/1j/1j5eB/nostruct-align/1j5eB.t2k-w0.5.mod(22): Reading nostruct-align/1j5eB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29066/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5eB/nostruct-align/1j5eB.t2k-w0.5.mod (nostruct-align/1j5eB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5eB/nostruct-align/1j5eB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.503845 /projects/compbio/experiments/models.97/pdb/1j/1j5eC/nostruct-align/1j5eC.t2k-w0.5.mod(22): Reading nostruct-align/1j5eC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5eC/nostruct-align/1j5eC.t2k-w0.5.mod (nostruct-align/1j5eC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5eC/nostruct-align/1j5eC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.399887 /projects/compbio/experiments/models.97/pdb/1l/1lvoA/nostruct-align/1lvoA.t2k-w0.5.mod(22): Reading nostruct-align/1lvoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvoA/nostruct-align/1lvoA.t2k-w0.5.mod (nostruct-align/1lvoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lvoA/nostruct-align/1lvoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.551851 /projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod(22): Reading nostruct-align/1g2aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod (nostruct-align/1g2aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.908838 /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod(21): Reading nostruct-align/1tubA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod (nostruct-align/1tubA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.941837 /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod(21): Reading nostruct-align/2sn3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod (nostruct-align/2sn3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.939842 /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod(22): Reading nostruct-align/1al3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod (nostruct-align/1al3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.642851 /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod(22): Reading nostruct-align/1cmcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod (nostruct-align/1cmcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.667879 /projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod(21): Reading nostruct-align/1yprA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-28757/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod (nostruct-align/1yprA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.642878 /projects/compbio/experiments/models.97/pdb/1j/1j5eK/nostruct-align/1j5eK.t2k-w0.5.mod(22): Reading nostruct-align/1j5eK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5eK/nostruct-align/1j5eK.t2k-w0.5.mod (nostruct-align/1j5eK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5eK/nostruct-align/1j5eK.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.994858 /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod(21): Reading nostruct-align/1htn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-20110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod (nostruct-align/1htn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.831861 /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod(22): Reading nostruct-align/1htp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod (nostruct-align/1htp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.156876 /projects/compbio/experiments/models.97/pdb/1j/1j5eN/nostruct-align/1j5eN.t2k-w0.5.mod(22): Reading nostruct-align/1j5eN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5eN/nostruct-align/1j5eN.t2k-w0.5.mod (nostruct-align/1j5eN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5eN/nostruct-align/1j5eN.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.409849 /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod(22): Reading nostruct-align/1k8uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod (nostruct-align/1k8uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.843857 /projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod(22): Reading nostruct-align/1hhsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod (nostruct-align/1hhsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.730829 /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod(21): Reading nostruct-align/1d6gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod (nostruct-align/1d6gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.531881 /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod(22): Reading nostruct-align/1diiC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod (nostruct-align/1diiC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.176842 /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod(21): Reading nostruct-align/1h5qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod (nostruct-align/1h5qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.857843 /projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod(21): Reading nostruct-align/1fwqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod (nostruct-align/1fwqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.908865 /projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod(21): Reading nostruct-align/1eeoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod (nostruct-align/1eeoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.891867 /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod(21): Reading nostruct-align/1tfpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-22712/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod (nostruct-align/1tfpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.529886 /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod(21): Reading nostruct-align/1etb1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod (nostruct-align/1etb1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.428871 /projects/compbio/experiments/models.97/pdb/1i/1i35A/nostruct-align/1i35A.t2k-w0.5.mod(22): Reading nostruct-align/1i35A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-28977/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i35A/nostruct-align/1i35A.t2k-w0.5.mod (nostruct-align/1i35A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i35A/nostruct-align/1i35A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.039831 /projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod(22): Reading nostruct-align/1fc3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27436/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod (nostruct-align/1fc3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.809834 /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod(22): Reading nostruct-align/1dpsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod (nostruct-align/1dpsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.850836 /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod(21): Reading nostruct-align/1amoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod (nostruct-align/1amoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.149851 /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod(21): Reading nostruct-align/1dpsD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod (nostruct-align/1dpsD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.343863 /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod(21): Reading nostruct-align/1elyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-2837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod (nostruct-align/1elyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.326853 /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod(21): Reading nostruct-align/1en7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12847/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod (nostruct-align/1en7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.608850 /projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod(21): Reading nostruct-align/2oatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod (nostruct-align/2oatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.941866 /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod(21): Reading nostruct-align/1tmzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-1255/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod (nostruct-align/1tmzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.992880 /projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod(22): Reading nostruct-align/1b6sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod (nostruct-align/1b6sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.913870 /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod(22): Reading nostruct-align/2mprA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod (nostruct-align/2mprA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.442835 /projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod(22): Reading nostruct-align/1qjvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod (nostruct-align/1qjvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.396847 /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod(22): Reading nostruct-align/1g2bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28862/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod (nostruct-align/1g2bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.009836 /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod(22): Reading nostruct-align/1ako.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-19862/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod (nostruct-align/1ako.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.750841 /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod(21): Reading nostruct-align/1akr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-25486/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod (nostruct-align/1akr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.081837 /projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod(22): Reading nostruct-align/1jq0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod (nostruct-align/1jq0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.959866 /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod(22): Reading nostruct-align/1am2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod (nostruct-align/1am2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.738848 /projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod(21): Reading nostruct-align/1g9lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25023/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod (nostruct-align/1g9lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.717867 /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod(22): Reading nostruct-align/1vmoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod (nostruct-align/1vmoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.137836 /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod(21): Reading nostruct-align/1aky.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-2920/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod (nostruct-align/1aky.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.559835 /projects/compbio/experiments/models.97/pdb/1k/1k8vA/nostruct-align/1k8vA.t2k-w0.5.mod(22): Reading nostruct-align/1k8vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8vA/nostruct-align/1k8vA.t2k-w0.5.mod (nostruct-align/1k8vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8vA/nostruct-align/1k8vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.113878 /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod(21): Reading nostruct-align/1akz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod (nostruct-align/1akz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.506836 /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod(21): Reading nostruct-align/2hmzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod (nostruct-align/2hmzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.197863 /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod(22): Reading nostruct-align/1h70A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod (nostruct-align/1h70A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.151884 /projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod(21): Reading nostruct-align/1fwrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod (nostruct-align/1fwrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.906830 /projects/compbio/experiments/models.97/pdb/1i/1i36A/nostruct-align/1i36A.t2k-w0.5.mod(22): Reading nostruct-align/1i36A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-28496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i36A/nostruct-align/1i36A.t2k-w0.5.mod (nostruct-align/1i36A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i36A/nostruct-align/1i36A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.782869 /projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod(21): Reading nostruct-align/3aprE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-6251/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod (nostruct-align/3aprE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.318857 /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod(22): Reading nostruct-align/1huw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod (nostruct-align/1huw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.391882 /projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod(22): Reading nostruct-align/1fc4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod (nostruct-align/1fc4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.357866 /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod(21): Reading nostruct-align/1dptA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod (nostruct-align/1dptA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.845835 /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod(22): Reading nostruct-align/1whi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod (nostruct-align/1whi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.284836 /projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod(21): Reading nostruct-align/1e9xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod (nostruct-align/1e9xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.905880 /projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod(22): Reading nostruct-align/1i9aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod (nostruct-align/1i9aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.739872 /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod(22): Reading nostruct-align/1who.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod (nostruct-align/1who.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.603880 /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod(21): Reading nostruct-align/1b6tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod (nostruct-align/1b6tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.315880 /projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod(22): Reading nostruct-align/1kzkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod (nostruct-align/1kzkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.562841 /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod(21): Reading nostruct-align/1qjwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-2116/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod (nostruct-align/1qjwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.878864 /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod(21): Reading nostruct-align/1hvc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod (nostruct-align/1hvc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.828884 /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod(21): Reading nostruct-align/1hvd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod (nostruct-align/1hvd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.692835 /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod(21): Reading nostruct-align/6rxn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-26667/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod (nostruct-align/6rxn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.226883 /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod(21): Reading nostruct-align/1atzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10471/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod (nostruct-align/1atzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.829874 /projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod(22): Reading nostruct-align/1kdoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod (nostruct-align/1kdoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.904837 /projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod(22): Reading nostruct-align/1g2cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod (nostruct-align/1g2cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.484837 /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod(21): Reading nostruct-align/1atzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-7616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod (nostruct-align/1atzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.489883 /projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod(22): Reading nostruct-align/1g2cB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod (nostruct-align/1g2cB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.499846 /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod(21): Reading nostruct-align/1alq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-5970/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod (nostruct-align/1alq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.218859 /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod(22): Reading nostruct-align/2sns.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28053/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod (nostruct-align/2sns.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.453865 /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod(21): Reading nostruct-align/2snv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod (nostruct-align/2snv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.872864 /projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod(22): Reading nostruct-align/1f02T.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod (nostruct-align/1f02T.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.371876 /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod(22): Reading nostruct-align/1alu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod (nostruct-align/1alu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.665867 /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod(21): Reading nostruct-align/1yptA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13502/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod (nostruct-align/1yptA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.698851 /projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod(21): Reading nostruct-align/1g2cI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17611/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod (nostruct-align/1g2cI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.402866 /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod(22): Reading nostruct-align/2rslA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod (nostruct-align/2rslA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.393885 /projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod(21): Reading nostruct-align/1g2cK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod (nostruct-align/1g2cK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.449848 /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod(21): Reading nostruct-align/1aly.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod (nostruct-align/1aly.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.947882 /projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod(22): Reading nostruct-align/1k8wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod (nostruct-align/1k8wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.565859 /projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod(21): Reading nostruct-align/1g2cL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod (nostruct-align/1g2cL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.613886 /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod(21): Reading nostruct-align/1an8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-22177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod (nostruct-align/1an8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.759846 /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod(22): Reading nostruct-align/1bxiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32016/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod (nostruct-align/1bxiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.493847 /projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod(21): Reading nostruct-align/1g2cO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod (nostruct-align/1g2cO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.358885 /projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod(21): Reading nostruct-align/1fwsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod (nostruct-align/1fwsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.206835 /projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod(22): Reading nostruct-align/1eeqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod (nostruct-align/1eeqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.439856 /projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod(22): Reading nostruct-align/1g9mG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-30511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod (nostruct-align/1g9mG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.005846 /projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod(21): Reading nostruct-align/1g2cQ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-1377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod (nostruct-align/1g2cQ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.372845 /projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod(21): Reading nostruct-align/1i37A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod (nostruct-align/1i37A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.025827 /projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod(22): Reading nostruct-align/1qcnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod (nostruct-align/1qcnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.244841 /projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod(21): Reading nostruct-align/1dpuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod (nostruct-align/1dpuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.525839 /projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod(21): Reading nostruct-align/1amb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod (nostruct-align/1amb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.187849 /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod(21): Reading nostruct-align/2ccyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod (nostruct-align/2ccyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.523882 /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod(21): Reading nostruct-align/2ltnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod (nostruct-align/2ltnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.329851 /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod(21): Reading nostruct-align/2ltnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-32492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod (nostruct-align/2ltnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.192860 /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod(21): Reading nostruct-align/1amf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod (nostruct-align/1amf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.886866 /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod(21): Reading nostruct-align/1mknA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod (nostruct-align/1mknA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.476830 /projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod(22): Reading nostruct-align/1i9bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod (nostruct-align/1i9bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.909872 /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod(21): Reading nostruct-align/1bk5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30441/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod (nostruct-align/1bk5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.449884 /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod(21): Reading nostruct-align/2leu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod (nostruct-align/2leu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.086874 /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod(21): Reading nostruct-align/1amj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-25632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod (nostruct-align/1amj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.669836 /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod(22): Reading nostruct-align/1jhjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod (nostruct-align/1jhjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.051840 /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod(21): Reading nostruct-align/1amk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod (nostruct-align/1amk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.032862 /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod(21): Reading nostruct-align/1aml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-11418/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod (nostruct-align/1aml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.225866 /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod(22): Reading nostruct-align/1amm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10533/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod (nostruct-align/1amm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.462883 /projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod(22): Reading nostruct-align/1gefA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29493/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod (nostruct-align/1gefA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.074858 /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod(21): Reading nostruct-align/1wit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-32011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod (nostruct-align/1wit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.028858 /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod(21): Reading nostruct-align/1amp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod (nostruct-align/1amp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.032833 /projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod(21): Reading nostruct-align/1jq2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod (nostruct-align/1jq2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.387842 /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod(21): Reading nostruct-align/1jotA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-3818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod (nostruct-align/1jotA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.638878 /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod(21): Reading nostruct-align/1amx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19633/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod (nostruct-align/1amx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.387877 /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod(21): Reading nostruct-align/2lfb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18971/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod (nostruct-align/2lfb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.340883 /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod(22): Reading nostruct-align/1d6jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3997/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod (nostruct-align/1d6jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.217857 /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod(21): Reading nostruct-align/3ncmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod (nostruct-align/3ncmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.799871 /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod(22): Reading nostruct-align/1eerA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod (nostruct-align/1eerA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.336882 /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod(22): Reading nostruct-align/1h72C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod (nostruct-align/1h72C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.867847 /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod(22): Reading nostruct-align/1eerB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10697/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod (nostruct-align/1eerB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.594847 /projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod(21): Reading nostruct-align/6dfr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod (nostruct-align/6dfr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.727867 /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod(22): Reading nostruct-align/1fc6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9633/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod (nostruct-align/1fc6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.725859 /projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod(21): Reading nostruct-align/1ao0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-27556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod (nostruct-align/1ao0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.767859 /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod(21): Reading nostruct-align/1anf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod (nostruct-align/1anf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.748884 /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod(21): Reading nostruct-align/1bk6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-16188/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod (nostruct-align/1bk6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.932854 /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod(21): Reading nostruct-align/2lh2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod (nostruct-align/2lh2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.835859 /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod(21): Reading nostruct-align/2spo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod (nostruct-align/2spo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.424831 /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod(21): Reading nostruct-align/2azaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod (nostruct-align/2azaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.369865 /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod(21): Reading nostruct-align/1gegA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24715/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod (nostruct-align/1gegA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.540876 /projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod(22): Reading nostruct-align/1eteA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod (nostruct-align/1eteA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.282862 /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod(21): Reading nostruct-align/1ap0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod (nostruct-align/1ap0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.057886 /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod(21): Reading nostruct-align/1fpkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21631/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod (nostruct-align/1fpkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.756868 /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod(21): Reading nostruct-align/1ans.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-26675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod (nostruct-align/1ans.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.276834 /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod(21): Reading nostruct-align/1paa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod (nostruct-align/1paa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.992859 /projects/compbio/experiments/models.97/pdb/1j/1jq3A/nostruct-align/1jq3A.t2k-w0.5.mod(22): Reading nostruct-align/1jq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq3A/nostruct-align/1jq3A.t2k-w0.5.mod (nostruct-align/1jq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jq3A/nostruct-align/1jq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.549860 /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod(22): Reading nostruct-align/1anv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod (nostruct-align/1anv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.411844 /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod(22): Reading nostruct-align/1hxn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod (nostruct-align/1hxn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.706871 /projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod(22): Reading nostruct-align/1g9oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod (nostruct-align/1g9oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.813883 /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod(21): Reading nostruct-align/1ap7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-24527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod (nostruct-align/1ap7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.480883 /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod(21): Reading nostruct-align/1ap8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod (nostruct-align/1ap8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.982832 /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod(21): Reading nostruct-align/1pah.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod (nostruct-align/1pah.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.194864 /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod(21): Reading nostruct-align/1bxkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22743/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod (nostruct-align/1bxkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.275831 /projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod(22): Reading nostruct-align/1fwuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod (nostruct-align/1fwuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.879854 /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod(22): Reading nostruct-align/1h5uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod (nostruct-align/1h5uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.724854 /projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod(21): Reading nostruct-align/1a3gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-398/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod (nostruct-align/1a3gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.015852 /projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod(21): Reading nostruct-align/1eesA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-28638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod (nostruct-align/1eesA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.067871 /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod(22): Reading nostruct-align/1ctqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23284/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod (nostruct-align/1ctqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.937859 /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod(21): Reading nostruct-align/1eesB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod (nostruct-align/1eesB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.476885 /projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod(22): Reading nostruct-align/1gu9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod (nostruct-align/1gu9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.644861 /projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod(21): Reading nostruct-align/1i39A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20447/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod (nostruct-align/1i39A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.722866 /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod(22): Reading nostruct-align/1aoa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod (nostruct-align/1aoa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.514837 /projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod(22): Reading nostruct-align/2tscA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20990/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod (nostruct-align/2tscA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.438875 /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod(21): Reading nostruct-align/1bk7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod (nostruct-align/1bk7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.097837 /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod(21): Reading nostruct-align/1paz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod (nostruct-align/1paz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.231853 /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod(22): Reading nostruct-align/1aol.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod (nostruct-align/1aol.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.781839 /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod(21): Reading nostruct-align/1wkt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod (nostruct-align/1wkt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.847841 /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod(21): Reading nostruct-align/1aoo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-16847/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod (nostruct-align/1aoo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.691885 /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod(22): Reading nostruct-align/1aop.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod (nostruct-align/1aop.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.888851 /projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod(22): Reading nostruct-align/1g2fC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod (nostruct-align/1g2fC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod . Average NLL-Simple NULL score: -31.887888 /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod(21): Reading nostruct-align/2shkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-12588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod (nostruct-align/2shkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.912872 /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod(21): Reading nostruct-align/1sceA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod (nostruct-align/1sceA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.971844 /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod(21): Reading nostruct-align/1bqbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod (nostruct-align/1bqbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.824858 /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod(21): Reading nostruct-align/1pba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod (nostruct-align/1pba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.648836 /projects/compbio/experiments/models.97/pdb/1j/1jq4A/nostruct-align/1jq4A.t2k-w0.5.mod(22): Reading nostruct-align/1jq4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq4A/nostruct-align/1jq4A.t2k-w0.5.mod (nostruct-align/1jq4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jq4A/nostruct-align/1jq4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.670856 /projects/compbio/experiments/models.97/pdb/1g/1gn0A/nostruct-align/1gn0A.t2k-w0.5.mod(22): Reading nostruct-align/1gn0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-26345/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gn0A/nostruct-align/1gn0A.t2k-w0.5.mod (nostruct-align/1gn0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gn0A/nostruct-align/1gn0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.493883 /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod(22): Reading nostruct-align/1pbe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod (nostruct-align/1pbe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.246868 /projects/compbio/experiments/models.97/pdb/1g/1g9pA/nostruct-align/1g9pA.t2k-w0.5.mod(22): Reading nostruct-align/1g9pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9pA/nostruct-align/1g9pA.t2k-w0.5.mod (nostruct-align/1g9pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9pA/nostruct-align/1g9pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.451838 /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod(21): Reading nostruct-align/2lhb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod (nostruct-align/2lhb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.613840 /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod(21): Reading nostruct-align/1aoy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod (nostruct-align/1aoy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.344866 /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod(22): Reading nostruct-align/1hyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod (nostruct-align/1hyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.906872 /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod(21): Reading nostruct-align/3adk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-27394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod (nostruct-align/3adk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.831879 /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod(21): Reading nostruct-align/1hyt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod (nostruct-align/1hyt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.894859 /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod(22): Reading nostruct-align/1eg2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod (nostruct-align/1eg2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.272842 /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod(21): Reading nostruct-align/1rusA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod (nostruct-align/1rusA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.596870 /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod(21): Reading nostruct-align/1pbn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod (nostruct-align/1pbn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.267879 /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod(21): Reading nostruct-align/1bbpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod (nostruct-align/1bbpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.060858 /projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod(22): Reading nostruct-align/1fazA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod (nostruct-align/1fazA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.990871 /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod(21): Reading nostruct-align/1pbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28034/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod (nostruct-align/1pbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.698872 /projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod(22): Reading nostruct-align/1f06A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod (nostruct-align/1f06A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.744888 /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod(21): Reading nostruct-align/1apa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-28720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod (nostruct-align/1apa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.980864 /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod(21): Reading nostruct-align/1jacA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-1760/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod (nostruct-align/1jacA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.048838 /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod(22): Reading nostruct-align/5csmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod (nostruct-align/5csmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.765860 /projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod(21): Reading nostruct-align/1jacC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod (nostruct-align/1jacC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.048838 /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod(21): Reading nostruct-align/2ercA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21235/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod (nostruct-align/2ercA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.609888 /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod(21): Reading nostruct-align/1apf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-31952/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod (nostruct-align/1apf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.186842 /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod(22): Reading nostruct-align/1pbv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3392/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod (nostruct-align/1pbv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.842882 /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod(21): Reading nostruct-align/1apj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25231/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod (nostruct-align/1apj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.706841 /projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod(21): Reading nostruct-align/1f6aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod (nostruct-align/1f6aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.396860 /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod(21): Reading nostruct-align/1apo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-12911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod (nostruct-align/1apo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.026863 /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod(21): Reading nostruct-align/1apq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod (nostruct-align/1apq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.146883 /projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod(22): Reading nostruct-align/1scfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31223/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod (nostruct-align/1scfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.287874 /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod(21): Reading nostruct-align/1bqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod (nostruct-align/1bqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.637829 /projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod(21): Reading nostruct-align/1qrdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod (nostruct-align/1qrdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.455873 /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod(21): Reading nostruct-align/1aps.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod (nostruct-align/1aps.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.100880 /projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod(22): Reading nostruct-align/1jq5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod (nostruct-align/1jq5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.322861 /projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod(22): Reading nostruct-align/1cmiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-379/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod (nostruct-align/1cmiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.466835 /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod(21): Reading nostruct-align/2rspA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-2003/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod (nostruct-align/2rspA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.999838 /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod(21): Reading nostruct-align/1pce.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-32151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod (nostruct-align/1pce.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.509872 /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod(21): Reading nostruct-align/2rspB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod (nostruct-align/2rspB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.164885 /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod(21): Reading nostruct-align/1dioA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-20267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod (nostruct-align/1dioA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.474876 /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod(21): Reading nostruct-align/1pch.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod (nostruct-align/1pch.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.794847 /projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod(21): Reading nostruct-align/1d6mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod (nostruct-align/1d6mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.088852 /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod(21): Reading nostruct-align/1dioB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1195/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod (nostruct-align/1dioB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.913832 /projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod(22): Reading nostruct-align/1h5wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod (nostruct-align/1h5wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.656830 /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod(22): Reading nostruct-align/1h75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod (nostruct-align/1h75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.102840 /projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod(21): Reading nostruct-align/1eeuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod (nostruct-align/1eeuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.188885 /projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod(22): Reading nostruct-align/1eg3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-9036/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod (nostruct-align/1eg3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.988859 /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod(21): Reading nostruct-align/1pcl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod (nostruct-align/1pcl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.107861 /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod(21): Reading nostruct-align/1dioG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod (nostruct-align/1dioG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.930878 /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod(21): Reading nostruct-align/2u1a.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-26639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod (nostruct-align/2u1a.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.198887 /projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod(21): Reading nostruct-align/2minA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-23744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod (nostruct-align/2minA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.396835 /projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod(21): Reading nostruct-align/2minB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod (nostruct-align/2minB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.148869 /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod(21): Reading nostruct-align/1qcrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7562/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod (nostruct-align/1qcrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.769838 /projects/compbio/experiments/models.97/pdb/1f/1f07A/nostruct-align/1f07A.t2k-w0.5.mod(22): Reading nostruct-align/1f07A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f07A/nostruct-align/1f07A.t2k-w0.5.mod (nostruct-align/1f07A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f07A/nostruct-align/1f07A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.626863 /projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod(22): Reading nostruct-align/1jadA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod (nostruct-align/1jadA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.362888 /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod(21): Reading nostruct-align/1qcrC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-15232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod (nostruct-align/1qcrC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.296875 /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod(22): Reading nostruct-align/1aqb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod (nostruct-align/1aqb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.101843 /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod(21): Reading nostruct-align/1qcrD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-7003/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod (nostruct-align/1qcrD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.178869 /projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod(21): Reading nostruct-align/1pcs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod (nostruct-align/1pcs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.514879 /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod(22): Reading nostruct-align/1amuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-10430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod (nostruct-align/1amuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.407846 /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod(21): Reading nostruct-align/1qcrF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod (nostruct-align/1qcrF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.509836 /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod(21): Reading nostruct-align/1qcrG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod (nostruct-align/1qcrG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.084835 /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod(21): Reading nostruct-align/1qcrH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22990/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod (nostruct-align/1qcrH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.668873 /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod(21): Reading nostruct-align/1qcrJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod (nostruct-align/1qcrJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.698856 /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod(21): Reading nostruct-align/1b87A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod (nostruct-align/1b87A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.893881 /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod(22): Reading nostruct-align/1f6bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod (nostruct-align/1f6bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.125885 /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod(22): Reading nostruct-align/2liv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12311/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod (nostruct-align/2liv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.782854 /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod(21): Reading nostruct-align/1qcrK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11065/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod (nostruct-align/1qcrK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.594849 /projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod(22): Reading nostruct-align/1jhnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod (nostruct-align/1jhnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.906876 /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod(21): Reading nostruct-align/1aqm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-4631/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod (nostruct-align/1aqm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.783878 /projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod(21): Reading nostruct-align/1g2hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod (nostruct-align/1g2hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.834856 /projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod(22): Reading nostruct-align/1dbfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod (nostruct-align/1dbfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.577831 /projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod(22): Reading nostruct-align/1k30A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod (nostruct-align/1k30A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.313862 /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod(22): Reading nostruct-align/1qreA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod (nostruct-align/1qreA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.330862 /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod(22): Reading nostruct-align/1pda.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod (nostruct-align/1pda.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.679846 /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod(21): Reading nostruct-align/1aqt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod (nostruct-align/1aqt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.812832 /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod(21): Reading nostruct-align/1pdc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod (nostruct-align/1pdc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.031862 /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod(21): Reading nostruct-align/1dipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod (nostruct-align/1dipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.625872 /projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod(22): Reading nostruct-align/1hj8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod (nostruct-align/1hj8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.693884 /projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod(21): Reading nostruct-align/1bxnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod (nostruct-align/1bxnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.181829 /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod(21): Reading nostruct-align/1dipB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod (nostruct-align/1dipB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.625872 /projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod(22): Reading nostruct-align/1fwxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21581/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod (nostruct-align/1fwxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.428837 /projects/compbio/experiments/models.97/pdb/1l/1l5aA/nostruct-align/1l5aA.t2k-w0.5.mod(22): Reading nostruct-align/1l5aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l5aA/nostruct-align/1l5aA.t2k-w0.5.mod (nostruct-align/1l5aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l5aA/nostruct-align/1l5aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.469868 /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod(22): Reading nostruct-align/4eugA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod (nostruct-align/4eugA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.562872 /projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod(21): Reading nostruct-align/1cv2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2440/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod (nostruct-align/1cv2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.872852 /projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod(22): Reading nostruct-align/1e2tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod (nostruct-align/1e2tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.222885 /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod(21): Reading nostruct-align/1e42A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod (nostruct-align/1e42A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.509863 /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod(21): Reading nostruct-align/1mdiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod (nostruct-align/1mdiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.039858 /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod(22): Reading nostruct-align/1bd0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod (nostruct-align/1bd0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.960835 /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod(22): Reading nostruct-align/1qcsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod (nostruct-align/1qcsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.933876 /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod(21): Reading nostruct-align/1pdo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-27573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod (nostruct-align/1pdo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.684889 /projects/compbio/experiments/models.97/pdb/1k/1ksgB/nostruct-align/1ksgB.t2k-w0.5.mod(22): Reading nostruct-align/1ksgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksgB/nostruct-align/1ksgB.t2k-w0.5.mod (nostruct-align/1ksgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ksgB/nostruct-align/1ksgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.794876 /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod(21): Reading nostruct-align/2std.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7453/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod (nostruct-align/2std.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.469873 /projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod(22): Reading nostruct-align/1f08A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod (nostruct-align/1f08A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.907846 /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod(22): Reading nostruct-align/1arb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod (nostruct-align/1arb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.006853 /projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod(22): Reading nostruct-align/1hpcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19093/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod (nostruct-align/1hpcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.154884 /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod(21): Reading nostruct-align/1pdr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod (nostruct-align/1pdr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.352837 /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod(21): Reading nostruct-align/1dr8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7526/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod (nostruct-align/1dr8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.267836 /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod(21): Reading nostruct-align/1ard.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-31553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod (nostruct-align/1ard.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.527855 /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod(21): Reading nostruct-align/2bi6H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod (nostruct-align/2bi6H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.951832 /projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod(22): Reading nostruct-align/1i9gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod (nostruct-align/1i9gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.578846 /projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod(22): Reading nostruct-align/1pdz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod (nostruct-align/1pdz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.962830 /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod(21): Reading nostruct-align/1ark.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod (nostruct-align/1ark.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.148882 /projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod(22): Reading nostruct-align/1g2iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod (nostruct-align/1g2iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.482832 /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod(22): Reading nostruct-align/1dbgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod (nostruct-align/1dbgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.400858 /projects/compbio/experiments/models.97/pdb/1i/1iu1A/nostruct-align/1iu1A.t2k-w0.5.mod(22): Reading nostruct-align/1iu1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iu1A/nostruct-align/1iu1A.t2k-w0.5.mod (nostruct-align/1iu1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iu1A/nostruct-align/1iu1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.519831 /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod(22): Reading nostruct-align/1at0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod (nostruct-align/1at0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.995871 /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod(22): Reading nostruct-align/1ars.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod (nostruct-align/1ars.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.925827 /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod(22): Reading nostruct-align/1fpoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12410/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod (nostruct-align/1fpoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.926836 /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod(22): Reading nostruct-align/1pea.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod (nostruct-align/1pea.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.087875 /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod(22): Reading nostruct-align/1art.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod (nostruct-align/1art.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.873850 /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod(22): Reading nostruct-align/2stv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod (nostruct-align/2stv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.924866 /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod(21): Reading nostruct-align/1joyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod (nostruct-align/1joyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.534883 /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod(22): Reading nostruct-align/1aru.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod (nostruct-align/1aru.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.099884 /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod(21): Reading nostruct-align/1arv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod (nostruct-align/1arv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.223848 /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod(21): Reading nostruct-align/1c25.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28798/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod (nostruct-align/1c25.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.335880 /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod(21): Reading nostruct-align/1cmkE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-30044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod (nostruct-align/1cmkE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.413843 /projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod(22): Reading nostruct-align/1hj9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod (nostruct-align/1hj9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.741863 /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod(21): Reading nostruct-align/1peh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-749/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod (nostruct-align/1peh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.111864 /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod(22): Reading nostruct-align/1bxoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1689/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod (nostruct-align/1bxoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.234865 /projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod(21): Reading nostruct-align/1pei.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod (nostruct-align/1pei.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.228882 /projects/compbio/experiments/models.97/pdb/1h/1h77A/nostruct-align/1h77A.t2k-w0.5.mod(22): Reading nostruct-align/1h77A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9501/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h77A/nostruct-align/1h77A.t2k-w0.5.mod (nostruct-align/1h77A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h77A/nostruct-align/1h77A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.228867 /projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod(22): Reading nostruct-align/1fy7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod (nostruct-align/1fy7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.209856 /projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod(21): Reading nostruct-align/1fwyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod (nostruct-align/1fwyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.540848 /projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod(22): Reading nostruct-align/1eg5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-28380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod (nostruct-align/1eg5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.255842 /projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod(22): Reading nostruct-align/1e2uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12262/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod (nostruct-align/1e2uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.411842 /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod(21): Reading nostruct-align/1e43A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod (nostruct-align/1e43A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.290876 /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod(21): Reading nostruct-align/1wod.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod (nostruct-align/1wod.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.853840 /projects/compbio/experiments/models.97/pdb/1k/1kshA/nostruct-align/1kshA.t2k-w0.5.mod(22): Reading nostruct-align/1kshA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kshA/nostruct-align/1kshA.t2k-w0.5.mod (nostruct-align/1kshA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kshA/nostruct-align/1kshA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.162876 /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k-w0.5.mod(22): Reading nostruct-align/1kshB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k-w0.5.mod (nostruct-align/1kshB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.047873 /projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod(21): Reading nostruct-align/1dr9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod (nostruct-align/1dr9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.314880 /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod(22): Reading nostruct-align/1ash.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod (nostruct-align/1ash.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.095873 /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod(21): Reading nostruct-align/1pex.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7244/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod (nostruct-align/1pex.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.068861 /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod(22): Reading nostruct-align/1b89A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2440/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod (nostruct-align/1b89A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.735863 /projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod(22): Reading nostruct-align/1f6dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod (nostruct-align/1f6dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.960831 /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod(21): Reading nostruct-align/3pcgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-9415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod (nostruct-align/3pcgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.159834 /projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod(21): Reading nostruct-align/1pvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod (nostruct-align/1pvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.959864 /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod(21): Reading nostruct-align/1bbt1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod (nostruct-align/1bbt1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.952875 /projects/compbio/experiments/models.97/pdb/1k/1k1tA/nostruct-align/1k1tA.t2k-w0.5.mod(22): Reading nostruct-align/1k1tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1tA/nostruct-align/1k1tA.t2k-w0.5.mod (nostruct-align/1k1tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1tA/nostruct-align/1k1tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.685867 /projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod(22): Reading nostruct-align/1k32A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-31699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod (nostruct-align/1k32A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.815865 /projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod(22): Reading nostruct-align/1dbhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod (nostruct-align/1dbhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.210876 /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod(21): Reading nostruct-align/1bbt3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-21456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod (nostruct-align/1bbt3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.240847 /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod(22): Reading nostruct-align/1ass.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod (nostruct-align/1ass.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.657873 /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod(21): Reading nostruct-align/1ast.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod (nostruct-align/1ast.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.824884 /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod(21): Reading nostruct-align/1asu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3984/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod (nostruct-align/1asu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.529848 /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod(21): Reading nostruct-align/3pcgM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-2570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod (nostruct-align/3pcgM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.499870 /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod(21): Reading nostruct-align/1asx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-29911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod (nostruct-align/1asx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.531866 /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod(22): Reading nostruct-align/1dk0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod (nostruct-align/1dk0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.282850 /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod(22): Reading nostruct-align/2ebn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10043/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod (nostruct-align/2ebn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.860834 /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod(21): Reading nostruct-align/1eexA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod (nostruct-align/1eexA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.718880 /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod(22): Reading nostruct-align/1eexB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod (nostruct-align/1eexB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.217886 /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod(21): Reading nostruct-align/1ieaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod (nostruct-align/1ieaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.296829 /projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod(22): Reading nostruct-align/1e44B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod (nostruct-align/1e44B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.004862 /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod(22): Reading nostruct-align/1qe3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11710/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod (nostruct-align/1qe3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.890841 /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod(22): Reading nostruct-align/1pfo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod (nostruct-align/1pfo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.879827 /projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod(22): Reading nostruct-align/1ksiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod (nostruct-align/1ksiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.942829 /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod(21): Reading nostruct-align/1b10A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-18126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod (nostruct-align/1b10A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.967884 /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod(22): Reading nostruct-align/1ksiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-10471/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod (nostruct-align/1ksiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.383884 /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod(21): Reading nostruct-align/1ata.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25769/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod (nostruct-align/1ata.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.386885 /projects/compbio/experiments/models.97/pdb/1j/1jagA/nostruct-align/1jagA.t2k-w0.5.mod(22): Reading nostruct-align/1jagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jagA/nostruct-align/1jagA.t2k-w0.5.mod (nostruct-align/1jagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jagA/nostruct-align/1jagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.376875 /projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod(21): Reading nostruct-align/1bd2D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod (nostruct-align/1bd2D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.056856 /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod(22): Reading nostruct-align/1eexG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod (nostruct-align/1eexG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.013866 /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod(21): Reading nostruct-align/1a3lH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-16928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod (nostruct-align/1a3lH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.858870 /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod(21): Reading nostruct-align/1ao6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-20803/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod (nostruct-align/1ao6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.621834 /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod(21): Reading nostruct-align/1pft.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13722/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod (nostruct-align/1pft.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.646849 /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod(21): Reading nostruct-align/1a3lL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod (nostruct-align/1a3lL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.954849 /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod(22): Reading nostruct-align/1atg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod (nostruct-align/1atg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.687838 /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod(22): Reading nostruct-align/1dxeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27397/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod (nostruct-align/1dxeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.709883 /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod(21): Reading nostruct-align/3pchA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod (nostruct-align/3pchA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.201887 /projects/compbio/experiments/models.97/pdb/1l/1lx7A/nostruct-align/1lx7A.t2k-w0.5.mod(22): Reading nostruct-align/1lx7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lx7A/nostruct-align/1lx7A.t2k-w0.5.mod (nostruct-align/1lx7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lx7A/nostruct-align/1lx7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.778866 /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod(22): Reading nostruct-align/1isuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod (nostruct-align/1isuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.660862 /projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod(21): Reading nostruct-align/1dbiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod (nostruct-align/1dbiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.250834 /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod(21): Reading nostruct-align/2shpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-2377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod (nostruct-align/2shpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.385851 /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod(22): Reading nostruct-align/1scjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5144/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod (nostruct-align/1scjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.049835 /projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod(22): Reading nostruct-align/1fpqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod (nostruct-align/1fpqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.212854 /projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod(22): Reading nostruct-align/1av3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-24326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod (nostruct-align/1av3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.143873 /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod(21): Reading nostruct-align/2ech.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod (nostruct-align/2ech.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.291859 /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod(21): Reading nostruct-align/3pchM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod (nostruct-align/3pchM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.507849 /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod(21): Reading nostruct-align/1atx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19541/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod (nostruct-align/1atx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.779879 /projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod(22): Reading nostruct-align/1g9uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod (nostruct-align/1g9uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -35.853855 /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod(21): Reading nostruct-align/3aig.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod (nostruct-align/3aig.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.977850 /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod(21): Reading nostruct-align/1aty.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod (nostruct-align/1aty.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.483833 /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod(21): Reading nostruct-align/7ahlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-8561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod (nostruct-align/7ahlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.811874 /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod(21): Reading nostruct-align/1afoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod (nostruct-align/1afoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.944859 /projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod(22): Reading nostruct-align/1eg7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod (nostruct-align/1eg7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.371864 /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod(21): Reading nostruct-align/1e2wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod (nostruct-align/1e2wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.737879 /projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod(22): Reading nostruct-align/1ruxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod (nostruct-align/1ruxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.171875 /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod(22): Reading nostruct-align/1pvc1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod (nostruct-align/1pvc1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.040834 /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod(22): Reading nostruct-align/1bd3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod (nostruct-align/1bd3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.758842 /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod(21): Reading nostruct-align/1pvc2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod (nostruct-align/1pvc2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.912874 /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod(21): Reading nostruct-align/1pvc3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod (nostruct-align/1pvc3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.618885 /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod(22): Reading nostruct-align/1aua.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod (nostruct-align/1aua.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.946857 /projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod(22): Reading nostruct-align/1ortA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23988/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod (nostruct-align/1ortA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.943848 /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod(21): Reading nostruct-align/1pvc4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod (nostruct-align/1pvc4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.289879 /projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod(21): Reading nostruct-align/3ait.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-17868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod (nostruct-align/3ait.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.950878 /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod(22): Reading nostruct-align/1pgs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod (nostruct-align/1pgs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.768845 /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod(21): Reading nostruct-align/1lopA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod (nostruct-align/1lopA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.296875 /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod(21): Reading nostruct-align/1c3d.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod (nostruct-align/1c3d.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.046860 /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod(21): Reading nostruct-align/1pi2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod (nostruct-align/1pi2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.215887 /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod(21): Reading nostruct-align/4lbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21382/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod (nostruct-align/4lbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.235830 /projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod(21): Reading nostruct-align/1f6fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod (nostruct-align/1f6fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.104887 /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod(22): Reading nostruct-align/1auk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30621/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod (nostruct-align/1auk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.535889 /projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod(22): Reading nostruct-align/1f6fB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod (nostruct-align/1f6fB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.171843 /projects/compbio/experiments/models.97/pdb/1j/1j5pA/nostruct-align/1j5pA.t2k-w0.5.mod(22): Reading nostruct-align/1j5pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-20132/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5pA/nostruct-align/1j5pA.t2k-w0.5.mod (nostruct-align/1j5pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5pA/nostruct-align/1j5pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.978846 /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod(22): Reading nostruct-align/1rgeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod (nostruct-align/1rgeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479872 /projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod(21): Reading nostruct-align/1aun.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28478/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod (nostruct-align/1aun.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.613857 /projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod(22): Reading nostruct-align/1g2lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod (nostruct-align/1g2lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.098839 /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod(21): Reading nostruct-align/1kdxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod (nostruct-align/1kdxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.834843 /projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod(22): Reading nostruct-align/1kf6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod (nostruct-align/1kf6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.588877 /projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod(22): Reading nostruct-align/1kdxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod (nostruct-align/1kdxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.900837 /projects/compbio/experiments/models.97/pdb/1k/1k1vA/nostruct-align/1k1vA.t2k-w0.5.mod(22): Reading nostruct-align/1k1vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1vA/nostruct-align/1k1vA.t2k-w0.5.mod (nostruct-align/1k1vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k1vA/nostruct-align/1k1vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.398869 /projects/compbio/experiments/models.97/pdb/1k/1kf6C/nostruct-align/1kf6C.t2k-w0.5.mod(22): Reading nostruct-align/1kf6C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kf6C/nostruct-align/1kf6C.t2k-w0.5.mod (nostruct-align/1kf6C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kf6C/nostruct-align/1kf6C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.308846 /projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod(21): Reading nostruct-align/1k34A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18689/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod (nostruct-align/1k34A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.627832 /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod(21): Reading nostruct-align/1auq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-20588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod (nostruct-align/1auq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.076845 /projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod(22): Reading nostruct-align/1kf6D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod (nostruct-align/1kf6D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.201872 /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod(21): Reading nostruct-align/1aw0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod (nostruct-align/1aw0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.993835 /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod(22): Reading nostruct-align/1c52.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod (nostruct-align/1c52.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.188860 /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod(21): Reading nostruct-align/1phb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24183/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod (nostruct-align/1phb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.334881 /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod(21): Reading nostruct-align/1c53.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod (nostruct-align/1c53.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.376881 /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod(21): Reading nostruct-align/1cmnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-21770/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod (nostruct-align/1cmnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.999832 /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod(21): Reading nostruct-align/1phd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod (nostruct-align/1phd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.142855 /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod(22): Reading nostruct-align/1aw5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-4782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod (nostruct-align/1aw5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.208885 /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod(22): Reading nostruct-align/1bqhG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-1955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod (nostruct-align/1bqhG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.434866 /projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod(21): Reading nostruct-align/1aw6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod (nostruct-align/1aw6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.651888 /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod(21): Reading nostruct-align/4sli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod (nostruct-align/4sli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.671862 /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod(21): Reading nostruct-align/1phg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-30055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod (nostruct-align/1phg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.363873 /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod(21): Reading nostruct-align/1bxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod (nostruct-align/1bxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.332872 /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod(21): Reading nostruct-align/1auz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod (nostruct-align/1auz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.836847 /projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod(21): Reading nostruct-align/1aw9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod (nostruct-align/1aw9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.642860 /projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod(21): Reading nostruct-align/1phk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-12712/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod (nostruct-align/1phk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.029839 /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod(22): Reading nostruct-align/1phm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11861/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod (nostruct-align/1phm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.630846 /projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod(21): Reading nostruct-align/1e2xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod (nostruct-align/1e2xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.382856 /projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod(22): Reading nostruct-align/1kskA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod (nostruct-align/1kskA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.407829 /projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod(21): Reading nostruct-align/1qe5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-5248/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod (nostruct-align/1qe5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.702860 /projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod(21): Reading nostruct-align/1qcwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod (nostruct-align/1qcwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.868847 /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod(22): Reading nostruct-align/1b12A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod (nostruct-align/1b12A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.354841 /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod(21): Reading nostruct-align/1php.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27880/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod (nostruct-align/1php.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.859886 /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod(21): Reading nostruct-align/1phr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod (nostruct-align/1phr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.951881 /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod(21): Reading nostruct-align/1hpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod (nostruct-align/1hpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.813831 /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod(21): Reading nostruct-align/1avc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-4269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod (nostruct-align/1avc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.114857 /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod(22): Reading nostruct-align/1pht.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6486/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod (nostruct-align/1pht.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.176840 /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod(22): Reading nostruct-align/1kzuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod (nostruct-align/1kzuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.317860 /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod(21): Reading nostruct-align/2sxl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-32013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod (nostruct-align/2sxl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.074848 /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod(22): Reading nostruct-align/1kzuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod (nostruct-align/1kzuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.626856 /projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod(21): Reading nostruct-align/1avk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26144/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod (nostruct-align/1avk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.239885 /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod(22): Reading nostruct-align/1dxgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod (nostruct-align/1dxgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.069841 /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod(21): Reading nostruct-align/2nmbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16425/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod (nostruct-align/2nmbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.013878 /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod(22): Reading nostruct-align/1c3cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod (nostruct-align/1c3cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.077871 /projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod(22): Reading nostruct-align/1pvdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24575/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod (nostruct-align/1pvdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.606878 /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod(21): Reading nostruct-align/1ax0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30172/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod (nostruct-align/1ax0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.880863 /projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod(21): Reading nostruct-align/1fr1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod (nostruct-align/1fr1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.286879 /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod(22): Reading nostruct-align/2admA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod (nostruct-align/2admA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.115839 /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod(21): Reading nostruct-align/1qrjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod (nostruct-align/1qrjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.929865 /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod(21): Reading nostruct-align/1cmoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-5570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod (nostruct-align/1cmoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.931850 /projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod(21): Reading nostruct-align/1pih.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod (nostruct-align/1pih.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.777840 /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod(22): Reading nostruct-align/1ax8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod (nostruct-align/1ax8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.906879 /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod(21): Reading nostruct-align/1pii.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod (nostruct-align/1pii.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.828844 /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod(21): Reading nostruct-align/1pij.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod (nostruct-align/1pij.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.760857 /projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod(22): Reading nostruct-align/1jj21.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod (nostruct-align/1jj21.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.634853 /projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod(22): Reading nostruct-align/1jj22.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod (nostruct-align/1jj22.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.353859 /projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod(22): Reading nostruct-align/1eg9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod (nostruct-align/1eg9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.875845 /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod(21): Reading nostruct-align/1pil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod (nostruct-align/1pil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.827887 /projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod(22): Reading nostruct-align/1eg9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25858/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod (nostruct-align/1eg9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.516886 /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod(22): Reading nostruct-align/1qcxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod (nostruct-align/1qcxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.376877 /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod(21): Reading nostruct-align/1c5a.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod (nostruct-align/1c5a.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.877874 /projects/compbio/experiments/models.97/pdb/1j/1jajA/nostruct-align/1jajA.t2k-w0.5.mod(22): Reading nostruct-align/1jajA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24508/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jajA/nostruct-align/1jajA.t2k-w0.5.mod (nostruct-align/1jajA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jajA/nostruct-align/1jajA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.093863 /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod(21): Reading nostruct-align/1awd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod (nostruct-align/1awd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.416855 /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod(21): Reading nostruct-align/1awe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod (nostruct-align/1awe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.352858 /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod(21): Reading nostruct-align/1pk4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod (nostruct-align/1pk4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.618879 /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod(21): Reading nostruct-align/1awj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod (nostruct-align/1awj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.291878 /projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod(22): Reading nostruct-align/1jj2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod (nostruct-align/1jj2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.880880 /projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod(22): Reading nostruct-align/1jj2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21906/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod (nostruct-align/1jj2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.369854 /projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod(21): Reading nostruct-align/1jj2C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod (nostruct-align/1jj2C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.191847 /projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod(21): Reading nostruct-align/1hy0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-10817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod (nostruct-align/1hy0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.180872 /projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod(22): Reading nostruct-align/1jj2D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod (nostruct-align/1jj2D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.903835 /projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod(21): Reading nostruct-align/1jj2E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12465/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod (nostruct-align/1jj2E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.673885 /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod(21): Reading nostruct-align/1g2nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod (nostruct-align/1g2nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.181871 /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod(21): Reading nostruct-align/1awo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-8424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod (nostruct-align/1awo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.118830 /projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod(22): Reading nostruct-align/1jj2F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod (nostruct-align/1jj2F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.494883 /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod(21): Reading nostruct-align/1scmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-3564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod (nostruct-align/1scmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.564833 /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod(21): Reading nostruct-align/1msaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-6175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod (nostruct-align/1msaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.277853 /projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod(22): Reading nostruct-align/1jj2H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod (nostruct-align/1jj2H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.392887 /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod(21): Reading nostruct-align/1havA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod (nostruct-align/1havA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.622835 /projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod(21): Reading nostruct-align/12e8L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2322/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod (nostruct-align/12e8L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.131863 /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod(21): Reading nostruct-align/1scmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1195/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod (nostruct-align/1scmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.076859 /projects/compbio/experiments/models.97/pdb/1q/1qrkA/nostruct-align/1qrkA.t2k-w0.5.mod(22): Reading nostruct-align/1qrkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrkA/nostruct-align/1qrkA.t2k-w0.5.mod (nostruct-align/1qrkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrkA/nostruct-align/1qrkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.322849 /projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod(22): Reading nostruct-align/1jj2I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod (nostruct-align/1jj2I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.506886 /projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod(21): Reading nostruct-align/1ay2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-19800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod (nostruct-align/1ay2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.901880 /projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod(21): Reading nostruct-align/8tfvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14356/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod (nostruct-align/8tfvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.102833 /projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod(22): Reading nostruct-align/1jj2K.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod (nostruct-align/1jj2K.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.492830 /projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod(22): Reading nostruct-align/1jj2L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod (nostruct-align/1jj2L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.630865 /projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod(22): Reading nostruct-align/1jj2M.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod (nostruct-align/1jj2M.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.183887 /projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod(22): Reading nostruct-align/1jj2N.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod (nostruct-align/1jj2N.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.297838 /projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod(22): Reading nostruct-align/1jj2O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod (nostruct-align/1jj2O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.927828 /projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod(21): Reading nostruct-align/1dk4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod (nostruct-align/1dk4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.376844 /projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod(22): Reading nostruct-align/1jj2P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27311/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod (nostruct-align/1jj2P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.074856 /projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod(22): Reading nostruct-align/1jj2Q.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod (nostruct-align/1jj2Q.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.909834 /projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod(22): Reading nostruct-align/1jj2R.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21630/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod (nostruct-align/1jj2R.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.351873 /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod(22): Reading nostruct-align/1afrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod (nostruct-align/1afrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.567886 /projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod(22): Reading nostruct-align/1jwgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod (nostruct-align/1jwgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.042847 /projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod(22): Reading nostruct-align/1jj2S.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod (nostruct-align/1jj2S.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.819887 /projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod(22): Reading nostruct-align/1jj2T.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod (nostruct-align/1jj2T.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.901836 /projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod(22): Reading nostruct-align/1jj2U.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod (nostruct-align/1jj2U.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.188837 /projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod(22): Reading nostruct-align/1jj2V.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod (nostruct-align/1jj2V.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.268879 /projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod(22): Reading nostruct-align/1jj2W.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8188/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod (nostruct-align/1jj2W.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.479847 /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod(21): Reading nostruct-align/1fbaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-29093/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod (nostruct-align/1fbaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.864874 /projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod(22): Reading nostruct-align/1jj2X.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod (nostruct-align/1jj2X.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.929886 /projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod(22): Reading nostruct-align/1jj2Y.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod (nostruct-align/1jj2Y.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.945845 /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod(22): Reading nostruct-align/1jakA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30788/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod (nostruct-align/1jakA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.523834 /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod(22): Reading nostruct-align/1pjr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod (nostruct-align/1pjr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.742865 /projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod(22): Reading nostruct-align/1jj2Z.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13934/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod (nostruct-align/1jj2Z.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.406876 /projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod(21): Reading nostruct-align/2or1L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-3220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod (nostruct-align/2or1L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.635847 /projects/compbio/experiments/models.97/pdb/1i/1iloA/nostruct-align/1iloA.t2k-w0.5.mod(22): Reading nostruct-align/1iloA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-26650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iloA/nostruct-align/1iloA.t2k-w0.5.mod (nostruct-align/1iloA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iloA/nostruct-align/1iloA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.183851 /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod(22): Reading nostruct-align/1tnfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod (nostruct-align/1tnfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479866 /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod(22): Reading nostruct-align/1bjaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod (nostruct-align/1bjaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.593884 /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod(21): Reading nostruct-align/1axh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-3664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod (nostruct-align/1axh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.767870 /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod(21): Reading nostruct-align/1axj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod (nostruct-align/1axj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.260838 /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod(22): Reading nostruct-align/1iab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod (nostruct-align/1iab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.679876 /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod(21): Reading nostruct-align/1j71A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod (nostruct-align/1j71A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.470863 /projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod(21): Reading nostruct-align/1geqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-9187/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod (nostruct-align/1geqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.545872 /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod(22): Reading nostruct-align/1axn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod (nostruct-align/1axn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.303846 /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod(21): Reading nostruct-align/1iae.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-9805/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod (nostruct-align/1iae.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.726837 /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod(21): Reading nostruct-align/1g2oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod (nostruct-align/1g2oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.307869 /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod(21): Reading nostruct-align/1vfrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1750/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod (nostruct-align/1vfrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.866865 /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod(22): Reading nostruct-align/1tupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28917/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod (nostruct-align/1tupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.473871 /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod(22): Reading nostruct-align/1fr3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod (nostruct-align/1fr3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.121840 /projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod(21): Reading nostruct-align/1iam.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-3647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod (nostruct-align/1iam.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.231833 /projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod(21): Reading nostruct-align/1dk5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-28130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod (nostruct-align/1dk5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.399849 /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod(21): Reading nostruct-align/1az9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-11148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod (nostruct-align/1az9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.022856 /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod(22): Reading nostruct-align/1zmeC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod (nostruct-align/1zmeC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.926870 /projects/compbio/experiments/models.97/pdb/1j/1jwhA/nostruct-align/1jwhA.t2k-w0.5.mod(22): Reading nostruct-align/1jwhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21122/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwhA/nostruct-align/1jwhA.t2k-w0.5.mod (nostruct-align/1jwhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jwhA/nostruct-align/1jwhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.375860 /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod(21): Reading nostruct-align/1pgtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod (nostruct-align/1pgtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.615839 /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod(21): Reading nostruct-align/1a3qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod (nostruct-align/1a3qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.986866 /projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod(22): Reading nostruct-align/1pkn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod (nostruct-align/1pkn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.697866 /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod(22): Reading nostruct-align/1qczA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod (nostruct-align/1qczA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.818884 /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod(22): Reading nostruct-align/1pkp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod (nostruct-align/1pkp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.541853 /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod(21): Reading nostruct-align/1aye.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod (nostruct-align/1aye.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.694872 /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod(21): Reading nostruct-align/1iba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-6638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod (nostruct-align/1iba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.037882 /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod(22): Reading nostruct-align/1ayj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-21793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod (nostruct-align/1ayj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.291855 /projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod(21): Reading nostruct-align/1dxjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-22978/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod (nostruct-align/1dxjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.636862 /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod(22): Reading nostruct-align/1ayl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4049/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod (nostruct-align/1ayl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.985886 /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod(21): Reading nostruct-align/1hwtC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-10493/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod (nostruct-align/1hwtC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.238863 /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod(21): Reading nostruct-align/1etpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod (nostruct-align/1etpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.332872 /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod(22): Reading nostruct-align/1iu8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21568/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod (nostruct-align/1iu8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.432844 /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod(21): Reading nostruct-align/8dfr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-24411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod (nostruct-align/8dfr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.448830 /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod(21): Reading nostruct-align/1plc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod (nostruct-align/1plc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.388872 /projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod(22): Reading nostruct-align/1g9zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod (nostruct-align/1g9zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.289860 /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod(21): Reading nostruct-align/1ayx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29243/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod (nostruct-align/1ayx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.542875 /projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod(21): Reading nostruct-align/1dixA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-16183/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod (nostruct-align/1dixA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.554878 /projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod(21): Reading nostruct-align/1bz4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod (nostruct-align/1bz4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.718838 /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod(21): Reading nostruct-align/1bxvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26108/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod (nostruct-align/1bxvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.616877 /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod(21): Reading nostruct-align/1wjbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod (nostruct-align/1wjbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.595865 /projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod(22): Reading nostruct-align/1jwiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod (nostruct-align/1jwiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.697840 /projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod(22): Reading nostruct-align/1jwiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod (nostruct-align/1jwiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.790848 /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod(22): Reading nostruct-align/1gteA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod (nostruct-align/1gteA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.315887 /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod(22): Reading nostruct-align/1bbzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod (nostruct-align/1bbzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.104839 /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod(22): Reading nostruct-align/1b16A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32140/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod (nostruct-align/1b16A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.715837 /projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod(21): Reading nostruct-align/1plp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30051/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod (nostruct-align/1plp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.364878 /projects/compbio/experiments/models.97/pdb/1g/1gteD/nostruct-align/1gteD.t2k-w0.5.mod(22): Reading nostruct-align/1gteD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-3852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gteD/nostruct-align/1gteD.t2k-w0.5.mod (nostruct-align/1gteD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gteD/nostruct-align/1gteD.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.237843 /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod(22): Reading nostruct-align/1plq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod (nostruct-align/1plq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.472837 /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod(22): Reading nostruct-align/1dqaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod (nostruct-align/1dqaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.632862 /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod(21): Reading nostruct-align/1plr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod (nostruct-align/1plr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.437834 /projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod(21): Reading nostruct-align/1dqaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11672/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod (nostruct-align/1dqaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.252886 /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod(21): Reading nostruct-align/1pls.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod (nostruct-align/1pls.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.982843 /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod(21): Reading nostruct-align/1louA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod (nostruct-align/1louA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.767843 /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod(21): Reading nostruct-align/1azh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod (nostruct-align/1azh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.806839 /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod(21): Reading nostruct-align/1ica.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-11808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod (nostruct-align/1ica.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.399866 /projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod(22): Reading nostruct-align/1kzyC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22472/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod (nostruct-align/1kzyC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.605850 /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod(21): Reading nostruct-align/3pcnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod (nostruct-align/3pcnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.159834 /projects/compbio/experiments/models.97/pdb/1h/1hy3A/nostruct-align/1hy3A.t2k-w0.5.mod(22): Reading nostruct-align/1hy3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy3A/nostruct-align/1hy3A.t2k-w0.5.mod (nostruct-align/1hy3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hy3A/nostruct-align/1hy3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.416861 /projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod(22): Reading nostruct-align/1gg1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod (nostruct-align/1gg1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.267847 /projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod(21): Reading nostruct-align/1gesA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod (nostruct-align/1gesA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.656847 /projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod(22): Reading nostruct-align/1c3gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod (nostruct-align/1c3gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.962833 /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod(21): Reading nostruct-align/1augA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod (nostruct-align/1augA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.115868 /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod(22): Reading nostruct-align/1g2qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod (nostruct-align/1g2qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.599833 /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod(22): Reading nostruct-align/1azo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod (nostruct-align/1azo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.704855 /projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod(21): Reading nostruct-align/1dboA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod (nostruct-align/1dboA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.400858 /projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod(21): Reading nostruct-align/1hc7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27251/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod (nostruct-align/1hc7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.739872 /projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod(21): Reading nostruct-align/5hvpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-9821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod (nostruct-align/5hvpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.069862 /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod(21): Reading nostruct-align/1pmc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-24903/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod (nostruct-align/1pmc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.784883 /projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod(21): Reading nostruct-align/1azu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod (nostruct-align/1azu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.375862 /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod(21): Reading nostruct-align/1pmd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-2291/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod (nostruct-align/1pmd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.644861 /projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod(22): Reading nostruct-align/1pme.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15859/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod (nostruct-align/1pme.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.259882 /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod(21): Reading nostruct-align/1ilr1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8490/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod (nostruct-align/1ilr1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.331873 /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod(22): Reading nostruct-align/1pmi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod (nostruct-align/1pmi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.863867 /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod(21): Reading nostruct-align/1bxwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod (nostruct-align/1bxwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.861868 /projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod(21): Reading nostruct-align/1wjcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-29936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod (nostruct-align/1wjcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.757862 /projects/compbio/experiments/models.97/pdb/1l/1l5jA/nostruct-align/1l5jA.t2k-w0.5.mod(22): Reading nostruct-align/1l5jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-19651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l5jA/nostruct-align/1l5jA.t2k-w0.5.mod (nostruct-align/1l5jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l5jA/nostruct-align/1l5jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.676836 /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod(21): Reading nostruct-align/1dqbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod (nostruct-align/1dqbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.295828 /projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod(22): Reading nostruct-align/1pmt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod (nostruct-align/1pmt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.001865 /projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod(21): Reading nostruct-align/1xo1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12558/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod (nostruct-align/1xo1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.284883 /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod(21): Reading nostruct-align/1b7bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20364/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod (nostruct-align/1b7bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.310865 /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod(21): Reading nostruct-align/1pmy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod (nostruct-align/1pmy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.273834 /projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod(21): Reading nostruct-align/1g40A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-29413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod (nostruct-align/1g40A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.239841 /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod(22): Reading nostruct-align/1g2rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod (nostruct-align/1g2rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.168856 /projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod(21): Reading nostruct-align/1ev0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod (nostruct-align/1ev0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.139832 /projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod(22): Reading nostruct-align/1fpxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod (nostruct-align/1fpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.044834 /projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod(22): Reading nostruct-align/1jpaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod (nostruct-align/1jpaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.535851 /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod(21): Reading nostruct-align/1idk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-19808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod (nostruct-align/1idk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.064852 /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod(21): Reading nostruct-align/1idm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-6979/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod (nostruct-align/1idm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.355843 /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod(22): Reading nostruct-align/1pne.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11144/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod (nostruct-align/1pne.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.283875 /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod(22): Reading nostruct-align/1ido.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod (nostruct-align/1ido.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.774857 /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod(22): Reading nostruct-align/1dk8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod (nostruct-align/1dk8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.589870 /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod(21): Reading nostruct-align/1pnh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod (nostruct-align/1pnh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.740870 /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod(21): Reading nostruct-align/1bxxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7207/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod (nostruct-align/1bxxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.229864 /projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod(21): Reading nostruct-align/1dqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod (nostruct-align/1dqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.245861 /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod(21): Reading nostruct-align/6mhtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod (nostruct-align/6mhtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.275837 /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod(21): Reading nostruct-align/1qkfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod (nostruct-align/1qkfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.369852 /projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod(21): Reading nostruct-align/1fioA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-22099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod (nostruct-align/1fioA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.948868 /projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod(21): Reading nostruct-align/1jj7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod (nostruct-align/1jj7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.506861 /projects/compbio/experiments/models.97/pdb/1h/1hwwA/nostruct-align/1hwwA.t2k-w0.5.mod(22): Reading nostruct-align/1hwwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-19431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwwA/nostruct-align/1hwwA.t2k-w0.5.mod (nostruct-align/1hwwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hwwA/nostruct-align/1hwwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.264885 /projects/compbio/experiments/models.97/pdb/1h/1hy5A/nostruct-align/1hy5A.t2k-w0.5.mod(22): Reading nostruct-align/1hy5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28065/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy5A/nostruct-align/1hy5A.t2k-w0.5.mod (nostruct-align/1hy5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hy5A/nostruct-align/1hy5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.794884 /projects/compbio/experiments/models.97/pdb/1j/1j5wA/nostruct-align/1j5wA.t2k-w0.5.mod(22): Reading nostruct-align/1j5wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j5wA/nostruct-align/1j5wA.t2k-w0.5.mod (nostruct-align/1j5wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j5wA/nostruct-align/1j5wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.205854 /projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod(22): Reading nostruct-align/1j75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12309/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod (nostruct-align/1j75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.712852 /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod(21): Reading nostruct-align/1auiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod (nostruct-align/1auiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.487837 /projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod(22): Reading nostruct-align/1g41A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod (nostruct-align/1g41A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.488840 /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod(21): Reading nostruct-align/1auiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod (nostruct-align/1auiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.076836 /projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod(21): Reading nostruct-align/1dbqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31096/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod (nostruct-align/1dbqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.938864 /projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod(22): Reading nostruct-align/1hc9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30045/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod (nostruct-align/1hc9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.635857 /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod(21): Reading nostruct-align/1poa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod (nostruct-align/1poa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.420843 /projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod(21): Reading nostruct-align/1fr7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod (nostruct-align/1fr7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.539875 /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod(21): Reading nostruct-align/1poc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod (nostruct-align/1poc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.811852 /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod(21): Reading nostruct-align/1poh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod (nostruct-align/1poh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.773842 /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod(22): Reading nostruct-align/1bxyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod (nostruct-align/1bxyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.806868 /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod(22): Reading nostruct-align/1afwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod (nostruct-align/1afwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.098869 /projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod(21): Reading nostruct-align/1iejA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod (nostruct-align/1iejA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.609837 /projects/compbio/experiments/models.97/pdb/1g/1gthA/nostruct-align/1gthA.t2k-w0.5.mod(22): Reading nostruct-align/1gthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gthA/nostruct-align/1gthA.t2k-w0.5.mod (nostruct-align/1gthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gthA/nostruct-align/1gthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.911886 /projects/compbio/experiments/models.97/pdb/1i/1i2hA/nostruct-align/1i2hA.t2k-w0.5.mod(22): Reading nostruct-align/1i2hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2hA/nostruct-align/1i2hA.t2k-w0.5.mod (nostruct-align/1i2hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i2hA/nostruct-align/1i2hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.723831 /projects/compbio/experiments/models.97/pdb/1g/1gthB/nostruct-align/1gthB.t2k-w0.5.mod(22): Reading nostruct-align/1gthB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-18669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gthB/nostruct-align/1gthB.t2k-w0.5.mod (nostruct-align/1gthB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gthB/nostruct-align/1gthB.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.158882 /projects/compbio/experiments/models.97/pdb/1g/1gthC/nostruct-align/1gthC.t2k-w0.5.mod(22): Reading nostruct-align/1gthC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gthC/nostruct-align/1gthC.t2k-w0.5.mod (nostruct-align/1gthC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gthC/nostruct-align/1gthC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.958830 /projects/compbio/experiments/models.97/pdb/1g/1gthD/nostruct-align/1gthD.t2k-w0.5.mod(22): Reading nostruct-align/1gthD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gthD/nostruct-align/1gthD.t2k-w0.5.mod (nostruct-align/1gthD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gthD/nostruct-align/1gthD.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.234865 /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod(22): Reading nostruct-align/1pot.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27790/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod (nostruct-align/1pot.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.564867 /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod(21): Reading nostruct-align/1pou.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-12886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod (nostruct-align/1pou.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.961834 /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod(21): Reading nostruct-align/1b7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-15089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod (nostruct-align/1b7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.551888 /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod(22): Reading nostruct-align/1fipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod (nostruct-align/1fipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.531862 /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod(22): Reading nostruct-align/1ifa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod (nostruct-align/1ifa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.008833 /projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod(21): Reading nostruct-align/1hwxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-5519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod (nostruct-align/1hwxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.547873 /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod(22): Reading nostruct-align/1ifc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod (nostruct-align/1ifc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.529877 /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod(21): Reading nostruct-align/1c3jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-20530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod (nostruct-align/1c3jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.562866 /projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod(22): Reading nostruct-align/1gg4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27983/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod (nostruct-align/1gg4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.626888 /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod(21): Reading nostruct-align/1ifi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod (nostruct-align/1ifi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.769838 /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod(21): Reading nostruct-align/1qrqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod (nostruct-align/1qrqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.159832 /projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod(21): Reading nostruct-align/1ev2E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod (nostruct-align/1ev2E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.116859 /projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod(22): Reading nostruct-align/1fpzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod (nostruct-align/1fpzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.800869 /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod(21): Reading nostruct-align/1ifj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod (nostruct-align/1ifj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.769838 /projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod(21): Reading nostruct-align/1ppa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17440/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod (nostruct-align/1ppa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.424881 /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod(21): Reading nostruct-align/1co4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod (nostruct-align/1co4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.160879 /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod(21): Reading nostruct-align/1ifl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod (nostruct-align/1ifl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.192852 /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod(21): Reading nostruct-align/1ifm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod (nostruct-align/1ifm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.150883 /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod(21): Reading nostruct-align/1ifp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod (nostruct-align/1ifp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.430864 /projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod(22): Reading nostruct-align/1d6zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2771/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod (nostruct-align/1d6zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.644886 /projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod(21): Reading nostruct-align/1ift.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod (nostruct-align/1ift.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.705854 /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod(22): Reading nostruct-align/1ppn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod (nostruct-align/1ppn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.448868 /projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod(21): Reading nostruct-align/1ppo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod (nostruct-align/1ppo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.152864 /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod(22): Reading nostruct-align/1dqeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13005/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod (nostruct-align/1dqeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.919886 /projects/compbio/experiments/models.97/pdb/1l/1lq7A/nostruct-align/1lq7A.t2k-w0.5.mod(22): Reading nostruct-align/1lq7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lq7A/nostruct-align/1lq7A.t2k-w0.5.mod (nostruct-align/1lq7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lq7A/nostruct-align/1lq7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.129860 /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod(22): Reading nostruct-align/1ppt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14845/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod (nostruct-align/1ppt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.593878 /projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod(22): Reading nostruct-align/1i9sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod (nostruct-align/1i9sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.951857 /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod(21): Reading nostruct-align/1b7eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14471/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod (nostruct-align/1b7eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.374836 /projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod(21): Reading nostruct-align/1fiqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod (nostruct-align/1fiqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.690882 /projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod(21): Reading nostruct-align/1fiqC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod (nostruct-align/1fiqC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.608864 /projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod(22): Reading nostruct-align/1hy7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26501/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod (nostruct-align/1hy7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.208834 /projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod(21): Reading nostruct-align/1hwyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-8893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod (nostruct-align/1hwyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.429888 /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod(22): Reading nostruct-align/1j77A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod (nostruct-align/1j77A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.560875 /projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod(21): Reading nostruct-align/1gewA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-7954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod (nostruct-align/1gewA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.524860 /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod(21): Reading nostruct-align/1igd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-29555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod (nostruct-align/1igd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.525837 /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod(21): Reading nostruct-align/2bvwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-15764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod (nostruct-align/2bvwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.635860 /projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod(21): Reading nostruct-align/1sctB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29843/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod (nostruct-align/1sctB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.327871 /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod(22): Reading nostruct-align/1qrrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod (nostruct-align/1qrrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.486870 /projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod(21): Reading nostruct-align/1fr9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1533/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod (nostruct-align/1fr9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.772860 /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod(21): Reading nostruct-align/1igl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod (nostruct-align/1igl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.461874 /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod(22): Reading nostruct-align/2vsgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod (nostruct-align/2vsgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.754835 /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod(21): Reading nostruct-align/1om2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod (nostruct-align/1om2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.620867 /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod(22): Reading nostruct-align/2spcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod (nostruct-align/2spcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.505877 /projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod(22): Reading nostruct-align/1h6dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod (nostruct-align/1h6dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.907831 /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod(21): Reading nostruct-align/2emo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-11980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod (nostruct-align/2emo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.923874 /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod(21): Reading nostruct-align/1igs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod (nostruct-align/1igs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.230841 /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod(21): Reading nostruct-align/1rvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod (nostruct-align/1rvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.353861 /projects/compbio/experiments/models.97/pdb/1k/1ku2A/nostruct-align/1ku2A.t2k-w0.5.mod(22): Reading nostruct-align/1ku2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9988/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ku2A/nostruct-align/1ku2A.t2k-w0.5.mod (nostruct-align/1ku2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ku2A/nostruct-align/1ku2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.611887 /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod(22): Reading nostruct-align/1in4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod (nostruct-align/1in4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.387873 /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod(21): Reading nostruct-align/1b7fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod (nostruct-align/1b7fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.077839 /projects/compbio/experiments/models.97/pdb/1j/1jpdX/nostruct-align/1jpdX.t2k-w0.5.mod(22): Reading nostruct-align/1jpdX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpdX/nostruct-align/1jpdX.t2k-w0.5.mod (nostruct-align/1jpdX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpdX/nostruct-align/1jpdX.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.859875 /projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod(22): Reading nostruct-align/1j78A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod (nostruct-align/1j78A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.724865 /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod(21): Reading nostruct-align/3pfk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-2548/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod (nostruct-align/3pfk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.134850 /projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod(21): Reading nostruct-align/1gg6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod (nostruct-align/1gg6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.653854 /projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod(22): Reading nostruct-align/1keaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-29012/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod (nostruct-align/1keaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.056856 /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod(22): Reading nostruct-align/1vfyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod (nostruct-align/1vfyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.425886 /projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod(21): Reading nostruct-align/1gg6C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-13538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod (nostruct-align/1gg6C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.759876 /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod(21): Reading nostruct-align/1dbtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod (nostruct-align/1dbtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.588877 /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod(22): Reading nostruct-align/2end.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod (nostruct-align/2end.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.533880 /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod(21): Reading nostruct-align/1scuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod (nostruct-align/1scuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.413872 /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod(22): Reading nostruct-align/1bs0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod (nostruct-align/1bs0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.809839 /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod(21): Reading nostruct-align/3c2c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod (nostruct-align/3c2c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.788843 /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod(22): Reading nostruct-align/2eng.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod (nostruct-align/2eng.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.605856 /projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod(21): Reading nostruct-align/1cmxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod (nostruct-align/1cmxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.387827 /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod(21): Reading nostruct-align/1co6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod (nostruct-align/1co6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.467863 /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod(22): Reading nostruct-align/1ihp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod (nostruct-align/1ihp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.551863 /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod(21): Reading nostruct-align/1efcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod (nostruct-align/1efcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.767836 /projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod(21): Reading nostruct-align/1e3aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod (nostruct-align/1e3aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.605850 /projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod(21): Reading nostruct-align/1e3aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod (nostruct-align/1e3aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.016876 /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod(21): Reading nostruct-align/1prn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod (nostruct-align/1prn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.214842 /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod(22): Reading nostruct-align/1ku3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod (nostruct-align/1ku3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.482887 /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod(22): Reading nostruct-align/1dqgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod (nostruct-align/1dqgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.943872 /projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod(21): Reading nostruct-align/1prr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2773/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod (nostruct-align/1prr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.462885 /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod(21): Reading nostruct-align/1prs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod (nostruct-align/1prs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.462885 /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod(21): Reading nostruct-align/1pru.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-18225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod (nostruct-align/1pru.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.609837 /projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod(21): Reading nostruct-align/1hy9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-22543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod (nostruct-align/1hy9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.387833 /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod(22): Reading nostruct-align/1j79A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod (nostruct-align/1j79A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.055887 /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod(21): Reading nostruct-align/3pgk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29708/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod (nostruct-align/3pgk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.321859 /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod(22): Reading nostruct-align/1c3mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod (nostruct-align/1c3mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.737865 /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod(21): Reading nostruct-align/3pgm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-17764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod (nostruct-align/3pgm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.058887 /projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod(22): Reading nostruct-align/1dd3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16966/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod (nostruct-align/1dd3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.584852 /projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod(22): Reading nostruct-align/1dbuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod (nostruct-align/1dbuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.778887 /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod(21): Reading nostruct-align/1bqsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod (nostruct-align/1bqsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.534851 /projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod(22): Reading nostruct-align/1dd3C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod (nostruct-align/1dd3C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.128834 /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod(21): Reading nostruct-align/1ba1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod (nostruct-align/1ba1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.714832 /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod(21): Reading nostruct-align/1ba4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod (nostruct-align/1ba4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.225866 /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod(21): Reading nostruct-align/1ba5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod (nostruct-align/1ba5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.596840 /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod(21): Reading nostruct-align/1pse.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-635/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod (nostruct-align/1pse.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.071882 /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod(21): Reading nostruct-align/1b7gO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-9180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod (nostruct-align/1b7gO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.181854 /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod(22): Reading nostruct-align/1ba6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod (nostruct-align/1ba6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.225866 /projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod(22): Reading nostruct-align/1k9jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16562/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod (nostruct-align/1k9jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.563856 /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod(22): Reading nostruct-align/1h6fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-7166/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod (nostruct-align/1h6fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.817852 /projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod(21): Reading nostruct-align/1a3yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-11151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod (nostruct-align/1a3yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.811831 /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod(21): Reading nostruct-align/1psm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod (nostruct-align/1psm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.284840 /projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod(22): Reading nostruct-align/1jatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod (nostruct-align/1jatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.719851 /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod(21): Reading nostruct-align/2tbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-18865/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod (nostruct-align/2tbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.071878 /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod(21): Reading nostruct-align/1jatB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-26365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod (nostruct-align/1jatB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.782845 /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod(21): Reading nostruct-align/1sriA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-20605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod (nostruct-align/1sriA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.799852 /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod(22): Reading nostruct-align/2bopA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod (nostruct-align/2bopA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.602873 /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod(21): Reading nostruct-align/1qkkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod (nostruct-align/1qkkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.145870 /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod(22): Reading nostruct-align/1efdN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8348/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod (nostruct-align/1efdN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.735888 /projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod(22): Reading nostruct-align/1dxrC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod (nostruct-align/1dxrC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.489832 /projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod(22): Reading nostruct-align/1f80D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31458/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod (nostruct-align/1f80D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.165863 /projects/compbio/experiments/models.97/pdb/1e/1etxA/nostruct-align/1etxA.t2k-w0.5.mod(22): Reading nostruct-align/1etxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-28375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etxA/nostruct-align/1etxA.t2k-w0.5.mod (nostruct-align/1etxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1etxA/nostruct-align/1etxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.378864 /projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod(21): Reading nostruct-align/2tbs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod (nostruct-align/2tbs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.957840 /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod(21): Reading nostruct-align/1bs2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-22365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod (nostruct-align/1bs2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.280882 /projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod(22): Reading nostruct-align/1dxrH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1687/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod (nostruct-align/1dxrH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.533888 /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod(21): Reading nostruct-align/1pta.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod (nostruct-align/1pta.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.492842 /projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod(21): Reading nostruct-align/1dxrL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod (nostruct-align/1dxrL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.018850 /projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod(22): Reading nostruct-align/1dxrM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24674/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod (nostruct-align/1dxrM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.899828 /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod(21): Reading nostruct-align/1ptf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod (nostruct-align/1ptf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.861866 /projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod(21): Reading nostruct-align/1bb8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-5745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod (nostruct-align/1bb8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.318829 /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod(22): Reading nostruct-align/1bb9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-32720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod (nostruct-align/1bb9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.883829 /projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod(22): Reading nostruct-align/1h6gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod (nostruct-align/1h6gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.485867 /projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod(21): Reading nostruct-align/1gtmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-32469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod (nostruct-align/1gtmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.760839 /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod(21): Reading nostruct-align/1i2mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod (nostruct-align/1i2mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.575836 /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod(22): Reading nostruct-align/1mdyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod (nostruct-align/1mdyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.647842 /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod(21): Reading nostruct-align/1qdbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-8605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod (nostruct-align/1qdbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.211887 /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod(22): Reading nostruct-align/1dqiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod (nostruct-align/1dqiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.003834 /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod(22): Reading nostruct-align/1ptq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod (nostruct-align/1ptq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.787880 /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod(21): Reading nostruct-align/1ybvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod (nostruct-align/1ybvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.700867 /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod(21): Reading nostruct-align/1bag.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod (nostruct-align/1bag.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.940863 /projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod(22): Reading nostruct-align/1bah.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12258/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod (nostruct-align/1bah.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.675867 /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod(21): Reading nostruct-align/1mlbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod (nostruct-align/1mlbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.039831 /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod(21): Reading nostruct-align/1qklA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod (nostruct-align/1qklA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.445868 /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod(22): Reading nostruct-align/1fiuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30990/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod (nostruct-align/1fiuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.134840 /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod(21): Reading nostruct-align/1bak.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod (nostruct-align/1bak.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.102873 /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod(22): Reading nostruct-align/1pty.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12220/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod (nostruct-align/1pty.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.851841 /projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod(22): Reading nostruct-align/1dxsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod (nostruct-align/1dxsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.643866 /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod(21): Reading nostruct-align/1dz1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod (nostruct-align/1dz1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.130886 /projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod(21): Reading nostruct-align/1f81A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod (nostruct-align/1f81A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.910856 /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod(21): Reading nostruct-align/1bal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod (nostruct-align/1bal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.662857 /projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod(21): Reading nostruct-align/1dz1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-22480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod (nostruct-align/1dz1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.130886 /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod(21): Reading nostruct-align/1auoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod (nostruct-align/1auoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.668867 /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod(21): Reading nostruct-align/1bam.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod (nostruct-align/1bam.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.494864 /projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod(21): Reading nostruct-align/1c3oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-21022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod (nostruct-align/1c3oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.635839 /projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod(21): Reading nostruct-align/1c3oB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod (nostruct-align/1c3oB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.424841 /projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod(21): Reading nostruct-align/1c3oC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod (nostruct-align/1c3oC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.549856 /projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod(22): Reading nostruct-align/1ev7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod (nostruct-align/1ev7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.517879 /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod(22): Reading nostruct-align/1g2yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod (nostruct-align/1g2yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.108849 /projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod(21): Reading nostruct-align/1g47A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-16341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod (nostruct-align/1g47A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.635872 /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod(21): Reading nostruct-align/1dbwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod (nostruct-align/1dbwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.272884 /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod(21): Reading nostruct-align/1dd5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod (nostruct-align/1dd5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479879 /projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod(21): Reading nostruct-align/1ev7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod (nostruct-align/1ev7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.342846 /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod(21): Reading nostruct-align/1baq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod (nostruct-align/1baq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.575876 /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod(21): Reading nostruct-align/1bquA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod (nostruct-align/1bquA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.085861 /projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod(21): Reading nostruct-align/1c3oE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-25922/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod (nostruct-align/1c3oE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.245888 /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod(21): Reading nostruct-align/1itbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-5737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod (nostruct-align/1itbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.871874 /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod(21): Reading nostruct-align/1mslA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod (nostruct-align/1mslA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.591866 /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod(22): Reading nostruct-align/2tct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-18812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod (nostruct-align/2tct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.305882 /projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod(22): Reading nostruct-align/1qrvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod (nostruct-align/1qrvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.040829 /projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod(21): Reading nostruct-align/1c3oG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18453/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod (nostruct-align/1c3oG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.982870 /projects/compbio/experiments/models.97/pdb/1q/1qrvB/nostruct-align/1qrvB.t2k-w0.5.mod(22): Reading nostruct-align/1qrvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrvB/nostruct-align/1qrvB.t2k-w0.5.mod (nostruct-align/1qrvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qrvB/nostruct-align/1qrvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.668829 /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod(22): Reading nostruct-align/1puc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod (nostruct-align/1puc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.982834 /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod(21): Reading nostruct-align/1bc4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26117/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod (nostruct-align/1bc4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.494835 /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod(22): Reading nostruct-align/1pud.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod (nostruct-align/1pud.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.676849 /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod(21): Reading nostruct-align/1bax.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod (nostruct-align/1bax.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.606846 /projects/compbio/experiments/models.97/pdb/1l/1lj2A/nostruct-align/1lj2A.t2k-w0.5.mod(22): Reading nostruct-align/1lj2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lj2A/nostruct-align/1lj2A.t2k-w0.5.mod (nostruct-align/1lj2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lj2A/nostruct-align/1lj2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.672836 /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod(22): Reading nostruct-align/1h6hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod (nostruct-align/1h6hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.499830 /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod(21): Reading nostruct-align/3gatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod (nostruct-align/3gatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.530832 /projects/compbio/experiments/models.97/pdb/1l/1lj2C/nostruct-align/1lj2C.t2k-w0.5.mod(22): Reading nostruct-align/1lj2C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20501/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lj2C/nostruct-align/1lj2C.t2k-w0.5.mod (nostruct-align/1lj2C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lj2C/nostruct-align/1lj2C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.358879 /projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod(21): Reading nostruct-align/1e3dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14003/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod (nostruct-align/1e3dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.684862 /projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod(21): Reading nostruct-align/6ldh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-19740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod (nostruct-align/6ldh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.213873 /projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod(21): Reading nostruct-align/1e3dB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8012/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod (nostruct-align/1e3dB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.737885 /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod(21): Reading nostruct-align/1bba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod (nostruct-align/1bba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.597862 /projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod(22): Reading nostruct-align/1jc4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod (nostruct-align/1jc4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.032837 /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod(21): Reading nostruct-align/1put.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod (nostruct-align/1put.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.004866 /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod(21): Reading nostruct-align/1bbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30952/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod (nostruct-align/1bbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.831829 /projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod(21): Reading nostruct-align/1qkmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod (nostruct-align/1qkmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.068863 /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod(21): Reading nostruct-align/1fivA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod (nostruct-align/1fivA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.495836 /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod(21): Reading nostruct-align/1mlcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod (nostruct-align/1mlcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.078833 /projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod(21): Reading nostruct-align/1f82A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod (nostruct-align/1f82A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.183836 /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod(21): Reading nostruct-align/1bbl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod (nostruct-align/1bbl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.636873 /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod(21): Reading nostruct-align/1dxtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2452/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod (nostruct-align/1dxtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516869 /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod(22): Reading nostruct-align/1c3pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1385/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod (nostruct-align/1c3pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.731833 /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod(21): Reading nostruct-align/1ile.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-6704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod (nostruct-align/1ile.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.710873 /projects/compbio/experiments/models.97/pdb/1k/1keeA/nostruct-align/1keeA.t2k-w0.5.mod(22): Reading nostruct-align/1keeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-19941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keeA/nostruct-align/1keeA.t2k-w0.5.mod (nostruct-align/1keeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1keeA/nostruct-align/1keeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.839830 /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod(21): Reading nostruct-align/1bbo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod (nostruct-align/1bbo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.021837 /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod(22): Reading nostruct-align/1dbxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod (nostruct-align/1dbxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.769861 /projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod(21): Reading nostruct-align/1dd6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod (nostruct-align/1dd6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.961849 /projects/compbio/experiments/models.97/pdb/1k/1keeC/nostruct-align/1keeC.t2k-w0.5.mod(22): Reading nostruct-align/1keeC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29610/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keeC/nostruct-align/1keeC.t2k-w0.5.mod (nostruct-align/1keeC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1keeC/nostruct-align/1keeC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.366871 /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod(21): Reading nostruct-align/1bs4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-27152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod (nostruct-align/1bs4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.853838 /projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod(21): Reading nostruct-align/2tdt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod (nostruct-align/2tdt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.955837 /projects/compbio/experiments/models.97/pdb/1k/1keeE/nostruct-align/1keeE.t2k-w0.5.mod(22): Reading nostruct-align/1keeE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keeE/nostruct-align/1keeE.t2k-w0.5.mod (nostruct-align/1keeE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1keeE/nostruct-align/1keeE.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.227856 /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod(21): Reading nostruct-align/1ilk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod (nostruct-align/1ilk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.667841 /projects/compbio/experiments/models.97/pdb/1k/1keeG/nostruct-align/1keeG.t2k-w0.5.mod(22): Reading nostruct-align/1keeG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keeG/nostruct-align/1keeG.t2k-w0.5.mod (nostruct-align/1keeG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1keeG/nostruct-align/1keeG.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.768845 /projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod(22): Reading nostruct-align/1gmeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6132/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod (nostruct-align/1gmeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.587835 /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod(22): Reading nostruct-align/2erl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13575/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod (nostruct-align/2erl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.159855 /projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod(21): Reading nostruct-align/1bby.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-12744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod (nostruct-align/1bby.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.999882 /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod(22): Reading nostruct-align/1bd8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8178/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod (nostruct-align/1bd8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.326876 /projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod(21): Reading nostruct-align/1fxiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3098/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod (nostruct-align/1fxiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.455877 /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod(21): Reading nostruct-align/2alcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod (nostruct-align/2alcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.450876 /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod(22): Reading nostruct-align/1jy1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod (nostruct-align/1jy1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.932871 /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod(21): Reading nostruct-align/1pvl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-18401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod (nostruct-align/1pvl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.604883 /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod(22): Reading nostruct-align/1qddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15198/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod (nostruct-align/1qddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.570860 /projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod(21): Reading nostruct-align/1fbmC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-14477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod (nostruct-align/1fbmC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.474844 /projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod(21): Reading nostruct-align/1bcg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28293/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod (nostruct-align/1bcg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.817848 /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod(21): Reading nostruct-align/1tnrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod (nostruct-align/1tnrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.473852 /projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod(22): Reading nostruct-align/1mldA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-24014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod (nostruct-align/1mldA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.114876 /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod(21): Reading nostruct-align/2bosA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12384/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod (nostruct-align/2bosA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.595837 /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod(21): Reading nostruct-align/1bjmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod (nostruct-align/1bjmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.345879 /projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod(21): Reading nostruct-align/1i9yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-2143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod (nostruct-align/1i9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.886829 /projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod(21): Reading nostruct-align/1fiwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25417/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod (nostruct-align/1fiwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.132853 /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod(22): Reading nostruct-align/1fk5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod (nostruct-align/1fk5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.110876 /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod(21): Reading nostruct-align/1dz3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod (nostruct-align/1dz3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.905851 /projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod(21): Reading nostruct-align/1f6uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-28190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod (nostruct-align/1f6uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.039885 /projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod(22): Reading nostruct-align/1f83A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod (nostruct-align/1f83A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.170870 /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod(21): Reading nostruct-align/1r69.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod (nostruct-align/1r69.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.539848 /projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod(22): Reading nostruct-align/1f83B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10069/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod (nostruct-align/1f83B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.593859 /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod(21): Reading nostruct-align/1c3qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod (nostruct-align/1c3qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.382833 /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod(21): Reading nostruct-align/1bco.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-20876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod (nostruct-align/1bco.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.411877 /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod(21): Reading nostruct-align/1be1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod (nostruct-align/1be1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.527874 /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod(21): Reading nostruct-align/1bct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-29080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod (nostruct-align/1bct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.416887 /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod(21): Reading nostruct-align/1iml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod (nostruct-align/1iml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.024832 /projects/compbio/experiments/models.97/pdb/1k/1klpA/nostruct-align/1klpA.t2k-w0.5.mod(22): Reading nostruct-align/1klpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1klpA/nostruct-align/1klpA.t2k-w0.5.mod (nostruct-align/1klpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1klpA/nostruct-align/1klpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.679861 /projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod(22): Reading nostruct-align/1fxjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod (nostruct-align/1fxjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.798861 /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod(21): Reading nostruct-align/1hilB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-20643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod (nostruct-align/1hilB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.050875 /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod(21): Reading nostruct-align/1imt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14191/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod (nostruct-align/1imt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.857887 /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod(22): Reading nostruct-align/1ig0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod (nostruct-align/1ig0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.469833 /projects/compbio/experiments/models.97/pdb/1k/1ku8A/nostruct-align/1ku8A.t2k-w0.5.mod(22): Reading nostruct-align/1ku8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ku8A/nostruct-align/1ku8A.t2k-w0.5.mod (nostruct-align/1ku8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ku8A/nostruct-align/1ku8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.734888 /projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod(22): Reading nostruct-align/1qdeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11178/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod (nostruct-align/1qdeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.154879 /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod(22): Reading nostruct-align/1fbnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5091/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod (nostruct-align/1fbnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.304853 /projects/compbio/experiments/models.97/pdb/1j/1jaxA/nostruct-align/1jaxA.t2k-w0.5.mod(22): Reading nostruct-align/1jaxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jaxA/nostruct-align/1jaxA.t2k-w0.5.mod (nostruct-align/1jaxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jaxA/nostruct-align/1jaxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.441872 /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod(21): Reading nostruct-align/1bdb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod (nostruct-align/1bdb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.501860 /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod(21): Reading nostruct-align/1bde.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod (nostruct-align/1bde.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.357832 /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod(21): Reading nostruct-align/5rubA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-23224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod (nostruct-align/5rubA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.851873 /projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod(21): Reading nostruct-align/1eo0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6040/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod (nostruct-align/1eo0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.195841 /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod(22): Reading nostruct-align/1poiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod (nostruct-align/1poiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.883858 /projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod(21): Reading nostruct-align/1pwt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod (nostruct-align/1pwt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.016850 /projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod(21): Reading nostruct-align/1bdg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-25763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod (nostruct-align/1bdg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.079861 /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod(22): Reading nostruct-align/1poiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-31240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod (nostruct-align/1poiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.000830 /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod(22): Reading nostruct-align/1bjnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod (nostruct-align/1bjnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.660835 /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod(22): Reading nostruct-align/1i9zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod (nostruct-align/1i9zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.219856 /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod(22): Reading nostruct-align/1jy2N.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod (nostruct-align/1jy2N.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.280848 /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod(22): Reading nostruct-align/1jy2O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod (nostruct-align/1jy2O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.646839 /projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod(21): Reading nostruct-align/1dz4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod (nostruct-align/1dz4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.177866 /projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod(21): Reading nostruct-align/1f6vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-27000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod (nostruct-align/1f6vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.695860 /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod(22): Reading nostruct-align/1jy2P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod (nostruct-align/1jy2P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.126852 /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod(21): Reading nostruct-align/1aurA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-611/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod (nostruct-align/1aurA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.219875 /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod(22): Reading nostruct-align/1bdo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1183/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod (nostruct-align/1bdo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.290854 /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod(21): Reading nostruct-align/1dd8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-5522/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod (nostruct-align/1dd8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.569872 /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod(21): Reading nostruct-align/1bds.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod (nostruct-align/1bds.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.828852 /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod(21): Reading nostruct-align/1bf2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod (nostruct-align/1bf2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.238838 /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod(21): Reading nostruct-align/1nhkL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-1820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod (nostruct-align/1nhkL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.724876 /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod(21): Reading nostruct-align/1inp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod (nostruct-align/1inp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.823839 /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod(21): Reading nostruct-align/1bf8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod (nostruct-align/1bf8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.999884 /projects/compbio/experiments/models.97/pdb/1l/1lj5A/nostruct-align/1lj5A.t2k-w0.5.mod(22): Reading nostruct-align/1lj5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-4499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lj5A/nostruct-align/1lj5A.t2k-w0.5.mod (nostruct-align/1lj5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lj5A/nostruct-align/1lj5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.777884 /projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod(22): Reading nostruct-align/1fxkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod (nostruct-align/1fxkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.814852 /projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod(22): Reading nostruct-align/1h6kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod (nostruct-align/1h6kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.955866 /projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod(21): Reading nostruct-align/3icb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3446/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod (nostruct-align/3icb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.850853 /projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod(22): Reading nostruct-align/1fxkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod (nostruct-align/1fxkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.123867 /projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod(22): Reading nostruct-align/1fxkC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2313/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod (nostruct-align/1fxkC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.300880 /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod(21): Reading nostruct-align/5pal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod (nostruct-align/5pal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.038853 /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod(21): Reading nostruct-align/1gtqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod (nostruct-align/1gtqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.733854 /projects/compbio/experiments/models.97/pdb/7a/7acn/nostruct-align/7acn.t2k-w0.5.mod(22): Reading nostruct-align/7acn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3838/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7acn/nostruct-align/7acn.t2k-w0.5.mod (nostruct-align/7acn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7acn/nostruct-align/7acn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.757828 /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod(21): Reading nostruct-align/1efiD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod (nostruct-align/1efiD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.074835 /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod(22): Reading nostruct-align/1bea.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod (nostruct-align/1bea.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.173861 /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod(22): Reading nostruct-align/1jayA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod (nostruct-align/1jayA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.238876 /projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod(21): Reading nostruct-align/1jc7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-9711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod (nostruct-align/1jc7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.059839 /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod(21): Reading nostruct-align/1bec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-29871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod (nostruct-align/1bec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.129881 /projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod(21): Reading nostruct-align/1bed.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25887/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod (nostruct-align/1bed.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.759884 /projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod(21): Reading nostruct-align/1hpwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21625/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod (nostruct-align/1hpwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.439861 /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod(21): Reading nostruct-align/2tgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod (nostruct-align/2tgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.148888 /projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod(21): Reading nostruct-align/1emsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod (nostruct-align/1emsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.923874 /projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod(21): Reading nostruct-align/1eo1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod (nostruct-align/1eo1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.193872 /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod(22): Reading nostruct-align/2tgi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12899/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod (nostruct-align/2tgi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.389843 /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod(22): Reading nostruct-align/1bjoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod (nostruct-align/1bjoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.778860 /projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod(22): Reading nostruct-align/1jy3N.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod (nostruct-align/1jy3N.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.451880 /projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod(21): Reading nostruct-align/1bei.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod (nostruct-align/1bei.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.797855 /projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod(22): Reading nostruct-align/1jy3O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2773/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod (nostruct-align/1jy3O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.646839 /projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod(22): Reading nostruct-align/1jy3P.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod (nostruct-align/1jy3P.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.125887 /projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod(21): Reading nostruct-align/1xat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod (nostruct-align/1xat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.639860 /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod(21): Reading nostruct-align/1beo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod (nostruct-align/1beo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.753883 /projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod(22): Reading nostruct-align/1k2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod (nostruct-align/1k2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.607845 /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod(22): Reading nostruct-align/1dd9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod (nostruct-align/1dd9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.337866 /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod(21): Reading nostruct-align/7aatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7021/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod (nostruct-align/7aatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.003878 /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod(22): Reading nostruct-align/1bg0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod (nostruct-align/1bg0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.399845 /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod(22): Reading nostruct-align/1mspA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod (nostruct-align/1mspA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.093847 /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod(21): Reading nostruct-align/1ioj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9284/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod (nostruct-align/1ioj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.999872 /projects/compbio/experiments/models.97/pdb/1j/1jplA/nostruct-align/1jplA.t2k-w0.5.mod(22): Reading nostruct-align/1jplA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jplA/nostruct-align/1jplA.t2k-w0.5.mod (nostruct-align/1jplA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jplA/nostruct-align/1jplA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.160852 /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod(21): Reading nostruct-align/1bet.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod (nostruct-align/1bet.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.889833 /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod(21): Reading nostruct-align/1bg2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-25378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod (nostruct-align/1bg2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.579849 /projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod(21): Reading nostruct-align/1h6kZ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-3067/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod (nostruct-align/1h6kZ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.683872 /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod(21): Reading nostruct-align/1pyc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod (nostruct-align/1pyc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.378870 /projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod(22): Reading nostruct-align/1bg4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-30846/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod (nostruct-align/1bg4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.547878 /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod(21): Reading nostruct-align/1bg6.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod (nostruct-align/1bg6.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.700869 /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod(21): Reading nostruct-align/1bg7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-12354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod (nostruct-align/1bg7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.170883 /projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod(22): Reading nostruct-align/1d7bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-3561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod (nostruct-align/1d7bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.107840 /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod(21): Reading nostruct-align/1fxlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-30768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod (nostruct-align/1fxlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.890888 /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod(22): Reading nostruct-align/1h6lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23680/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod (nostruct-align/1h6lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.205879 /projects/compbio/experiments/models.97/pdb/1j/1jy4A/nostruct-align/1jy4A.t2k-w0.5.mod(22): Reading nostruct-align/1jy4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy4A/nostruct-align/1jy4A.t2k-w0.5.mod (nostruct-align/1jy4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy4A/nostruct-align/1jy4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.567886 /projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod(22): Reading nostruct-align/1e3hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-29369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod (nostruct-align/1e3hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.072859 /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod(22): Reading nostruct-align/2hntE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod (nostruct-align/2hntE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.423874 /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod(21): Reading nostruct-align/1xbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod (nostruct-align/1xbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.815859 /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod(21): Reading nostruct-align/1bcfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod (nostruct-align/1bcfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.424887 /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod(21): Reading nostruct-align/1gtrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod (nostruct-align/1gtrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.524847 /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod(22): Reading nostruct-align/1i40A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod (nostruct-align/1i40A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.567858 /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod(21): Reading nostruct-align/1iow.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15122/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod (nostruct-align/1iow.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.852865 /projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod(21): Reading nostruct-align/1dqnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6494/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod (nostruct-align/1dqnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.878887 /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod(21): Reading nostruct-align/1pyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod (nostruct-align/1pyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.200871 /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod(22): Reading nostruct-align/1bfd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3533/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod (nostruct-align/1bfd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.100851 /projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod(21): Reading nostruct-align/1hr6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod (nostruct-align/1hr6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.798851 /projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod(21): Reading nostruct-align/1hr6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22343/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod (nostruct-align/1hr6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.937853 /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod(21): Reading nostruct-align/1bfg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-18688/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod (nostruct-align/1bfg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.460844 /projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod(21): Reading nostruct-align/1bfi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod (nostruct-align/1bfi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.679855 /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod(22): Reading nostruct-align/1f86A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10259/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod (nostruct-align/1f86A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.520855 /projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod(21): Reading nostruct-align/4rhv1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28710/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod (nostruct-align/4rhv1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.107834 /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod(21): Reading nostruct-align/1ipd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-28918/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod (nostruct-align/1ipd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.437868 /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod(21): Reading nostruct-align/5tmpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31838/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod (nostruct-align/5tmpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.531885 /projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod(21): Reading nostruct-align/4rhv3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-3780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod (nostruct-align/4rhv3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.088875 /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod(21): Reading nostruct-align/1pvuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-21673/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod (nostruct-align/1pvuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.565828 /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod(21): Reading nostruct-align/4rhv4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-2705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod (nostruct-align/4rhv4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.511847 /projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod(22): Reading nostruct-align/1zfjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31273/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod (nostruct-align/1zfjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.025875 /projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod(22): Reading nostruct-align/1bh0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod (nostruct-align/1bh0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.297861 /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22): Reading nostruct-align/3pnp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod (nostruct-align/3pnp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.825846 /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod(21): Reading nostruct-align/1qt9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-12727/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod (nostruct-align/1qt9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.468882 /projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod(21): Reading nostruct-align/1bh1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod (nostruct-align/1bh1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.018831 /projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod(22): Reading nostruct-align/1jpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-20976/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod (nostruct-align/1jpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.796871 /projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod(22): Reading nostruct-align/1bh3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17458/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod (nostruct-align/1bh3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.039848 /projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod(21): Reading nostruct-align/1bh4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod (nostruct-align/1bh4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.462868 /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod(22): Reading nostruct-align/1gmiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod (nostruct-align/1gmiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.327829 /projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod(22): Reading nostruct-align/1d7cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod (nostruct-align/1d7cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.128847 /projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod(22): Reading nostruct-align/1fxmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod (nostruct-align/1fxmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.533875 /projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod(22): Reading nostruct-align/1l5wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod (nostruct-align/1l5wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.665865 /projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod(22): Reading nostruct-align/1jy5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod (nostruct-align/1jy5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.497835 /projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod(21): Reading nostruct-align/1ig3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-9395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod (nostruct-align/1ig3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.592886 /projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod(22): Reading nostruct-align/1i2sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod (nostruct-align/1i2sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.728855 /projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod(22): Reading nostruct-align/1jc9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod (nostruct-align/1jc9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.655828 /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod(22): Reading nostruct-align/1bgc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-14990/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod (nostruct-align/1bgc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.383854 /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod(22): Reading nostruct-align/1lpbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod (nostruct-align/1lpbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.999840 /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod(22): Reading nostruct-align/1bgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod (nostruct-align/1bgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.733871 /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod(22): Reading nostruct-align/1qkrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod (nostruct-align/1qkrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.753876 /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod(21): Reading nostruct-align/1bgj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod (nostruct-align/1bgj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.899866 /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod(21): Reading nostruct-align/1bgk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20580/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod (nostruct-align/1bgk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.816872 /projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod(22): Reading nostruct-align/1f6yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod (nostruct-align/1f6yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.598829 /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod(22): Reading nostruct-align/1jidA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod (nostruct-align/1jidA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.220882 /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod(21): Reading nostruct-align/1auuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-5254/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod (nostruct-align/1auuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.530848 /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod(21): Reading nostruct-align/1bgp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod (nostruct-align/1bgp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.664833 /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod(21): Reading nostruct-align/1ithA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod (nostruct-align/1ithA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.782885 /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod(22): Reading nostruct-align/1bi0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-16450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod (nostruct-align/1bi0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.864853 /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod(22): Reading nostruct-align/1aa7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod (nostruct-align/1aa7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.631876 /projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod(22): Reading nostruct-align/1jpnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28803/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod (nostruct-align/1jpnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.376839 /projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod(22): Reading nostruct-align/1gmjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod (nostruct-align/1gmjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.142876 /projects/compbio/experiments/models.97/pdb/1g/1gmjC/nostruct-align/1gmjC.t2k-w0.5.mod(22): Reading nostruct-align/1gmjC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmjC/nostruct-align/1gmjC.t2k-w0.5.mod (nostruct-align/1gmjC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmjC/nostruct-align/1gmjC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.071869 /projects/compbio/experiments/models.97/pdb/1g/1gmjD/nostruct-align/1gmjD.t2k-w0.5.mod(22): Reading nostruct-align/1gmjD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30712/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmjD/nostruct-align/1gmjD.t2k-w0.5.mod (nostruct-align/1gmjD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmjD/nostruct-align/1gmjD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.035881 /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod(22): Reading nostruct-align/2sicI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod (nostruct-align/2sicI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.186869 /projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod(21): Reading nostruct-align/1e3jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15198/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod (nostruct-align/1e3jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.829845 /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod(22): Reading nostruct-align/3proC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod (nostruct-align/3proC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.216839 /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod(22): Reading nostruct-align/1i2tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod (nostruct-align/1i2tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.639843 /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod(21): Reading nostruct-align/3proD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-20883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod (nostruct-align/3proD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.418833 /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod(21): Reading nostruct-align/1bhb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-2602/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod (nostruct-align/1bhb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.365873 /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod(21): Reading nostruct-align/1dqpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-26648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod (nostruct-align/1dqpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.016846 /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod(21): Reading nostruct-align/7apiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4501/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod (nostruct-align/7apiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.050856 /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod(21): Reading nostruct-align/1bhe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3381/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod (nostruct-align/1bhe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.675835 /projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod(22): Reading nostruct-align/1emvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod (nostruct-align/1emvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.975849 /projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod(22): Reading nostruct-align/1emvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10944/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod (nostruct-align/1emvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.484848 /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod(22): Reading nostruct-align/1bl0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod (nostruct-align/1bl0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.884848 /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod(21): Reading nostruct-align/1bhi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod (nostruct-align/1bhi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.218832 /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod(21): Reading nostruct-align/1qm1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod (nostruct-align/1qm1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.037868 /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod(22): Reading nostruct-align/1qksA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod (nostruct-align/1qksA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.397860 /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod(21): Reading nostruct-align/1dxzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20558/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod (nostruct-align/1dxzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.299847 /projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod(21): Reading nostruct-align/1f88A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-28484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod (nostruct-align/1f88A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.662846 /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod(22): Reading nostruct-align/1auvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod (nostruct-align/1auvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.466852 /projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod(22): Reading nostruct-align/1kekA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-23377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod (nostruct-align/1kekA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.722879 /projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod(21): Reading nostruct-align/1irf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-27496/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod (nostruct-align/1irf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.974861 /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod(21): Reading nostruct-align/1bhp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod (nostruct-align/1bhp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.934875 /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod(21): Reading nostruct-align/1aa8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod (nostruct-align/1aa8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.075874 /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod(21): Reading nostruct-align/1irk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-19606/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod (nostruct-align/1irk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.473835 /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod(21): Reading nostruct-align/1bhu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16087/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod (nostruct-align/1bhu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.079851 /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod(21): Reading nostruct-align/1irl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-8848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod (nostruct-align/1irl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.332874 /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod(22): Reading nostruct-align/16pk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod (nostruct-align/16pk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.599852 /projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod(21): Reading nostruct-align/1noyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod (nostruct-align/1noyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.453857 /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod(21): Reading nostruct-align/1bj5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1903/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod (nostruct-align/1bj5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.638868 /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod(21): Reading nostruct-align/1iro.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod (nostruct-align/1iro.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.777845 /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod(21): Reading nostruct-align/1bj7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod (nostruct-align/1bj7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.852850 /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod(21): Reading nostruct-align/1irp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12582/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod (nostruct-align/1irp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.345852 /projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod(22): Reading nostruct-align/1k9sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3569/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod (nostruct-align/1k9sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.934835 /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod(21): Reading nostruct-align/1bj8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod (nostruct-align/1bj8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.040873 /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod(22): Reading nostruct-align/1fxoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod (nostruct-align/1fxoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.412861 /projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod(21): Reading nostruct-align/1h6oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod (nostruct-align/1h6oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.908880 /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod(21): Reading nostruct-align/1ig5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-8857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod (nostruct-align/1ig5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.940878 /projects/compbio/experiments/models.97/pdb/1i/1i2uA/nostruct-align/1i2uA.t2k-w0.5.mod(22): Reading nostruct-align/1i2uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2uA/nostruct-align/1i2uA.t2k-w0.5.mod (nostruct-align/1i2uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i2uA/nostruct-align/1i2uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.278833 /projects/compbio/experiments/models.97/pdb/1i/1irw/nostruct-align/1irw.t2k-w0.5.mod(22): Reading nostruct-align/1irw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-17961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irw/nostruct-align/1irw.t2k-w0.5.mod (nostruct-align/1irw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1irw/nostruct-align/1irw.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.653877 /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod(22): Reading nostruct-align/1bia.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod (nostruct-align/1bia.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.303873 /projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod(22): Reading nostruct-align/1dqqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod (nostruct-align/1dqqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.842848 /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod(21): Reading nostruct-align/1bib.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod (nostruct-align/1bib.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.238888 /projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod(21): Reading nostruct-align/1dqqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod (nostruct-align/1dqqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.314867 /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod(21): Reading nostruct-align/1srrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-5163/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod (nostruct-align/1srrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.137856 /projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod(21): Reading nostruct-align/1emwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-4215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod (nostruct-align/1emwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.908833 /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod(21): Reading nostruct-align/1ponA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12694/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod (nostruct-align/1ponA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.229828 /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod(21): Reading nostruct-align/1xel.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod (nostruct-align/1xel.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.439854 /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod(21): Reading nostruct-align/1bif.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod (nostruct-align/1bif.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.550833 /projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod(22): Reading nostruct-align/1big.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod (nostruct-align/1big.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.691832 /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod(21): Reading nostruct-align/1ponB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod (nostruct-align/1ponB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.066839 /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod(21): Reading nostruct-align/1xnaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16328/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod (nostruct-align/1xnaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.646847 /projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod(21): Reading nostruct-align/1f89A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-11597/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod (nostruct-align/1f89A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072836 /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod(21): Reading nostruct-align/1cfyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-12454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod (nostruct-align/1cfyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.091854 /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod(22): Reading nostruct-align/2irfG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13861/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod (nostruct-align/2irfG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.953880 /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod(22): Reading nostruct-align/1xer.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod (nostruct-align/1xer.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.589870 /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod(21): Reading nostruct-align/1auwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod (nostruct-align/1auwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.251844 /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod(22): Reading nostruct-align/1c3wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod (nostruct-align/1c3wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.725882 /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod(21): Reading nostruct-align/1bio.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-15451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod (nostruct-align/1bio.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.654844 /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod(21): Reading nostruct-align/1pvxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16400/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod (nostruct-align/1pvxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.689886 /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod(21): Reading nostruct-align/1bip.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-7810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod (nostruct-align/1bip.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.651833 /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod(21): Reading nostruct-align/1bk0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod (nostruct-align/1bk0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.869844 /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k-w0.5.mod(22): Reading nostruct-align/1lc0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k-w0.5.mod (nostruct-align/1lc0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.546879 /projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod(21): Reading nostruct-align/1bk1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod (nostruct-align/1bk1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.602867 /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod(21): Reading nostruct-align/1larA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod (nostruct-align/1larA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.333883 /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod(22): Reading nostruct-align/3eipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod (nostruct-align/3eipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.093872 /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod(21): Reading nostruct-align/1nozA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-5164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod (nostruct-align/1nozA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.220873 /projects/compbio/experiments/models.97/pdb/1g/1gmlA/nostruct-align/1gmlA.t2k-w0.5.mod(22): Reading nostruct-align/1gmlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmlA/nostruct-align/1gmlA.t2k-w0.5.mod (nostruct-align/1gmlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmlA/nostruct-align/1gmlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.089836 /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod(21): Reading nostruct-align/1bix.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod (nostruct-align/1bix.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.816881 /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod(21): Reading nostruct-align/1iso.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod (nostruct-align/1iso.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.867847 /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod(22): Reading nostruct-align/1byfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod (nostruct-align/1byfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.027874 /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod(21): Reading nostruct-align/1agdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-22913/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod (nostruct-align/1agdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.110838 /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod(21): Reading nostruct-align/1agdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod (nostruct-align/1agdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.009850 /projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod(22): Reading nostruct-align/1h6pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod (nostruct-align/1h6pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.865881 /projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod(22): Reading nostruct-align/1jy8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod (nostruct-align/1jy8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.260876 /projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod(22): Reading nostruct-align/1iexA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-29822/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod (nostruct-align/1iexA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.861879 /projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod(22): Reading nostruct-align/1culA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod (nostruct-align/1culA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.157837 /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod(21): Reading nostruct-align/1tgoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod (nostruct-align/1tgoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.064846 /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod(22): Reading nostruct-align/1efnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod (nostruct-align/1efnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.994862 /projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod(21): Reading nostruct-align/1ig6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod (nostruct-align/1ig6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.687862 /projects/compbio/experiments/models.97/pdb/1g/1gv4A/nostruct-align/1gv4A.t2k-w0.5.mod(22): Reading nostruct-align/1gv4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gv4A/nostruct-align/1gv4A.t2k-w0.5.mod (nostruct-align/1gv4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gv4A/nostruct-align/1gv4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.580856 /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod(22): Reading nostruct-align/1gtvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod (nostruct-align/1gtvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.635883 /projects/compbio/experiments/models.97/pdb/1f/1fbtA/nostruct-align/1fbtA.t2k-w0.5.mod(22): Reading nostruct-align/1fbtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30041/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbtA/nostruct-align/1fbtA.t2k-w0.5.mod (nostruct-align/1fbtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fbtA/nostruct-align/1fbtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.553856 /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod(21): Reading nostruct-align/1dqrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod (nostruct-align/1dqrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.350851 /projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod(21): Reading nostruct-align/1eo6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32465/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod (nostruct-align/1eo6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.905886 /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod(21): Reading nostruct-align/2mbr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod (nostruct-align/2mbr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.118889 /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod(21): Reading nostruct-align/4enl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod (nostruct-align/4enl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.558830 /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod(21): Reading nostruct-align/1qm3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6442/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod (nostruct-align/1qm3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.037868 /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k-w0.5.mod(22): Reading nostruct-align/1jigA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k-w0.5.mod (nostruct-align/1jigA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.829851 /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod(22): Reading nostruct-align/1cfzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod (nostruct-align/1cfzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.219866 /projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod(22): Reading nostruct-align/1euaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7760/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod (nostruct-align/1euaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.850832 /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod(21): Reading nostruct-align/1itf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-1638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod (nostruct-align/1itf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.353849 /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod(21): Reading nostruct-align/1itg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod (nostruct-align/1itg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.718843 /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod(22): Reading nostruct-align/3prn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod (nostruct-align/3prn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.860834 /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod(21): Reading nostruct-align/1bl1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod (nostruct-align/1bl1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.399828 /projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod(21): Reading nostruct-align/1fqgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod (nostruct-align/1fqgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.495852 /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod(22): Reading nostruct-align/1bjt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod (nostruct-align/1bjt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.243877 /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod(21): Reading nostruct-align/2ezh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-16742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod (nostruct-align/2ezh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.612848 /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod(21): Reading nostruct-align/2ezi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod (nostruct-align/2ezi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.988840 /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod(21): Reading nostruct-align/1itm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod (nostruct-align/1itm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.815844 /projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod(22): Reading nostruct-align/1gmmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23493/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod (nostruct-align/1gmmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.475883 /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod(21): Reading nostruct-align/2ezk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod (nostruct-align/2ezk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.732838 /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod(21): Reading nostruct-align/1bjx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod (nostruct-align/1bjx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.754833 /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod(21): Reading nostruct-align/2ezl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-11745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod (nostruct-align/2ezl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.896828 /projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod(22): Reading nostruct-align/1fxqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod (nostruct-align/1fxqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.190842 /projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod(21): Reading nostruct-align/1h6qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-2304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod (nostruct-align/1h6qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.938862 /projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod(21): Reading nostruct-align/7timA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod (nostruct-align/7timA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.861877 /projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod(22): Reading nostruct-align/1e3mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod (nostruct-align/1e3mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.297852 /projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod(22): Reading nostruct-align/1i45A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod (nostruct-align/1i45A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.592873 /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod(21): Reading nostruct-align/3monB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18099/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod (nostruct-align/3monB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.174831 /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod(21): Reading nostruct-align/1qdlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod (nostruct-align/1qdlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.178873 /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod(21): Reading nostruct-align/1fd3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4635/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod (nostruct-align/1fd3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.932863 /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod(21): Reading nostruct-align/1qdlB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod (nostruct-align/1qdlB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.977846 /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod(22): Reading nostruct-align/1dqsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod (nostruct-align/1dqsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.386875 /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod(22): Reading nostruct-align/1ds1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod (nostruct-align/1ds1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.926876 /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod(22): Reading nostruct-align/2mcm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod (nostruct-align/2mcm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.427860 /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod(22): Reading nostruct-align/1bkb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12502/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod (nostruct-align/1bkb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.091873 /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod(22): Reading nostruct-align/1bkf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod (nostruct-align/1bkf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.803869 /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod(21): Reading nostruct-align/1imbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod (nostruct-align/1imbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.211868 /projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod(21): Reading nostruct-align/1bl3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod (nostruct-align/1bl3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.543861 /projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod(21): Reading nostruct-align/3psg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod (nostruct-align/3psg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.985865 /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod(21): Reading nostruct-align/1b91A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-22104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod (nostruct-align/1b91A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.017866 /projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod(22): Reading nostruct-align/1qm4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32188/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod (nostruct-align/1qm4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.573828 /projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod(22): Reading nostruct-align/1jihA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7306/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod (nostruct-align/1jihA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.348831 /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod(22): Reading nostruct-align/1aw7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod (nostruct-align/1aw7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.715832 /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod(21): Reading nostruct-align/1auyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod (nostruct-align/1auyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.531885 /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod(21): Reading nostruct-align/1c3yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18788/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod (nostruct-align/1c3yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.456839 /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod(21): Reading nostruct-align/1latA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-28185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod (nostruct-align/1latA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.852880 /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod(21): Reading nostruct-align/1bku.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod (nostruct-align/1bku.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.783873 /projects/compbio/experiments/models.97/pdb/1g/1gmnA/nostruct-align/1gmnA.t2k-w0.5.mod(22): Reading nostruct-align/1gmnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmnA/nostruct-align/1gmnA.t2k-w0.5.mod (nostruct-align/1gmnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmnA/nostruct-align/1gmnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.438856 /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod(22): Reading nostruct-align/1bm8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod (nostruct-align/1bm8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.145874 /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod(22): Reading nostruct-align/1fxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod (nostruct-align/1fxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.077835 /projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod(22): Reading nostruct-align/1h6rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14324/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod (nostruct-align/1h6rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.133839 /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod(22): Reading nostruct-align/1h80A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod (nostruct-align/1h80A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.722849 /projects/compbio/experiments/models.97/pdb/1e/1efpB/nostruct-align/1efpB.t2k-w0.5.mod(22): Reading nostruct-align/1efpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15575/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efpB/nostruct-align/1efpB.t2k-w0.5.mod (nostruct-align/1efpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efpB/nostruct-align/1efpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.489870 /projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod(22): Reading nostruct-align/1k9vF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15305/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod (nostruct-align/1k9vF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.208836 /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod(21): Reading nostruct-align/1cunA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-7702/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod (nostruct-align/1cunA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.778839 /projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod(21): Reading nostruct-align/1ig8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14382/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod (nostruct-align/1ig8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.584862 /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod(21): Reading nostruct-align/1gtxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod (nostruct-align/1gtxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.542833 /projects/compbio/experiments/models.97/pdb/1b/1b0jA/nostruct-align/1b0jA.t2k-w0.5.mod(22): Reading nostruct-align/1b0jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-17142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0jA/nostruct-align/1b0jA.t2k-w0.5.mod (nostruct-align/1b0jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0jA/nostruct-align/1b0jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.556875 /projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod(21): Reading nostruct-align/1dqtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod (nostruct-align/1dqtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.151834 /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod(21): Reading nostruct-align/1iuz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod (nostruct-align/1iuz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.120886 /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod(22): Reading nostruct-align/1ble.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-19750/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod (nostruct-align/1ble.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.872829 /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod(21): Reading nostruct-align/3pte.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-22304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod (nostruct-align/3pte.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.534840 /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod(21): Reading nostruct-align/1bli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-19175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod (nostruct-align/1bli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.748859 /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod(21): Reading nostruct-align/1iva.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-11859/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod (nostruct-align/1iva.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.597866 /projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod(22): Reading nostruct-align/1aw8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod (nostruct-align/1aw8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.667839 /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod(22): Reading nostruct-align/1aw8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod (nostruct-align/1aw8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.914871 /projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod(22): Reading nostruct-align/1ivg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod (nostruct-align/1ivg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.928881 /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod(21): Reading nostruct-align/1tvdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod (nostruct-align/1tvdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.423887 /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod(21): Reading nostruct-align/1aw8E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10847/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod (nostruct-align/1aw8E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.522844 /projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod(22): Reading nostruct-align/1hbkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod (nostruct-align/1hbkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.725859 /projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod(22): Reading nostruct-align/1fqiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod (nostruct-align/1fqiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.243849 /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod(21): Reading nostruct-align/3il8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod (nostruct-align/3il8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.058865 /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod(21): Reading nostruct-align/1zfpE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod (nostruct-align/1zfpE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.768867 /projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod(21): Reading nostruct-align/1blu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-31742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod (nostruct-align/1blu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.918837 /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod(21): Reading nostruct-align/1bn5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod (nostruct-align/1bn5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.335829 /projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod(21): Reading nostruct-align/1cuoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod (nostruct-align/1cuoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.359856 /projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod(21): Reading nostruct-align/1e3oC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod (nostruct-align/1e3oC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.798874 /projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod(22): Reading nostruct-align/1ktbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod (nostruct-align/1ktbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.794838 /projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod(21): Reading nostruct-align/1dquA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1555/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod (nostruct-align/1dquA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.891872 /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod(21): Reading nostruct-align/1f13A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-7562/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod (nostruct-align/1f13A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.309835 /projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod(21): Reading nostruct-align/1srvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22206/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod (nostruct-align/1srvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.448887 /projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod(21): Reading nostruct-align/1eo9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod (nostruct-align/1eo9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.132849 /projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod(21): Reading nostruct-align/1eo9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod (nostruct-align/1eo9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.152874 /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod(21): Reading nostruct-align/1imdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-8363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod (nostruct-align/1imdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.991827 /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod(22): Reading nostruct-align/1bjwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod (nostruct-align/1bjwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.266836 /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod(21): Reading nostruct-align/2ms2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-4879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod (nostruct-align/2ms2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.119869 /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod(22): Reading nostruct-align/1b93A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod (nostruct-align/1b93A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.869835 /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod(21): Reading nostruct-align/1b93B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod (nostruct-align/1b93B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.738832 /projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod(21): Reading nostruct-align/2rmcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod (nostruct-align/2rmcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.522888 /projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod(22): Reading nostruct-align/1kepA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod (nostruct-align/1kepA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.707842 /projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod(22): Reading nostruct-align/1eudA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod (nostruct-align/1eudA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.608849 /projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod(21): Reading nostruct-align/1bmp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod (nostruct-align/1bmp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.380880 /projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod(22): Reading nostruct-align/1eudB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod (nostruct-align/1eudB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.086878 /projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod(21): Reading nostruct-align/1bmr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod (nostruct-align/1bmr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.608831 /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod(22): Reading nostruct-align/1qsaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod (nostruct-align/1qsaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.808886 /projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod(22): Reading nostruct-align/1fqjC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2120/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod (nostruct-align/1fqjC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.137835 /projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod(22): Reading nostruct-align/1jr2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13847/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod (nostruct-align/1jr2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.223852 /projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod(21): Reading nostruct-align/1jqSB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod (nostruct-align/1jqSB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.222878 /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod(21): Reading nostruct-align/1gmpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23324/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod (nostruct-align/1gmpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479868 /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod(21): Reading nostruct-align/3bbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod (nostruct-align/3bbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.831829 /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod(21): Reading nostruct-align/1bmx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod (nostruct-align/1bmx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.995884 /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod(21): Reading nostruct-align/2dorA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod (nostruct-align/2dorA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.491858 /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod(22): Reading nostruct-align/1h6tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod (nostruct-align/1h6tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.593868 /projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod(21): Reading nostruct-align/1e3pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-26146/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod (nostruct-align/1e3pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.181843 /projects/compbio/experiments/models.97/pdb/1g/1gtzA/nostruct-align/1gtzA.t2k-w0.5.mod(22): Reading nostruct-align/1gtzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtzA/nostruct-align/1gtzA.t2k-w0.5.mod (nostruct-align/1gtzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gtzA/nostruct-align/1gtzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.273855 /projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod(22): Reading nostruct-align/1ds4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod (nostruct-align/1ds4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.000839 /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod(21): Reading nostruct-align/1bnb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod (nostruct-align/1bnb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.871872 /projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod(21): Reading nostruct-align/1ucyE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-30224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod (nostruct-align/1ucyE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.269869 /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod(21): Reading nostruct-align/1tgsI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod (nostruct-align/1tgsI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.377867 /projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod(21): Reading nostruct-align/1ucyH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29313/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod (nostruct-align/1ucyH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.449873 /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod(22): Reading nostruct-align/1xjo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod (nostruct-align/1xjo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.319880 /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod(21): Reading nostruct-align/1ixa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod (nostruct-align/1ixa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.555838 /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod(22): Reading nostruct-align/1hxiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod (nostruct-align/1hxiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.391834 /projects/compbio/experiments/models.97/pdb/1l/1ly1A/nostruct-align/1ly1A.t2k-w0.5.mod(22): Reading nostruct-align/1ly1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-20366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ly1A/nostruct-align/1ly1A.t2k-w0.5.mod (nostruct-align/1ly1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ly1A/nostruct-align/1ly1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.863853 /projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod(21): Reading nostruct-align/1bno.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-30594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod (nostruct-align/1bno.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.891842 /projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod(21): Reading nostruct-align/1eueA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod (nostruct-align/1eueA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.720871 /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod(22): Reading nostruct-align/1ixh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14486/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod (nostruct-align/1ixh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.390842 /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod(21): Reading nostruct-align/2hgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod (nostruct-align/2hgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.076851 /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k-w0.5.mod(22): Reading nostruct-align/1lc5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k-w0.5.mod (nostruct-align/1lc5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.516850 /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod(21): Reading nostruct-align/1bp1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod (nostruct-align/1bp1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.405886 /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod(21): Reading nostruct-align/1d0aB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod (nostruct-align/1d0aB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.001877 /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod(21): Reading nostruct-align/1nal1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13163/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod (nostruct-align/1nal1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.509880 /projects/compbio/experiments/models.97/pdb/1j/1jr3A/nostruct-align/1jr3A.t2k-w0.5.mod(22): Reading nostruct-align/1jr3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr3A/nostruct-align/1jr3A.t2k-w0.5.mod (nostruct-align/1jr3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr3A/nostruct-align/1jr3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.326849 /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod(21): Reading nostruct-align/1nal3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19422/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod (nostruct-align/1nal3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.447832 /projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod(22): Reading nostruct-align/1jr3E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod (nostruct-align/1jr3E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.126839 /projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod(22): Reading nostruct-align/1d7kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8710/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod (nostruct-align/1d7kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.863884 /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod(22): Reading nostruct-align/1bykA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod (nostruct-align/1bykA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.607880 /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod(21): Reading nostruct-align/1hiwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod (nostruct-align/1hiwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.142872 /projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod(22): Reading nostruct-align/1h6uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2944/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod (nostruct-align/1h6uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.189888 /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k-w0.5.mod(22): Reading nostruct-align/1gv9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-26535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k-w0.5.mod (nostruct-align/1gv9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.633839 /projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod(21): Reading nostruct-align/1i49A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-3747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod (nostruct-align/1i49A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.878845 /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod(22): Reading nostruct-align/1dqwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod (nostruct-align/1dqwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.651861 /projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod(21): Reading nostruct-align/1f15A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-26084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod (nostruct-align/1f15A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.646851 /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod(21): Reading nostruct-align/1bob.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod (nostruct-align/1bob.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.361855 /projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod(21): Reading nostruct-align/1f15B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30722/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod (nostruct-align/1f15B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.593832 /projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod(21): Reading nostruct-align/1jbbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod (nostruct-align/1jbbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.952854 /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod(21): Reading nostruct-align/1k89.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15687/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod (nostruct-align/1k89.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.588835 /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod(22): Reading nostruct-align/3bct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod (nostruct-align/3bct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.461834 /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod(22): Reading nostruct-align/1sknP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod (nostruct-align/1sknP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.338852 /projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod(22): Reading nostruct-align/1jilA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod (nostruct-align/1jilA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.799883 /projects/compbio/experiments/models.97/pdb/1l/1ly2A/nostruct-align/1ly2A.t2k-w0.5.mod(22): Reading nostruct-align/1ly2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ly2A/nostruct-align/1ly2A.t2k-w0.5.mod (nostruct-align/1ly2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ly2A/nostruct-align/1ly2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.997850 /projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod(21): Reading nostruct-align/1g3fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod (nostruct-align/1g3fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.480860 /projects/compbio/experiments/models.97/pdb/1i/1itpA/nostruct-align/1itpA.t2k-w0.5.mod(22): Reading nostruct-align/1itpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3433/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itpA/nostruct-align/1itpA.t2k-w0.5.mod (nostruct-align/1itpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itpA/nostruct-align/1itpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.111883 /projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod(22): Reading nostruct-align/1kg0C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod (nostruct-align/1kg0C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.527834 /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod(21): Reading nostruct-align/2ts1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-27419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod (nostruct-align/2ts1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.872879 /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod(21): Reading nostruct-align/1bor.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod (nostruct-align/1bor.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.895868 /projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod(21): Reading nostruct-align/1bq0.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-12938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod (nostruct-align/1bq0.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.279882 /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod(21): Reading nostruct-align/1d0bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11677/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod (nostruct-align/1d0bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.704851 /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod(22): Reading nostruct-align/1hbnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod (nostruct-align/1hbnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.627865 /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod(22): Reading nostruct-align/1hbnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5259/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod (nostruct-align/1hbnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.561869 /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod(21): Reading nostruct-align/1qba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod (nostruct-align/1qba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.648855 /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod(22): Reading nostruct-align/1hbnC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod (nostruct-align/1hbnC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.412878 /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod(21): Reading nostruct-align/1boy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod (nostruct-align/1boy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.987843 /projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod(21): Reading nostruct-align/1djnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod (nostruct-align/1djnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.632837 /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod(21): Reading nostruct-align/1bylA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod (nostruct-align/1bylA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.422844 /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod(22): Reading nostruct-align/1agjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22436/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod (nostruct-align/1agjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.251883 /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod(21): Reading nostruct-align/1liaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod (nostruct-align/1liaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.749861 /projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod(21): Reading nostruct-align/1cw0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod (nostruct-align/1cw0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.743849 /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod(21): Reading nostruct-align/1iyu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17449/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod (nostruct-align/1iyu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.319885 /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod(22): Reading nostruct-align/1bcpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod (nostruct-align/1bcpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.157875 /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod(22): Reading nostruct-align/1b0nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod (nostruct-align/1b0nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.167862 /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod(22): Reading nostruct-align/1bcpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod (nostruct-align/1bcpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.839861 /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod(22): Reading nostruct-align/1b0nB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18053/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod (nostruct-align/1b0nB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.893854 /projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod(21): Reading nostruct-align/1f16A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod (nostruct-align/1f16A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.201832 /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod(22): Reading nostruct-align/1bcpD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod (nostruct-align/1bcpD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.459841 /projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod(21): Reading nostruct-align/1bpb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod (nostruct-align/1bpb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.339876 /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod(21): Reading nostruct-align/1ca4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-31455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod (nostruct-align/1ca4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.044884 /projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod(21): Reading nostruct-align/1ds6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-5349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod (nostruct-align/1ds6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.945868 /projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod(22): Reading nostruct-align/1bcpF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod (nostruct-align/1bcpF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.233870 /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod(21): Reading nostruct-align/2mhr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod (nostruct-align/2mhr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.517849 /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod(21): Reading nostruct-align/1bl8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-15268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod (nostruct-align/1bl8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.314837 /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod(21): Reading nostruct-align/1bpi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod (nostruct-align/1bpi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.032879 /projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod(21): Reading nostruct-align/2mhu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod (nostruct-align/2mhu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.329855 /projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod(21): Reading nostruct-align/1qm9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2072/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod (nostruct-align/1qm9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.325840 /projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod(21): Reading nostruct-align/1fjcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30581/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod (nostruct-align/1fjcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.182871 /projects/compbio/experiments/models.97/pdb/1h/1hxkA/nostruct-align/1hxkA.t2k-w0.5.mod(22): Reading nostruct-align/1hxkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-23333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxkA/nostruct-align/1hxkA.t2k-w0.5.mod (nostruct-align/1hxkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxkA/nostruct-align/1hxkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.088869 /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod(22): Reading nostruct-align/1dceA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-9164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod (nostruct-align/1dceA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.339830 /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod(22): Reading nostruct-align/1dceB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod (nostruct-align/1dceB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.931837 /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod(22): Reading nostruct-align/1d0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod (nostruct-align/1d0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.144882 /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod(22): Reading nostruct-align/1qsdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod (nostruct-align/1qsdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.341856 /projects/compbio/experiments/models.97/pdb/1j/1jr5A/nostruct-align/1jr5A.t2k-w0.5.mod(22): Reading nostruct-align/1jr5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr5A/nostruct-align/1jr5A.t2k-w0.5.mod (nostruct-align/1jr5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr5A/nostruct-align/1jr5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.736839 /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod(22): Reading nostruct-align/1urnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod (nostruct-align/1urnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.298874 /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod(21): Reading nostruct-align/4tgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod (nostruct-align/4tgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.148888 /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod(21): Reading nostruct-align/1bpv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod (nostruct-align/1bpv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.055874 /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod(21): Reading nostruct-align/1pov1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod (nostruct-align/1pov1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.187857 /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod(22): Reading nostruct-align/1br9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6160/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod (nostruct-align/1br9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.522835 /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod(22): Reading nostruct-align/1d7mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23660/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod (nostruct-align/1d7mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.931885 /projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod(22): Reading nostruct-align/1h6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod (nostruct-align/1h6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.688885 /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod(22): Reading nostruct-align/1a4iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod (nostruct-align/1a4iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.459831 /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod(21): Reading nostruct-align/1a4iB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-4107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod (nostruct-align/1a4iB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.469877 /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod(21): Reading nostruct-align/1efuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod (nostruct-align/1efuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.696836 /projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod(21): Reading nostruct-align/1fd9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod (nostruct-align/1fd9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.587887 /projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod(21): Reading nostruct-align/7catA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4285/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod (nostruct-align/7catA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.482883 /projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod(21): Reading nostruct-align/1dqyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28452/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod (nostruct-align/1dqyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.705885 /projects/compbio/experiments/models.97/pdb/1l/1lplA/nostruct-align/1lplA.t2k-w0.5.mod(22): Reading nostruct-align/1lplA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-30646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lplA/nostruct-align/1lplA.t2k-w0.5.mod (nostruct-align/1lplA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lplA/nostruct-align/1lplA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.183857 /projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod(22): Reading nostruct-align/2dabA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3256/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod (nostruct-align/2dabA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.562832 /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod(21): Reading nostruct-align/1bqg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod (nostruct-align/1bqg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.426830 /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod(21): Reading nostruct-align/1ospH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-30434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod (nostruct-align/1ospH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.078840 /projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod(21): Reading nostruct-align/1b7yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod (nostruct-align/1b7yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.298832 /projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod(22): Reading nostruct-align/1b7yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod (nostruct-align/1b7yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.386885 /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod(21): Reading nostruct-align/1bqk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9698/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod (nostruct-align/1bqk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.330885 /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod(21): Reading nostruct-align/1ospL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-19189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod (nostruct-align/1ospL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.641857 /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod(21): Reading nostruct-align/1euhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-14241/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod (nostruct-align/1euhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.679867 /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod(22): Reading nostruct-align/1dcfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod (nostruct-align/1dcfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.264887 /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod(22): Reading nostruct-align/1ospO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod (nostruct-align/1ospO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.425873 /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod(22): Reading nostruct-align/1d0dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23444/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod (nostruct-align/1d0dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.174889 /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod(22): Reading nostruct-align/3pyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod (nostruct-align/3pyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.730837 /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod(21): Reading nostruct-align/1bqt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod (nostruct-align/1bqt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.609875 /projects/compbio/experiments/models.97/pdb/1j/1jpxA/nostruct-align/1jpxA.t2k-w0.5.mod(22): Reading nostruct-align/1jpxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9081/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpxA/nostruct-align/1jpxA.t2k-w0.5.mod (nostruct-align/1jpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpxA/nostruct-align/1jpxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.838829 /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod(22): Reading nostruct-align/1uroA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod (nostruct-align/1uroA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.515850 /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod(21): Reading nostruct-align/1bqv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-21101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod (nostruct-align/1bqv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.769835 /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod(22): Reading nostruct-align/2bpa1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod (nostruct-align/2bpa1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.213850 /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod(21): Reading nostruct-align/1bqz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod (nostruct-align/1bqz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.283842 /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod(21): Reading nostruct-align/1olgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod (nostruct-align/1olgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.609873 /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod(22): Reading nostruct-align/2bpa2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod (nostruct-align/2bpa2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.211830 /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod(21): Reading nostruct-align/1bs9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-4571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod (nostruct-align/1bs9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.247877 /projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod(21): Reading nostruct-align/1bynA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod (nostruct-align/1bynA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.927837 /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod(22): Reading nostruct-align/2bpa3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod (nostruct-align/2bpa3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.449844 /projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod(22): Reading nostruct-align/1fxxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod (nostruct-align/1fxxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.492855 /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod(22): Reading nostruct-align/1xnb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod (nostruct-align/1xnb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.032881 /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod(22): Reading nostruct-align/1efvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod (nostruct-align/1efvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.255857 /projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod(21): Reading nostruct-align/1e52A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-23300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod (nostruct-align/1e52A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.410837 /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod(22): Reading nostruct-align/1efvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24798/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod (nostruct-align/1efvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.567863 /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k-w0.5.mod(22): Reading nostruct-align/1ktgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-1395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k-w0.5.mod (nostruct-align/1ktgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.757870 /projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod(21): Reading nostruct-align/1b0pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod (nostruct-align/1b0pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.022879 /projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod(21): Reading nostruct-align/1qdp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9882/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod (nostruct-align/1qdp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.871832 /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod(22): Reading nostruct-align/1dqzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod (nostruct-align/1dqzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.520878 /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod(22): Reading nostruct-align/1jbeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-29113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod (nostruct-align/1jbeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.473864 /projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod(21): Reading nostruct-align/1hqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod (nostruct-align/1hqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.132851 /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod(21): Reading nostruct-align/1brd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-21992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod (nostruct-align/1brd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.955845 /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod(22): Reading nostruct-align/2fokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod (nostruct-align/2fokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.764879 /projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod(21): Reading nostruct-align/1f7cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod (nostruct-align/1f7cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.138880 /projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod(21): Reading nostruct-align/1hxmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27659/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod (nostruct-align/1hxmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.961842 /projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod(21): Reading nostruct-align/1hxmD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod (nostruct-align/1hxmD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.777834 /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod(21): Reading nostruct-align/1rvv1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod (nostruct-align/1rvv1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.346853 /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod(21): Reading nostruct-align/1brt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4348/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod (nostruct-align/1brt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.582888 /projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod(22): Reading nostruct-align/1jpyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod (nostruct-align/1jpyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.778866 /projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod(22): Reading nostruct-align/1jr7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod (nostruct-align/1jr7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.035873 /projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod(21): Reading nostruct-align/1jpyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-30331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod (nostruct-align/1jpyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.662868 /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod(22): Reading nostruct-align/1gmuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod (nostruct-align/1gmuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.462870 /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod(21): Reading nostruct-align/2fal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod (nostruct-align/2fal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.437876 /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod(22): Reading nostruct-align/1brz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod (nostruct-align/1brz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.496832 /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod(21): Reading nostruct-align/1d7oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-5653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod (nostruct-align/1d7oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.564840 /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod(22): Reading nostruct-align/1go3E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod (nostruct-align/1go3E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.858871 /projects/compbio/experiments/models.97/pdb/1h/1h6yA/nostruct-align/1h6yA.t2k-w0.5.mod(22): Reading nostruct-align/1h6yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9190/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6yA/nostruct-align/1h6yA.t2k-w0.5.mod (nostruct-align/1h6yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6yA/nostruct-align/1h6yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.974840 /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod(22): Reading nostruct-align/1go3F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21178/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod (nostruct-align/1go3F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.090845 /projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod(21): Reading nostruct-align/7pcy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-24996/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod (nostruct-align/7pcy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.195850 /projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod(21): Reading nostruct-align/1a4kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-16690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod (nostruct-align/1a4kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.520874 /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod(21): Reading nostruct-align/1phnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod (nostruct-align/1phnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.874872 /projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod(21): Reading nostruct-align/1e3uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod (nostruct-align/1e3uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.546846 /projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod(21): Reading nostruct-align/1e53A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-10439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod (nostruct-align/1e53A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.591835 /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod(21): Reading nostruct-align/1phnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod (nostruct-align/1phnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.053841 /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod(21): Reading nostruct-align/1tgxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod (nostruct-align/1tgxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.309887 /projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod(22): Reading nostruct-align/2mjpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod (nostruct-align/2mjpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.875853 /projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod(21): Reading nostruct-align/1rvvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod (nostruct-align/1rvvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.319883 /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod(22): Reading nostruct-align/1kthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27977/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod (nostruct-align/1kthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.030867 /projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod(21): Reading nostruct-align/1ds9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-32460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod (nostruct-align/1ds9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -30.028843 /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod(21): Reading nostruct-align/1napA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod (nostruct-align/1napA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.786875 /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod(21): Reading nostruct-align/1poxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod (nostruct-align/1poxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.039835 /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod(22): Reading nostruct-align/1toaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod (nostruct-align/1toaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.724834 /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod(21): Reading nostruct-align/1bsg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod (nostruct-align/1bsg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.727888 /projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod(22): Reading nostruct-align/1jipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod (nostruct-align/1jipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.241879 /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod(21): Reading nostruct-align/1f7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod (nostruct-align/1f7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.157885 /projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod(21): Reading nostruct-align/1eujA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod (nostruct-align/1eujA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.814850 /projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod(21): Reading nostruct-align/1g3jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod (nostruct-align/1g3jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.640854 /projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod(21): Reading nostruct-align/1kevA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25463/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod (nostruct-align/1kevA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.971857 /projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod(21): Reading nostruct-align/1g3jB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27031/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod (nostruct-align/1g3jB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.584883 /projects/compbio/experiments/models.97/pdb/1k/1k42A/nostruct-align/1k42A.t2k-w0.5.mod(22): Reading nostruct-align/1k42A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k42A/nostruct-align/1k42A.t2k-w0.5.mod (nostruct-align/1k42A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k42A/nostruct-align/1k42A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.532862 /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod(21): Reading nostruct-align/1dchA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod (nostruct-align/1dchA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.764835 /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod(21): Reading nostruct-align/1brfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-28212/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod (nostruct-align/1brfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.668829 /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod(21): Reading nostruct-align/1qsgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod (nostruct-align/1qsgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.722837 /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod(22): Reading nostruct-align/1jr8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod (nostruct-align/1jr8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.415884 /projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod(22): Reading nostruct-align/2pfkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod (nostruct-align/2pfkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.925873 /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod(22): Reading nostruct-align/1jpzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-17753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod (nostruct-align/1jpzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.274860 /projects/compbio/experiments/models.97/pdb/1g/1go4A/nostruct-align/1go4A.t2k-w0.5.mod(22): Reading nostruct-align/1go4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-31025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go4A/nostruct-align/1go4A.t2k-w0.5.mod (nostruct-align/1go4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1go4A/nostruct-align/1go4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.710871 /projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod(21): Reading nostruct-align/1dl0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod (nostruct-align/1dl0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.042887 /projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod(21): Reading nostruct-align/1bypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod (nostruct-align/1bypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.511835 /projects/compbio/experiments/models.97/pdb/1g/1go4E/nostruct-align/1go4E.t2k-w0.5.mod(22): Reading nostruct-align/1go4E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go4E/nostruct-align/1go4E.t2k-w0.5.mod (nostruct-align/1go4E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1go4E/nostruct-align/1go4E.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.703876 /projects/compbio/experiments/models.97/pdb/1h/1h6zA/nostruct-align/1h6zA.t2k-w0.5.mod(22): Reading nostruct-align/1h6zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-4173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6zA/nostruct-align/1h6zA.t2k-w0.5.mod (nostruct-align/1h6zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h6zA/nostruct-align/1h6zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.529844 /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod(21): Reading nostruct-align/1xpa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod (nostruct-align/1xpa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.972876 /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod(21): Reading nostruct-align/1agnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-1941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod (nostruct-align/1agnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.182861 /projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod(21): Reading nostruct-align/1djrD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod (nostruct-align/1djrD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.074835 /projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod(21): Reading nostruct-align/1fxzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-12748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod (nostruct-align/1fxzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.791868 /projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod(22): Reading nostruct-align/1e54A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31041/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod (nostruct-align/1e54A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.399866 /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod(21): Reading nostruct-align/1b20A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod (nostruct-align/1b20A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.106855 /projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod(22): Reading nostruct-align/1jbgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod (nostruct-align/1jbgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.969885 /projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod(22): Reading nostruct-align/1anxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod (nostruct-align/1anxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.481833 /projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod(21): Reading nostruct-align/1ap6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod (nostruct-align/1ap6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.013830 /projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod(21): Reading nostruct-align/2mlp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod (nostruct-align/2mlp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.609840 /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod(22): Reading nostruct-align/1d7pM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod (nostruct-align/1d7pM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.906878 /projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod(22): Reading nostruct-align/1fjgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod (nostruct-align/1fjgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.683849 /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod(21): Reading nostruct-align/1btl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-12474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod (nostruct-align/1btl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.754847 /projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod(22): Reading nostruct-align/1fjgC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod (nostruct-align/1fjgC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.104860 /projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod(21): Reading nostruct-align/1fjgD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3801/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod (nostruct-align/1fjgD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.976883 /projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod(21): Reading nostruct-align/1avaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-26403/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod (nostruct-align/1avaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.986870 /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod(22): Reading nostruct-align/1btn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod (nostruct-align/1btn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.737883 /projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod(22): Reading nostruct-align/1kewA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod (nostruct-align/1kewA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.766888 /projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod(22): Reading nostruct-align/1g3kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod (nostruct-align/1g3kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.274876 /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod(21): Reading nostruct-align/1avaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod (nostruct-align/1avaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.033852 /projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod(21): Reading nostruct-align/1btq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-25194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod (nostruct-align/1btq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.569878 /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading nostruct-align/1dciA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod . Average NLL-Simple NULL score: -36.476856 /projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod(22): Reading nostruct-align/1fjgI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod (nostruct-align/1fjgI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.517876 /projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod(21): Reading nostruct-align/1bts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod (nostruct-align/1bts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.288847 /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod(22): Reading nostruct-align/1bv1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod (nostruct-align/1bv1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.827831 /projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod(22): Reading nostruct-align/1fjgJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod (nostruct-align/1fjgJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.712856 /projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod(22): Reading nostruct-align/1fjgK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod (nostruct-align/1fjgK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.572872 /projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod(21): Reading nostruct-align/2pflA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3364/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod (nostruct-align/2pflA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.280859 /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod(22): Reading nostruct-align/1btu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-19546/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod (nostruct-align/1btu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.734869 /projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod(22): Reading nostruct-align/1fjgL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod (nostruct-align/1fjgL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.515865 /projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod(22): Reading nostruct-align/1fjgM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod (nostruct-align/1fjgM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.654871 /projects/compbio/experiments/models.97/pdb/1g/1go5A/nostruct-align/1go5A.t2k-w0.5.mod(22): Reading nostruct-align/1go5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go5A/nostruct-align/1go5A.t2k-w0.5.mod (nostruct-align/1go5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1go5A/nostruct-align/1go5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.218876 /projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod(22): Reading nostruct-align/1fjgN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod (nostruct-align/1fjgN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.403854 /projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod(22): Reading nostruct-align/1fjgP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod (nostruct-align/1fjgP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.620882 /projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod(22): Reading nostruct-align/1fjgQ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20857/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod (nostruct-align/1fjgQ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.652866 /projects/compbio/experiments/models.97/pdb/1f/1fjgR/nostruct-align/1fjgR.t2k-w0.5.mod(22): Reading nostruct-align/1fjgR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-28755/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgR/nostruct-align/1fjgR.t2k-w0.5.mod (nostruct-align/1fjgR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgR/nostruct-align/1fjgR.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.300880 /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod(22): Reading nostruct-align/1byqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24379/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod (nostruct-align/1byqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.760868 /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod(21): Reading nostruct-align/1d7qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod (nostruct-align/1d7qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.937828 /projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod(22): Reading nostruct-align/1fjgS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod (nostruct-align/1fjgS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.396877 /projects/compbio/experiments/models.97/pdb/1h/1h89A/nostruct-align/1h89A.t2k-w0.5.mod(22): Reading nostruct-align/1h89A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8807/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h89A/nostruct-align/1h89A.t2k-w0.5.mod (nostruct-align/1h89A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h89A/nostruct-align/1h89A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.388842 /projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod(22): Reading nostruct-align/1fjgT.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod (nostruct-align/1fjgT.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.967882 /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod(21): Reading nostruct-align/1a4mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-4116/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod (nostruct-align/1a4mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.644833 /projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod(22): Reading nostruct-align/1efyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10163/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod (nostruct-align/1efyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.018833 /projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod(22): Reading nostruct-align/1eh7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod (nostruct-align/1eh7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.050861 /projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod(22): Reading nostruct-align/1fjgV.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod (nostruct-align/1fjgV.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.447838 /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod(21): Reading nostruct-align/2fcr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18710/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod (nostruct-align/2fcr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.993889 /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod(21): Reading nostruct-align/1cw5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod (nostruct-align/1cw5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.605867 /projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod(21): Reading nostruct-align/1e55A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod (nostruct-align/1e55A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.993879 /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod(22): Reading nostruct-align/1be3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod (nostruct-align/1be3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.387878 /projects/compbio/experiments/models.97/pdb/1k/1ktjA/nostruct-align/1ktjA.t2k-w0.5.mod(22): Reading nostruct-align/1ktjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktjA/nostruct-align/1ktjA.t2k-w0.5.mod (nostruct-align/1ktjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktjA/nostruct-align/1ktjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.218887 /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod(21): Reading nostruct-align/1be3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod (nostruct-align/1be3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.818861 /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod(22): Reading nostruct-align/1be3C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod (nostruct-align/1be3C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.151838 /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod(21): Reading nostruct-align/1be3D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-22457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod (nostruct-align/1be3D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.491831 /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod(21): Reading nostruct-align/1ca9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9660/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod (nostruct-align/1ca9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.299858 /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod(21): Reading nostruct-align/1be3F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-4078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod (nostruct-align/1be3F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.558846 /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod(22): Reading nostruct-align/1be3G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod (nostruct-align/1be3G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.335873 /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod(21): Reading nostruct-align/1be3H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12808/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod (nostruct-align/1be3H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.237854 /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod(22): Reading nostruct-align/1be3I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod (nostruct-align/1be3I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.482849 /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod(21): Reading nostruct-align/1be3J.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23172/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod (nostruct-align/1be3J.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.722862 /projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod(22): Reading nostruct-align/1be3K.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2949/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod (nostruct-align/1be3K.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.296871 /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod(22): Reading nostruct-align/1fjhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod (nostruct-align/1fjhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.892832 /projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod(21): Reading nostruct-align/1fjhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-16245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod (nostruct-align/1fjhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.991840 /projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod(21): Reading nostruct-align/1jk0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-27657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod (nostruct-align/1jk0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.566851 /projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod(22): Reading nostruct-align/1jk0B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod (nostruct-align/1jk0B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.449842 /projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod(22): Reading nostruct-align/1eulA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-11076/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod (nostruct-align/1eulA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.151861 /projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod(21): Reading nostruct-align/1dcjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod (nostruct-align/1dcjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.435886 /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod(22): Reading nostruct-align/1hd2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod (nostruct-align/1hd2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.869852 /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod(21): Reading nostruct-align/1bw3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24442/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod (nostruct-align/1bw3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.020887 /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod(21): Reading nostruct-align/1bw4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod (nostruct-align/1bw4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.020887 /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod(21): Reading nostruct-align/4mbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod (nostruct-align/4mbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.931864 /projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod(21): Reading nostruct-align/1bw5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod (nostruct-align/1bw5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.281847 /projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod(21): Reading nostruct-align/1fs0E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod (nostruct-align/1fs0E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.755865 /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod(22): Reading nostruct-align/1gmxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod (nostruct-align/1gmxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.416836 /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod(21): Reading nostruct-align/1tocR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod (nostruct-align/1tocR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.009878 /projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod(21): Reading nostruct-align/1djtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod (nostruct-align/1djtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.413860 /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod(22): Reading nostruct-align/1dl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod (nostruct-align/1dl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.487869 /projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod(21): Reading nostruct-align/1fs0G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32392/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod (nostruct-align/1fs0G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.076841 /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod(22): Reading nostruct-align/1byrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod (nostruct-align/1byrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.073874 /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod(22): Reading nostruct-align/2fdn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod (nostruct-align/2fdn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.220865 /projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod(22): Reading nostruct-align/1eh8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod (nostruct-align/1eh8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.305847 /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod(21): Reading nostruct-align/1memA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod (nostruct-align/1memA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.994869 /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod(22): Reading nostruct-align/1qf5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod (nostruct-align/1qf5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.666832 /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod(21): Reading nostruct-align/1b22A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod (nostruct-align/1b22A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.182838 /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod(21): Reading nostruct-align/1bvb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod (nostruct-align/1bvb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.767878 /projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod(21): Reading nostruct-align/1jbiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod (nostruct-align/1jbiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.094851 /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod(21): Reading nostruct-align/2mnr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-20086/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod (nostruct-align/2mnr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.578886 /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod(21): Reading nostruct-align/1bvh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30433/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod (nostruct-align/1bvh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.890884 /projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod(21): Reading nostruct-align/1eumA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-11216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod (nostruct-align/1eumA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.124836 /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod(21): Reading nostruct-align/2dhqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-3730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod (nostruct-align/2dhqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.221846 /projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod(22): Reading nostruct-align/1dckA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27321/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod (nostruct-align/1dckA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.260860 /projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod(22): Reading nostruct-align/1d0iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod (nostruct-align/1d0iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.248875 /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod(22): Reading nostruct-align/1fs1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod (nostruct-align/1fs1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.286875 /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod(22): Reading nostruct-align/1fs1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod (nostruct-align/1fs1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.302879 /projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod(22): Reading nostruct-align/1cnoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod (nostruct-align/1cnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.224873 /projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod(21): Reading nostruct-align/1zncA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-30483/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod (nostruct-align/1zncA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.313858 /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod(22): Reading nostruct-align/1bx7.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod (nostruct-align/1bx7.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.907871 /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod(22): Reading nostruct-align/1agqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod (nostruct-align/1agqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.283831 /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod(21): Reading nostruct-align/1agqD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod (nostruct-align/1agqD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.010874 /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod(21): Reading nostruct-align/1nwpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod (nostruct-align/1nwpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.352875 /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod(21): Reading nostruct-align/1qf6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-10386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod (nostruct-align/1qf6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.239851 /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod(22): Reading nostruct-align/1b0uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod (nostruct-align/1b0uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.003843 /projects/compbio/experiments/models.97/pdb/1j/1jbjA/nostruct-align/1jbjA.t2k-w0.5.mod(22): Reading nostruct-align/1jbjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11270/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbjA/nostruct-align/1jbjA.t2k-w0.5.mod (nostruct-align/1jbjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbjA/nostruct-align/1jbjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.264887 /projects/compbio/experiments/models.97/pdb/1l/1lr0A/nostruct-align/1lr0A.t2k-w0.5.mod(22): Reading nostruct-align/1lr0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-5775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lr0A/nostruct-align/1lr0A.t2k-w0.5.mod (nostruct-align/1lr0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lr0A/nostruct-align/1lr0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.372877 /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod(21): Reading nostruct-align/1xsm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod (nostruct-align/1xsm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.413830 /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod(21): Reading nostruct-align/1qlaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod (nostruct-align/1qlaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.028873 /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod(22): Reading nostruct-align/1fjjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod (nostruct-align/1fjjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.008856 /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod(22): Reading nostruct-align/1qlaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod (nostruct-align/1qlaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.817867 /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod(22): Reading nostruct-align/1qlaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod (nostruct-align/1qlaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.622845 /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod(22): Reading nostruct-align/1hxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod (nostruct-align/1hxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.062880 /projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod(22): Reading nostruct-align/1kezA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod (nostruct-align/1kezA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.819860 /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod(22): Reading nostruct-align/1itxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod (nostruct-align/1itxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.908869 /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod(22): Reading nostruct-align/1fqtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod (nostruct-align/1fqtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.795858 /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod(22): Reading nostruct-align/1by2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod (nostruct-align/1by2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.598845 /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod(22): Reading nostruct-align/2bc2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod (nostruct-align/2bc2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.441843 /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod(22): Reading nostruct-align/2bc2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-3354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod (nostruct-align/2bc2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.642866 /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod(21): Reading nostruct-align/1bwx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod (nostruct-align/1bwx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.018860 /projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod(21): Reading nostruct-align/1by9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-31437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod (nostruct-align/1by9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.177832 /projects/compbio/experiments/models.97/pdb/1l/1liiA/nostruct-align/1liiA.t2k-w0.5.mod(22): Reading nostruct-align/1liiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-1520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1liiA/nostruct-align/1liiA.t2k-w0.5.mod (nostruct-align/1liiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1liiA/nostruct-align/1liiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.603861 /projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod(22): Reading nostruct-align/1a4pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25167/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod (nostruct-align/1a4pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.889853 /projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod(22): Reading nostruct-align/1hxs1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod (nostruct-align/1hxs1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.333830 /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod(21): Reading nostruct-align/5pti.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod (nostruct-align/5pti.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.061850 /projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod(22): Reading nostruct-align/1hxs2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod (nostruct-align/1hxs2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.916874 /projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod(21): Reading nostruct-align/3blm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-31085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod (nostruct-align/3blm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.616846 /projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod(22): Reading nostruct-align/1hxs3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod (nostruct-align/1hxs3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.942858 /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod(22): Reading nostruct-align/1e58A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod (nostruct-align/1e58A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.980883 /projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod(22): Reading nostruct-align/1i3cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19773/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod (nostruct-align/1i3cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.599857 /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod(21): Reading nostruct-align/1agrE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod (nostruct-align/1agrE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.279837 /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod(22): Reading nostruct-align/1b24A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod (nostruct-align/1b24A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.404831 /projects/compbio/experiments/models.97/pdb/1j/1jbkA/nostruct-align/1jbkA.t2k-w0.5.mod(22): Reading nostruct-align/1jbkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-30109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbkA/nostruct-align/1jbkA.t2k-w0.5.mod (nostruct-align/1jbkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbkA/nostruct-align/1jbkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.522879 /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod(21): Reading nostruct-align/1agrH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-2358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod (nostruct-align/1agrH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.800833 /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod(22): Reading nostruct-align/5ptp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod (nostruct-align/5ptp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.004843 /projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod(21): Reading nostruct-align/1imoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-17162/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod (nostruct-align/1imoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.443850 /projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod(21): Reading nostruct-align/1fjkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-27738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod (nostruct-align/1fjkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.632837 /projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod(22): Reading nostruct-align/1jk3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod (nostruct-align/1jk3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.359888 /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod(22): Reading nostruct-align/1bxm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod (nostruct-align/1bxm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.640884 /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod(22): Reading nostruct-align/1c4eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30548/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod (nostruct-align/1c4eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.506886 /projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod(21): Reading nostruct-align/1euoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod (nostruct-align/1euoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.822830 /projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod(22): Reading nostruct-align/1jae.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-3179/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod (nostruct-align/1jae.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.874855 /projects/compbio/experiments/models.97/pdb/1k/1k47A/nostruct-align/1k47A.t2k-w0.5.mod(22): Reading nostruct-align/1k47A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k47A/nostruct-align/1k47A.t2k-w0.5.mod (nostruct-align/1k47A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k47A/nostruct-align/1k47A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.248880 /projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod(21): Reading nostruct-align/1hbwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-27156/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod (nostruct-align/1hbwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.295881 /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod(21): Reading nostruct-align/2fgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-2398/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod (nostruct-align/2fgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.371866 /projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod(21): Reading nostruct-align/1ea1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod (nostruct-align/1ea1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.859840 /projects/compbio/experiments/models.97/pdb/1k/1kmdA/nostruct-align/1kmdA.t2k-w0.5.mod(22): Reading nostruct-align/1kmdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-18920/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmdA/nostruct-align/1kmdA.t2k-w0.5.mod (nostruct-align/1kmdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kmdA/nostruct-align/1kmdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.400856 /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod(21): Reading nostruct-align/1dl5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod (nostruct-align/1dl5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.462862 /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod(21): Reading nostruct-align/1byuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod (nostruct-align/1byuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.115841 /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod(21): Reading nostruct-align/1d7uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-8943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod (nostruct-align/1d7uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.995874 /projects/compbio/experiments/models.97/pdb/1j/1jxhA/nostruct-align/1jxhA.t2k-w0.5.mod(22): Reading nostruct-align/1jxhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29472/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jxhA/nostruct-align/1jxhA.t2k-w0.5.mod (nostruct-align/1jxhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jxhA/nostruct-align/1jxhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.509846 /projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod(22): Reading nostruct-align/3xis.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10253/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod (nostruct-align/3xis.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.171869 /projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod(22): Reading nostruct-align/1i3dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod (nostruct-align/1i3dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.465887 /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod(21): Reading nostruct-align/1rhi3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod (nostruct-align/1rhi3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.385857 /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod(22): Reading nostruct-align/1b25A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod (nostruct-align/1b25A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.441849 /projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod(21): Reading nostruct-align/1fcbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod (nostruct-align/1fcbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.503834 /projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod(21): Reading nostruct-align/4aahA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-22793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod (nostruct-align/4aahA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.720882 /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod(22): Reading nostruct-align/1qf8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod (nostruct-align/1qf8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.269871 /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod(22): Reading nostruct-align/1byb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod (nostruct-align/1byb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.412834 /projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod(21): Reading nostruct-align/4aahB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-18295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod (nostruct-align/4aahB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.397833 /projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod(22): Reading nostruct-align/1k2yX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-18297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod (nostruct-align/1k2yX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.780840 /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod(21): Reading nostruct-align/1enfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod (nostruct-align/1enfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.952862 /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod(22): Reading nostruct-align/1byi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13198/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod (nostruct-align/1byi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.719831 /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod(21): Reading nostruct-align/1fjlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod (nostruct-align/1fjlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.155863 /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod(21): Reading nostruct-align/1cghA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod (nostruct-align/1cghA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.773838 /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod(21): Reading nostruct-align/2fha.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2722/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod (nostruct-align/2fha.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.029873 /projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod(21): Reading nostruct-align/1eupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod (nostruct-align/1eupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.223879 /projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod(21): Reading nostruct-align/1dcnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2984/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod (nostruct-align/1dcnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.831869 /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod(21): Reading nostruct-align/1brlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod (nostruct-align/1brlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.745888 /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod(21): Reading nostruct-align/1brlB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod (nostruct-align/1brlB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.933830 /projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod(21): Reading nostruct-align/1fqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod (nostruct-align/1fqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -31.515846 /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod(21): Reading nostruct-align/1qsmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-4406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod (nostruct-align/1qsmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.178856 /projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod(21): Reading nostruct-align/1dcnD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod (nostruct-align/1dcnD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.840851 /projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod(22): Reading nostruct-align/1ea2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod (nostruct-align/1ea2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.895832 /projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod(21): Reading nostruct-align/1fqvD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-23164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod (nostruct-align/1fqvD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.444860 /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod(21): Reading nostruct-align/2gsaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-20439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod (nostruct-align/2gsaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.306864 /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod(21): Reading nostruct-align/2mrb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-25891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod (nostruct-align/2mrb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.358858 /projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod(22): Reading nostruct-align/1djxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod (nostruct-align/1djxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.250870 /projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod(21): Reading nostruct-align/1dl6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod (nostruct-align/1dl6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.881866 /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod(21): Reading nostruct-align/1djxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod (nostruct-align/1djxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.832863 /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod(21): Reading nostruct-align/1qli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19258/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod (nostruct-align/1qli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.610861 /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod(21): Reading nostruct-align/1skyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-10749/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod (nostruct-align/1skyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.322830 /projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod(21): Reading nostruct-align/1fqvJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod (nostruct-align/1fqvJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.456842 /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod(21): Reading nostruct-align/2tmdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26677/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod (nostruct-align/2tmdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.056885 /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod(21): Reading nostruct-align/1skyE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-15185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod (nostruct-align/1skyE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.033834 /projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod(22): Reading nostruct-align/1b0xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod (nostruct-align/1b0xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.436869 /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod(21): Reading nostruct-align/1qf9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4798/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod (nostruct-align/1qf9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.182848 /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod(21): Reading nostruct-align/1bza.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3160/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod (nostruct-align/1bza.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.424856 /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod(22): Reading nostruct-align/1draA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod (nostruct-align/1draA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.438841 /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod(22): Reading nostruct-align/1hqkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod (nostruct-align/1hqkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.376865 /projects/compbio/experiments/models.97/pdb/1l/1lpuA/nostruct-align/1lpuA.t2k-w0.5.mod(22): Reading nostruct-align/1lpuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lpuA/nostruct-align/1lpuA.t2k-w0.5.mod (nostruct-align/1lpuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lpuA/nostruct-align/1lpuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.744865 /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod(21): Reading nostruct-align/1bzg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod (nostruct-align/1bzg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.999846 /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod(22): Reading nostruct-align/1bkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod (nostruct-align/1bkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.084846 /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod(21): Reading nostruct-align/1qldA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22935/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod (nostruct-align/1qldA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.032862 /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod(22): Reading nostruct-align/1b8aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod (nostruct-align/1b8aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.321852 /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod(21): Reading nostruct-align/1fjmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-6275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod (nostruct-align/1fjmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.374842 /projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod(21): Reading nostruct-align/1dykA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod (nostruct-align/1dykA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.963854 /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod(22): Reading nostruct-align/1bkcE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod (nostruct-align/1bkcE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.171839 /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod(22): Reading nostruct-align/1j83A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6552/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod (nostruct-align/1j83A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.848866 /projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod(21): Reading nostruct-align/1gfsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-17775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod (nostruct-align/1gfsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.649881 /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod(21): Reading nostruct-align/2rmpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod (nostruct-align/2rmpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.174833 /projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod(22): Reading nostruct-align/1g3qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5400/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod (nostruct-align/1g3qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.886845 /projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod(22): Reading nostruct-align/1dcoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-625/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod (nostruct-align/1dcoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.103872 /projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod(22): Reading nostruct-align/1hbyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod (nostruct-align/1hbyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.119858 /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod(22): Reading nostruct-align/1brmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod (nostruct-align/1brmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.116854 /projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod(21): Reading nostruct-align/1hd7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod (nostruct-align/1hd7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.085848 /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod(21): Reading nostruct-align/2sivA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod (nostruct-align/2sivA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.066853 /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod(22): Reading nostruct-align/1fs5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27023/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod (nostruct-align/1fs5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.143883 /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod(21): Reading nostruct-align/2sivB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod (nostruct-align/2sivB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.015879 /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod(22): Reading nostruct-align/1jiwI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod (nostruct-align/1jiwI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.840878 /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod(22): Reading nostruct-align/1avgI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-11748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod (nostruct-align/1avgI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.518881 /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod(21): Reading nostruct-align/1cnsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-11463/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod (nostruct-align/1cnsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.078863 /projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod(21): Reading nostruct-align/3mhtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-2613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod (nostruct-align/3mhtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.303885 /projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod(22): Reading nostruct-align/1jiwP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod (nostruct-align/1jiwP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.119835 /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod(22): Reading nostruct-align/1bywA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod (nostruct-align/1bywA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.594862 /projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod(21): Reading nostruct-align/1hjbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod (nostruct-align/1hjbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.314861 /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod(21): Reading nostruct-align/1a4sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-10083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod (nostruct-align/1a4sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.653860 /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod(21): Reading nostruct-align/1jcv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod (nostruct-align/1jcv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.862862 /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod(21): Reading nostruct-align/1be9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod (nostruct-align/1be9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.448839 /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod(22): Reading nostruct-align/1b0yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29343/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod (nostruct-align/1b0yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.110868 /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod(22): Reading nostruct-align/1fcdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod (nostruct-align/1fcdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.653830 /projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod(22): Reading nostruct-align/1ktpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23515/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod (nostruct-align/1ktpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.816847 /projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod(22): Reading nostruct-align/1ktpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod (nostruct-align/1ktpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.866840 /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod(21): Reading nostruct-align/1fcdC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-6084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod (nostruct-align/1fcdC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.471848 /projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod(22): Reading nostruct-align/1cnt1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32047/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod (nostruct-align/1cnt1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.733881 /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod(22): Reading nostruct-align/1xwl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod (nostruct-align/1xwl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.642841 /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod(21): Reading nostruct-align/1cnt2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod (nostruct-align/1cnt2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.089857 /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod(22): Reading nostruct-align/2occA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10964/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod (nostruct-align/2occA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.916851 /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod(21): Reading nostruct-align/1cnt3.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod (nostruct-align/1cnt3.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.724878 /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod(21): Reading nostruct-align/2occB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16601/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod (nostruct-align/2occB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.085852 /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod(21): Reading nostruct-align/5hpgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod (nostruct-align/5hpgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.357838 /projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod(22): Reading nostruct-align/2occC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod (nostruct-align/2occC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.286879 /projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod(21): Reading nostruct-align/1fjnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-27902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod (nostruct-align/1fjnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.098843 /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod(22): Reading nostruct-align/2occD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod (nostruct-align/2occD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.090866 /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod(22): Reading nostruct-align/1f7lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod (nostruct-align/1f7lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.318848 /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod(22): Reading nostruct-align/1jixA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16440/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod (nostruct-align/1jixA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.795879 /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod(22): Reading nostruct-align/2occE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15400/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod (nostruct-align/2occE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.531860 /projects/compbio/experiments/models.97/pdb/1h/1hxvA/nostruct-align/1hxvA.t2k-w0.5.mod(22): Reading nostruct-align/1hxvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-11747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxvA/nostruct-align/1hxvA.t2k-w0.5.mod (nostruct-align/1hxvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxvA/nostruct-align/1hxvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.689869 /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod(22): Reading nostruct-align/2occF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1342/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod (nostruct-align/2occF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.671885 /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod(22): Reading nostruct-align/1qleD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod (nostruct-align/1qleD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.416878 /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod(22): Reading nostruct-align/1hz4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod (nostruct-align/1hz4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.352886 /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod(21): Reading nostruct-align/1jdc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-21739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod (nostruct-align/1jdc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.502844 /projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod(22): Reading nostruct-align/1gh2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod (nostruct-align/1gh2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.247873 /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod(22): Reading nostruct-align/2occG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod (nostruct-align/2occG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.556866 /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod(22): Reading nostruct-align/2occH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1673/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod (nostruct-align/2occH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.786879 /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod(22): Reading nostruct-align/1ew0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod (nostruct-align/1ew0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.526848 /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod(22): Reading nostruct-align/2occI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod (nostruct-align/2occI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.224840 /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod(21): Reading nostruct-align/2ezxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5064/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod (nostruct-align/2ezxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516844 /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod(22): Reading nostruct-align/2occJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod (nostruct-align/2occJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.636883 /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod(21): Reading nostruct-align/1dcpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod (nostruct-align/1dcpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.035864 /projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod(22): Reading nostruct-align/1hd8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod (nostruct-align/1hd8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.691881 /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod(22): Reading nostruct-align/2occK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod (nostruct-align/2occK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.825884 /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod(21): Reading nostruct-align/1d0nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod (nostruct-align/1d0nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.519831 /projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod(22): Reading nostruct-align/1hbzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod (nostruct-align/1hbzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.040876 /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod(22): Reading nostruct-align/2occL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod (nostruct-align/2occL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.437845 /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod(22): Reading nostruct-align/2occM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10014/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod (nostruct-align/2occM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.420864 /projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod(21): Reading nostruct-align/1jqaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod (nostruct-align/1jqaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.673845 /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod(21): Reading nostruct-align/1pamA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod (nostruct-align/1pamA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.180830 /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod(22): Reading nostruct-align/1cp2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod (nostruct-align/1cp2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.478884 /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod(22): Reading nostruct-align/1qnf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4283/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod (nostruct-align/1qnf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.307861 /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod(22): Reading nostruct-align/1bkdS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod (nostruct-align/1bkdS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.921835 /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod(21): Reading nostruct-align/1brnL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-21387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod (nostruct-align/1brnL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.963840 /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod(21): Reading nostruct-align/7icd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-5341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod (nostruct-align/7icd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.153881 /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod(22): Reading nostruct-align/1jdw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-31028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod (nostruct-align/1jdw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.492830 /projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod(21): Reading nostruct-align/1f0cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-30363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod (nostruct-align/1f0cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.654861 /projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod(21): Reading nostruct-align/9pap.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod (nostruct-align/9pap.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.164881 /projects/compbio/experiments/models.97/pdb/1l/1lr5A/nostruct-align/1lr5A.t2k-w0.5.mod(22): Reading nostruct-align/1lr5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-1290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lr5A/nostruct-align/1lr5A.t2k-w0.5.mod (nostruct-align/1lr5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lr5A/nostruct-align/1lr5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.413860 /projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod(21): Reading nostruct-align/1io1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod (nostruct-align/1io1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.914841 /projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod(22): Reading nostruct-align/1dymA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-16781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod (nostruct-align/1dymA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.725878 /projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod(22): Reading nostruct-align/1jk7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod (nostruct-align/1jk7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.216877 /projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod(22): Reading nostruct-align/1j6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod (nostruct-align/1j6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.834858 /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod(22): Reading nostruct-align/1dcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod (nostruct-align/1dcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.104887 /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod(21): Reading nostruct-align/1broA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod (nostruct-align/1broA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.359854 /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod(21): Reading nostruct-align/1qspA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3036/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod (nostruct-align/1qspA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.322863 /projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod(21): Reading nostruct-align/1fqyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-30748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod (nostruct-align/1fqyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.641874 /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod(22): Reading nostruct-align/1fs7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20246/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod (nostruct-align/1fs7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.042866 /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod(21): Reading nostruct-align/1ea5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2550/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod (nostruct-align/1ea5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.740833 /projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod(21): Reading nostruct-align/1cnuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23678/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod (nostruct-align/1cnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.519861 /projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod(21): Reading nostruct-align/1cp3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod (nostruct-align/1cp3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.221840 /projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod(22): Reading nostruct-align/1jem.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod (nostruct-align/1jem.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.851877 /projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod(21): Reading nostruct-align/1byyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13167/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod (nostruct-align/1byyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.434860 /projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod(21): Reading nostruct-align/1d7yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-5834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod (nostruct-align/1d7yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.545856 /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod(22): Reading nostruct-align/1jer.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod (nostruct-align/1jer.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.107843 /projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod(21): Reading nostruct-align/1fybA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod (nostruct-align/1fybA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.403870 /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod(21): Reading nostruct-align/1a4uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod (nostruct-align/1a4uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.805878 /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k-w0.5.mod(22): Reading nostruct-align/1m40A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k-w0.5.mod (nostruct-align/1m40A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.487864 /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod(22): Reading nostruct-align/1ycqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3102/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod (nostruct-align/1ycqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.968887 /projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod(21): Reading nostruct-align/1io2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod (nostruct-align/1io2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.490850 /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod(21): Reading nostruct-align/1xyn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3560/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod (nostruct-align/1xyn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.735840 /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod(21): Reading nostruct-align/1qlgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod (nostruct-align/1qlgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.190834 /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod(22): Reading nostruct-align/1b8dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14095/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod (nostruct-align/1b8dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.135836 /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod(21): Reading nostruct-align/1dynA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28286/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod (nostruct-align/1dynA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.297838 /projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod(22): Reading nostruct-align/1hxxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod (nostruct-align/1hxxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.849831 /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod(22): Reading nostruct-align/1hz6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod (nostruct-align/1hz6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.461861 /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod(22): Reading nostruct-align/119l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod (nostruct-align/119l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.359835 /projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod(21): Reading nostruct-align/1ew2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod (nostruct-align/1ew2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.110874 /projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod(21): Reading nostruct-align/3hmgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod (nostruct-align/3hmgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.375881 /projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod(21): Reading nostruct-align/3hmgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30166/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod (nostruct-align/3hmgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.734835 /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod(22): Reading nostruct-align/1lbeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod (nostruct-align/1lbeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.111883 /projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod(22): Reading nostruct-align/1jqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod (nostruct-align/1jqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.105881 /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k-w0.5.mod(22): Reading nostruct-align/1h7cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k-w0.5.mod (nostruct-align/1h7cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.399879 /projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod(21): Reading nostruct-align/1a64A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod (nostruct-align/1a64A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.536884 /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod(22): Reading nostruct-align/1egaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod (nostruct-align/1egaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.837862 /projects/compbio/experiments/models.97/pdb/1j/1jxmA/nostruct-align/1jxmA.t2k-w0.5.mod(22): Reading nostruct-align/1jxmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jxmA/nostruct-align/1jxmA.t2k-w0.5.mod (nostruct-align/1jxmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jxmA/nostruct-align/1jxmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.118855 /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod(21): Reading nostruct-align/2fn2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16689/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod (nostruct-align/2fn2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.438858 /projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod(22): Reading nostruct-align/1hqoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod (nostruct-align/1hqoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.764841 /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod(22): Reading nostruct-align/1s01.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-2155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod (nostruct-align/1s01.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.638828 /projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod(21): Reading nostruct-align/1imuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-8056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod (nostruct-align/1imuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.454844 /projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod(22): Reading nostruct-align/1dyoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod (nostruct-align/1dyoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.842873 /projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod(22): Reading nostruct-align/1c4kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod (nostruct-align/1c4kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.682859 /projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod(22): Reading nostruct-align/1g3uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod (nostruct-align/1g3uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.201843 /projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod(21): Reading nostruct-align/1ew3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-25263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod (nostruct-align/1ew3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.724857 /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod(22): Reading nostruct-align/1tx4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod (nostruct-align/1tx4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.504864 /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod(21): Reading nostruct-align/1ppbL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod (nostruct-align/1ppbL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.040833 /projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod(22): Reading nostruct-align/1tx4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14562/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod (nostruct-align/1tx4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.482870 /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod(22): Reading nostruct-align/1d0qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2146/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod (nostruct-align/1d0qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.327829 /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod(21): Reading nostruct-align/1qu0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-16928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod (nostruct-align/1qu0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.420860 /projects/compbio/experiments/models.97/pdb/1e/1ea7A/nostruct-align/1ea7A.t2k-w0.5.mod(22): Reading nostruct-align/1ea7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23694/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea7A/nostruct-align/1ea7A.t2k-w0.5.mod (nostruct-align/1ea7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ea7A/nostruct-align/1ea7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.975874 /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod(22): Reading nostruct-align/2sqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod (nostruct-align/2sqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.287872 /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod(21): Reading nostruct-align/1ai7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod (nostruct-align/1ai7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.531836 /projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod(21): Reading nostruct-align/1h7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod (nostruct-align/1h7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.726889 /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod(21): Reading nostruct-align/1a65A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-31768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod (nostruct-align/1a65A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.010839 /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod(21): Reading nostruct-align/2fmr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod (nostruct-align/2fmr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.809830 /projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod(22): Reading nostruct-align/1i3jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod (nostruct-align/1i3jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.194838 /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod(21): Reading nostruct-align/2bidA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod (nostruct-align/2bidA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.073837 /projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod(21): Reading nostruct-align/1fchA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod (nostruct-align/1fchA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.682840 /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod(22): Reading nostruct-align/1jd0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-21085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod (nostruct-align/1jd0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.050840 /projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod(21): Reading nostruct-align/1ycsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod (nostruct-align/1ycsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.271873 /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod(21): Reading nostruct-align/1ycsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod (nostruct-align/1ycsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.805870 /projects/compbio/experiments/models.97/pdb/1i/1imvA/nostruct-align/1imvA.t2k-w0.5.mod(22): Reading nostruct-align/1imvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imvA/nostruct-align/1imvA.t2k-w0.5.mod (nostruct-align/1imvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1imvA/nostruct-align/1imvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.863842 /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod(21): Reading nostruct-align/1udiI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32195/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod (nostruct-align/1udiI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.089886 /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod(22): Reading nostruct-align/1b8fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-32503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod (nostruct-align/1b8fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.851873 /projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod(22): Reading nostruct-align/1fjrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21061/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod (nostruct-align/1fjrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.533875 /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod(22): Reading nostruct-align/1fl0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod (nostruct-align/1fl0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.060873 /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod(22): Reading nostruct-align/1dypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod (nostruct-align/1dypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.362852 /projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod(22): Reading nostruct-align/1j6zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod (nostruct-align/1j6zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.275858 /projects/compbio/experiments/models.97/pdb/1g/1gh6A/nostruct-align/1gh6A.t2k-w0.5.mod(22): Reading nostruct-align/1gh6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8576/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh6A/nostruct-align/1gh6A.t2k-w0.5.mod (nostruct-align/1gh6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gh6A/nostruct-align/1gh6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.928833 /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod(22): Reading nostruct-align/1rhoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-32071/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod (nostruct-align/1rhoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.372845 /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod(22): Reading nostruct-align/1rhoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod (nostruct-align/1rhoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.306849 /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod(22): Reading nostruct-align/1euvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7980/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod (nostruct-align/1euvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.389833 /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod(22): Reading nostruct-align/1ew4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod (nostruct-align/1ew4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.874874 /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod(21): Reading nostruct-align/1dctA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod (nostruct-align/1dctA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.772881 /projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod(22): Reading nostruct-align/1euvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod (nostruct-align/1euvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.773842 /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod(21): Reading nostruct-align/1bt0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5873/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod (nostruct-align/1bt0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.386887 /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod(21): Reading nostruct-align/1qu1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28116/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod (nostruct-align/1qu1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.334841 /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod(22): Reading nostruct-align/1npoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod (nostruct-align/1npoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.995880 /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod(21): Reading nostruct-align/1npoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10675/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod (nostruct-align/1npoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.975880 /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod(22): Reading nostruct-align/1fyeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod (nostruct-align/1fyeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.614878 /projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod(22): Reading nostruct-align/1h7eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod (nostruct-align/1h7eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.831877 /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod(22): Reading nostruct-align/3htsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1790/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod (nostruct-align/3htsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.484880 /projects/compbio/experiments/models.97/pdb/1i/1i3kA/nostruct-align/1i3kA.t2k-w0.5.mod(22): Reading nostruct-align/1i3kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3kA/nostruct-align/1i3kA.t2k-w0.5.mod (nostruct-align/1i3kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i3kA/nostruct-align/1i3kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.742876 /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod(21): Reading nostruct-align/8kme2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19745/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod (nostruct-align/8kme2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.284855 /projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod(22): Reading nostruct-align/1jd1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod (nostruct-align/1jd1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.926865 /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod(22): Reading nostruct-align/1aocA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod (nostruct-align/1aocA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.424883 /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod(21): Reading nostruct-align/1b8gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-32374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod (nostruct-align/1b8gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.901836 /projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod(21): Reading nostruct-align/1fjsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod (nostruct-align/1fjsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.999842 /projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod(21): Reading nostruct-align/1fl1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod (nostruct-align/1fl1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.446850 /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod(21): Reading nostruct-align/1dyqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod (nostruct-align/1dyqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.951849 /projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod(21): Reading nostruct-align/1jic.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod (nostruct-align/1jic.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.298887 /projects/compbio/experiments/models.97/pdb/1g/1gh7A/nostruct-align/1gh7A.t2k-w0.5.mod(22): Reading nostruct-align/1gh7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh7A/nostruct-align/1gh7A.t2k-w0.5.mod (nostruct-align/1gh7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gh7A/nostruct-align/1gh7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.479847 /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod(21): Reading nostruct-align/1avmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-19626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod (nostruct-align/1avmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.757872 /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod(22): Reading nostruct-align/1euwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16448/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod (nostruct-align/1euwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.493885 /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod(22): Reading nostruct-align/1g55A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod (nostruct-align/1g55A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.984838 /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod(22): Reading nostruct-align/1tvxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3133/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod (nostruct-align/1tvxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.739859 /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod(21): Reading nostruct-align/1tvxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3506/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod (nostruct-align/1tvxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.808838 /projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod(21): Reading nostruct-align/1d0sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod (nostruct-align/1d0sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.063860 /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod(22): Reading nostruct-align/1xvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod (nostruct-align/1xvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.436853 /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod(21): Reading nostruct-align/1qu2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod (nostruct-align/1qu2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.720877 /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod(22): Reading nostruct-align/1qstA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21141/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod (nostruct-align/1qstA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.376860 /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod(21): Reading nostruct-align/1ca1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-15470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod (nostruct-align/1ca1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.586851 /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod(21): Reading nostruct-align/1brsD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod (nostruct-align/1brsD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.590872 /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod(21): Reading nostruct-align/1parA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod (nostruct-align/1parA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.306835 /projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod(22): Reading nostruct-align/1fjsL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7393/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod (nostruct-align/1fjsL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.853834 /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod(21): Reading nostruct-align/1yrgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod (nostruct-align/1yrgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.346886 /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod(21): Reading nostruct-align/1yrgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod (nostruct-align/1yrgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.085850 /projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod(21): Reading nostruct-align/9atcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod (nostruct-align/9atcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.376858 /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k-w0.5.mod(22): Reading nostruct-align/1l6pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30575/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k-w0.5.mod (nostruct-align/1l6pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.455847 /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod(22): Reading nostruct-align/1a4yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod (nostruct-align/1a4yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.202827 /projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod(21): Reading nostruct-align/1egdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod (nostruct-align/1egdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.300837 /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod(21): Reading nostruct-align/1jxpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-18943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod (nostruct-align/1jxpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.812874 /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod(21): Reading nostruct-align/2tmkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14493/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod (nostruct-align/2tmkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.271843 /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod(21): Reading nostruct-align/1theA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-17567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod (nostruct-align/1theA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.767828 /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod(21): Reading nostruct-align/1a4yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-12900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod (nostruct-align/1a4yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.742857 /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod(21): Reading nostruct-align/1theB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod (nostruct-align/1theB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.799875 /projects/compbio/experiments/models.97/pdb/1k/1kv4A/nostruct-align/1kv4A.t2k-w0.5.mod(22): Reading nostruct-align/1kv4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv4A/nostruct-align/1kv4A.t2k-w0.5.mod (nostruct-align/1kv4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kv4A/nostruct-align/1kv4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.480839 /projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod(21): Reading nostruct-align/1fcjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod (nostruct-align/1fcjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.111845 /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod(21): Reading nostruct-align/2fow.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod (nostruct-align/2fow.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.867846 /projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod(21): Reading nostruct-align/2fox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2887/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod (nostruct-align/2fox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.262827 /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod(21): Reading nostruct-align/2myo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod (nostruct-align/2myo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.135836 /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod(21): Reading nostruct-align/2atjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod (nostruct-align/2atjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.908831 /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod(21): Reading nostruct-align/1bkjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod (nostruct-align/1bkjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.642849 /projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod(21): Reading nostruct-align/1fl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-536/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod (nostruct-align/1fl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.964880 /projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod(21): Reading nostruct-align/1gh8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod (nostruct-align/1gh8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.647842 /projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod(21): Reading nostruct-align/1ppeI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-29211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod (nostruct-align/1ppeI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.333879 /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod(22): Reading nostruct-align/1ew6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod (nostruct-align/1ew6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.492872 /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod(22): Reading nostruct-align/1iuaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod (nostruct-align/1iuaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.035847 /projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod(21): Reading nostruct-align/1ew6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-32551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod (nostruct-align/1ew6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.492872 /projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod(21): Reading nostruct-align/2izgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod (nostruct-align/2izgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.442833 /projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod(22): Reading nostruct-align/1qsuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod (nostruct-align/1qsuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.879871 /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod(21): Reading nostruct-align/1cnzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22255/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod (nostruct-align/1cnzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072853 /projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod(22): Reading nostruct-align/1kmmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6256/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod (nostruct-align/1kmmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.076866 /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod(21): Reading nostruct-align/1gumA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod (nostruct-align/1gumA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.951870 /projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod(22): Reading nostruct-align/1meyC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod (nostruct-align/1meyC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod . Average NLL-Simple NULL score: -31.715883 /projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod(22): Reading nostruct-align/1kv5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod (nostruct-align/1kv5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.881845 /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod(22): Reading nostruct-align/1thfD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9136/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod (nostruct-align/1thfD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.438885 /projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod(22): Reading nostruct-align/1f0iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod (nostruct-align/1f0iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.171841 /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod(22): Reading nostruct-align/1hqsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod (nostruct-align/1hqsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.151834 /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod(21): Reading nostruct-align/1aoeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod (nostruct-align/1aoeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.435833 /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod(21): Reading nostruct-align/1io7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-8584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod (nostruct-align/1io7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.546829 /projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod(22): Reading nostruct-align/1jbuH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod (nostruct-align/1jbuH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.071852 /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod(21): Reading nostruct-align/1caj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-8717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod (nostruct-align/1caj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.410833 /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod(21): Reading nostruct-align/1ppfE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod (nostruct-align/1ppfE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.611849 /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod(22): Reading nostruct-align/1dysA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod (nostruct-align/1dysA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.779858 /projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod(22): Reading nostruct-align/1f7sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31282/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod (nostruct-align/1f7sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.057859 /projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod(22): Reading nostruct-align/1jbuL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod (nostruct-align/1jbuL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.943859 /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod(22): Reading nostruct-align/1e4cP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod (nostruct-align/1e4cP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.141878 /projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod(22): Reading nostruct-align/1c4oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25531/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod (nostruct-align/1c4oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.042833 /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod(22): Reading nostruct-align/1avoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-10885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod (nostruct-align/1avoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.895885 /projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod(21): Reading nostruct-align/1gh9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-452/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod (nostruct-align/1gh9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.892834 /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod(22): Reading nostruct-align/1avoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod (nostruct-align/1avoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.547869 /projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod(22): Reading nostruct-align/1g57A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod (nostruct-align/1g57A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.193884 /projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod(22): Reading nostruct-align/1k3bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod (nostruct-align/1k3bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.239868 /projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod(21): Reading nostruct-align/1de5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod (nostruct-align/1de5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.140871 /projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod(22): Reading nostruct-align/1k3bB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod (nostruct-align/1k3bB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.701841 /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod(21): Reading nostruct-align/2izhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod (nostruct-align/2izhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.625843 /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod(21): Reading nostruct-align/1bt3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod (nostruct-align/1bt3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.269846 /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod(21): Reading nostruct-align/1que.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod (nostruct-align/1que.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.254848 /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod(22): Reading nostruct-align/1cc5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod (nostruct-align/1cc5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.089834 /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod(21): Reading nostruct-align/2ucz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod (nostruct-align/2ucz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.828840 /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod(21): Reading nostruct-align/1slaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod (nostruct-align/1slaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.129881 /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod(22): Reading nostruct-align/1kmnD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-22039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod (nostruct-align/1kmnD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.322842 /projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod(22): Reading nostruct-align/1fyhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod (nostruct-align/1fyhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.419886 /projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod(21): Reading nostruct-align/1fyhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14552/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod (nostruct-align/1fyhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.363878 /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod(21): Reading nostruct-align/1jkw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22666/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod (nostruct-align/1jkw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.287888 /projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod(22): Reading nostruct-align/1f0jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod (nostruct-align/1f0jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.170843 /projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod(21): Reading nostruct-align/1ga0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod (nostruct-align/1ga0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.950857 /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod(22): Reading nostruct-align/1cbf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2599/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod (nostruct-align/1cbf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.419876 /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod(21): Reading nostruct-align/1cbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-31753/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod (nostruct-align/1cbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.894878 /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod(21): Reading nostruct-align/1cbh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod (nostruct-align/1cbh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.796875 /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod(22): Reading nostruct-align/1qlmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod (nostruct-align/1qlmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.752876 /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod(22): Reading nostruct-align/1b8jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20562/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod (nostruct-align/1b8jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.683868 /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod(21): Reading nostruct-align/1dytA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17587/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod (nostruct-align/1dytA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.542828 /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod(21): Reading nostruct-align/1ci0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-32668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod (nostruct-align/1ci0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.538857 /projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod(21): Reading nostruct-align/7pti.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-2060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod (nostruct-align/7pti.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.137829 /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod(22): Reading nostruct-align/1avpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9854/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod (nostruct-align/1avpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.921877 /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod(21): Reading nostruct-align/1cbn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-12473/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod (nostruct-align/1cbn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.883888 /projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod(21): Reading nostruct-align/1de6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11172/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod (nostruct-align/1de6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.144829 /projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod(21): Reading nostruct-align/1bt4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-25933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod (nostruct-align/1bt4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.747833 /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod(21): Reading nostruct-align/1d0vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod (nostruct-align/1d0vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.778854 /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod(21): Reading nostruct-align/1jli.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19528/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod (nostruct-align/1jli.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.582840 /projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod(21): Reading nostruct-align/2mysB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12944/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod (nostruct-align/2mysB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.860836 /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod(21): Reading nostruct-align/1qu5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod (nostruct-align/1qu5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.541864 /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod(21): Reading nostruct-align/1cbs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod (nostruct-align/1cbs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.774849 /projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod(22): Reading nostruct-align/1jqiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-1864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod (nostruct-align/1jqiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.065865 /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod(21): Reading nostruct-align/1pauA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31084/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod (nostruct-align/1pauA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.883877 /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod(21): Reading nostruct-align/1pauB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-24159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod (nostruct-align/1pauB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.927853 /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod(22): Reading nostruct-align/1npsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod (nostruct-align/1npsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.677841 /projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod(22): Reading nostruct-align/1kmoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod (nostruct-align/1kmoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.402853 /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod(22): Reading nostruct-align/1cby.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod (nostruct-align/1cby.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.991879 /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod(21): Reading nostruct-align/1cd8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod (nostruct-align/1cd8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.647877 /projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod(22): Reading nostruct-align/1l6sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod (nostruct-align/1l6sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.454847 /projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod(21): Reading nostruct-align/1eggA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10816/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod (nostruct-align/1eggA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.023844 /projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod(22): Reading nostruct-align/1ifqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod (nostruct-align/1ifqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.193865 /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod(22): Reading nostruct-align/1kv7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-16299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod (nostruct-align/1kv7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.819862 /projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod(21): Reading nostruct-align/1f0kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-11497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod (nostruct-align/1f0kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.501863 /projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod(22): Reading nostruct-align/1jbwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod (nostruct-align/1jbwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.812841 /projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod(22): Reading nostruct-align/1jd5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod (nostruct-align/1jd5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.182882 /projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod(21): Reading nostruct-align/2tmnE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod (nostruct-align/2tmnE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.969843 /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod(22): Reading nostruct-align/4fgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod (nostruct-align/4fgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.406837 /projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod(21): Reading nostruct-align/1aogA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-30570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod (nostruct-align/1aogA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.268873 /projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod(21): Reading nostruct-align/1ga1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-18147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod (nostruct-align/1ga1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.874840 /projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod(21): Reading nostruct-align/1ccg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod (nostruct-align/1ccg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.732834 /projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod(22): Reading nostruct-align/1qlnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod (nostruct-align/1qlnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.139858 /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod(22): Reading nostruct-align/1b8kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod (nostruct-align/1b8kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.200872 /projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod(22): Reading nostruct-align/1f93A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod (nostruct-align/1f93A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.061850 /projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod(21): Reading nostruct-align/1f7uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod (nostruct-align/1f7uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.624863 /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod(22): Reading nostruct-align/1c4qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod (nostruct-align/1c4qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.964832 /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod(22): Reading nostruct-align/1avqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod (nostruct-align/1avqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.102833 /projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod(21): Reading nostruct-align/1f93E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod (nostruct-align/1f93E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.107885 /projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod(22): Reading nostruct-align/1g59A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod (nostruct-align/1g59A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.085867 /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod(22): Reading nostruct-align/1brwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod (nostruct-align/1brwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.973854 /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod(21): Reading nostruct-align/1ccr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-22488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod (nostruct-align/1ccr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.313839 /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod(22): Reading nostruct-align/1wdcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod (nostruct-align/1wdcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.691832 /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod(21): Reading nostruct-align/1qu6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-1340/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod (nostruct-align/1qu6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.394880 /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod(21): Reading nostruct-align/1wdcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod (nostruct-align/1wdcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.170847 /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod(21): Reading nostruct-align/1mtnC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod (nostruct-align/1mtnC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.868830 /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod(21): Reading nostruct-align/1wdcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod (nostruct-align/1wdcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.759861 /projects/compbio/experiments/models.97/pdb/1j/1jqjC/nostruct-align/1jqjC.t2k-w0.5.mod(22): Reading nostruct-align/1jqjC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqjC/nostruct-align/1jqjC.t2k-w0.5.mod (nostruct-align/1jqjC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqjC/nostruct-align/1jqjC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.199883 /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod(21): Reading nostruct-align/2fsp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-13728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod (nostruct-align/2fsp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.215858 /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k-w0.5.mod(22): Reading nostruct-align/1ifrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k-w0.5.mod (nostruct-align/1ifrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.130856 /projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod(21): Reading nostruct-align/1gupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod (nostruct-align/1gupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.809830 /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod(21): Reading nostruct-align/1xgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod (nostruct-align/1xgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.031879 /projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod(22): Reading nostruct-align/1kv8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6353/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod (nostruct-align/1kv8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.448879 /projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod(22): Reading nostruct-align/1ktzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod (nostruct-align/1ktzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.365877 /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod(21): Reading nostruct-align/1f0lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod (nostruct-align/1f0lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.583881 /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod(21): Reading nostruct-align/1otcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-15731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod (nostruct-align/1otcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.362886 /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod(21): Reading nostruct-align/1otcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod (nostruct-align/1otcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.748861 /projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod(21): Reading nostruct-align/1hqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod (nostruct-align/1hqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.010857 /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod(21): Reading nostruct-align/1nbaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-12746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod (nostruct-align/1nbaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.478876 /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod(22): Reading nostruct-align/1aohA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-14787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod (nostruct-align/1aohA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.063866 /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod(21): Reading nostruct-align/1aohB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-30728/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod (nostruct-align/1aohB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.020876 /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod(22): Reading nostruct-align/1ep0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod (nostruct-align/1ep0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.622841 /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod(21): Reading nostruct-align/1qloA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-18776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod (nostruct-align/1qloA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.081831 /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod(21): Reading nostruct-align/1cdi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-13780/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod (nostruct-align/1cdi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.728882 /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod(22): Reading nostruct-align/1f94A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod (nostruct-align/1f94A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.403837 /projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod(22): Reading nostruct-align/1c4rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod (nostruct-align/1c4rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.563869 /projects/compbio/experiments/models.97/pdb/1k/1k3eA/nostruct-align/1k3eA.t2k-w0.5.mod(22): Reading nostruct-align/1k3eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9814/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3eA/nostruct-align/1k3eA.t2k-w0.5.mod (nostruct-align/1k3eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3eA/nostruct-align/1k3eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.486883 /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod(21): Reading nostruct-align/1cdp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod (nostruct-align/1cdp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.507868 /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod(21): Reading nostruct-align/1cdq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25655/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod (nostruct-align/1cdq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.582865 /projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod(22): Reading nostruct-align/1e4fT.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod (nostruct-align/1e4fT.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.892887 /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod(21): Reading nostruct-align/2lgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod (nostruct-align/2lgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.994886 /projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod(22): Reading nostruct-align/1qu7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21042/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod (nostruct-align/1qu7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.562855 /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod(21): Reading nostruct-align/1cds.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod (nostruct-align/1cds.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.582865 /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod(21): Reading nostruct-align/4blmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-9587/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod (nostruct-align/4blmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.865856 /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod(22): Reading nostruct-align/1cdy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod (nostruct-align/1cdy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.719856 /projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod(21): Reading nostruct-align/1dkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-16409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod (nostruct-align/1dkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.754841 /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod(22): Reading nostruct-align/4mt2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod (nostruct-align/4mt2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.995880 /projects/compbio/experiments/models.97/pdb/1l/1lk5A/nostruct-align/1lk5A.t2k-w0.5.mod(22): Reading nostruct-align/1lk5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lk5A/nostruct-align/1lk5A.t2k-w0.5.mod (nostruct-align/1lk5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lk5A/nostruct-align/1lk5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.192839 /projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod(21): Reading nostruct-align/1egiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod (nostruct-align/1egiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.637838 /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod(21): Reading nostruct-align/1thjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-2358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod (nostruct-align/1thjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.212868 /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod(22): Reading nostruct-align/1guqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod (nostruct-align/1guqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.486877 /projects/compbio/experiments/models.97/pdb/1k/1kv9A/nostruct-align/1kv9A.t2k-w0.5.mod(22): Reading nostruct-align/1kv9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv9A/nostruct-align/1kv9A.t2k-w0.5.mod (nostruct-align/1kv9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kv9A/nostruct-align/1kv9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.789852 /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod(21): Reading nostruct-align/1b1cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod (nostruct-align/1b1cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.202835 /projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod(22): Reading nostruct-align/1f0mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod (nostruct-align/1f0mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.620878 /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod(21): Reading nostruct-align/1drmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod (nostruct-align/1drmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.848864 /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21): Reading nostruct-align/1cec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod (nostruct-align/1cec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.211849 /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod(21): Reading nostruct-align/1aoiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22951/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod (nostruct-align/1aoiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.839870 /projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod(21): Reading nostruct-align/1ga3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-26690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod (nostruct-align/1ga3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.062830 /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod(21): Reading nostruct-align/1aoiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod (nostruct-align/1aoiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.691858 /projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod(22): Reading nostruct-align/1yal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-29004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod (nostruct-align/1yal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.106850 /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod(21): Reading nostruct-align/1aoiC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-18175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod (nostruct-align/1aoiC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.272869 /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod(21): Reading nostruct-align/1aoiD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-16441/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod (nostruct-align/1aoiD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.649887 /projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod(21): Reading nostruct-align/1qlpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-22888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod (nostruct-align/1qlpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.219866 /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod(21): Reading nostruct-align/1aoiF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod (nostruct-align/1aoiF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.840872 /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod(21): Reading nostruct-align/1cei.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod (nostruct-align/1cei.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.626837 /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod(21): Reading nostruct-align/1aoiG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-21159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod (nostruct-align/1aoiG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.667873 /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod(22): Reading nostruct-align/1joa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-4072/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod (nostruct-align/1joa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.593889 /projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod(22): Reading nostruct-align/1dywA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-9958/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod (nostruct-align/1dywA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.066870 /projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod(22): Reading nostruct-align/1avsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod (nostruct-align/1avsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.596859 /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod(22): Reading nostruct-align/1cem.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod (nostruct-align/1cem.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.756884 /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod(21): Reading nostruct-align/2fua.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod (nostruct-align/2fua.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.803829 /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading nostruct-align/1ceo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.347879 /projects/compbio/experiments/models.97/pdb/1i/1iufA/nostruct-align/1iufA.t2k-w0.5.mod(22): Reading nostruct-align/1iufA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iufA/nostruct-align/1iufA.t2k-w0.5.mod (nostruct-align/1iufA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iufA/nostruct-align/1iufA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.814829 /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21): Reading nostruct-align/1k3fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod (nostruct-align/1k3fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.082867 /projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod(22): Reading nostruct-align/1d0yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod (nostruct-align/1d0yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.796881 /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod(21): Reading nostruct-align/4fiv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-21386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod (nostruct-align/4fiv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.495836 /projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod(22): Reading nostruct-align/1jqlB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod (nostruct-align/1jqlB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.365873 /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod(21): Reading nostruct-align/1p04A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod (nostruct-align/1p04A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.152828 /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod(21): Reading nostruct-align/1gnhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-27378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod (nostruct-align/1gnhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.032883 /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod(22): Reading nostruct-align/1cex.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19783/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod (nostruct-align/1cex.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.177862 /projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod(22): Reading nostruct-align/1ci3M.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod (nostruct-align/1ci3M.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.711851 /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod(21): Reading nostruct-align/1bzbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod (nostruct-align/1bzbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.783873 /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod(21): Reading nostruct-align/1d8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-26342/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod (nostruct-align/1d8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.693882 /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod(22): Reading nostruct-align/1bdfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11801/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod (nostruct-align/1bdfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.587883 /projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod(22): Reading nostruct-align/1i50A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-1334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod (nostruct-align/1i50A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.283875 /projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod(22): Reading nostruct-align/1i50B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-17897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod (nostruct-align/1i50B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.267839 /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod(21): Reading nostruct-align/1qyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8050/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod (nostruct-align/1qyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.227888 /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod(22): Reading nostruct-align/1cfb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6079/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod (nostruct-align/1cfb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.932878 /projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod(21): Reading nostruct-align/1f0nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod (nostruct-align/1f0nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.431833 /projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod(22): Reading nostruct-align/1i50C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1425/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod (nostruct-align/1i50C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.986870 /projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod(22): Reading nostruct-align/1hs6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9146/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod (nostruct-align/1hs6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.367867 /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod(22): Reading nostruct-align/1nbcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12338/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod (nostruct-align/1nbcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.608847 /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod(21): Reading nostruct-align/1aojA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod (nostruct-align/1aojA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.083832 /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod(21): Reading nostruct-align/1cfe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod (nostruct-align/1cfe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.354872 /projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod(22): Reading nostruct-align/1i50F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod (nostruct-align/1i50F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.654861 /projects/compbio/experiments/models.97/pdb/5b/5bcaA/nostruct-align/5bcaA.t2k-w0.5.mod(22): Reading nostruct-align/5bcaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-1383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5b/5bcaA/nostruct-align/5bcaA.t2k-w0.5.mod (nostruct-align/5bcaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5b/5bcaA/nostruct-align/5bcaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.943836 /projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod(21): Reading nostruct-align/1ep2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod (nostruct-align/1ep2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.859854 /projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod(22): Reading nostruct-align/1i50H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod (nostruct-align/1i50H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.586843 /projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod(21): Reading nostruct-align/1cfg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-26115/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod (nostruct-align/1cfg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.250874 /projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod(22): Reading nostruct-align/1i50I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod (nostruct-align/1i50I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.793854 /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod(21): Reading nostruct-align/1bkpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-24779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod (nostruct-align/1bkpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.955837 /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod(21): Reading nostruct-align/1cfh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod (nostruct-align/1cfh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.118830 /projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod(22): Reading nostruct-align/1i50J.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26882/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod (nostruct-align/1i50J.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.261847 /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod(22): Reading nostruct-align/1cfi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-21782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod (nostruct-align/1cfi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.121855 /projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod(22): Reading nostruct-align/1i50K.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod (nostruct-align/1i50K.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.333883 /projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod(22): Reading nostruct-align/1i50L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod (nostruct-align/1i50L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.060839 /projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod(22): Reading nostruct-align/1ci4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7067/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod (nostruct-align/1ci4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.516844 /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod(22): Reading nostruct-align/1jpc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod (nostruct-align/1jpc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.503887 /projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod(22): Reading nostruct-align/1kfiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7695/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod (nostruct-align/1kfiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.498833 /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod(22): Reading nostruct-align/1cfr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod (nostruct-align/1cfr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.622875 /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod(22): Reading nostruct-align/1qu9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod (nostruct-align/1qu9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.326828 /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod(22): Reading nostruct-align/6rlxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod (nostruct-align/6rlxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.127876 /projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod(22): Reading nostruct-align/1qu9C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-13286/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod (nostruct-align/1qu9C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.375875 /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod(22): Reading nostruct-align/6rlxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod (nostruct-align/6rlxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.621843 /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod(21): Reading nostruct-align/1yrnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-4106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod (nostruct-align/1yrnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.610882 /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod(21): Reading nostruct-align/1yrnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod (nostruct-align/1yrnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.986881 /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod(22): Reading nostruct-align/1d8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12196/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod (nostruct-align/1d8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.403835 /projects/compbio/experiments/models.97/pdb/1l/1l6wA/nostruct-align/1l6wA.t2k-w0.5.mod(22): Reading nostruct-align/1l6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30207/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6wA/nostruct-align/1l6wA.t2k-w0.5.mod (nostruct-align/1l6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l6wA/nostruct-align/1l6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.249865 /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod(21): Reading nostruct-align/1tabI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29948/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod (nostruct-align/1tabI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.329836 /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod(21): Reading nostruct-align/1ycc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod (nostruct-align/1ycc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.332838 /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod(21): Reading nostruct-align/1cviA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod (nostruct-align/1cviA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.986864 /projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod(21): Reading nostruct-align/1e4iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod (nostruct-align/1e4iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.340855 /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod(21): Reading nostruct-align/2fx2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod (nostruct-align/2fx2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.063879 /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod(22): Reading nostruct-align/1fcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8598/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod (nostruct-align/1fcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.660852 /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod(22): Reading nostruct-align/1otfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod (nostruct-align/1otfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.023874 /projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod(21): Reading nostruct-align/1hs7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14758/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod (nostruct-align/1hs7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.489843 /projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod(21): Reading nostruct-align/2fvx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod (nostruct-align/2fvx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.393888 /projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod(21): Reading nostruct-align/1aokB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod (nostruct-align/1aokB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.432859 /projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod(21): Reading nostruct-align/1ep3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod (nostruct-align/1ep3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.369877 /projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod(22): Reading nostruct-align/1ep3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod (nostruct-align/1ep3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.814878 /projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod(21): Reading nostruct-align/1sspE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod (nostruct-align/1sspE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.549868 /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22): Reading nostruct-align/1b8oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod (nostruct-align/1b8oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.255850 /projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod(21): Reading nostruct-align/1f97A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-24629/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod (nostruct-align/1f97A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.560850 /projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod(21): Reading nostruct-align/1jjdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-31944/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod (nostruct-align/1jjdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.648857 /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod(21): Reading nostruct-align/1cgo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-20355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod (nostruct-align/1cgo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.595860 /projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod(22): Reading nostruct-align/1hqz1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6966/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod (nostruct-align/1hqz1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.081829 /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod(21): Reading nostruct-align/1cgt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod (nostruct-align/1cgt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.614851 /projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod(21): Reading nostruct-align/1vokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod (nostruct-align/1vokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.584829 /projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod(22): Reading nostruct-align/1d8dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod (nostruct-align/1d8dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.645842 /projects/compbio/experiments/models.97/pdb/1h/1hqz9/nostruct-align/1hqz9.t2k-w0.5.mod(22): Reading nostruct-align/1hqz9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqz9/nostruct-align/1hqz9.t2k-w0.5.mod (nostruct-align/1hqz9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hqz9/nostruct-align/1hqz9.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.807882 /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod(21): Reading nostruct-align/1d8dB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod (nostruct-align/1d8dB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.177841 /projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod(22): Reading nostruct-align/1h7nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod (nostruct-align/1h7nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.405848 /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod(22): Reading nostruct-align/1l6xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod (nostruct-align/1l6xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.062851 /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod(22): Reading nostruct-align/1l6xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod (nostruct-align/1l6xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.912828 /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod(21): Reading nostruct-align/1cvjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12627/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod (nostruct-align/1cvjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.399847 /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod(22): Reading nostruct-align/1gutA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod (nostruct-align/1gutA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.010862 /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod(22): Reading nostruct-align/1i52A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod (nostruct-align/1i52A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.102875 /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod(21): Reading nostruct-align/1fe0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-23775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod (nostruct-align/1fe0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.681828 /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod(22): Reading nostruct-align/1otgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod (nostruct-align/1otgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.828867 /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod(21): Reading nostruct-align/1chc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod (nostruct-align/1chc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.262838 /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod(22): Reading nostruct-align/1chd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod (nostruct-align/1chd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.282841 /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod(22): Reading nostruct-align/1ga6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod (nostruct-align/1ga6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.869860 /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod(21): Reading nostruct-align/1envA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-13528/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod (nostruct-align/1envA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.821873 /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod(22): Reading nostruct-align/1bkrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod (nostruct-align/1bkrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.117887 /projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod(22): Reading nostruct-align/1b8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18841/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod (nostruct-align/1b8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.178844 /projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod(21): Reading nostruct-align/1dyzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod (nostruct-align/1dyzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.421858 /projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod(21): Reading nostruct-align/1f7zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod (nostruct-align/1f7zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.306864 /projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod(21): Reading nostruct-align/1ykfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-25450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod (nostruct-align/1ykfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.900885 /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod(21): Reading nostruct-align/1chl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod (nostruct-align/1chl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.480852 /projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod(21): Reading nostruct-align/1ci6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod (nostruct-align/1ci6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.140854 /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod(22): Reading nostruct-align/1ax4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28569/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod (nostruct-align/1ax4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.467857 /projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod(21): Reading nostruct-align/1ci6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod (nostruct-align/1ci6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.600878 /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod(22): Reading nostruct-align/1k3iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod (nostruct-align/1k3iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.838844 /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod(21): Reading nostruct-align/2hhmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod (nostruct-align/2hhmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.884871 /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod(21): Reading nostruct-align/1ab8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-2680/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod (nostruct-align/1ab8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.242842 /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod(21): Reading nostruct-align/1hcgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-10886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod (nostruct-align/1hcgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.823877 /projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod(22): Reading nostruct-align/1tadA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-14692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod (nostruct-align/1tadA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.790829 /projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod(21): Reading nostruct-align/1volA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod (nostruct-align/1volA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.174877 /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod(22): Reading nostruct-align/2dpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod (nostruct-align/2dpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.580830 /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod(22): Reading nostruct-align/1dkgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod (nostruct-align/1dkgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.613832 /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod(21): Reading nostruct-align/1dkgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod (nostruct-align/1dkgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.633871 /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod(21): Reading nostruct-align/1dkgD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-483/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod (nostruct-align/1dkgD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.377872 /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod(21): Reading nostruct-align/1coaI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod (nostruct-align/1coaI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.255852 /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod(21): Reading nostruct-align/1pidA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod (nostruct-align/1pidA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.818872 /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod(21): Reading nostruct-align/1pidB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod (nostruct-align/1pidB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.822838 /projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod(22): Reading nostruct-align/1i3uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod (nostruct-align/1i3uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.899841 /projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod(21): Reading nostruct-align/1drqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10305/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod (nostruct-align/1drqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.122881 /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod(21): Reading nostruct-align/1othA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17861/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod (nostruct-align/1othA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.632870 /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod(21): Reading nostruct-align/2jhbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod (nostruct-align/2jhbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.692860 /projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod(21): Reading nostruct-align/1aomA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod (nostruct-align/1aomA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.058884 /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod(22): Reading nostruct-align/1cid.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6502/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod (nostruct-align/1cid.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.221838 /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod(21): Reading nostruct-align/1enwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-32334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod (nostruct-align/1enwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.393837 /projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod(21): Reading nostruct-align/3kinB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-21523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod (nostruct-align/3kinB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.909887 /projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod(21): Reading nostruct-align/1bksA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-8470/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod (nostruct-align/1bksA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.956837 /projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod(21): Reading nostruct-align/1bksB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod (nostruct-align/1bksB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.537849 /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod(21): Reading nostruct-align/1b8qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod (nostruct-align/1b8qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.293858 /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod(21): Reading nostruct-align/1cii.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod (nostruct-align/1cii.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.591837 /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod(21): Reading nostruct-align/1qltA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-26835/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod (nostruct-align/1qltA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.967829 /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod(22): Reading nostruct-align/1jjfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3235/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod (nostruct-align/1jjfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.610863 /projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod(22): Reading nostruct-align/1j7dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22110/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod (nostruct-align/1j7dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.738850 /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod(21): Reading nostruct-align/1nipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod (nostruct-align/1nipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.200830 /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod(21): Reading nostruct-align/1yer.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-31573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod (nostruct-align/1yer.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.081888 /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod(22): Reading nostruct-align/1avwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5011/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod (nostruct-align/1avwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.930859 /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod(21): Reading nostruct-align/1jsf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2289/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod (nostruct-align/1jsf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.383867 /projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod(21): Reading nostruct-align/1ab9C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod (nostruct-align/1ab9C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.997837 /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod(21): Reading nostruct-align/2cthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod (nostruct-align/2cthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.433861 /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod(22): Reading nostruct-align/1gnlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod (nostruct-align/1gnlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.142878 /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k-w0.5.mod(22): Reading nostruct-align/1kmvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k-w0.5.mod (nostruct-align/1kmvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.140848 /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod(21): Reading nostruct-align/1ciy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod (nostruct-align/1ciy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.365883 /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod(22): Reading nostruct-align/1hjrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod (nostruct-align/1hjrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.137846 /projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod(22): Reading nostruct-align/1egnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-31040/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod (nostruct-align/1egnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.454851 /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod(22): Reading nostruct-align/1jz8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod (nostruct-align/1jz8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.223858 /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod(22): Reading nostruct-align/1914.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod (nostruct-align/1914.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.614853 /projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod(22): Reading nostruct-align/1f20A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20059/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod (nostruct-align/1f20A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.009834 /projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod(22): Reading nostruct-align/2cevA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod (nostruct-align/2cevA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.456833 /projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod(22): Reading nostruct-align/1ga8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod (nostruct-align/1ga8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.592857 /projects/compbio/experiments/models.97/pdb/1j/1jjgA/nostruct-align/1jjgA.t2k-w0.5.mod(22): Reading nostruct-align/1jjgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjgA/nostruct-align/1jjgA.t2k-w0.5.mod (nostruct-align/1jjgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjgA/nostruct-align/1jjgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.997866 /projects/compbio/experiments/models.97/pdb/1c/1ci8A/nostruct-align/1ci8A.t2k-w0.5.mod(22): Reading nostruct-align/1ci8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2632/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci8A/nostruct-align/1ci8A.t2k-w0.5.mod (nostruct-align/1ci8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci8A/nostruct-align/1ci8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.861864 /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod(22): Reading nostruct-align/4cpaI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29466/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod (nostruct-align/4cpaI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.987850 /projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod(21): Reading nostruct-align/1hyeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11812/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod (nostruct-align/1hyeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.929878 /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod(21): Reading nostruct-align/2gliA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod (nostruct-align/2gliA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod . Average NLL-Simple NULL score: -40.675842 /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod(21): Reading nostruct-align/1c4xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-27925/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod (nostruct-align/1c4xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.352875 /projects/compbio/experiments/models.97/pdb/1k/1k3kA/nostruct-align/1k3kA.t2k-w0.5.mod(22): Reading nostruct-align/1k3kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3kA/nostruct-align/1k3kA.t2k-w0.5.mod (nostruct-align/1k3kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3kA/nostruct-align/1k3kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.271875 /projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod(21): Reading nostruct-align/1aonO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-21058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod (nostruct-align/1aonO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.456835 /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod(22): Reading nostruct-align/1tafA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod (nostruct-align/1tafA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.807859 /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod(22): Reading nostruct-align/1tafB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14513/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod (nostruct-align/1tafB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.947884 /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod(22): Reading nostruct-align/1dkiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod (nostruct-align/1dkiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.624861 /projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod(21): Reading nostruct-align/1cvmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-25211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod (nostruct-align/1cvmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.906887 /projects/compbio/experiments/models.97/pdb/1g/1gw5A/nostruct-align/1gw5A.t2k-w0.5.mod(22): Reading nostruct-align/1gw5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw5A/nostruct-align/1gw5A.t2k-w0.5.mod (nostruct-align/1gw5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gw5A/nostruct-align/1gw5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.245861 /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod(22): Reading nostruct-align/1yge.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-1723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod (nostruct-align/1yge.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.023872 /projects/compbio/experiments/models.97/pdb/1g/1gw5B/nostruct-align/1gw5B.t2k-w0.5.mod(22): Reading nostruct-align/1gw5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw5B/nostruct-align/1gw5B.t2k-w0.5.mod (nostruct-align/1gw5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gw5B/nostruct-align/1gw5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.923862 /projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod(22): Reading nostruct-align/1f21A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28003/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod (nostruct-align/1f21A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.155832 /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod(21): Reading nostruct-align/2ncm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod (nostruct-align/2ncm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.682852 /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod(21): Reading nostruct-align/5fbpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod (nostruct-align/5fbpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.967838 /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod(22): Reading nostruct-align/1b8sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod (nostruct-align/1b8sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.677860 /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod(22): Reading nostruct-align/1e4mM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18247/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod (nostruct-align/1e4mM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.111860 /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod(22): Reading nostruct-align/1ci9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod (nostruct-align/1ci9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.896852 /projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod(21): Reading nostruct-align/2tmvP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod (nostruct-align/2tmvP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.405846 /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod(22): Reading nostruct-align/1ygs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod (nostruct-align/1ygs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.632872 /projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod(22): Reading nostruct-align/1avyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod (nostruct-align/1avyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.425873 /projects/compbio/experiments/models.97/pdb/1k/1kfnA/nostruct-align/1kfnA.t2k-w0.5.mod(22): Reading nostruct-align/1kfnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9466/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kfnA/nostruct-align/1kfnA.t2k-w0.5.mod (nostruct-align/1kfnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kfnA/nostruct-align/1kfnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.264845 /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod(21): Reading nostruct-align/1avyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-11015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod (nostruct-align/1avyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.023884 /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod(21): Reading nostruct-align/1avyC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-11809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod (nostruct-align/1avyC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.452843 /projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod(21): Reading nostruct-align/1jug.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-11642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod (nostruct-align/1jug.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.347836 /projects/compbio/experiments/models.97/pdb/1g/1gw5S/nostruct-align/1gw5S.t2k-w0.5.mod(22): Reading nostruct-align/1gw5S.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw5S/nostruct-align/1gw5S.t2k-w0.5.mod (nostruct-align/1gw5S.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gw5S/nostruct-align/1gw5S.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.315836 /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod(21): Reading nostruct-align/1juk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod (nostruct-align/1juk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.230841 /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod(21): Reading nostruct-align/1ckv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod (nostruct-align/1ckv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.000883 /projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod(22): Reading nostruct-align/1d8hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod (nostruct-align/1d8hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.484886 /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod(21): Reading nostruct-align/1egpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod (nostruct-align/1egpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.548849 /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod(21): Reading nostruct-align/1egpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod (nostruct-align/1egpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.822834 /projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod(22): Reading nostruct-align/1ih8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod (nostruct-align/1ih8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.782873 /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod(22): Reading nostruct-align/1guxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16067/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod (nostruct-align/1guxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.127836 /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod(22): Reading nostruct-align/1guxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod (nostruct-align/1guxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.606865 /projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod(21): Reading nostruct-align/1drtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod (nostruct-align/1drtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.710878 /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod(21): Reading nostruct-align/1l58.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod (nostruct-align/1l58.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.819857 /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod(21): Reading nostruct-align/1cb0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod (nostruct-align/1cb0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.967850 /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod(21): Reading nostruct-align/1clc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod (nostruct-align/1clc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.286842 /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod(22): Reading nostruct-align/2a0b.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25016/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod (nostruct-align/2a0b.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.017834 /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod(21): Reading nostruct-align/1bm4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod (nostruct-align/1bm4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.264837 /projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod(22): Reading nostruct-align/1bkvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod (nostruct-align/1bkvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.084885 /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod(22): Reading nostruct-align/1qlwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod (nostruct-align/1qlwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.819851 /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod(21): Reading nostruct-align/1b8tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17766/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod (nostruct-align/1b8tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.881838 /projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod(22): Reading nostruct-align/1jjiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod (nostruct-align/1jjiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.422844 /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod(21): Reading nostruct-align/1cll.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-24869/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod (nostruct-align/1cll.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.098873 /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod(22): Reading nostruct-align/1c4zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod (nostruct-align/1c4zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.394854 /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod(21): Reading nostruct-align/1tahA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod (nostruct-align/1tahA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.141832 /projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod(21): Reading nostruct-align/1jqsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14867/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod (nostruct-align/1jqsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.808874 /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod(21): Reading nostruct-align/1tahB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-22699/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod (nostruct-align/1tahB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.736862 /projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod(21): Reading nostruct-align/1jqsC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-17915/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod (nostruct-align/1jqsC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.526867 /projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod(22): Reading nostruct-align/1ko7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod (nostruct-align/1ko7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.683870 /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod(21): Reading nostruct-align/1d8iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod (nostruct-align/1d8iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.470865 /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod(21): Reading nostruct-align/1jvr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-24851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod (nostruct-align/1jvr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.250862 /projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod(22): Reading nostruct-align/1h7sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod (nostruct-align/1h7sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.534868 /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod(21): Reading nostruct-align/2nef.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod (nostruct-align/2nef.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.030840 /projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod(21): Reading nostruct-align/1h91A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod (nostruct-align/1h91A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.676851 /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod(22): Reading nostruct-align/1bdmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod (nostruct-align/1bdmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.268833 /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod(22): Reading nostruct-align/1bdmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-23608/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod (nostruct-align/1bdmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.020830 /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod(21): Reading nostruct-align/1aoqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod (nostruct-align/1aoqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.379866 /projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod(21): Reading nostruct-align/2ng1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-13466/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod (nostruct-align/2ng1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.134851 /projects/compbio/experiments/models.97/pdb/1j/1js1X/nostruct-align/1js1X.t2k-w0.5.mod(22): Reading nostruct-align/1js1X.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1js1X/nostruct-align/1js1X.t2k-w0.5.mod (nostruct-align/1js1X.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1js1X/nostruct-align/1js1X.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.542849 /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod(21): Reading nostruct-align/2new.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8435/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod (nostruct-align/2new.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.330872 /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod(22): Reading nostruct-align/1ra9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod (nostruct-align/1ra9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.458857 /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod(21): Reading nostruct-align/1hyhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22145/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod (nostruct-align/1hyhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.445833 /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod(21): Reading nostruct-align/1ddbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20532/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod (nostruct-align/1ddbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.073881 /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod(21): Reading nostruct-align/1cmr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod (nostruct-align/1cmr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.519838 /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod(22): Reading nostruct-align/1pprM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4666/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod (nostruct-align/1pprM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.274828 /projects/compbio/experiments/models.97/pdb/1l/1lbvA/nostruct-align/1lbvA.t2k-w0.5.mod(22): Reading nostruct-align/1lbvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2985/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbvA/nostruct-align/1lbvA.t2k-w0.5.mod (nostruct-align/1lbvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lbvA/nostruct-align/1lbvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.448864 /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod(21): Reading nostruct-align/193l.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod (nostruct-align/193l.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.384842 /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod(21): Reading nostruct-align/3cbh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1841/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod (nostruct-align/3cbh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.814869 /projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod(21): Reading nostruct-align/1dklA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-21993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod (nostruct-align/1dklA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.688841 /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod(21): Reading nostruct-align/1d8jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod (nostruct-align/1d8jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.417843 /projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod(22): Reading nostruct-align/1guzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4044/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod (nostruct-align/1guzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.745846 /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod(22): Reading nostruct-align/1i58A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod (nostruct-align/1i58A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.764830 /projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod(22): Reading nostruct-align/1fe6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod (nostruct-align/1fe6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.717844 /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod(21): Reading nostruct-align/1dt4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-7615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod (nostruct-align/1dt4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.936848 /projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod(22): Reading nostruct-align/1f24A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-31589/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod (nostruct-align/1f24A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.325882 /projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod(21): Reading nostruct-align/1fe6C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod (nostruct-align/1fe6C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.642883 /projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod(21): Reading nostruct-align/1cb2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod (nostruct-align/1cb2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.882879 /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod(21): Reading nostruct-align/1aorA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-12735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod (nostruct-align/1aorA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.480864 /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod(22): Reading nostruct-align/1aq0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod (nostruct-align/1aq0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.070827 /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod(21): Reading nostruct-align/1cne.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-30461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod (nostruct-align/1cne.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.244837 /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod(22): Reading nostruct-align/3cd4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-694/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod (nostruct-align/3cd4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.062868 /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod(21): Reading nostruct-align/1mmoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod (nostruct-align/1mmoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.997881 /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod(21): Reading nostruct-align/1qlyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod (nostruct-align/1qlyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.392885 /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod(21): Reading nostruct-align/1mmoD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod (nostruct-align/1mmoD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.117834 /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod(22): Reading nostruct-align/1rb9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod (nostruct-align/1rb9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.474873 /projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod(21): Reading nostruct-align/1j7iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-17269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod (nostruct-align/1j7iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.785860 /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod(21): Reading nostruct-align/1gggB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod (nostruct-align/1gggB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.336887 /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod(21): Reading nostruct-align/1mmoG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2170/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod (nostruct-align/1mmoG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.209887 /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod(21): Reading nostruct-align/1ddcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod (nostruct-align/1ddcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.020868 /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod(21): Reading nostruct-align/1cnr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12119/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod (nostruct-align/1cnr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.883888 /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod(21): Reading nostruct-align/1wdnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-31910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod (nostruct-align/1wdnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.139887 /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod(22): Reading nostruct-align/1mtyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod (nostruct-align/1mtyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.999884 /projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod(22): Reading nostruct-align/1js3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod (nostruct-align/1js3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.696873 /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod(22): Reading nostruct-align/1mtyD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod (nostruct-align/1mtyD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.003839 /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod(22): Reading nostruct-align/1cnv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10774/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod (nostruct-align/1cnv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.034880 /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod(22): Reading nostruct-align/1mtyG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod (nostruct-align/1mtyG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.209887 /projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod(22): Reading nostruct-align/1ko9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod (nostruct-align/1ko9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.826878 /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod(21): Reading nostruct-align/2ztaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod (nostruct-align/2ztaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.051865 /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod(21): Reading nostruct-align/1bzkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-6087/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod (nostruct-align/1bzkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.504862 /projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod(22): Reading nostruct-align/1ei1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod (nostruct-align/1ei1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.026850 /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod(21): Reading nostruct-align/2bbkH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod (nostruct-align/2bbkH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.939857 /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod(22): Reading nostruct-align/1thtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod (nostruct-align/1thtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.478863 /projects/compbio/experiments/models.97/pdb/1g/1gw9A/nostruct-align/1gw9A.t2k-w0.5.mod(22): Reading nostruct-align/1gw9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw9A/nostruct-align/1gw9A.t2k-w0.5.mod (nostruct-align/1gw9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gw9A/nostruct-align/1gw9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.824867 /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod(22): Reading nostruct-align/1fcyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-1006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod (nostruct-align/1fcyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.117882 /projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod(21): Reading nostruct-align/1fe7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6580/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod (nostruct-align/1fe7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.438881 /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod(22): Reading nostruct-align/2bbkL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1346/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod (nostruct-align/2bbkL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.163881 /projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod(21): Reading nostruct-align/1ravA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod (nostruct-align/1ravA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.375854 /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod(21): Reading nostruct-align/1cof.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-13128/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod (nostruct-align/1cof.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.000866 /projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod(21): Reading nostruct-align/1coi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod (nostruct-align/1coi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.783834 /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod(21): Reading nostruct-align/1qlzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod (nostruct-align/1qlzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.037868 /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod(21): Reading nostruct-align/1b8wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12476/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod (nostruct-align/1b8wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.488857 /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod(21): Reading nostruct-align/1u9aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30381/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod (nostruct-align/1u9aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.905863 /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod(21): Reading nostruct-align/1lxtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod (nostruct-align/1lxtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.484829 /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod(21): Reading nostruct-align/1vhiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod (nostruct-align/1vhiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.089870 /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod(21): Reading nostruct-align/1coo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod (nostruct-align/1coo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.050854 /projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod(22): Reading nostruct-align/1evfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7247/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod (nostruct-align/1evfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.433865 /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod(22): Reading nostruct-align/1cor.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-8477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod (nostruct-align/1cor.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.938860 /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod(22): Reading nostruct-align/1hcnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod (nostruct-align/1hcnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.473843 /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod(22): Reading nostruct-align/1hcnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod (nostruct-align/1hcnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.841866 /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod(21): Reading nostruct-align/1cot.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12259/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod (nostruct-align/1cot.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.739862 /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod(21): Reading nostruct-align/2a3dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-25793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod (nostruct-align/2a3dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.391869 /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod(22): Reading nostruct-align/1gp0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod (nostruct-align/1gp0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.193829 /projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod(22): Reading nostruct-align/1fyvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod (nostruct-align/1fyvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.223839 /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod(21): Reading nostruct-align/1ahjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-9840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod (nostruct-align/1ahjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.314888 /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod(21): Reading nostruct-align/1l92.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31698/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod (nostruct-align/1l92.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.103838 /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod(22): Reading nostruct-align/1cvrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod (nostruct-align/1cvrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.792887 /projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod(21): Reading nostruct-align/1rbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod (nostruct-align/1rbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.614834 /projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod(21): Reading nostruct-align/1dt6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod (nostruct-align/1dt6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.447830 /projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod(22): Reading nostruct-align/1f0xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod (nostruct-align/1f0xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.372883 /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod(21): Reading nostruct-align/1bkzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-17729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod (nostruct-align/1bkzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.115841 /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod(21): Reading nostruct-align/1nbmG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod (nostruct-align/1nbmG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.315863 /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod(21): Reading nostruct-align/1b8xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod (nostruct-align/1b8xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.366861 /projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod(21): Reading nostruct-align/1dzaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-5542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod (nostruct-align/1dzaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.462835 /projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod(21): Reading nostruct-align/1hykA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26601/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod (nostruct-align/1hykA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.086857 /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod(21): Reading nostruct-align/1cpn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod (nostruct-align/1cpn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.497869 /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod(22): Reading nostruct-align/1cpo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod (nostruct-align/1cpo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.453871 /projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod(21): Reading nostruct-align/1ddeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod (nostruct-align/1ddeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.712887 /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod(22): Reading nostruct-align/1cpq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-8595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod (nostruct-align/1cpq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.107841 /projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod(21): Reading nostruct-align/2afgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9907/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod (nostruct-align/2afgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.356850 /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod(21): Reading nostruct-align/1cpt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod (nostruct-align/1cpt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.816874 /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod(21): Reading nostruct-align/1rcb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-12327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod (nostruct-align/1rcb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.048847 /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod(21): Reading nostruct-align/1rpjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod (nostruct-align/1rpjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.139872 /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod(21): Reading nostruct-align/1rcd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod (nostruct-align/1rcd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.568857 /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod(22): Reading nostruct-align/1gp1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod (nostruct-align/1gp1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.554884 /projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod(21): Reading nostruct-align/2bbmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod (nostruct-align/2bbmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.730839 /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod(21): Reading nostruct-align/1rcf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod (nostruct-align/1rcf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.130863 /projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod(21): Reading nostruct-align/1h7wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod (nostruct-align/1h7wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.819880 /projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod(22): Reading nostruct-align/1eguA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod (nostruct-align/1eguA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.441885 /projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod(21): Reading nostruct-align/1h7wB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod (nostruct-align/1h7wB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.948835 /projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod(21): Reading nostruct-align/1e4sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod (nostruct-align/1e4sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.921881 /projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod(21): Reading nostruct-align/1h7wD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod (nostruct-align/1h7wD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.161871 /projects/compbio/experiments/models.97/pdb/1k/1kufA/nostruct-align/1kufA.t2k-w0.5.mod(22): Reading nostruct-align/1kufA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kufA/nostruct-align/1kufA.t2k-w0.5.mod (nostruct-align/1kufA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kufA/nostruct-align/1kufA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.184881 /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod(21): Reading nostruct-align/1qg0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod (nostruct-align/1qg0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.785873 /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod(21): Reading nostruct-align/1cvsC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20850/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod (nostruct-align/1cvsC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.571877 /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod(21): Reading nostruct-align/451c.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-20772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod (nostruct-align/451c.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.261854 /projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod(22): Reading nostruct-align/1dryA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod (nostruct-align/1dryA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.906862 /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod(22): Reading nostruct-align/1f0yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod (nostruct-align/1f0yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.466850 /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod(22): Reading nostruct-align/1bm9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19086/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod (nostruct-align/1bm9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.766869 /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod(21): Reading nostruct-align/1rcy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31071/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod (nostruct-align/1rcy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.806852 /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod(21): Reading nostruct-align/1hylA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod (nostruct-align/1hylA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.562851 /projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod(22): Reading nostruct-align/1j7lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod (nostruct-align/1j7lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.752872 /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod(22): Reading nostruct-align/1evhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod (nostruct-align/1evhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.417881 /projects/compbio/experiments/models.97/pdb/1k/1k3rA/nostruct-align/1k3rA.t2k-w0.5.mod(22): Reading nostruct-align/1k3rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3rA/nostruct-align/1k3rA.t2k-w0.5.mod (nostruct-align/1k3rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3rA/nostruct-align/1k3rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.114857 /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod(21): Reading nostruct-align/1d1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-15059/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod (nostruct-align/1d1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.510859 /projects/compbio/experiments/models.97/pdb/1l/1ld8A/nostruct-align/1ld8A.t2k-w0.5.mod(22): Reading nostruct-align/1ld8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3719/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ld8A/nostruct-align/1ld8A.t2k-w0.5.mod (nostruct-align/1ld8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ld8A/nostruct-align/1ld8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.916883 /projects/compbio/experiments/models.97/pdb/1l/1ld8B/nostruct-align/1ld8B.t2k-w0.5.mod(22): Reading nostruct-align/1ld8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ld8B/nostruct-align/1ld8B.t2k-w0.5.mod (nostruct-align/1ld8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ld8B/nostruct-align/1ld8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.455858 /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod(21): Reading nostruct-align/1cojA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-30179/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod (nostruct-align/1cojA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.994835 /projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod(22): Reading nostruct-align/1gntA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23141/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod (nostruct-align/1gntA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.092884 /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod(21): Reading nostruct-align/1rdg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-24416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod (nostruct-align/1rdg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.722874 /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod(22): Reading nostruct-align/1yna.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4136/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod (nostruct-align/1yna.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.634878 /projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod(22): Reading nostruct-align/1fyxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod (nostruct-align/1fyxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.339861 /projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod(21): Reading nostruct-align/1h7xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-12604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod (nostruct-align/1h7xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.090881 /projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod(22): Reading nostruct-align/1h96A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5640/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod (nostruct-align/1h96A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.022865 /projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod(21): Reading nostruct-align/1gp2G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17458/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod (nostruct-align/1gp2G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.756832 /projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod(21): Reading nostruct-align/1h7xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod (nostruct-align/1h7xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.596844 /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod(22): Reading nostruct-align/1jyaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod (nostruct-align/1jyaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.495865 /projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod(21): Reading nostruct-align/1e4tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20283/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod (nostruct-align/1e4tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.827875 /projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod(21): Reading nostruct-align/1h7xC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24731/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod (nostruct-align/1h7xC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.197872 /projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod(21): Reading nostruct-align/1h7xD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod (nostruct-align/1h7xD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.056885 /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod(21): Reading nostruct-align/1mfiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32251/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod (nostruct-align/1mfiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.571833 /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k-w0.5.mod(22): Reading nostruct-align/1kugA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k-w0.5.mod (nostruct-align/1kugA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.950884 /projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod(22): Reading nostruct-align/1f28A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-22805/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod (nostruct-align/1f28A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.877844 /projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod(21): Reading nostruct-align/1crb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod (nostruct-align/1crb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.694878 /projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod(21): Reading nostruct-align/1f0zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3995/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod (nostruct-align/1f0zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.814863 /projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod(22): Reading nostruct-align/1jceA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod (nostruct-align/1jceA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.453846 /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod(22): Reading nostruct-align/1rdr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod (nostruct-align/1rdr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.725864 /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod(21): Reading nostruct-align/1cb6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1383/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod (nostruct-align/1cb6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.974844 /projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod(22): Reading nostruct-align/1rds.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod (nostruct-align/1rds.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.901888 /projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod(22): Reading nostruct-align/1mmsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19505/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod (nostruct-align/1mmsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.412886 /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod(22): Reading nostruct-align/1b8zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod (nostruct-align/1b8zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.242867 /projects/compbio/experiments/models.97/pdb/1j/1jjoA/nostruct-align/1jjoA.t2k-w0.5.mod(22): Reading nostruct-align/1jjoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4666/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjoA/nostruct-align/1jjoA.t2k-w0.5.mod (nostruct-align/1jjoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjoA/nostruct-align/1jjoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.167833 /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod(21): Reading nostruct-align/1crl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-5474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod (nostruct-align/1crl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.819885 /projects/compbio/experiments/models.97/pdb/1j/1jjoC/nostruct-align/1jjoC.t2k-w0.5.mod(22): Reading nostruct-align/1jjoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjoC/nostruct-align/1jjoC.t2k-w0.5.mod (nostruct-align/1jjoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjoC/nostruct-align/1jjoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.628876 /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod(21): Reading nostruct-align/1hymA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10393/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod (nostruct-align/1hymA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.590834 /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod(21): Reading nostruct-align/1ribA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod (nostruct-align/1ribA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.163841 /projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod(21): Reading nostruct-align/1crn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod (nostruct-align/1crn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.890882 /projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod(21): Reading nostruct-align/1hymB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17343/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod (nostruct-align/1hymB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.680872 /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod(22): Reading nostruct-align/1g4iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod (nostruct-align/1g4iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.756886 /projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod(22): Reading nostruct-align/1k51A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod (nostruct-align/1k51A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.418856 /projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod(21): Reading nostruct-align/1ddgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod (nostruct-align/1ddgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.386848 /projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod(22): Reading nostruct-align/1k3sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14137/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod (nostruct-align/1k3sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.614843 /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod(21): Reading nostruct-align/1hcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-10000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod (nostruct-align/1hcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.852859 /projects/compbio/experiments/models.97/pdb/1q/1qtfA/nostruct-align/1qtfA.t2k-w0.5.mod(22): Reading nostruct-align/1qtfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-10303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtfA/nostruct-align/1qtfA.t2k-w0.5.mod (nostruct-align/1qtfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtfA/nostruct-align/1qtfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.066870 /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod(22): Reading nostruct-align/1rec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-12280/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod (nostruct-align/1rec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.869841 /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod(21): Reading nostruct-align/1cokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod (nostruct-align/1cokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.740837 /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod(22): Reading nostruct-align/1gnuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod (nostruct-align/1gnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.187860 /projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod(22): Reading nostruct-align/1dkqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod (nostruct-align/1dkqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.785845 /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod(22): Reading nostruct-align/1h97A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod (nostruct-align/1h97A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.738873 /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod(22): Reading nostruct-align/1egwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod (nostruct-align/1egwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.429842 /projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod(21): Reading nostruct-align/1ei5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19391/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod (nostruct-align/1ei5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.239868 /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod(22): Reading nostruct-align/1pinA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod (nostruct-align/1pinA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.576859 /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod(21): Reading nostruct-align/2gar.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod (nostruct-align/2gar.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.465851 /projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod(21): Reading nostruct-align/1e4uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod (nostruct-align/1e4uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.454853 /projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod(22): Reading nostruct-align/2fibA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-6171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod (nostruct-align/2fibA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.400856 /projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod(22): Reading nostruct-align/1jcfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod (nostruct-align/1jcfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.870865 /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod(21): Reading nostruct-align/1dt9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod (nostruct-align/1dt9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.446863 /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod(21): Reading nostruct-align/1hrdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod (nostruct-align/1hrdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.151888 /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod(21): Reading nostruct-align/1res.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29305/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod (nostruct-align/1res.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.557848 /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod(21): Reading nostruct-align/1cb7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod (nostruct-align/1cb7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.493828 /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod(21): Reading nostruct-align/1aq5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18160/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod (nostruct-align/1aq5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.820881 /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod(21): Reading nostruct-align/1ret.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod (nostruct-align/1ret.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.560835 /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod(21): Reading nostruct-align/19hcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod (nostruct-align/19hcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.375872 /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod(22): Reading nostruct-align/1csh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod (nostruct-align/1csh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.170858 /projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod(22): Reading nostruct-align/1j7nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod (nostruct-align/1j7nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.866848 /projects/compbio/experiments/models.97/pdb/1j/1j7nB/nostruct-align/1j7nB.t2k-w0.5.mod(22): Reading nostruct-align/1j7nB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-26763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7nB/nostruct-align/1j7nB.t2k-w0.5.mod (nostruct-align/1j7nB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7nB/nostruct-align/1j7nB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.837835 /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod(21): Reading nostruct-align/1csn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod (nostruct-align/1csn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.228849 /projects/compbio/experiments/models.97/pdb/1i/1iw2A/nostruct-align/1iw2A.t2k-w0.5.mod(22): Reading nostruct-align/1iw2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-11921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iw2A/nostruct-align/1iw2A.t2k-w0.5.mod (nostruct-align/1iw2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iw2A/nostruct-align/1iw2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.899860 /projects/compbio/experiments/models.97/pdb/1k/1k3tA/nostruct-align/1k3tA.t2k-w0.5.mod(22): Reading nostruct-align/1k3tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-32205/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3tA/nostruct-align/1k3tA.t2k-w0.5.mod (nostruct-align/1k3tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k3tA/nostruct-align/1k3tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.191853 /projects/compbio/experiments/models.97/pdb/1k/1k52A/nostruct-align/1k52A.t2k-w0.5.mod(22): Reading nostruct-align/1k52A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-12351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k52A/nostruct-align/1k52A.t2k-w0.5.mod (nostruct-align/1k52A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k52A/nostruct-align/1k52A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.455868 /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod(22): Reading nostruct-align/1seiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod (nostruct-align/1seiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.110863 /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod(22): Reading nostruct-align/1hcrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14425/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod (nostruct-align/1hcrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.831839 /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod(22): Reading nostruct-align/1frpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod (nostruct-align/1frpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.834860 /projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod(22): Reading nostruct-align/1js8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod (nostruct-align/1js8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.934870 /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod(22): Reading nostruct-align/1colA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod (nostruct-align/1colA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.624882 /projects/compbio/experiments/models.97/pdb/1g/1gp4A/nostruct-align/1gp4A.t2k-w0.5.mod(22): Reading nostruct-align/1gp4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp4A/nostruct-align/1gp4A.t2k-w0.5.mod (nostruct-align/1gp4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp4A/nostruct-align/1gp4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.197880 /projects/compbio/experiments/models.97/pdb/1r/1rpmA/nostruct-align/1rpmA.t2k-w0.5.mod(22): Reading nostruct-align/1rpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpmA/nostruct-align/1rpmA.t2k-w0.5.mod (nostruct-align/1rpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpmA/nostruct-align/1rpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.643887 /projects/compbio/experiments/models.97/pdb/2r/2rusB/nostruct-align/2rusB.t2k-w0.5.mod(22): Reading nostruct-align/2rusB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rusB/nostruct-align/2rusB.t2k-w0.5.mod (nostruct-align/2rusB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rusB/nostruct-align/2rusB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.516857 /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod(21): Reading nostruct-align/1dkrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod (nostruct-align/1dkrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.248848 /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod(22): Reading nostruct-align/1dm0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod (nostruct-align/1dm0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.926846 /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod(21): Reading nostruct-align/1bzpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod (nostruct-align/1bzpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.455872 /projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod(22): Reading nostruct-align/2hpaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26322/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod (nostruct-align/2hpaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.590834 /projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod(22): Reading nostruct-align/1hynP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod (nostruct-align/1hynP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.253851 /projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod(22): Reading nostruct-align/1h98A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod (nostruct-align/1h98A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.892862 /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod(21): Reading nostruct-align/1h7zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod (nostruct-align/1h7zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.397871 /projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod(21): Reading nostruct-align/2gbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod (nostruct-align/2gbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.410831 /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod(21): Reading nostruct-align/1pioA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-15497/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod (nostruct-align/1pioA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.712862 /projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod(21): Reading nostruct-align/1cx4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-28409/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod (nostruct-align/1cx4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.945837 /projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod(21): Reading nostruct-align/1bdtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod (nostruct-align/1bdtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.306835 /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod(22): Reading nostruct-align/1qg3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20814/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod (nostruct-align/1qg3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.167841 /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod(21): Reading nostruct-align/1cb8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23010/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod (nostruct-align/1cb8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.924879 /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod(21): Reading nostruct-align/1rfs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod (nostruct-align/1rfs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.566866 /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod(21): Reading nostruct-align/1aoxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21636/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod (nostruct-align/1aoxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.960846 /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod(21): Reading nostruct-align/1aq6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod (nostruct-align/1aq6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.449837 /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod(22): Reading nostruct-align/1ctf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24784/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod (nostruct-align/1ctf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.034842 /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod(22): Reading nostruct-align/1rh4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod (nostruct-align/1rh4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.876850 /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod(22): Reading nostruct-align/3chy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-17924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod (nostruct-align/3chy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.406853 /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod(22): Reading nostruct-align/1ctj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23442/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod (nostruct-align/1ctj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.532845 /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod(22): Reading nostruct-align/1f8eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25075/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod (nostruct-align/1f8eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.392830 /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod(21): Reading nostruct-align/1ctl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-9461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod (nostruct-align/1ctl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.889862 /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod(22): Reading nostruct-align/1hyoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod (nostruct-align/1hyoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.113853 /projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod(22): Reading nostruct-align/2glsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26206/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod (nostruct-align/2glsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.983864 /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod(21): Reading nostruct-align/1ctn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27258/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod (nostruct-align/1ctn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.370834 /projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod(22): Reading nostruct-align/1kh5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod (nostruct-align/1kh5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.424885 /projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod(21): Reading nostruct-align/4xiaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod (nostruct-align/4xiaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.305874 /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod(21): Reading nostruct-align/1cto.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-11926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod (nostruct-align/1cto.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.811876 /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod(21): Reading nostruct-align/1e2o.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-2999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod (nostruct-align/1e2o.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.562830 /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod(21): Reading nostruct-align/2gcc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod (nostruct-align/2gcc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.004856 /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod(22): Reading nostruct-align/1d1gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2760/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod (nostruct-align/1d1gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.119886 /projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod(22): Reading nostruct-align/1he1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod (nostruct-align/1he1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.920849 /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod(22): Reading nostruct-align/1ctt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod (nostruct-align/1ctt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.510876 /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod(21): Reading nostruct-align/1gnwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7851/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod (nostruct-align/1gnwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.199877 /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod(21): Reading nostruct-align/3minB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-3466/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod (nostruct-align/3minB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.147835 /projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod(22): Reading nostruct-align/1dm1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod (nostruct-align/1dm1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.396832 /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod(21): Reading nostruct-align/3minC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24376/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod (nostruct-align/3minC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.368843 /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod(22): Reading nostruct-align/1cv8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod (nostruct-align/1cv8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.286888 /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod(21): Reading nostruct-align/1sltA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod (nostruct-align/1sltA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.132833 /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod(21): Reading nostruct-align/1sltB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-4831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod (nostruct-align/1sltB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.110859 /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod(22): Reading nostruct-align/1h99A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod (nostruct-align/1h99A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.885843 /projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod(22): Reading nostruct-align/1ei7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod (nostruct-align/1ei7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.546844 /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod(21): Reading nostruct-align/3erdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod (nostruct-align/3erdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.127867 /projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod(21): Reading nostruct-align/1ei7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-2474/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod (nostruct-align/1ei7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.479866 /projects/compbio/experiments/models.97/pdb/1j/1jchC/nostruct-align/1jchC.t2k-w0.5.mod(22): Reading nostruct-align/1jchC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jchC/nostruct-align/1jchC.t2k-w0.5.mod (nostruct-align/1jchC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jchC/nostruct-align/1jchC.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.568834 /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod(21): Reading nostruct-align/1rgs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31899/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod (nostruct-align/1rgs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.054869 /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod(22): Reading nostruct-align/1inlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod (nostruct-align/1inlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.575851 /projects/compbio/experiments/models.97/pdb/1j/1jjrA/nostruct-align/1jjrA.t2k-w0.5.mod(22): Reading nostruct-align/1jjrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjrA/nostruct-align/1jjrA.t2k-w0.5.mod (nostruct-align/1jjrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjrA/nostruct-align/1jjrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.718876 /projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod(22): Reading nostruct-align/1cuk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod (nostruct-align/1cuk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.151861 /projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod(22): Reading nostruct-align/1dzfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod (nostruct-align/1dzfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.467859 /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod(22): Reading nostruct-align/1jl0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod (nostruct-align/1jl0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.853865 /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod(22): Reading nostruct-align/1evlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod (nostruct-align/1evlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.814884 /projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod(21): Reading nostruct-align/1ddjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod (nostruct-align/1ddjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.400835 /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod(21): Reading nostruct-align/5ukdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod (nostruct-align/5ukdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.303854 /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod(21): Reading nostruct-align/1cur.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16750/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod (nostruct-align/1cur.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.838861 /projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod(21): Reading nostruct-align/1d1hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9564/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod (nostruct-align/1d1hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.684883 /projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod(21): Reading nostruct-align/1he2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod (nostruct-align/1he2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.145884 /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod(21): Reading nostruct-align/1cus.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-12664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod (nostruct-align/1cus.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.914841 /projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod(21): Reading nostruct-align/1frrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-18712/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod (nostruct-align/1frrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.390862 /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod(21): Reading nostruct-align/1pbgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-13468/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod (nostruct-align/1pbgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.168865 /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod(21): Reading nostruct-align/1ia8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-31972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod (nostruct-align/1ia8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.848856 /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod(22): Reading nostruct-align/1gp6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-22936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod (nostruct-align/1gp6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.237888 /projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod(21): Reading nostruct-align/1rhd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4878/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod (nostruct-align/1rhd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.969870 /projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod(21): Reading nostruct-align/1r092.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod (nostruct-align/1r092.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.755863 /projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod(22): Reading nostruct-align/1knaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20254/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod (nostruct-align/1knaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.510880 /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod(22): Reading nostruct-align/2gdm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod (nostruct-align/2gdm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.870859 /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod(21): Reading nostruct-align/1dktB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod (nostruct-align/1dktB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.598843 /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod(22): Reading nostruct-align/1sluA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod (nostruct-align/1sluA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.909878 /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod(21): Reading nostruct-align/4ull.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod (nostruct-align/4ull.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.965849 /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod(21): Reading nostruct-align/1ahpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod (nostruct-align/1ahpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.315886 /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod(22): Reading nostruct-align/1jyeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4263/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod (nostruct-align/1jyeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.187862 /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod(21): Reading nostruct-align/2gf1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod (nostruct-align/2gf1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.609875 /projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod(21): Reading nostruct-align/1bf4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27789/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod (nostruct-align/1bf4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.399887 /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod(22): Reading nostruct-align/1mfmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod (nostruct-align/1mfmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.981833 /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod(22): Reading nostruct-align/1rhs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod (nostruct-align/1rhs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.070862 /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod(21): Reading nostruct-align/1aozA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod (nostruct-align/1aozA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.916868 /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod(22): Reading nostruct-align/1jl1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod (nostruct-align/1jl1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.291878 /projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod(22): Reading nostruct-align/1f8gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod (nostruct-align/1f8gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.928839 /projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod(21): Reading nostruct-align/1jjsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10803/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod (nostruct-align/1jjsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.637846 /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod(21): Reading nostruct-align/1cvl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-32305/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod (nostruct-align/1cvl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.111845 /projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod(21): Reading nostruct-align/2cmkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod (nostruct-align/2cmkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.825863 /projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod(21): Reading nostruct-align/1hyqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod (nostruct-align/1hyqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.736830 /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod(21): Reading nostruct-align/1awcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod (nostruct-align/1awcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.681856 /projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod(21): Reading nostruct-align/1awcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-29607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod (nostruct-align/1awcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.658850 /projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod(22): Reading nostruct-align/1g4mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod (nostruct-align/1g4mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.460880 /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod(22): Reading nostruct-align/1k55A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod (nostruct-align/1k55A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.958857 /projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod(21): Reading nostruct-align/1hcuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-7998/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod (nostruct-align/1hcuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.442839 /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod(21): Reading nostruct-align/1ft1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod (nostruct-align/1ft1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.862858 /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod(21): Reading nostruct-align/1ft1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod (nostruct-align/1ft1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.912882 /projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod(21): Reading nostruct-align/1c5cH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod (nostruct-align/1c5cH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.280849 /projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod(22): Reading nostruct-align/1ia9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod (nostruct-align/1ia9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.535856 /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod(22): Reading nostruct-align/1rie.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod (nostruct-align/1rie.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.163853 /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod(22): Reading nostruct-align/1gnyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20569/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod (nostruct-align/1gnyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.888844 /projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod(21): Reading nostruct-align/1c5cL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18088/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod (nostruct-align/1c5cL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.215843 /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod(22): Reading nostruct-align/1dkuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod (nostruct-align/1dkuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.989849 /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod(21): Reading nostruct-align/1sn4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod (nostruct-align/1sn4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.434872 /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod(21): Reading nostruct-align/1slvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9640/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod (nostruct-align/1slvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.605864 /projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod(21): Reading nostruct-align/1bzsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-32767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod (nostruct-align/1bzsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.517878 /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod(22): Reading nostruct-align/1ei9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod (nostruct-align/1ei9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.161861 /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod(21): Reading nostruct-align/1ysc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod (nostruct-align/1ysc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.187874 /projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod(21): Reading nostruct-align/1e4yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-28893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod (nostruct-align/1e4yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.507889 /projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod(22): Reading nostruct-align/1bf5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod (nostruct-align/1bf5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.980867 /projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod(22): Reading nostruct-align/1b1uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13453/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod (nostruct-align/1b1uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.101871 /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod(21): Reading nostruct-align/1rip.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15021/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod (nostruct-align/1rip.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.258846 /projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod(21): Reading nostruct-align/1qg6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod (nostruct-align/1qg6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.696846 /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod(22): Reading nostruct-align/1qexA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod (nostruct-align/1qexA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.183840 /projects/compbio/experiments/models.97/pdb/1j/1jcjA/nostruct-align/1jcjA.t2k-w0.5.mod(22): Reading nostruct-align/1jcjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28265/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcjA/nostruct-align/1jcjA.t2k-w0.5.mod (nostruct-align/1jcjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcjA/nostruct-align/1jcjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.655828 /projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod(21): Reading nostruct-align/1ueaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod (nostruct-align/1ueaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.467857 /projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod(21): Reading nostruct-align/1hrhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-3688/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod (nostruct-align/1hrhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.583887 /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod(21): Reading nostruct-align/1ris.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod (nostruct-align/1ris.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.576830 /projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod(22): Reading nostruct-align/2pvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5888/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod (nostruct-align/2pvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.633854 /projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod(22): Reading nostruct-align/1innA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod (nostruct-align/1innA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.690884 /projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod(22): Reading nostruct-align/1jl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6100/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod (nostruct-align/1jl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.481853 /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod(22): Reading nostruct-align/1jjtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod (nostruct-align/1jjtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.147831 /projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod(21): Reading nostruct-align/1j7rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-26168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod (nostruct-align/1j7rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.556833 /projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod(22): Reading nostruct-align/1j90A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13773/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod (nostruct-align/1j90A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.357862 /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod(22): Reading nostruct-align/1b33N.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-9676/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod (nostruct-align/1b33N.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.340870 /projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod(22): Reading nostruct-align/1ddlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod (nostruct-align/1ddlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.729885 /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod(21): Reading nostruct-align/1semA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2255/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod (nostruct-align/1semA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.977863 /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod(21): Reading nostruct-align/1bsjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod (nostruct-align/1bsjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.895855 /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod(22): Reading nostruct-align/3cla.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod (nostruct-align/3cla.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.519836 /projects/compbio/experiments/models.97/pdb/1e/1eb0A/nostruct-align/1eb0A.t2k-w0.5.mod(22): Reading nostruct-align/1eb0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2554/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eb0A/nostruct-align/1eb0A.t2k-w0.5.mod (nostruct-align/1eb0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eb0A/nostruct-align/1eb0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.620859 /projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod(21): Reading nostruct-align/1pbiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod (nostruct-align/1pbiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.468853 /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod(21): Reading nostruct-align/1tc1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod (nostruct-align/1tc1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.067850 /projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod(21): Reading nostruct-align/1gp8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod (nostruct-align/1gp8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.336868 /projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod(22): Reading nostruct-align/1kncA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod (nostruct-align/1kncA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.333839 /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod(21): Reading nostruct-align/1copD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10679/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod (nostruct-align/1copD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.074867 /projects/compbio/experiments/models.97/pdb/1j/1jygA/nostruct-align/1jygA.t2k-w0.5.mod(22): Reading nostruct-align/1jygA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jygA/nostruct-align/1jygA.t2k-w0.5.mod (nostruct-align/1jygA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jygA/nostruct-align/1jygA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.381832 /projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod(21): Reading nostruct-align/3cln.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-14953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod (nostruct-align/3cln.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.250847 /projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod(21): Reading nostruct-align/1ytc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod (nostruct-align/1ytc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.618834 /projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod(21): Reading nostruct-align/1e68A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod (nostruct-align/1e68A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.616869 /projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod(21): Reading nostruct-align/1cx8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod (nostruct-align/1cx8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.103832 /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod(21): Reading nostruct-align/1cx8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26269/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod (nostruct-align/1cx8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.712873 /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod(21): Reading nostruct-align/1bf6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod (nostruct-align/1bf6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.566847 /projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod(21): Reading nostruct-align/1b1vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod (nostruct-align/1b1vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.300859 /projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod(21): Reading nostruct-align/1qg7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod (nostruct-align/1qg7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.025843 /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod(21): Reading nostruct-align/1qeyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod (nostruct-align/1qeyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.185856 /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod(21): Reading nostruct-align/1b34B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-25923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod (nostruct-align/1b34B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.738867 /projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod(21): Reading nostruct-align/1cxc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28034/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod (nostruct-align/1cxc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.493832 /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod(22): Reading nostruct-align/2pvbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod (nostruct-align/2pvbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.329861 /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod(21): Reading nostruct-align/1tpfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18926/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod (nostruct-align/1tpfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.001873 /projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod(21): Reading nostruct-align/1ytn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod (nostruct-align/1ytn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.752844 /projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod(22): Reading nostruct-align/1jl3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod (nostruct-align/1jl3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.091875 /projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod(22): Reading nostruct-align/1jjuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod (nostruct-align/1jjuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.470865 /projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod(22): Reading nostruct-align/1jjuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod (nostruct-align/1jjuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.945848 /projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod(22): Reading nostruct-align/1jjuC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod (nostruct-align/1jjuC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.115877 /projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod(22): Reading nostruct-align/1yts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-20920/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod (nostruct-align/1yts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.563845 /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod(22): Reading nostruct-align/1c5eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod (nostruct-align/1c5eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.070881 /projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod(21): Reading nostruct-align/1ggqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9494/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod (nostruct-align/1ggqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.295870 /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod(22): Reading nostruct-align/1vhrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod (nostruct-align/1vhrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.469852 /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod(22): Reading nostruct-align/1ytw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19164/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod (nostruct-align/1ytw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.116848 /projects/compbio/experiments/models.97/pdb/1i/1iw7E/nostruct-align/1iw7E.t2k-w0.5.mod(22): Reading nostruct-align/1iw7E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iw7E/nostruct-align/1iw7E.t2k-w0.5.mod (nostruct-align/1iw7E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iw7E/nostruct-align/1iw7E.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.017855 /projects/compbio/experiments/models.97/pdb/1l/1lqsR/nostruct-align/1lqsR.t2k-w0.5.mod(22): Reading nostruct-align/1lqsR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27115/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lqsR/nostruct-align/1lqsR.t2k-w0.5.mod (nostruct-align/1lqsR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lqsR/nostruct-align/1lqsR.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.542849 /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod(21): Reading nostruct-align/32c2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod (nostruct-align/32c2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.899858 /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod(21): Reading nostruct-align/1kal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-20761/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod (nostruct-align/1kal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.285887 /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod(21): Reading nostruct-align/1rkd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15548/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod (nostruct-align/1rkd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.340836 /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod(21): Reading nostruct-align/1kao.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29046/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod (nostruct-align/1kao.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.384884 /projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod(22): Reading nostruct-align/1dm5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12385/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod (nostruct-align/1dm5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.614874 /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod(21): Reading nostruct-align/6pfkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18735/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod (nostruct-align/6pfkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.077852 /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod(22): Reading nostruct-align/1ahsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1744/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod (nostruct-align/1ahsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.248877 /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod(21): Reading nostruct-align/1kas.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-20529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod (nostruct-align/1kas.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.399868 /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod(22): Reading nostruct-align/1jyhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod (nostruct-align/1jyhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.326874 /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod(21): Reading nostruct-align/1yua.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod (nostruct-align/1yua.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.291882 /projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod(21): Reading nostruct-align/1e69B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11108/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod (nostruct-align/1e69B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.246881 /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod(21): Reading nostruct-align/1bdyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod (nostruct-align/1bdyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.635881 /projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod(22): Reading nostruct-align/1i4dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod (nostruct-align/1i4dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.434881 /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod(22): Reading nostruct-align/1b35A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-7964/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod (nostruct-align/1b35A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.088854 /projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod(21): Reading nostruct-align/1yuf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-18293/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod (nostruct-align/1yuf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.148888 /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod(22): Reading nostruct-align/1qg8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod (nostruct-align/1qg8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.503860 /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod(22): Reading nostruct-align/1b35B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod (nostruct-align/1b35B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.670885 /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod(21): Reading nostruct-align/1kay.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-4274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod (nostruct-align/1kay.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.672853 /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod(22): Reading nostruct-align/1b35C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17095/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod (nostruct-align/1b35C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.276846 /projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod(22): Reading nostruct-align/1jclA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod (nostruct-align/1jclA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.880833 /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod(21): Reading nostruct-align/3cms.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-15174/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod (nostruct-align/3cms.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.200874 /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod(22): Reading nostruct-align/1b35D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22244/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod (nostruct-align/1b35D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.655878 /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod(21): Reading nostruct-align/1cyi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-8209/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod (nostruct-align/1cyi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.437838 /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod(21): Reading nostruct-align/1cyj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26287/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod (nostruct-align/1cyj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.636837 /projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod(22): Reading nostruct-align/1jjvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod (nostruct-align/1jjvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.041862 /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod(22): Reading nostruct-align/1cyo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28518/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod (nostruct-align/1cyo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.803839 /projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod(21): Reading nostruct-align/1ddnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-14085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod (nostruct-align/1ddnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.232862 /projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod(22): Reading nostruct-align/1hcxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20971/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod (nostruct-align/1hcxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.599871 /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod(21): Reading nostruct-align/1mucA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27089/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod (nostruct-align/1mucA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.474852 /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod(21): Reading nostruct-align/2afpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27288/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod (nostruct-align/2afpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.505863 /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod(21): Reading nostruct-align/1frvB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod (nostruct-align/1frvB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864830 /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod(22): Reading nostruct-align/2bbvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod (nostruct-align/2bbvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.785881 /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod(22): Reading nostruct-align/1tc3C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod (nostruct-align/1tc3C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.789837 /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod(21): Reading nostruct-align/1tph1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-20669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod (nostruct-align/1tph1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.743841 /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod(21): Reading nostruct-align/1cyx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod (nostruct-align/1cyx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.826838 /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod(21): Reading nostruct-align/2bbvC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-28663/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod (nostruct-align/2bbvC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.863840 /projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod(21): Reading nostruct-align/1dkxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-27030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod (nostruct-align/1dkxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.264830 /projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod(21): Reading nostruct-align/1qg9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod (nostruct-align/1qg9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.140856 /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod(21): Reading nostruct-align/1ahtH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod (nostruct-align/1ahtH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.344833 /projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod(21): Reading nostruct-align/1hrkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25845/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod (nostruct-align/1hrkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.053843 /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod(22): Reading nostruct-align/1rlr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod (nostruct-align/1rlr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.983829 /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod(21): Reading nostruct-align/1ahtL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod (nostruct-align/1ahtL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.651861 /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod(22): Reading nostruct-align/1ka1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-21354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod (nostruct-align/1ka1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.604832 /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod(21): Reading nostruct-align/1rlw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2092/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod (nostruct-align/1rlw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.270870 /projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod(21): Reading nostruct-align/1czj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod (nostruct-align/1czj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.742832 /projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod(22): Reading nostruct-align/1fkmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod (nostruct-align/1fkmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.237835 /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod(22): Reading nostruct-align/1dzkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-32734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod (nostruct-align/1dzkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.417862 /projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod(21): Reading nostruct-align/1jl5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14976/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod (nostruct-align/1jl5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -36.355850 /projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod(21): Reading nostruct-align/1hyuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-26734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod (nostruct-align/1hyuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.494846 /projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod(22): Reading nostruct-align/1k59A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod (nostruct-align/1k59A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.684843 /projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod(21): Reading nostruct-align/1bsmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod (nostruct-align/1bsmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.781868 /projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod(21): Reading nostruct-align/1he7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod (nostruct-align/1he7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.156862 /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod(22): Reading nostruct-align/1qtnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11934/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod (nostruct-align/1qtnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.826866 /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod(22): Reading nostruct-align/1ft5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod (nostruct-align/1ft5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.767878 /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod(22): Reading nostruct-align/1qtnB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod (nostruct-align/1qtnB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.759850 /projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod(21): Reading nostruct-align/1cosA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-14651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod (nostruct-align/1cosA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.729832 /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod(22): Reading nostruct-align/1rmd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-3027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod (nostruct-align/1rmd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.675871 /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod(21): Reading nostruct-align/1rmg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24392/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod (nostruct-align/1rmg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.012831 /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod(21): Reading nostruct-align/1rmi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod (nostruct-align/1rmi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.059837 /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod(22): Reading nostruct-align/1d8wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod (nostruct-align/1d8wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.535864 /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod(21): Reading nostruct-align/1hkbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod (nostruct-align/1hkbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.611853 /projects/compbio/experiments/models.97/pdb/1l/1l7jB/nostruct-align/1l7jB.t2k-w0.5.mod(22): Reading nostruct-align/1l7jB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7jB/nostruct-align/1l7jB.t2k-w0.5.mod (nostruct-align/1l7jB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l7jB/nostruct-align/1l7jB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.596828 /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k-w0.5.mod(22): Reading nostruct-align/1gvfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-12149/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k-w0.5.mod (nostruct-align/1gvfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.736853 /projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod(22): Reading nostruct-align/1i4fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod (nostruct-align/1i4fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.719833 /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod(22): Reading nostruct-align/1kcw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod (nostruct-align/1kcw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.966887 /projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod(21): Reading nostruct-align/1i4fB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24978/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod (nostruct-align/1i4fB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.901834 /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod(21): Reading nostruct-align/1b37B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-6026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod (nostruct-align/1b37B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.360863 /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod(21): Reading nostruct-align/1dsbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod (nostruct-align/1dsbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.835844 /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k-w0.5.mod(22): Reading nostruct-align/1lqvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k-w0.5.mod (nostruct-align/1lqvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.993849 /projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod(21): Reading nostruct-align/1rms.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod (nostruct-align/1rms.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.914860 /projects/compbio/experiments/models.97/pdb/1l/1lqvC/nostruct-align/1lqvC.t2k-w0.5.mod(22): Reading nostruct-align/1lqvC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lqvC/nostruct-align/1lqvC.t2k-w0.5.mod (nostruct-align/1lqvC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lqvC/nostruct-align/1lqvC.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.584843 /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod(21): Reading nostruct-align/3cox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2524/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod (nostruct-align/3cox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.770830 /projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod(22): Reading nostruct-align/1qmeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4030/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod (nostruct-align/1qmeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.407858 /projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod(21): Reading nostruct-align/1fknA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21979/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod (nostruct-align/1fknA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.278837 /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod(21): Reading nostruct-align/1dzlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-32641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod (nostruct-align/1dzlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.669888 /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod(22): Reading nostruct-align/1hyvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30166/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod (nostruct-align/1hyvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.561867 /projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod(22): Reading nostruct-align/1g60A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod (nostruct-align/1g60A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.413834 /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod(21): Reading nostruct-align/1ggtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7399/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod (nostruct-align/1ggtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.234838 /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod(21): Reading nostruct-align/1ofgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod (nostruct-align/1ofgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.484880 /projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod(21): Reading nostruct-align/1d1nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-26595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod (nostruct-align/1d1nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.043831 /projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod(22): Reading nostruct-align/1qtoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod (nostruct-align/1qtoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.527842 /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod(21): Reading nostruct-align/1kdj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod (nostruct-align/1kdj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.454861 /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod(21): Reading nostruct-align/1lccA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12460/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod (nostruct-align/1lccA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.452856 /projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod(22): Reading nostruct-align/1jraA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-18139/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod (nostruct-align/1jraA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.409834 /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod(21): Reading nostruct-align/1rnd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31599/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod (nostruct-align/1rnd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.488853 /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k-w0.5.mod(22): Reading nostruct-align/1kngA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30330/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k-w0.5.mod (nostruct-align/1kngA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.899851 /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod(22): Reading nostruct-align/1dkzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod (nostruct-align/1dkzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.156860 /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod(21): Reading nostruct-align/1hkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod (nostruct-align/1hkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.631886 /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod(21): Reading nostruct-align/1fzaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12085/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod (nostruct-align/1fzaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.041880 /projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod(22): Reading nostruct-align/1j7vR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28768/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod (nostruct-align/1j7vR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.547850 /projects/compbio/experiments/models.97/pdb/1k/1kdu/nostruct-align/1kdu.t2k-w0.5.mod(22): Reading nostruct-align/1kdu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdu/nostruct-align/1kdu.t2k-w0.5.mod (nostruct-align/1kdu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kdu/nostruct-align/1kdu.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.869886 /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod(22): Reading nostruct-align/1jykA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod (nostruct-align/1jykA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.658867 /projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod(22): Reading nostruct-align/1h8aC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14117/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod (nostruct-align/1h8aC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.250841 /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod(21): Reading nostruct-align/2tnfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31595/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod (nostruct-align/2tnfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.626852 /projects/compbio/experiments/models.97/pdb/1k/1ka3A/nostruct-align/1ka3A.t2k-w0.5.mod(22): Reading nostruct-align/1ka3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32161/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ka3A/nostruct-align/1ka3A.t2k-w0.5.mod (nostruct-align/1ka3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ka3A/nostruct-align/1ka3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.720884 /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod(21): Reading nostruct-align/2msbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod (nostruct-align/2msbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.532879 /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod(21): Reading nostruct-align/2msbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-5411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod (nostruct-align/2msbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.595860 /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod(22): Reading nostruct-align/1f8mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12569/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod (nostruct-align/1f8mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.408861 /projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod(21): Reading nostruct-align/1jjyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2009/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod (nostruct-align/1jjyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.702883 /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod(21): Reading nostruct-align/1chkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12095/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod (nostruct-align/1chkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.176886 /projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod(21): Reading nostruct-align/1hywA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod (nostruct-align/1hywA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.529860 /projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod(21): Reading nostruct-align/1j95A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod (nostruct-align/1j95A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.381882 /projects/compbio/experiments/models.97/pdb/1g/1gguA/nostruct-align/1gguA.t2k-w0.5.mod(22): Reading nostruct-align/1gguA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-19866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gguA/nostruct-align/1gguA.t2k-w0.5.mod (nostruct-align/1gguA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gguA/nostruct-align/1gguA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.259869 /projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod(22): Reading nostruct-align/1evsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod (nostruct-align/1evsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.724846 /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod(22): Reading nostruct-align/1ex1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14972/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod (nostruct-align/1ex1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.676828 /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod(22): Reading nostruct-align/1g61A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod (nostruct-align/1g61A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.033855 /projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod(21): Reading nostruct-align/1lcdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10147/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod (nostruct-align/1lcdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.452856 /projects/compbio/experiments/models.97/pdb/1l/1l0bA/nostruct-align/1l0bA.t2k-w0.5.mod(22): Reading nostruct-align/1l0bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-27131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0bA/nostruct-align/1l0bA.t2k-w0.5.mod (nostruct-align/1l0bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l0bA/nostruct-align/1l0bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.814877 /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod(21): Reading nostruct-align/1taxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod (nostruct-align/1taxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.490873 /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod(22): Reading nostruct-align/1cq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2501/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod (nostruct-align/1cq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.713850 /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod(22): Reading nostruct-align/1dm9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod (nostruct-align/1dm9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.962875 /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod(21): Reading nostruct-align/1bzyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod (nostruct-align/1bzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.671856 /projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod(21): Reading nostruct-align/1h8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-16616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod (nostruct-align/1h8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.270863 /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod(22): Reading nostruct-align/1a73A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod (nostruct-align/1a73A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.268888 /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod(21): Reading nostruct-align/1rom.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-9592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod (nostruct-align/1rom.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.678856 /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod(21): Reading nostruct-align/1ron.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod (nostruct-align/1ron.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.636833 /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod(21): Reading nostruct-align/1roo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod (nostruct-align/1roo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.791857 /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod(21): Reading nostruct-align/1hrnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-3488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod (nostruct-align/1hrnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.658836 /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod(22): Reading nostruct-align/3ygsP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30967/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod (nostruct-align/3ygsP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.056835 /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod(22): Reading nostruct-align/1qmgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod (nostruct-align/1qmgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.364841 /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod(21): Reading nostruct-align/1b9dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod (nostruct-align/1b9dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.359854 /projects/compbio/experiments/models.97/pdb/1j/1j96A/nostruct-align/1j96A.t2k-w0.5.mod(22): Reading nostruct-align/1j96A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21087/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j96A/nostruct-align/1j96A.t2k-w0.5.mod (nostruct-align/1j96A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j96A/nostruct-align/1j96A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.400833 /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod(22): Reading nostruct-align/1j7xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod (nostruct-align/1j7xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.892879 /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod(21): Reading nostruct-align/3crxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod (nostruct-align/3crxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.736847 /projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod(22): Reading nostruct-align/1ex2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1934/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod (nostruct-align/1ex2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.997845 /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod(21): Reading nostruct-align/1sesA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31337/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod (nostruct-align/1sesA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.809855 /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod(22): Reading nostruct-align/1mugA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod (nostruct-align/1mugA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.110872 /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod(21): Reading nostruct-align/1rpa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10431/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod (nostruct-align/1rpa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.383879 /projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod(21): Reading nostruct-align/1qtqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod (nostruct-align/1qtqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.313868 /projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod(21): Reading nostruct-align/1hyxH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod (nostruct-align/1hyxH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.929838 /projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod(21): Reading nostruct-align/1rpb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-29718/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod (nostruct-align/1rpb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.085886 /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod(22): Reading nostruct-align/1eb6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16129/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod (nostruct-align/1eb6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.044867 /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod(21): Reading nostruct-align/3crd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod (nostruct-align/3crd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.885849 /projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod(22): Reading nostruct-align/1cq4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod (nostruct-align/1cq4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.568836 /projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod(21): Reading nostruct-align/1ft8E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod (nostruct-align/1ft8E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.884876 /projects/compbio/experiments/models.97/pdb/1l/1ljoA/nostruct-align/1ljoA.t2k-w0.5.mod(22): Reading nostruct-align/1ljoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-1203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ljoA/nostruct-align/1ljoA.t2k-w0.5.mod (nostruct-align/1ljoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ljoA/nostruct-align/1ljoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.439863 /projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod(21): Reading nostruct-align/1ahxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8182/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod (nostruct-align/1ahxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.803873 /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod(22): Reading nostruct-align/1fzcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod (nostruct-align/1fzcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.635851 /projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod(21): Reading nostruct-align/1h8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod (nostruct-align/1h8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.126881 /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod(22): Reading nostruct-align/1l7mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31498/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod (nostruct-align/1l7mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.442858 /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod(21): Reading nostruct-align/1rpl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-29634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod (nostruct-align/1rpl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.272852 /projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod(21): Reading nostruct-align/1ehaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-23487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod (nostruct-align/1ehaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.990875 /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod(21): Reading nostruct-align/1rpo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod (nostruct-align/1rpo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.997849 /projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod(22): Reading nostruct-align/1jcqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4316/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod (nostruct-align/1jcqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.677834 /projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod(22): Reading nostruct-align/1dseA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod (nostruct-align/1dseA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.109886 /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod(22): Reading nostruct-align/1f1eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11304/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod (nostruct-align/1f1eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.042887 /projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod(21): Reading nostruct-align/2gn5.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod (nostruct-align/2gn5.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.269852 /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod(21): Reading nostruct-align/1u2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod (nostruct-align/1u2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.984882 /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod(22): Reading nostruct-align/1eokA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod (nostruct-align/1eokA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.166868 /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod(21): Reading nostruct-align/1tplA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod (nostruct-align/1tplA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.413839 /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod(22): Reading nostruct-align/2scpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod (nostruct-align/2scpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.421854 /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod(22): Reading nostruct-align/1qmhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod (nostruct-align/1qmhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.717873 /projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod(21): Reading nostruct-align/1fkqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod (nostruct-align/1fkqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.325880 /projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod(22): Reading nostruct-align/1dzoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod (nostruct-align/1dzoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.903860 /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod(22): Reading nostruct-align/1stfI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18986/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod (nostruct-align/1stfI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.914860 /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod(21): Reading nostruct-align/1chmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod (nostruct-align/1chmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.686855 /projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod(22): Reading nostruct-align/1j97A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod (nostruct-align/1j97A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.214872 /projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod(21): Reading nostruct-align/1ggwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25363/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod (nostruct-align/1ggwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.911867 /projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod(21): Reading nostruct-align/1lybA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod (nostruct-align/1lybA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.561878 /projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod(22): Reading nostruct-align/1evuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod (nostruct-align/1evuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.417835 /projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod(21): Reading nostruct-align/1g63A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod (nostruct-align/1g63A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.582842 /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod(22): Reading nostruct-align/1d1qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30598/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod (nostruct-align/1d1qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.003887 /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod(21): Reading nostruct-align/1qtrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod (nostruct-align/1qtrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.671846 /projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod(21): Reading nostruct-align/1ft9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-5352/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod (nostruct-align/1ft9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.447866 /projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod(22): Reading nostruct-align/1eb7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod (nostruct-align/1eb7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.995880 /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading nostruct-align/1rpxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.485867 /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod(21): Reading nostruct-align/1a75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod (nostruct-align/1a75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.794865 /projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod(21): Reading nostruct-align/1g4uS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14779/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod (nostruct-align/1g4uS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.673885 /projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod(22): Reading nostruct-align/1jcrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23291/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod (nostruct-align/1jcrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.257872 /projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod(21): Reading nostruct-align/1h8dH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod (nostruct-align/1h8dH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.009872 /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod(22): Reading nostruct-align/1je0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod (nostruct-align/1je0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.106882 /projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod(22): Reading nostruct-align/1jcrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod (nostruct-align/1jcrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.956886 /projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod(21): Reading nostruct-align/1vaoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod (nostruct-align/1vaoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.419828 /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod(21): Reading nostruct-align/2pviA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-22924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod (nostruct-align/2pviA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.765852 /projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod(22): Reading nostruct-align/1h8dL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod (nostruct-align/1h8dL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.648876 /projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod(21): Reading nostruct-align/1f8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod (nostruct-align/1f8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.624878 /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod(22): Reading nostruct-align/1fm0D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod (nostruct-align/1fm0D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.597832 /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod(22): Reading nostruct-align/1j98A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3711/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod (nostruct-align/1j98A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.818846 /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t2k-w0.5.mod(22): Reading nostruct-align/1lycA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-32411/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t2k-w0.5.mod (nostruct-align/1lycA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.041828 /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod(22): Reading nostruct-align/1fm0E.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28455/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod (nostruct-align/1fm0E.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.969849 /projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod(21): Reading nostruct-align/1ggxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod (nostruct-align/1ggxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.645840 /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod(21): Reading nostruct-align/1d1rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7362/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod (nostruct-align/1d1rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.689827 /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod(22): Reading nostruct-align/1qtsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod (nostruct-align/1qtsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.095844 /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod(21): Reading nostruct-align/1aapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod (nostruct-align/1aapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.909847 /projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod(21): Reading nostruct-align/1c5lH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod (nostruct-align/1c5lH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.107885 /projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod(21): Reading nostruct-align/1c5lL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod (nostruct-align/1c5lL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.040833 /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod(21): Reading nostruct-align/1aj8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod (nostruct-align/1aj8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.564884 /projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod(22): Reading nostruct-align/1h8eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod (nostruct-align/1h8eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.960857 /projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod(22): Reading nostruct-align/1jyoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod (nostruct-align/1jyoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.439877 /projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod(22): Reading nostruct-align/1h8eD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22814/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod (nostruct-align/1h8eD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.887882 /projects/compbio/experiments/models.97/pdb/1k/1kuuA/nostruct-align/1kuuA.t2k-w0.5.mod(22): Reading nostruct-align/1kuuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kuuA/nostruct-align/1kuuA.t2k-w0.5.mod (nostruct-align/1kuuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kuuA/nostruct-align/1kuuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.201845 /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod(21): Reading nostruct-align/1rro.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3404/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod (nostruct-align/1rro.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.964869 /projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod(22): Reading nostruct-align/1h8eG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23880/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod (nostruct-align/1h8eG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.506886 /projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod(22): Reading nostruct-align/1jyoE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8397/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod (nostruct-align/1jyoE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.864847 /projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod(22): Reading nostruct-align/1h8eH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8614/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod (nostruct-align/1h8eH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.048883 /projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod(22): Reading nostruct-align/1h8eI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod (nostruct-align/1h8eI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.038887 /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod(21): Reading nostruct-align/1vapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-30236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod (nostruct-align/1vapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.476864 /projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod(21): Reading nostruct-align/1b9gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod (nostruct-align/1b9gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.253870 /projects/compbio/experiments/models.97/pdb/1j/1j99A/nostruct-align/1j99A.t2k-w0.5.mod(22): Reading nostruct-align/1j99A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j99A/nostruct-align/1j99A.t2k-w0.5.mod (nostruct-align/1j99A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j99A/nostruct-align/1j99A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.614849 /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod(22): Reading nostruct-align/1kid.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod (nostruct-align/1kid.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.728857 /projects/compbio/experiments/models.97/pdb/1k/1kgbA/nostruct-align/1kgbA.t2k-w0.5.mod(22): Reading nostruct-align/1kgbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgbA/nostruct-align/1kgbA.t2k-w0.5.mod (nostruct-align/1kgbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kgbA/nostruct-align/1kgbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.615828 /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod(21): Reading nostruct-align/4gcr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-478/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod (nostruct-align/4gcr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.435886 /projects/compbio/experiments/models.97/pdb/1j/1jrfA/nostruct-align/1jrfA.t2k-w0.5.mod(22): Reading nostruct-align/1jrfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrfA/nostruct-align/1jrfA.t2k-w0.5.mod (nostruct-align/1jrfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrfA/nostruct-align/1jrfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.831869 /projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod(21): Reading nostruct-align/1g65K.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod (nostruct-align/1g65K.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.467871 /projects/compbio/experiments/models.97/pdb/1l/1ll0A/nostruct-align/1ll0A.t2k-w0.5.mod(22): Reading nostruct-align/1ll0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ll0A/nostruct-align/1ll0A.t2k-w0.5.mod (nostruct-align/1ll0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ll0A/nostruct-align/1ll0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.456829 /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod(21): Reading nostruct-align/1ljrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod (nostruct-align/1ljrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.526831 /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod(22): Reading nostruct-align/1kit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28549/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod (nostruct-align/1kit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.311834 /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod(22): Reading nostruct-align/1ignA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod (nostruct-align/1ignA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.763845 /projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod(21): Reading nostruct-align/1g4wR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-19985/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod (nostruct-align/1g4wR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.582886 /projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod(21): Reading nostruct-align/1i4lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-9500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod (nostruct-align/1i4lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.941830 /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k-w0.5.mod(22): Reading nostruct-align/1kw4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-4000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k-w0.5.mod (nostruct-align/1kw4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.483868 /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod(22): Reading nostruct-align/1rss.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30546/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod (nostruct-align/1rss.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.475840 /projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod(22): Reading nostruct-align/1ka8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod (nostruct-align/1ka8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.958834 /projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod(22): Reading nostruct-align/1eonA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod (nostruct-align/1eonA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.572828 /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod(22): Reading nostruct-align/1b9hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod (nostruct-align/1b9hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.466829 /projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod(22): Reading nostruct-align/1fm2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod (nostruct-align/1fm2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.062836 /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod(22): Reading nostruct-align/1rsy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod (nostruct-align/1rsy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.076868 /projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod(22): Reading nostruct-align/1fm2B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-30415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod (nostruct-align/1fm2B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.412867 /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod(21): Reading nostruct-align/1dzrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod (nostruct-align/1dzrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.900854 /projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod(21): Reading nostruct-align/1f8rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod (nostruct-align/1f8rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.474833 /projects/compbio/experiments/models.97/pdb/1g/1ggzA/nostruct-align/1ggzA.t2k-w0.5.mod(22): Reading nostruct-align/1ggzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggzA/nostruct-align/1ggzA.t2k-w0.5.mod (nostruct-align/1ggzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ggzA/nostruct-align/1ggzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.096828 /projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod(21): Reading nostruct-align/1evxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod (nostruct-align/1evxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.174862 /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod(22): Reading nostruct-align/1g66A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod (nostruct-align/1g66A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.420864 /projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod(22): Reading nostruct-align/1ddvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod (nostruct-align/1ddvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.943880 /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod(22): Reading nostruct-align/1df4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod (nostruct-align/1df4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.409866 /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod(21): Reading nostruct-align/1bu2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26634/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod (nostruct-align/1bu2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.146883 /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod(21): Reading nostruct-align/1cozA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod (nostruct-align/1cozA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.704847 /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k-w0.5.mod(22): Reading nostruct-align/1knmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k-w0.5.mod (nostruct-align/1knmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.230831 /projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod(22): Reading nostruct-align/1h8gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26313/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod (nostruct-align/1h8gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.017847 /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod(21): Reading nostruct-align/1kjs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod (nostruct-align/1kjs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.731867 /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod(21): Reading nostruct-align/1a78A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-13298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod (nostruct-align/1a78A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.050852 /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod(21): Reading nostruct-align/2gpr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod (nostruct-align/2gpr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.459871 /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod(21): Reading nostruct-align/1fzgD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod (nostruct-align/1fzgD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.245850 /projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod(22): Reading nostruct-align/1i4mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod (nostruct-align/1i4mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.062845 /projects/compbio/experiments/models.97/pdb/1j/1je3A/nostruct-align/1je3A.t2k-w0.5.mod(22): Reading nostruct-align/1je3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1je3A/nostruct-align/1je3A.t2k-w0.5.mod (nostruct-align/1je3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1je3A/nostruct-align/1je3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.350872 /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod(21): Reading nostruct-align/1dad.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod (nostruct-align/1dad.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.716881 /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod(21): Reading nostruct-align/1pd21.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod (nostruct-align/1pd21.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.934858 /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod(22): Reading nostruct-align/1rtu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod (nostruct-align/1rtu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.232882 /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod(22): Reading nostruct-align/1kgdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod (nostruct-align/1kgdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.161844 /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod(22): Reading nostruct-align/1evyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17471/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod (nostruct-align/1evyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.170872 /projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod(22): Reading nostruct-align/1ex7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod (nostruct-align/1ex7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.853842 /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod(22): Reading nostruct-align/1ddwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod (nostruct-align/1ddwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.689873 /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod(22): Reading nostruct-align/1g4yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod (nostruct-align/1g4yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.897884 /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod(21): Reading nostruct-align/1dar.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod (nostruct-align/1dar.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.336882 /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod(21): Reading nostruct-align/1dat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1636/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod (nostruct-align/1dat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.591835 /projects/compbio/experiments/models.97/pdb/1d/1dax/nostruct-align/1dax.t2k-w0.5.mod(22): Reading nostruct-align/1dax.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dax/nostruct-align/1dax.t2k-w0.5.mod (nostruct-align/1dax.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dax/nostruct-align/1dax.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.053886 /projects/compbio/experiments/models.97/pdb/1l/1ll2A/nostruct-align/1ll2A.t2k-w0.5.mod(22): Reading nostruct-align/1ll2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15795/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ll2A/nostruct-align/1ll2A.t2k-w0.5.mod (nostruct-align/1ll2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ll2A/nostruct-align/1ll2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.961878 /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod(21): Reading nostruct-align/1jrhI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19754/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod (nostruct-align/1jrhI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.407871 /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod(22): Reading nostruct-align/1jyrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21788/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod (nostruct-align/1jyrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.726862 /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod(22): Reading nostruct-align/1a79A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-12335/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod (nostruct-align/1a79A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.018835 /projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod(22): Reading nostruct-align/1e5dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod (nostruct-align/1e5dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.578863 /projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod(22): Reading nostruct-align/1g4yR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod (nostruct-align/1g4yR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.512869 /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod(22): Reading nostruct-align/1bebA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28486/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod (nostruct-align/1bebA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.071846 /projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod(21): Reading nostruct-align/1qfcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod (nostruct-align/1qfcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.157846 /projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod(21): Reading nostruct-align/1vasA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod (nostruct-align/1vasA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.946848 /projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod(21): Reading nostruct-align/1fdlH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod (nostruct-align/1fdlH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.111877 /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod(22): Reading nostruct-align/2scuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod (nostruct-align/2scuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.861845 /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod(21): Reading nostruct-align/2scuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod (nostruct-align/2scuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.356869 /projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod(21): Reading nostruct-align/2hppP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod (nostruct-align/2hppP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.236851 /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod(21): Reading nostruct-align/1chrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-12331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod (nostruct-align/1chrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.136831 /projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod(21): Reading nostruct-align/1d1vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-23270/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod (nostruct-align/1d1vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.050835 /projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod(21): Reading nostruct-align/1bsvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod (nostruct-align/1bsvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.530840 /projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod(22): Reading nostruct-align/1k4cC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16674/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod (nostruct-align/1k4cC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.761881 /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod(22): Reading nostruct-align/1qtwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5042/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod (nostruct-align/1qtwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.831879 /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod(21): Reading nostruct-align/1dbs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod (nostruct-align/1dbs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.697851 /projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod(21): Reading nostruct-align/1lckA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod (nostruct-align/1lckA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.310865 /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod(22): Reading nostruct-align/2cuaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod (nostruct-align/2cuaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.274851 /projects/compbio/experiments/models.97/pdb/1g/1goeA/nostruct-align/1goeA.t2k-w0.5.mod(22): Reading nostruct-align/1goeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1goeA/nostruct-align/1goeA.t2k-w0.5.mod (nostruct-align/1goeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1goeA/nostruct-align/1goeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.075861 /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod(21): Reading nostruct-align/1vpfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-8693/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod (nostruct-align/1vpfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.091887 /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod(22): Reading nostruct-align/1klo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30781/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod (nostruct-align/1klo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.862860 /projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod(21): Reading nostruct-align/1klt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-30587/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod (nostruct-align/1klt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.724886 /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod(22): Reading nostruct-align/1igqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod (nostruct-align/1igqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.499847 /projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod(22): Reading nostruct-align/1e5eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-21592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod (nostruct-align/1e5eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.004839 /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod(21): Reading nostruct-align/1qfdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5786/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod (nostruct-align/1qfdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.619877 /projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod(22): Reading nostruct-align/1je5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3253/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod (nostruct-align/1je5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.324837 /projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod(22): Reading nostruct-align/1hruA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod (nostruct-align/1hruA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.947844 /projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod(21): Reading nostruct-align/1ip9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-8681/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod (nostruct-align/1ip9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.934828 /projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod(21): Reading nostruct-align/1b9kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-24975/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod (nostruct-align/1b9kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.995857 /projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod(21): Reading nostruct-align/1fm5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod (nostruct-align/1fm5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.777847 /projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod(21): Reading nostruct-align/1awqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13189/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod (nostruct-align/1awqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.393854 /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod(22): Reading nostruct-align/2i1b.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3716/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod (nostruct-align/2i1b.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.236883 /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod(21): Reading nostruct-align/1df7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-32218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod (nostruct-align/1df7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.786879 /projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod(22): Reading nostruct-align/3uagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21611/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod (nostruct-align/3uagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.927887 /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod(21): Reading nostruct-align/1bu5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod (nostruct-align/1bu5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.168840 /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod(22): Reading nostruct-align/1dcs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod (nostruct-align/1dcs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.230858 /projects/compbio/experiments/models.97/pdb/1j/1jrjA/nostruct-align/1jrjA.t2k-w0.5.mod(22): Reading nostruct-align/1jrjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5666/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrjA/nostruct-align/1jrjA.t2k-w0.5.mod (nostruct-align/1jrjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrjA/nostruct-align/1jrjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.123888 /projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod(21): Reading nostruct-align/3ertA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-22480/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod (nostruct-align/3ertA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.084871 /projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod(21): Reading nostruct-align/2gsq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod (nostruct-align/2gsq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.773832 /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod(22): Reading nostruct-align/1igrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod (nostruct-align/1igrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.277857 /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod(22): Reading nostruct-align/1tiiC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod (nostruct-align/1tiiC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.055834 /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod(22): Reading nostruct-align/1tiiD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod (nostruct-align/1tiiD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.880836 /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod(22): Reading nostruct-align/1qfeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod (nostruct-align/1qfeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.051851 /projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod(22): Reading nostruct-align/1jcxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod (nostruct-align/1jcxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.135845 /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod(22): Reading nostruct-align/3cyr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21683/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod (nostruct-align/3cyr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.833849 /projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod(21): Reading nostruct-align/2fbjL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14379/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod (nostruct-align/2fbjL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.327868 /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod(22): Reading nostruct-align/1stmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod (nostruct-align/1stmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.830875 /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod(21): Reading nostruct-align/1ddf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9907/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod (nostruct-align/1ddf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.519863 /projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod(21): Reading nostruct-align/1tr1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod (nostruct-align/1tr1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.319851 /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod(21): Reading nostruct-align/1b9lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod (nostruct-align/1b9lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.188864 /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod(21): Reading nostruct-align/1knb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod (nostruct-align/1knb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.464878 /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod(21): Reading nostruct-align/1ddzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod (nostruct-align/1ddzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.812862 /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod(21): Reading nostruct-align/1hdcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-11737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod (nostruct-align/1hdcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.732830 /projects/compbio/experiments/models.97/pdb/1j/1jrkA/nostruct-align/1jrkA.t2k-w0.5.mod(22): Reading nostruct-align/1jrkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2660/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrkA/nostruct-align/1jrkA.t2k-w0.5.mod (nostruct-align/1jrkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrkA/nostruct-align/1jrkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.677885 /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod(21): Reading nostruct-align/1ddt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19091/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod (nostruct-align/1ddt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.474838 /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod(21): Reading nostruct-align/1pbwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod (nostruct-align/1pbwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.899876 /projects/compbio/experiments/models.97/pdb/1k/1knqA/nostruct-align/1knqA.t2k-w0.5.mod(22): Reading nostruct-align/1knqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-23002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knqA/nostruct-align/1knqA.t2k-w0.5.mod (nostruct-align/1knqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knqA/nostruct-align/1knqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.441835 /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod(22): Reading nostruct-align/1a02F.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod (nostruct-align/1a02F.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.384888 /projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod(22): Reading nostruct-align/1fzkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9319/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod (nostruct-align/1fzkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.075850 /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod(21): Reading nostruct-align/1a02J.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18124/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod (nostruct-align/1a02J.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.731878 /projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod(22): Reading nostruct-align/1fzkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26959/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod (nostruct-align/1fzkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.945852 /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod(21): Reading nostruct-align/1knt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14253/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod (nostruct-align/1knt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.952873 /projects/compbio/experiments/models.97/pdb/1l/1l7uA/nostruct-align/1l7uA.t2k-w0.5.mod(22): Reading nostruct-align/1l7uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7uA/nostruct-align/1l7uA.t2k-w0.5.mod (nostruct-align/1l7uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l7uA/nostruct-align/1l7uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.772886 /projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod(22): Reading nostruct-align/1ehiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod (nostruct-align/1ehiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.343861 /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod(21): Reading nostruct-align/1zac.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30046/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod (nostruct-align/1zac.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.731865 /projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod(21): Reading nostruct-align/1e5gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21917/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod (nostruct-align/1e5gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.831835 /projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod(22): Reading nostruct-align/1bu6O.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7174/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod (nostruct-align/1bu6O.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.908833 /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod(22): Reading nostruct-align/1a02N.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod (nostruct-align/1a02N.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.084887 /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod(22): Reading nostruct-align/1f1mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod (nostruct-align/1f1mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.300858 /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod(21): Reading nostruct-align/1dec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod (nostruct-align/1dec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.958845 /projects/compbio/experiments/models.97/pdb/1e/1eq1A/nostruct-align/1eq1A.t2k-w0.5.mod(22): Reading nostruct-align/1eq1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-23054/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq1A/nostruct-align/1eq1A.t2k-w0.5.mod (nostruct-align/1eq1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq1A/nostruct-align/1eq1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.005863 /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod(21): Reading nostruct-align/2vgh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod (nostruct-align/2vgh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.312876 /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod(21): Reading nostruct-align/1def.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod (nostruct-align/1def.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.004839 /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod(22): Reading nostruct-align/1b9mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11353/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod (nostruct-align/1b9mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.383871 /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod(22): Reading nostruct-align/1qmpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-10839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod (nostruct-align/1qmpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.865870 /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod(21): Reading nostruct-align/1zaq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25418/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod (nostruct-align/1zaq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.009842 /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod(21): Reading nostruct-align/1chuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32585/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod (nostruct-align/1chuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.461870 /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod(22): Reading nostruct-align/1awsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-14867/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod (nostruct-align/1awsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.078886 /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod(22): Reading nostruct-align/1koe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14605/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod (nostruct-align/1koe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.483885 /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod(21): Reading nostruct-align/1pxtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-3221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod (nostruct-align/1pxtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.315870 /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod(21): Reading nostruct-align/1bu7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-30510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod (nostruct-align/1bu7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.266842 /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod(21): Reading nostruct-align/4gatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod (nostruct-align/4gatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.377865 /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod(21): Reading nostruct-align/1ryc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-31459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod (nostruct-align/1ryc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.607849 /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod(21): Reading nostruct-align/1tbaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15938/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod (nostruct-align/1tbaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.386856 /projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod(21): Reading nostruct-align/4ts1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16911/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod (nostruct-align/4ts1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.187851 /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod(21): Reading nostruct-align/2rveA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-20815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod (nostruct-align/2rveA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.338873 /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod(21): Reading nostruct-align/1smeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-11526/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod (nostruct-align/1smeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.022848 /projects/compbio/experiments/models.97/pdb/1l/1l7vA/nostruct-align/1l7vA.t2k-w0.5.mod(22): Reading nostruct-align/1l7vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-19007/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7vA/nostruct-align/1l7vA.t2k-w0.5.mod (nostruct-align/1l7vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l7vA/nostruct-align/1l7vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.191841 /projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod(22): Reading nostruct-align/1ii2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2616/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod (nostruct-align/1ii2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.780888 /projects/compbio/experiments/models.97/pdb/1l/1l7vC/nostruct-align/1l7vC.t2k-w0.5.mod(22): Reading nostruct-align/1l7vC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7vC/nostruct-align/1l7vC.t2k-w0.5.mod (nostruct-align/1l7vC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l7vC/nostruct-align/1l7vC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.234886 /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod(22): Reading nostruct-align/1befA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18557/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod (nostruct-align/1befA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.846849 /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod(21): Reading nostruct-align/1igtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod (nostruct-align/1igtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.122847 /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod(22): Reading nostruct-align/1i60A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod (nostruct-align/1i60A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.949844 /projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod(22): Reading nostruct-align/1igtD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod (nostruct-align/1igtD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.613834 /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod(21): Reading nostruct-align/2fivA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-2325/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod (nostruct-align/2fivA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.707884 /projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod(21): Reading nostruct-align/1qfgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod (nostruct-align/1qfgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.091850 /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod(21): Reading nostruct-align/1dfd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24970/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod (nostruct-align/1dfd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.014839 /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod(21): Reading nostruct-align/1ryt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25931/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod (nostruct-align/1ryt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.837854 /projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod(22): Reading nostruct-align/1eq2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24020/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod (nostruct-align/1eq2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.821842 /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod(21): Reading nostruct-align/1mngA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-19700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod (nostruct-align/1mngA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.531847 /projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod(21): Reading nostruct-align/1qmqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-7707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod (nostruct-align/1qmqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.362858 /projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod(21): Reading nostruct-align/1f8xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-26703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod (nostruct-align/1f8xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.798876 /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod(22): Reading nostruct-align/1kpf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8602/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod (nostruct-align/1kpf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.145874 /projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod(22): Reading nostruct-align/1k4gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-7295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod (nostruct-align/1k4gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.417856 /projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod(21): Reading nostruct-align/5cpp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-31450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod (nostruct-align/5cpp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.354837 /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod(22): Reading nostruct-align/1bu8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25637/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod (nostruct-align/1bu8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.396851 /projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod(21): Reading nostruct-align/1ac6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28500/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod (nostruct-align/1ac6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.100847 /projects/compbio/experiments/models.97/pdb/1j/1jrmA/nostruct-align/1jrmA.t2k-w0.5.mod(22): Reading nostruct-align/1jrmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22858/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrmA/nostruct-align/1jrmA.t2k-w0.5.mod (nostruct-align/1jrmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrmA/nostruct-align/1jrmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.418831 /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod(21): Reading nostruct-align/1a04A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-18499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod (nostruct-align/1a04A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.379879 /projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod(21): Reading nostruct-align/3rnt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31165/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod (nostruct-align/3rnt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.858831 /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod(22): Reading nostruct-align/1goiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod (nostruct-align/1goiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.983835 /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod(21): Reading nostruct-align/1dfx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod (nostruct-align/1dfx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.206841 /projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod(21): Reading nostruct-align/1dleA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod (nostruct-align/1dleA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.478834 /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod(22): Reading nostruct-align/1d9cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1653/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod (nostruct-align/1d9cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.208887 /projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod(21): Reading nostruct-align/1h8mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-17570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod (nostruct-align/1h8mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.868877 /projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod(21): Reading nostruct-align/1ehkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod (nostruct-align/1ehkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.548838 /projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod(21): Reading nostruct-align/1pjbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28359/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod (nostruct-align/1pjbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.233847 /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod(21): Reading nostruct-align/1rzl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14884/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod (nostruct-align/1rzl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.099855 /projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod(22): Reading nostruct-align/1ehkC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod (nostruct-align/1ehkC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.008852 /projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod(22): Reading nostruct-align/1i4sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod (nostruct-align/1i4sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.303860 /projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod(22): Reading nostruct-align/1gx1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19674/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod (nostruct-align/1gx1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.194839 /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod(22): Reading nostruct-align/1qfhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9633/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod (nostruct-align/1qfhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.675859 /projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod(21): Reading nostruct-align/1f1oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod (nostruct-align/1f1oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.696871 /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod(21): Reading nostruct-align/1hryA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7077/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod (nostruct-align/1hryA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.062883 /projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod(21): Reading nostruct-align/1eq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-11301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod (nostruct-align/1eq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.681835 /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod(21): Reading nostruct-align/2vik.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod (nostruct-align/2vik.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.619839 /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod(21): Reading nostruct-align/1zaaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod (nostruct-align/1zaaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -34.864883 /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod(21): Reading nostruct-align/1b9oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod (nostruct-align/1b9oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.339846 /projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod(22): Reading nostruct-align/1qmrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod (nostruct-align/1qmrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.940876 /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod(21): Reading nostruct-align/2vil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9373/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod (nostruct-align/2vil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.619839 /projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod(22): Reading nostruct-align/1f8yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod (nostruct-align/1f8yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.798876 /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod(22): Reading nostruct-align/1qo0D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod (nostruct-align/1qo0D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.511860 /projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod(21): Reading nostruct-align/1fm9D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod (nostruct-align/1fm9D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.802870 /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod(22): Reading nostruct-align/2gmfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17488/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod (nostruct-align/2gmfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.983866 /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod(21): Reading nostruct-align/1lylA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod (nostruct-align/1lylA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.803877 /projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod(22): Reading nostruct-align/1ivhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod (nostruct-align/1ivhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.166838 /projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod(22): Reading nostruct-align/1hdfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod (nostruct-align/1hdfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.671850 /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod(21): Reading nostruct-align/1aayA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-13203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod (nostruct-align/1aayA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod . Average NLL-Simple NULL score: -35.029831 /projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod(21): Reading nostruct-align/1a05A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3050/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod (nostruct-align/1a05A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.966827 /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod(22): Reading nostruct-align/1uteA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod (nostruct-align/1uteA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.001829 /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod(21): Reading nostruct-align/2anhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-4210/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod (nostruct-align/2anhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.481888 /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod(22): Reading nostruct-align/1pjcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6464/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod (nostruct-align/1pjcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.152851 /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod(22): Reading nostruct-align/1dlfH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3278/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod (nostruct-align/1dlfH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.001856 /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod(22): Reading nostruct-align/1behA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3875/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod (nostruct-align/1behA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.599859 /projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod(21): Reading nostruct-align/1i4tB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-8503/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod (nostruct-align/1i4tB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.626848 /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod(22): Reading nostruct-align/1dlfL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-25408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod (nostruct-align/1dlfL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.505859 /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod(21): Reading nostruct-align/1hrzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28645/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod (nostruct-align/1hrzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.056854 /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod(21): Reading nostruct-align/1rboC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod (nostruct-align/1rboC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.898830 /projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod(21): Reading nostruct-align/6tmnE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3870/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod (nostruct-align/6tmnE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.966873 /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod(21): Reading nostruct-align/1b9pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod (nostruct-align/1b9pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.015852 /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod(22): Reading nostruct-align/1jkeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7989/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod (nostruct-align/1jkeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.888866 /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod(22): Reading nostruct-align/1dhn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod (nostruct-align/1dhn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.870884 /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod(22): Reading nostruct-align/1k4iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod (nostruct-align/1k4iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.490879 /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod(21): Reading nostruct-align/1dhr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod (nostruct-align/1dhr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.981857 /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod(22): Reading nostruct-align/1dhs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod (nostruct-align/1dhs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.831833 /projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod(22): Reading nostruct-align/1fseA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9454/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod (nostruct-align/1fseA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.756842 /projects/compbio/experiments/models.97/pdb/1j/1jroA/nostruct-align/1jroA.t2k-w0.5.mod(22): Reading nostruct-align/1jroA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9170/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jroA/nostruct-align/1jroA.t2k-w0.5.mod (nostruct-align/1jroA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jroA/nostruct-align/1jroA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.666883 /projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod(22): Reading nostruct-align/1l0oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-29027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod (nostruct-align/1l0oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.721842 /projects/compbio/experiments/models.97/pdb/1l/1l0oC/nostruct-align/1l0oC.t2k-w0.5.mod(22): Reading nostruct-align/1l0oC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-18923/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0oC/nostruct-align/1l0oC.t2k-w0.5.mod (nostruct-align/1l0oC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l0oC/nostruct-align/1l0oC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.946856 /projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod(21): Reading nostruct-align/1krn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1910/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod (nostruct-align/1krn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.618879 /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod(21): Reading nostruct-align/1dhx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29466/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod (nostruct-align/1dhx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.374876 /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod(21): Reading nostruct-align/1dhy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod (nostruct-align/1dhy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.763832 /projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod(21): Reading nostruct-align/1d9eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod (nostruct-align/1d9eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.362850 /projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod(22): Reading nostruct-align/1fzoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod (nostruct-align/1fzoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.193880 /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod(21): Reading nostruct-align/1krs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod (nostruct-align/1krs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.431831 /projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod(21): Reading nostruct-align/1fzoB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod (nostruct-align/1fzoB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.882889 /projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod(22): Reading nostruct-align/1igwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4172/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod (nostruct-align/1igwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.535847 /projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod(21): Reading nostruct-align/1zec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod (nostruct-align/1zec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.348879 /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod(22): Reading nostruct-align/1e5kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod (nostruct-align/1e5kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.602880 /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod(21): Reading nostruct-align/1ii5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-22802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod (nostruct-align/1ii5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.145842 /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t2k-w0.5.mod(22): Reading nostruct-align/1gx3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t2k-w0.5.mod (nostruct-align/1gx3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.122847 /projects/compbio/experiments/models.97/pdb/1g/1gvuA/nostruct-align/1gvuA.t2k-w0.5.mod(22): Reading nostruct-align/1gvuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gvuA/nostruct-align/1gvuA.t2k-w0.5.mod (nostruct-align/1gvuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gvuA/nostruct-align/1gvuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.861876 /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod(22): Reading nostruct-align/1i4uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15405/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod (nostruct-align/1i4uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.907852 /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod(21): Reading nostruct-align/1qfjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod (nostruct-align/1qfjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.517838 /projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod(21): Reading nostruct-align/1ht9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-24320/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod (nostruct-align/1ht9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.982834 /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod(21): Reading nostruct-align/1dih.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1125/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod (nostruct-align/1dih.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.502834 /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod(21): Reading nostruct-align/1apmE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-16982/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod (nostruct-align/1apmE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.385830 /projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod(22): Reading nostruct-align/1qo2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod (nostruct-align/1qo2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.300850 /projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod(21): Reading nostruct-align/1qmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25231/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod (nostruct-align/1qmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.520828 /projects/compbio/experiments/models.97/pdb/1j/1jkfA/nostruct-align/1jkfA.t2k-w0.5.mod(22): Reading nostruct-align/1jkfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11385/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkfA/nostruct-align/1jkfA.t2k-w0.5.mod (nostruct-align/1jkfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkfA/nostruct-align/1jkfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.908846 /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod(22): Reading nostruct-align/1dik.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13441/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod (nostruct-align/1dik.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.036840 /projects/compbio/experiments/models.97/pdb/1j/1j8dA/nostruct-align/1j8dA.t2k-w0.5.mod(22): Reading nostruct-align/1j8dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2913/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8dA/nostruct-align/1j8dA.t2k-w0.5.mod (nostruct-align/1j8dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8dA/nostruct-align/1j8dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.152832 /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading nostruct-align/1hzdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -35.613873 /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod(22): Reading nostruct-align/1apmI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod (nostruct-align/1apmI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.531862 /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod(22): Reading nostruct-align/1din.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15283/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod (nostruct-align/1din.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.285875 /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod(22): Reading nostruct-align/1c75A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod (nostruct-align/1c75A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.268831 /projects/compbio/experiments/models.97/pdb/1k/1k4jA/nostruct-align/1k4jA.t2k-w0.5.mod(22): Reading nostruct-align/1k4jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-6008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4jA/nostruct-align/1k4jA.t2k-w0.5.mod (nostruct-align/1k4jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4jA/nostruct-align/1k4jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.825859 /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod(22): Reading nostruct-align/1hdhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod (nostruct-align/1hdhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.709850 /projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod(22): Reading nostruct-align/1fsfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod (nostruct-align/1fsfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.208883 /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod(22): Reading nostruct-align/3pmgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14268/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod (nostruct-align/3pmgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.209858 /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod(22): Reading nostruct-align/1div.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9821/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod (nostruct-align/1div.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.156885 /projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod(22): Reading nostruct-align/1knvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod (nostruct-align/1knvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.613880 /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod(21): Reading nostruct-align/1dlhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-13956/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod (nostruct-align/1dlhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.495834 /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod(22): Reading nostruct-align/2nacA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod (nostruct-align/2nacA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.195871 /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod(21): Reading nostruct-align/1ksr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod (nostruct-align/1ksr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.836889 /projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod(22): Reading nostruct-align/1h8pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod (nostruct-align/1h8pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.512884 /projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod(22): Reading nostruct-align/1fzpB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod (nostruct-align/1fzpB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.343842 /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod(21): Reading nostruct-align/1kst.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31010/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod (nostruct-align/1kst.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.770853 /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod(21): Reading nostruct-align/1a6bB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26274/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod (nostruct-align/1a6bB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.785852 /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod(21): Reading nostruct-align/1zfd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod (nostruct-align/1zfd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.217831 /projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod(22): Reading nostruct-align/1eq6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17213/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod (nostruct-align/1eq6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.509840 /projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod(21): Reading nostruct-align/1b9rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-29829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod (nostruct-align/1b9rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.135870 /projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod(21): Reading nostruct-align/1zfo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod (nostruct-align/1zfo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.596869 /projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod(21): Reading nostruct-align/1qmuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod (nostruct-align/1qmuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.689877 /projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod(22): Reading nostruct-align/1jkgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12308/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod (nostruct-align/1jkgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.112854 /projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod(22): Reading nostruct-align/1j8eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4188/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod (nostruct-align/1j8eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.646868 /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod(21): Reading nostruct-align/1qo3C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod (nostruct-align/1qo3C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.040874 /projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod(22): Reading nostruct-align/1jkgB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod (nostruct-align/1jkgB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.696838 /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod(22): Reading nostruct-align/1kte.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8478/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod (nostruct-align/1kte.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.955875 /projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod(21): Reading nostruct-align/1ewaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod (nostruct-align/1ewaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.492872 /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod(22): Reading nostruct-align/1g5aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-6756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod (nostruct-align/1g5aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.497881 /projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod(22): Reading nostruct-align/1hdiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod (nostruct-align/1hdiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.623888 /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod(22): Reading nostruct-align/1fsgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod (nostruct-align/1fsgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.977848 /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod(21): Reading nostruct-align/1cpcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod (nostruct-align/1cpcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.692831 /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod(21): Reading nostruct-align/1cpcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod (nostruct-align/1cpcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.805841 /projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod(21): Reading nostruct-align/1wejH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod (nostruct-align/1wejH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.096834 /projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod(21): Reading nostruct-align/1dliA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2393/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod (nostruct-align/1dliA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.725832 /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod(21): Reading nostruct-align/2nadA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24211/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod (nostruct-align/2nadA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.224855 /projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod(21): Reading nostruct-align/1fzqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod (nostruct-align/1fzqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.780853 /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod(22): Reading nostruct-align/2polA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod (nostruct-align/2polA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864830 /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod(21): Reading nostruct-align/1a6cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod (nostruct-align/1a6cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.215874 /projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod(22): Reading nostruct-align/1e5mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod (nostruct-align/1e5mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.190874 /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22): Reading nostruct-align/1ii7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod (nostruct-align/1ii7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.702862 /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod(22): Reading nostruct-align/1gx5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-26167/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod (nostruct-align/1gx5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.181877 /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod(21): Reading nostruct-align/1cpcL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-5339/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod (nostruct-align/1cpcL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.789862 /projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod(22): Reading nostruct-align/1i4wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14777/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod (nostruct-align/1i4wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.339844 /projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod(22): Reading nostruct-align/1qflA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod (nostruct-align/1qflA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.037830 /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod(21): Reading nostruct-align/1b2iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32185/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod (nostruct-align/1b2iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.680864 /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod(21): Reading nostruct-align/1ktx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod (nostruct-align/1ktx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.728838 /projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod(22): Reading nostruct-align/1f1sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22613/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod (nostruct-align/1f1sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.348862 /projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod(22): Reading nostruct-align/1eq7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod (nostruct-align/1eq7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.363838 /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod(22): Reading nostruct-align/1dssG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod (nostruct-align/1dssG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.951859 /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod(22): Reading nostruct-align/1qmvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod (nostruct-align/1qmvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.773872 /projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod(22): Reading nostruct-align/1j8fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod (nostruct-align/1j8fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.359884 /projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod(22): Reading nostruct-align/1kgnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod (nostruct-align/1kgnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.341839 /projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod(21): Reading nostruct-align/1c5yB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28127/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod (nostruct-align/1c5yB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.102842 /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod(22): Reading nostruct-align/1ay7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod (nostruct-align/1ay7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.279839 /projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod(21): Reading nostruct-align/1g5bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13738/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod (nostruct-align/1g5bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.374887 /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod(21): Reading nostruct-align/1kuh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod (nostruct-align/1kuh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.701868 /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod(22): Reading nostruct-align/2hipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod (nostruct-align/2hipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.013882 /projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod(21): Reading nostruct-align/1fshA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24040/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod (nostruct-align/1fshA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.812840 /projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod(22): Reading nostruct-align/1jrrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod (nostruct-align/1jrrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.718887 /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod(21): Reading nostruct-align/1tbgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod (nostruct-align/1tbgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.640852 /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod(21): Reading nostruct-align/1kum.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-18018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod (nostruct-align/1kum.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.769888 /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod(22): Reading nostruct-align/1kp6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod (nostruct-align/1kp6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.882887 /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod(22): Reading nostruct-align/1tbgE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32659/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod (nostruct-align/1tbgE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.627878 /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod(21): Reading nostruct-align/1dljA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25256/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod (nostruct-align/1dljA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.922831 /projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod(22): Reading nostruct-align/1fzrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14245/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod (nostruct-align/1fzrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.220854 /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod(21): Reading nostruct-align/1a6dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16561/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod (nostruct-align/1a6dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.460880 /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod(22): Reading nostruct-align/1qfmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod (nostruct-align/1qfmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.610857 /projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod(21): Reading nostruct-align/1du2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-26218/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod (nostruct-align/1du2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.202879 /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod(22): Reading nostruct-align/1f32A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11748/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod (nostruct-align/1f32A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.766834 /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod(21): Reading nostruct-align/1dlc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-8680/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod (nostruct-align/1dlc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.948847 /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod(22): Reading nostruct-align/1nciA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod (nostruct-align/1nciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.242878 /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod(21): Reading nostruct-align/1mnmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32101/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod (nostruct-align/1mnmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.944862 /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod(21): Reading nostruct-align/1mnmC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-16661/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod (nostruct-align/1mnmC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.538879 /projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod(21): Reading nostruct-align/1hzgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod (nostruct-align/1hzgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.719852 /projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod(21): Reading nostruct-align/1g5cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod (nostruct-align/1g5cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.951839 /projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod(22): Reading nostruct-align/4gr1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod (nostruct-align/4gr1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.338837 /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod(21): Reading nostruct-align/1deaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod (nostruct-align/1deaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.938887 /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod(22): Reading nostruct-align/1hdkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod (nostruct-align/1hdkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.392853 /projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod(22): Reading nostruct-align/1fsiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod (nostruct-align/1fsiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.790869 /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod(21): Reading nostruct-align/1eagA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod (nostruct-align/1eagA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.412888 /projects/compbio/experiments/models.97/pdb/1l/1l0sA/nostruct-align/1l0sA.t2k-w0.5.mod(22): Reading nostruct-align/1l0sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-1115/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0sA/nostruct-align/1l0sA.t2k-w0.5.mod (nostruct-align/1l0sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l0sA/nostruct-align/1l0sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.524887 /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod(22): Reading nostruct-align/1knyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3469/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod (nostruct-align/1knyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.664829 /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod(22): Reading nostruct-align/1smlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-24408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod (nostruct-align/1smlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.269861 /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod(21): Reading nostruct-align/1ystH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod (nostruct-align/1ystH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.277868 /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod(21): Reading nostruct-align/1kvs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-3993/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod (nostruct-align/1kvs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.250877 /projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod(21): Reading nostruct-align/1cwoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19097/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod (nostruct-align/1cwoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.824852 /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod(21): Reading nostruct-align/1zid.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30375/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod (nostruct-align/1zid.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.636873 /projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod(22): Reading nostruct-align/1i4yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14873/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod (nostruct-align/1i4yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.460850 /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod(21): Reading nostruct-align/1qfnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7169/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod (nostruct-align/1qfnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.862881 /projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod(22): Reading nostruct-align/1du3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21192/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod (nostruct-align/1du3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.656841 /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod(21): Reading nostruct-align/1dmc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod (nostruct-align/1dmc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.330864 /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod(21): Reading nostruct-align/1dme.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod (nostruct-align/1dme.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.351866 /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod(21): Reading nostruct-align/1eq9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-8135/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod (nostruct-align/1eq9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.687872 /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod(22): Reading nostruct-align/1zin.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4336/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod (nostruct-align/1zin.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.738859 /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod(22): Reading nostruct-align/1b9uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-21371/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod (nostruct-align/1b9uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.134832 /projects/compbio/experiments/models.97/pdb/1v/1vppV/nostruct-align/1vppV.t2k-w0.5.mod(22): Reading nostruct-align/1vppV.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vppV/nostruct-align/1vppV.t2k-w0.5.mod (nostruct-align/1vppV.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vppV/nostruct-align/1vppV.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.107882 /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod(22): Reading nostruct-align/1vppX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27955/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod (nostruct-align/1vppX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.249832 /projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod(21): Reading nostruct-align/1cc1L.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21308/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod (nostruct-align/1cc1L.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.935881 /projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod(22): Reading nostruct-align/1j8hD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod (nostruct-align/1j8hD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.839867 /projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod(22): Reading nostruct-align/1debA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31973/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod (nostruct-align/1debA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.918846 /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod(21): Reading nostruct-align/1sfcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-21640/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod (nostruct-align/1sfcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.636833 /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod(21): Reading nostruct-align/1dmr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-32414/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod (nostruct-align/1dmr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.925859 /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod(21): Reading nostruct-align/1sfcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod (nostruct-align/1sfcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.093859 /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod(21): Reading nostruct-align/1sfcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod (nostruct-align/1sfcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.424828 /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod(21): Reading nostruct-align/1sfcD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod (nostruct-align/1sfcD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.188875 /projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod(21): Reading nostruct-align/1cc1S.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod (nostruct-align/1cc1S.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.913849 /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod(21): Reading nostruct-align/1sfcE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19450/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod (nostruct-align/1sfcE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.565870 /projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod(22): Reading nostruct-align/1knzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24536/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod (nostruct-align/1knzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.604839 /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod(22): Reading nostruct-align/1aihA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-4869/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod (nostruct-align/1aihA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.538860 /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod(22): Reading nostruct-align/1ej0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27233/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod (nostruct-align/1ej0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.114828 /projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod(21): Reading nostruct-align/2pooA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod (nostruct-align/2pooA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.195879 /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod(22): Reading nostruct-align/1e5pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod (nostruct-align/1e5pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.879881 /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod(21): Reading nostruct-align/1cwpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30381/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod (nostruct-align/1cwpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.302856 /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod(21): Reading nostruct-align/1benA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14686/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod (nostruct-align/1benA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.790888 /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod(22): Reading nostruct-align/1qfoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2716/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod (nostruct-align/1qfoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.348877 /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod(22): Reading nostruct-align/1benB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20817/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod (nostruct-align/1benB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.172850 /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod(21): Reading nostruct-align/1dsvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod (nostruct-align/1dsvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.638857 /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod(21): Reading nostruct-align/1qfoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod (nostruct-align/1qfoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.288855 /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t2k-w0.5.mod(22): Reading nostruct-align/1lriA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t2k-w0.5.mod (nostruct-align/1lriA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.597862 /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod(21): Reading nostruct-align/1ar0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6229/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod (nostruct-align/1ar0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.989874 /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod(22): Reading nostruct-align/1ps1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21439/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod (nostruct-align/1ps1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.396881 /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod(22): Reading nostruct-align/4sgbI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod (nostruct-align/4sgbI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.571829 /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod(21): Reading nostruct-align/1bn6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod (nostruct-align/1bn6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.902882 /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod(21): Reading nostruct-align/1blxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-9173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod (nostruct-align/1blxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.461878 /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod(22): Reading nostruct-align/1qo7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod (nostruct-align/1qo7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.603834 /projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod(22): Reading nostruct-align/1qmyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4238/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod (nostruct-align/1qmyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.927877 /projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod(22): Reading nostruct-align/1hziA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod (nostruct-align/1hziA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.012875 /projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod(21): Reading nostruct-align/1muyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2258/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod (nostruct-align/1muyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.796867 /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod(21): Reading nostruct-align/1qubA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24113/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod (nostruct-align/1qubA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.776857 /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod(21): Reading nostruct-align/1hdmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod (nostruct-align/1hdmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.769886 /projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod(21): Reading nostruct-align/1jruA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod (nostruct-align/1jruA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.519882 /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod(21): Reading nostruct-align/1dnv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod (nostruct-align/1dnv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.549887 /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod(22): Reading nostruct-align/1eaiC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod (nostruct-align/1eaiC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.464853 /projects/compbio/experiments/models.97/pdb/1k/1kp9B/nostruct-align/1kp9B.t2k-w0.5.mod(22): Reading nostruct-align/1kp9B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kp9B/nostruct-align/1kp9B.t2k-w0.5.mod (nostruct-align/1kp9B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kp9B/nostruct-align/1kp9B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.452860 /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod(21): Reading nostruct-align/1smnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-18142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod (nostruct-align/1smnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.043877 /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod(21): Reading nostruct-align/1h8uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12541/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod (nostruct-align/1h8uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.411848 /projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod(22): Reading nostruct-align/1ej1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24918/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod (nostruct-align/1ej1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.745855 /projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod(21): Reading nostruct-align/2tgpI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-28733/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod (nostruct-align/2tgpI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.061850 /projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod(21): Reading nostruct-align/1kxu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18610/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod (nostruct-align/1kxu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.490871 /projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod(21): Reading nostruct-align/1i69A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16825/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod (nostruct-align/1i69A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.977877 /projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod(22): Reading nostruct-align/2mllB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod (nostruct-align/2mllB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.593876 /projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod(21): Reading nostruct-align/1fdyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-5995/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod (nostruct-align/1fdyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.447853 /projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod(21): Reading nostruct-align/1kvdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod (nostruct-align/1kvdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.501883 /projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod(21): Reading nostruct-align/1kvdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17401/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod (nostruct-align/1kvdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.335878 /projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod(22): Reading nostruct-align/1f35A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5734/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod (nostruct-align/1f35A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.151842 /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod(21): Reading nostruct-align/1ounA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod (nostruct-align/1ounA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.157869 /projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod(22): Reading nostruct-align/1jdbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9673/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod (nostruct-align/1jdbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.778873 /projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod(21): Reading nostruct-align/1cc3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26034/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod (nostruct-align/1cc3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.447861 /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod(21): Reading nostruct-align/1cauA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24932/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod (nostruct-align/1cauA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.603861 /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod(21): Reading nostruct-align/1cauB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod (nostruct-align/1cauB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.934862 /projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod(21): Reading nostruct-align/1c01A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32662/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod (nostruct-align/1c01A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.183857 /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod(21): Reading nostruct-align/1sat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-24158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod (nostruct-align/1sat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.055828 /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod(21): Reading nostruct-align/1bn7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29270/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod (nostruct-align/1bn7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.009880 /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod(21): Reading nostruct-align/1doi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod (nostruct-align/1doi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.139853 /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod(22): Reading nostruct-align/1b9wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7631/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod (nostruct-align/1b9wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.006876 /projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod(22): Reading nostruct-align/1qmzB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod (nostruct-align/1qmzB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.509865 /projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod(21): Reading nostruct-align/1ghhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-8809/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod (nostruct-align/1ghhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.739885 /projects/compbio/experiments/models.97/pdb/1k/1ki0A/nostruct-align/1ki0A.t2k-w0.5.mod(22): Reading nostruct-align/1ki0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-21609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ki0A/nostruct-align/1ki0A.t2k-w0.5.mod (nostruct-align/1ki0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ki0A/nostruct-align/1ki0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.730860 /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod(22): Reading nostruct-align/1ewfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2251/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod (nostruct-align/1ewfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.431860 /projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod(22): Reading nostruct-align/1fslA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20087/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod (nostruct-align/1fslA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.612867 /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod(22): Reading nostruct-align/1eajA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23434/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod (nostruct-align/1eajA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.391878 /projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod(21): Reading nostruct-align/1ib2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-1123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod (nostruct-align/1ib2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.465849 /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod(22): Reading nostruct-align/1vpsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod (nostruct-align/1vpsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.525860 /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod(21): Reading nostruct-align/1vpsB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27157/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod (nostruct-align/1vpsB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.492865 /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod(22): Reading nostruct-align/1oneA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15018/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod (nostruct-align/1oneA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.364866 /projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod(22): Reading nostruct-align/1hm6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9445/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod (nostruct-align/1hm6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.813869 /projects/compbio/experiments/models.97/pdb/31/31bi/nostruct-align/31bi.t2k-w0.5.mod(22): Reading nostruct-align/31bi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/31/31bi/nostruct-align/31bi.t2k-w0.5.mod (nostruct-align/31bi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/31/31bi/nostruct-align/31bi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.741884 /projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod(22): Reading nostruct-align/1h8vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-24706/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod (nostruct-align/1h8vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.545870 /projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod(22): Reading nostruct-align/1ej2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod (nostruct-align/1ej2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.195860 /projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod(22): Reading nostruct-align/1e5rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod (nostruct-align/1e5rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.139858 /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod(22): Reading nostruct-align/1kveA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod (nostruct-align/1kveA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.501883 /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod(22): Reading nostruct-align/1sbp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2208/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod (nostruct-align/1sbp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.521839 /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod(21): Reading nostruct-align/1qfqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-18540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod (nostruct-align/1qfqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.105860 /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod(22): Reading nostruct-align/1kveB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-4105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod (nostruct-align/1kveB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.335878 /projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod(22): Reading nostruct-align/1dsxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9186/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod (nostruct-align/1dsxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.482876 /projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod(22): Reading nostruct-align/1c02A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod (nostruct-align/1c02A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.818848 /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod(21): Reading nostruct-align/1dpe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22037/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod (nostruct-align/1dpe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.371857 /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod(21): Reading nostruct-align/1aijL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-21107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod (nostruct-align/1aijL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.994852 /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod(21): Reading nostruct-align/1bn8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod (nostruct-align/1bn8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.952877 /projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod(21): Reading nostruct-align/1e70M.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-13048/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod (nostruct-align/1e70M.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.120888 /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod(21): Reading nostruct-align/1flcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod (nostruct-align/1flcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.067848 /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod(21): Reading nostruct-align/1b9xB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-14747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod (nostruct-align/1b9xB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.588839 /projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod(21): Reading nostruct-align/1f9aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod (nostruct-align/1f9aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.950853 /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod(21): Reading nostruct-align/1flcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod (nostruct-align/1flcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.353888 /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod(21): Reading nostruct-align/1jkmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23473/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod (nostruct-align/1jkmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.563879 /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod(21): Reading nostruct-align/1jkmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27800/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod (nostruct-align/1jkmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.437876 /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod(22): Reading nostruct-align/1kgsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-15347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod (nostruct-align/1kgsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.562885 /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod(21): Reading nostruct-align/1dpo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-6013/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod (nostruct-align/1dpo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.244875 /projects/compbio/experiments/models.97/pdb/1g/1g5gB/nostruct-align/1g5gB.t2k-w0.5.mod(22): Reading nostruct-align/1g5gB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-10895/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5gB/nostruct-align/1g5gB.t2k-w0.5.mod (nostruct-align/1g5gB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5gB/nostruct-align/1g5gB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.558836 /projects/compbio/experiments/models.97/pdb/1k/1ki1B/nostruct-align/1ki1B.t2k-w0.5.mod(22): Reading nostruct-align/1ki1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ki1B/nostruct-align/1ki1B.t2k-w0.5.mod (nostruct-align/1ki1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1ki1B/nostruct-align/1ki1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.276834 /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod(21): Reading nostruct-align/2olbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-2612/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod (nostruct-align/2olbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.961845 /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod(22): Reading nostruct-align/1hdoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29994/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod (nostruct-align/1hdoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.099859 /projects/compbio/experiments/models.97/pdb/1l/1lcyA/nostruct-align/1lcyA.t2k-w0.5.mod(22): Reading nostruct-align/1lcyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10697/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lcyA/nostruct-align/1lcyA.t2k-w0.5.mod (nostruct-align/1lcyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lcyA/nostruct-align/1lcyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.110842 /projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod(22): Reading nostruct-align/1l0wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15776/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod (nostruct-align/1l0wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.998888 /projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod(22): Reading nostruct-align/1ib3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21447/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod (nostruct-align/1ib3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.317839 /projects/compbio/experiments/models.97/pdb/1g/1gosA/nostruct-align/1gosA.t2k-w0.5.mod(22): Reading nostruct-align/1gosA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gosA/nostruct-align/1gosA.t2k-w0.5.mod (nostruct-align/1gosA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gosA/nostruct-align/1gosA.t2k-w0.5.mod . Average NLL-Simple NULL score: -30.192831 /projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod(22): Reading nostruct-align/1deeG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod (nostruct-align/1deeG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.585857 /projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod(21): Reading nostruct-align/1ej3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod (nostruct-align/1ej3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.111849 /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod(21): Reading nostruct-align/1aikC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod (nostruct-align/1aikC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.173876 /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod(21): Reading nostruct-align/1sco.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-12180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod (nostruct-align/1sco.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.724886 /projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod(22): Reading nostruct-align/1ff9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13324/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod (nostruct-align/1ff9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.811867 /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod(21): Reading nostruct-align/1smpI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15061/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod (nostruct-align/1smpI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.671846 /projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod(22): Reading nostruct-align/1f37A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod (nostruct-align/1f37A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.252880 /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod(21): Reading nostruct-align/1hsbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29916/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod (nostruct-align/1hsbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.479870 /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod(21): Reading nostruct-align/1scs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod (nostruct-align/1scs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.329870 /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod(21): Reading nostruct-align/1cawB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-19522/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod (nostruct-align/1cawB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.444880 /projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod(21): Reading nostruct-align/1hsbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod (nostruct-align/1hsbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.058844 /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod(21): Reading nostruct-align/1aikN.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24242/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod (nostruct-align/1aikN.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.068834 /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod(22): Reading nostruct-align/1b9yC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28543/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod (nostruct-align/1b9yC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.756878 /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k-w0.5.mod(22): Reading nostruct-align/1lyvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k-w0.5.mod (nostruct-align/1lyvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.670843 /projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod(22): Reading nostruct-align/1g5hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28625/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod (nostruct-align/1g5hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.031866 /projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod(22): Reading nostruct-align/1jt6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12755/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod (nostruct-align/1jt6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.912834 /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod(21): Reading nostruct-align/8rxnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-10347/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod (nostruct-align/8rxnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.722843 /projects/compbio/experiments/models.97/pdb/1g/1gq2A/nostruct-align/1gq2A.t2k-w0.5.mod(22): Reading nostruct-align/1gq2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-28992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gq2A/nostruct-align/1gq2A.t2k-w0.5.mod (nostruct-align/1gq2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gq2A/nostruct-align/1gq2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.519852 /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod(22): Reading nostruct-align/1gotB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod (nostruct-align/1gotB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.544834 /projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod(21): Reading nostruct-align/1d9nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26832/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod (nostruct-align/1d9nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.274836 /projects/compbio/experiments/models.97/pdb/1l/1lkcA/nostruct-align/1lkcA.t2k-w0.5.mod(22): Reading nostruct-align/1lkcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkcA/nostruct-align/1lkcA.t2k-w0.5.mod (nostruct-align/1lkcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkcA/nostruct-align/1lkcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.478870 /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod(21): Reading nostruct-align/1a6jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-19181/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod (nostruct-align/1a6jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.001883 /projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod(22): Reading nostruct-align/1gotG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2387/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod (nostruct-align/1gotG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.109854 /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod(21): Reading nostruct-align/2bjxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod (nostruct-align/2bjxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.688837 /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod(21): Reading nostruct-align/1znf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod (nostruct-align/1znf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.505863 /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod(22): Reading nostruct-align/1b2pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5964/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod (nostruct-align/1b2pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.704870 /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod(22): Reading nostruct-align/3dfr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod (nostruct-align/3dfr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.912884 /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod(22): Reading nostruct-align/1dszA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13829/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod (nostruct-align/1dszA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.894829 /projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod(22): Reading nostruct-align/1f1zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod (nostruct-align/1f1zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.420830 /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod(22): Reading nostruct-align/7at1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30837/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod (nostruct-align/7at1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.796854 /projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod(21): Reading nostruct-align/1dszB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod (nostruct-align/1dszB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.973886 /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod(21): Reading nostruct-align/1caxB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-8194/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod (nostruct-align/1caxB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.412868 /projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod(22): Reading nostruct-align/1znm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30493/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod (nostruct-align/1znm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.061844 /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod(21): Reading nostruct-align/1b9zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3059/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod (nostruct-align/1b9zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.619886 /projects/compbio/experiments/models.97/pdb/1h/1hzmA/nostruct-align/1hzmA.t2k-w0.5.mod(22): Reading nostruct-align/1hzmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2813/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzmA/nostruct-align/1hzmA.t2k-w0.5.mod (nostruct-align/1hzmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzmA/nostruct-align/1hzmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.745840 /projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod(22): Reading nostruct-align/1jkoC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22231/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod (nostruct-align/1jkoC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.726854 /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod(21): Reading nostruct-align/1lywA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3069/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod (nostruct-align/1lywA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.562859 /projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod(21): Reading nostruct-align/1dro.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11639/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod (nostruct-align/1dro.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.011856 /projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod(21): Reading nostruct-align/1ewiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22381/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod (nostruct-align/1ewiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.315849 /projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod(21): Reading nostruct-align/1d2eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25174/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod (nostruct-align/1d2eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.753853 /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod(22): Reading nostruct-align/1bteA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1075/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod (nostruct-align/1bteA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.220848 /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod(22): Reading nostruct-align/1fleI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14114/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod (nostruct-align/1fleI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.971863 /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22): Reading nostruct-align/1j8mF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod (nostruct-align/1j8mF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.638861 /projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod(21): Reading nostruct-align/1drs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod (nostruct-align/1drs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.573854 /projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod(22): Reading nostruct-align/1fsoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod (nostruct-align/1fsoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.309887 /projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod(22): Reading nostruct-align/1jt7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26853/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod (nostruct-align/1jt7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.463858 /projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod(22): Reading nostruct-align/1gouA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23730/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod (nostruct-align/1gouA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.107872 /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod(22): Reading nostruct-align/1drw.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25791/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod (nostruct-align/1drw.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.376835 /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod(22): Reading nostruct-align/1hm9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14278/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod (nostruct-align/1hm9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.221828 /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod(21): Reading nostruct-align/1smrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-6327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod (nostruct-align/1smrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.279856 /projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod(22): Reading nostruct-align/1fzyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod (nostruct-align/1fzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.740877 /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k-w0.5.mod(22): Reading nostruct-align/1l8bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-15937/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k-w0.5.mod (nostruct-align/1l8bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.558859 /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod(21): Reading nostruct-align/1sek.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod (nostruct-align/1sek.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.260881 /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod(21): Reading nostruct-align/1ej5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod (nostruct-align/1ej5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.202841 /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod(22): Reading nostruct-align/6gsvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod (nostruct-align/6gsvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.518850 /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod(22): Reading nostruct-align/1bg1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-27556/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod (nostruct-align/1bg1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.538858 /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod(22): Reading nostruct-align/1qftA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod (nostruct-align/1qftA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.806843 /projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod(22): Reading nostruct-align/1jdfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19997/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod (nostruct-align/1jdfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.334839 /projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod(21): Reading nostruct-align/1f39A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18095/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod (nostruct-align/1f39A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.751883 /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod(21): Reading nostruct-align/1c05A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-18070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod (nostruct-align/1c05A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.488869 /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod(21): Reading nostruct-align/1mntA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9196/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod (nostruct-align/1mntA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.543839 /projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod(21): Reading nostruct-align/1dsj.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod (nostruct-align/1dsj.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.784853 /projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod(22): Reading nostruct-align/1ewjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21547/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod (nostruct-align/1ewjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.855831 /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod(22): Reading nostruct-align/1pyaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24765/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod (nostruct-align/1pyaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.612875 /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod(22): Reading nostruct-align/1pyaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod (nostruct-align/1pyaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.212841 /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod(21): Reading nostruct-align/1d2fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-25276/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod (nostruct-align/1d2fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.256840 /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod(21): Reading nostruct-align/2hbg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod (nostruct-align/2hbg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.162867 /projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod(21): Reading nostruct-align/1jt8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22867/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod (nostruct-align/1jt8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.624849 /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod(21): Reading nostruct-align/1sfe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-21239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod (nostruct-align/1sfe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.161840 /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod(21): Reading nostruct-align/4htcI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18227/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod (nostruct-align/4htcI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.297863 /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod(21): Reading nostruct-align/1vbd4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod (nostruct-align/1vbd4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.315857 /projects/compbio/experiments/models.97/pdb/1l/1l8cA/nostruct-align/1l8cA.t2k-w0.5.mod(22): Reading nostruct-align/1l8cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-19010/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l8cA/nostruct-align/1l8cA.t2k-w0.5.mod (nostruct-align/1l8cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l8cA/nostruct-align/1l8cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.706881 /projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod(21): Reading nostruct-align/1ej6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-14332/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod (nostruct-align/1ej6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.221878 /projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod(21): Reading nostruct-align/1ehxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod (nostruct-align/1ehxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.245857 /projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod(21): Reading nostruct-align/1ej6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1072/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod (nostruct-align/1ej6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.939880 /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod(22): Reading nostruct-align/3daaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod (nostruct-align/3daaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.952839 /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod(21): Reading nostruct-align/1cwvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9849/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod (nostruct-align/1cwvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.118885 /projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod(21): Reading nostruct-align/1ej6D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-22974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod (nostruct-align/1ej6D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.974888 /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod(21): Reading nostruct-align/1qh3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14432/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod (nostruct-align/1qh3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.815861 /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod(22): Reading nostruct-align/1sfp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9833/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod (nostruct-align/1sfp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.766830 /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod(22): Reading nostruct-align/1cc8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12012/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod (nostruct-align/1cc8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.414862 /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod(21): Reading nostruct-align/1sh1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9933/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod (nostruct-align/1sh1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.651840 /projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod(21): Reading nostruct-align/1apxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11343/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod (nostruct-align/1apxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.565859 /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod(21): Reading nostruct-align/1epaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod (nostruct-align/1epaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.149845 /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod(22): Reading nostruct-align/3ezmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27782/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod (nostruct-align/3ezmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.393839 /projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod(21): Reading nostruct-align/2pabA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod (nostruct-align/2pabA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.527874 /projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod(22): Reading nostruct-align/1hzoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13117/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod (nostruct-align/1hzoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.400845 /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod(22): Reading nostruct-align/3bamA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10340/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod (nostruct-align/3bamA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.378885 /projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod(22): Reading nostruct-align/1ewkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11985/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod (nostruct-align/1ewkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.632843 /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod(21): Reading nostruct-align/3bamB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-18314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod (nostruct-align/3bamB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.437874 /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod(21): Reading nostruct-align/1dts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28120/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod (nostruct-align/1dts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.666861 /projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod(21): Reading nostruct-align/1wetA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-21668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod (nostruct-align/1wetA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.080887 /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod(21): Reading nostruct-align/2phlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod (nostruct-align/2phlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.832882 /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod(22): Reading nostruct-align/1pcfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14684/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod (nostruct-align/1pcfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.037859 /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod(21): Reading nostruct-align/1sgc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-17257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod (nostruct-align/1sgc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.992853 /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod(21): Reading nostruct-align/1dtx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28987/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod (nostruct-align/1dtx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.927883 /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod(21): Reading nostruct-align/1dn1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-25253/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod (nostruct-align/1dn1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.202845 /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod(21): Reading nostruct-align/1dn1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1025/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod (nostruct-align/1dn1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.400848 /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod(22): Reading nostruct-align/1smtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12974/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod (nostruct-align/1smtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.612862 /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod(21): Reading nostruct-align/2omf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26906/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod (nostruct-align/2omf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.817844 /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod(21): Reading nostruct-align/1smtB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-12348/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod (nostruct-align/1smtB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.710886 /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod(22): Reading nostruct-align/1lkfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod (nostruct-align/1lkfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.895861 /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod(21): Reading nostruct-align/1ehyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15663/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod (nostruct-align/1ehyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.896828 /projects/compbio/experiments/models.97/pdb/1k/1k4uP/nostruct-align/1k4uP.t2k-w0.5.mod(22): Reading nostruct-align/1k4uP.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4uP/nostruct-align/1k4uP.t2k-w0.5.mod (nostruct-align/1k4uP.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4uP/nostruct-align/1k4uP.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.981850 /projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod(22): Reading nostruct-align/1ihbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod (nostruct-align/1ihbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.097837 /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod(22): Reading nostruct-align/1cy5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16461/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod (nostruct-align/1cy5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.001835 /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod(22): Reading nostruct-align/1qh4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod (nostruct-align/1qh4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.665859 /projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod(22): Reading nostruct-align/1jdhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-7005/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod (nostruct-align/1jdhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.460846 /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod(21): Reading nostruct-align/1b2sD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13465/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod (nostruct-align/1b2sD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.500841 /projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod(22): Reading nostruct-align/1jdhB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod (nostruct-align/1jdhB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.498888 /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod(21): Reading nostruct-align/1apyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-21775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod (nostruct-align/1apyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.377850 /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod(21): Reading nostruct-align/1sgt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13064/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod (nostruct-align/1sgt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.327879 /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod(21): Reading nostruct-align/1apyB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26027/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod (nostruct-align/1apyB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.350872 /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod(21): Reading nostruct-align/1epbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12567/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod (nostruct-align/1epbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.444874 /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod(22): Reading nostruct-align/1jm0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod (nostruct-align/1jm0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.342888 /projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod(21): Reading nostruct-align/1f9fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod (nostruct-align/1f9fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.215857 /projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod(21): Reading nostruct-align/1hzpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod (nostruct-align/1hzpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.135860 /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod(21): Reading nostruct-align/1dun.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod (nostruct-align/1dun.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.024830 /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod(21): Reading nostruct-align/1bev1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23565/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod (nostruct-align/1bev1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.881836 /projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod(22): Reading nostruct-align/1k4vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12896/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod (nostruct-align/1k4vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.863867 /projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod(22): Reading nostruct-align/1hf2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod (nostruct-align/1hf2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.795837 /projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod(21): Reading nostruct-align/1gadO.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod (nostruct-align/1gadO.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.398855 /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod(21): Reading nostruct-align/1bev4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-27597/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod (nostruct-align/1bev4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.252836 /projects/compbio/experiments/models.97/pdb/1i/1ib8A/nostruct-align/1ib8A.t2k-w0.5.mod(22): Reading nostruct-align/1ib8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5377/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ib8A/nostruct-align/1ib8A.t2k-w0.5.mod (nostruct-align/1ib8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ib8A/nostruct-align/1ib8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.821848 /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k-w0.5.mod(22): Reading nostruct-align/1gq6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-10507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k-w0.5.mod (nostruct-align/1gq6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.896881 /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod(21): Reading nostruct-align/1shg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-3475/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod (nostruct-align/1shg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.952869 /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod(21): Reading nostruct-align/1f3z.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10638/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod (nostruct-align/1f3z.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.377855 /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod(22): Reading nostruct-align/1ej8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19310/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod (nostruct-align/1ej8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.172882 /projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod(22): Reading nostruct-align/1e5xA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2571/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod (nostruct-align/1e5xA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.271839 /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod(21): Reading nostruct-align/1cwxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-28388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod (nostruct-align/1cwxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.705851 /projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod(21): Reading nostruct-align/1ihcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod (nostruct-align/1ihcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.126839 /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod(21): Reading nostruct-align/1aipE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-14521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod (nostruct-align/1aipE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.622837 /projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod(22): Reading nostruct-align/1kvkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-14175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod (nostruct-align/1kvkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.505831 /projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod(21): Reading nostruct-align/1b2tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18755/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod (nostruct-align/1b2tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.139864 /projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod(21): Reading nostruct-align/1shp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod (nostruct-align/1shp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.006884 /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod(22): Reading nostruct-align/1qh5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17061/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod (nostruct-align/1qh5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.183872 /projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod(22): Reading nostruct-align/1jdiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod (nostruct-align/1jdiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.889864 /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod(21): Reading nostruct-align/1dvh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31940/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod (nostruct-align/1dvh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.304859 /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod(21): Reading nostruct-align/1zrn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-22441/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod (nostruct-align/1zrn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.882870 /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod(21): Reading nostruct-align/1fliA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod (nostruct-align/1fliA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.367887 /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k-w0.5.mod(22): Reading nostruct-align/1jm1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k-w0.5.mod (nostruct-align/1jm1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.071880 /projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod(22): Reading nostruct-align/1jksA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30382/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod (nostruct-align/1jksA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.232868 /projects/compbio/experiments/models.97/pdb/1q/1qfwM/nostruct-align/1qfwM.t2k-w0.5.mod(22): Reading nostruct-align/1qfwM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-22957/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfwM/nostruct-align/1qfwM.t2k-w0.5.mod (nostruct-align/1qfwM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfwM/nostruct-align/1qfwM.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.376829 /projects/compbio/experiments/models.97/pdb/1k/1kgyA/nostruct-align/1kgyA.t2k-w0.5.mod(22): Reading nostruct-align/1kgyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-12438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgyA/nostruct-align/1kgyA.t2k-w0.5.mod (nostruct-align/1kgyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kgyA/nostruct-align/1kgyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.881865 /projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod(22): Reading nostruct-align/1k4wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4421/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod (nostruct-align/1k4wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.818871 /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod(22): Reading nostruct-align/1dekA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod (nostruct-align/1dekA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.082829 /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod(22): Reading nostruct-align/1d2iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32005/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod (nostruct-align/1d2iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.817863 /projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod(22): Reading nostruct-align/1fu1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21570/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod (nostruct-align/1fu1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.371843 /projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod(22): Reading nostruct-align/1fu1B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-22204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod (nostruct-align/1fu1B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.841846 /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod(22): Reading nostruct-align/1sig.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod (nostruct-align/1sig.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.355846 /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod(21): Reading nostruct-align/2napA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-21763/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod (nostruct-align/2napA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.641859 /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod(21): Reading nostruct-align/1smvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod (nostruct-align/1smvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.618853 /projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod(21): Reading nostruct-align/1cwyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod (nostruct-align/1cwyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.744865 /projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod(22): Reading nostruct-align/1b43A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod (nostruct-align/1b43A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.998846 /projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod(22): Reading nostruct-align/1kvlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod (nostruct-align/1kvlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.980854 /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod(22): Reading nostruct-align/2mltA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod (nostruct-align/2mltA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.018831 /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod(21): Reading nostruct-align/1qfxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod (nostruct-align/1qfxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.843834 /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod(21): Reading nostruct-align/1sis.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod (nostruct-align/1sis.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.559853 /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod(21): Reading nostruct-align/1tbrR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod (nostruct-align/1tbrR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.333834 /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod(22): Reading nostruct-align/1qnaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2752/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod (nostruct-align/1qnaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.143839 /projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod(21): Reading nostruct-align/1fljA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30365/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod (nostruct-align/1fljA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.565880 /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod(22): Reading nostruct-align/1j8rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod (nostruct-align/1j8rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.602865 /projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod(21): Reading nostruct-align/1axdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3868/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod (nostruct-align/1axdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.339884 /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod(21): Reading nostruct-align/1ghpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24893/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod (nostruct-align/1ghpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.092833 /projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod(22): Reading nostruct-align/1ewnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod (nostruct-align/1ewnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.090860 /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod(21): Reading nostruct-align/1delA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-9722/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod (nostruct-align/1delA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.053864 /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod(22): Reading nostruct-align/1earA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod (nostruct-align/1earA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.573881 /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod(21): Reading nostruct-align/2hfh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22403/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod (nostruct-align/2hfh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.449879 /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod(22): Reading nostruct-align/1gq8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod (nostruct-align/1gq8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.840868 /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod(21): Reading nostruct-align/1zpdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23904/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod (nostruct-align/1zpdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.941877 /projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod(22): Reading nostruct-align/1d9tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod (nostruct-align/1d9tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.013868 /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod(22): Reading nostruct-align/1jzgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod (nostruct-align/1jzgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.374868 /projects/compbio/experiments/models.97/pdb/1g/1gwcA/nostruct-align/1gwcA.t2k-w0.5.mod(22): Reading nostruct-align/1gwcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gwcA/nostruct-align/1gwcA.t2k-w0.5.mod (nostruct-align/1gwcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gwcA/nostruct-align/1gwcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.420858 /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod(22): Reading nostruct-align/2hft.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29287/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod (nostruct-align/2hft.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.130873 /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod(21): Reading nostruct-align/1b2vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19416/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod (nostruct-align/1b2vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.357840 /projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod(22): Reading nostruct-align/1qh7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17462/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod (nostruct-align/1qh7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.745869 /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k-w0.5.mod(22): Reading nostruct-align/1iooA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-5529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k-w0.5.mod (nostruct-align/1iooA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.676880 /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod(22): Reading nostruct-align/1zto.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20869/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod (nostruct-align/1zto.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.255840 /projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod(22): Reading nostruct-align/3pflA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11988/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod (nostruct-align/3pflA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.916868 /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod(21): Reading nostruct-align/1lab.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod (nostruct-align/1lab.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.160828 /projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod(21): Reading nostruct-align/1ylvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod (nostruct-align/1ylvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.463831 /projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod(22): Reading nostruct-align/3kvt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15407/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod (nostruct-align/3kvt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.578886 /projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod(22): Reading nostruct-align/1ghqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19333/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod (nostruct-align/1ghqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.252850 /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod(21): Reading nostruct-align/1ivyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20544/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod (nostruct-align/1ivyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.774868 /projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod(21): Reading nostruct-align/1d2kA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-15707/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod (nostruct-align/1d2kA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.878843 /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod(22): Reading nostruct-align/1btkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod (nostruct-align/1btkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.846888 /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod(21): Reading nostruct-align/1btkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25467/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod (nostruct-align/1btkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.045834 /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod(21): Reading nostruct-align/2hgf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30438/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod (nostruct-align/2hgf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.729839 /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod(22): Reading nostruct-align/1lam.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12195/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod (nostruct-align/1lam.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.091858 /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod(21): Reading nostruct-align/1skf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23318/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod (nostruct-align/1skf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.758860 /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod(21): Reading nostruct-align/1dxy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27005/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod (nostruct-align/1dxy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.595848 /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod(22): Reading nostruct-align/1dlwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12818/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod (nostruct-align/1dlwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.702879 /projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod(21): Reading nostruct-align/1lap.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-22650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod (nostruct-align/1lap.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.320839 /projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod(21): Reading nostruct-align/1aisA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-18148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod (nostruct-align/1aisA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.230843 /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod(22): Reading nostruct-align/1aisB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-32701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod (nostruct-align/1aisB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.017883 /projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod(21): Reading nostruct-align/1e79A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-30540/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod (nostruct-align/1e79A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.280838 /projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod(22): Reading nostruct-align/1cy9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22891/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod (nostruct-align/1cy9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.588882 /projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod(21): Reading nostruct-align/1ihfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-11297/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod (nostruct-align/1ihfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.980844 /projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod(22): Reading nostruct-align/1ihfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22015/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod (nostruct-align/1ihfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.067860 /projects/compbio/experiments/models.97/pdb/1k/1kvnA/nostruct-align/1kvnA.t2k-w0.5.mod(22): Reading nostruct-align/1kvnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvnA/nostruct-align/1kvnA.t2k-w0.5.mod (nostruct-align/1kvnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvnA/nostruct-align/1kvnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.840837 /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod(22): Reading nostruct-align/1qh8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod (nostruct-align/1qh8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.480831 /projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod(22): Reading nostruct-align/1e79D.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29739/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod (nostruct-align/1e79D.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.603876 /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod(21): Reading nostruct-align/1lay.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod (nostruct-align/1lay.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.311872 /projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod(22): Reading nostruct-align/1jdlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21903/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod (nostruct-align/1jdlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.881838 /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod(21): Reading nostruct-align/1zug.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29385/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod (nostruct-align/1zug.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.775833 /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod(22): Reading nostruct-align/1qh8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-4820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod (nostruct-align/1qh8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.343885 /projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod(22): Reading nostruct-align/1e79G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod (nostruct-align/1e79G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.745846 /projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod(22): Reading nostruct-align/1e79H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17171/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod (nostruct-align/1e79H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.852837 /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod(22): Reading nostruct-align/1kb0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10307/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod (nostruct-align/1kb0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.123863 /projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod(22): Reading nostruct-align/1epfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23677/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod (nostruct-align/1epfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.419884 /projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod(21): Reading nostruct-align/1e79I.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-10357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod (nostruct-align/1e79I.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.563883 /projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod(21): Reading nostruct-align/1bmbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21322/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod (nostruct-align/1bmbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.896852 /projects/compbio/experiments/models.97/pdb/1j/1jkvA/nostruct-align/1jkvA.t2k-w0.5.mod(22): Reading nostruct-align/1jkvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30484/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkvA/nostruct-align/1jkvA.t2k-w0.5.mod (nostruct-align/1jkvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkvA/nostruct-align/1jkvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.835831 /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod(22): Reading nostruct-align/1lba.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4302/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod (nostruct-align/1lba.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.127878 /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod(21): Reading nostruct-align/1skz.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod (nostruct-align/1skz.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.091850 /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod(22): Reading nostruct-align/1hztA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28458/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod (nostruct-align/1hztA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.828888 /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod(21): Reading nostruct-align/1lbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19936/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod (nostruct-align/1lbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.811871 /projects/compbio/experiments/models.97/pdb/1g/1g5pA/nostruct-align/1g5pA.t2k-w0.5.mod(22): Reading nostruct-align/1g5pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5pA/nostruct-align/1g5pA.t2k-w0.5.mod (nostruct-align/1g5pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5pA/nostruct-align/1g5pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.395840 /projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod(22): Reading nostruct-align/1k4zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod (nostruct-align/1k4zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.475880 /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod(21): Reading nostruct-align/1dyr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2426/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod (nostruct-align/1dyr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.620886 /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod(21): Reading nostruct-align/2ligA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-32433/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod (nostruct-align/2ligA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.735863 /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod(22): Reading nostruct-align/1qumA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2224/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod (nostruct-align/1qumA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.186850 /projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod(21): Reading 1cr0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13715/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod (1cr0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.617836 /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod(21): Reading nostruct-align/1dlxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16939/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod (nostruct-align/1dlxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.172880 /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod(21): Reading nostruct-align/3dni.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21366/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod (nostruct-align/3dni.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.481846 /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod(22): Reading nostruct-align/1lkkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9166/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod (nostruct-align/1lkkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.640833 /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod(22): Reading nostruct-align/1lbu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32624/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod (nostruct-align/1lbu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.620852 /projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod(21): Reading nostruct-align/1ihgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22046/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod (nostruct-align/1ihgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.225887 /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod(21): Reading nostruct-align/1bg8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4026/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod (nostruct-align/1bg8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.838881 /projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod(22): Reading nostruct-align/1kvoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15378/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod (nostruct-align/1kvoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.777832 /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod(21): Reading nostruct-align/1fecA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27083/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod (nostruct-align/1fecA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.392832 /projects/compbio/experiments/models.97/pdb/1j/1jdmA/nostruct-align/1jdmA.t2k-w0.5.mod(22): Reading nostruct-align/1jdmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdmA/nostruct-align/1jdmA.t2k-w0.5.mod (nostruct-align/1jdmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdmA/nostruct-align/1jdmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.661880 /projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod(21): Reading nostruct-align/1f2aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-5402/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod (nostruct-align/1f2aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.233889 /projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod(22): Reading nostruct-align/1hskA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod (nostruct-align/1hskA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.132837 /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod(21): Reading nostruct-align/1lt3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod (nostruct-align/1lt3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.172831 /projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod(21): Reading nostruct-align/1qndA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18764/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod (nostruct-align/1qndA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.821835 /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod(22): Reading nostruct-align/1flmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod (nostruct-align/1flmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.730848 /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod(21): Reading nostruct-align/1sly.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30098/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod (nostruct-align/1sly.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.742872 /projects/compbio/experiments/models.97/pdb/1j/1j8uA/nostruct-align/1j8uA.t2k-w0.5.mod(22): Reading nostruct-align/1j8uA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23919/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8uA/nostruct-align/1j8uA.t2k-w0.5.mod (nostruct-align/1j8uA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8uA/nostruct-align/1j8uA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.134829 /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod(21): Reading nostruct-align/3csuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27201/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod (nostruct-align/3csuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.308884 /projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod(22): Reading nostruct-align/1ghsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod (nostruct-align/1ghsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.757854 /projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod(22): Reading nostruct-align/1ewqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod (nostruct-align/1ewqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.385866 /projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod(21): Reading nostruct-align/1g5qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod (nostruct-align/1g5qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.601851 /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod(22): Reading nostruct-align/1deoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26078/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod (nostruct-align/1deoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.362877 /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod(21): Reading nostruct-align/1d2mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod (nostruct-align/1d2mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.997837 /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod(21): Reading nostruct-align/1btmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-31725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod (nostruct-align/1btmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.580873 /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod(21): Reading nostruct-align/1lci.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15844/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod (nostruct-align/1lci.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.933865 /projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod(22): Reading nostruct-align/1qunB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod (nostruct-align/1qunB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.226831 /projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod(21): Reading nostruct-align/1e01A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-18642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod (nostruct-align/1e01A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.229849 /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod(21): Reading nostruct-align/1cr1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod (nostruct-align/1cr1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.095835 /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod(21): Reading nostruct-align/1lcl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19725/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod (nostruct-align/1lcl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.584871 /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod(22): Reading nostruct-align/1smd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-21526/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod (nostruct-align/1smd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.615852 /projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod(21): Reading nostruct-align/1dlyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4303/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod (nostruct-align/1dlyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.981861 /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod(21): Reading nostruct-align/1zwa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod (nostruct-align/1zwa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.745872 /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod(21): Reading nostruct-align/1a81A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1631/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod (nostruct-align/1a81A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.330828 /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod(21): Reading nostruct-align/1lct.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31928/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod (nostruct-align/1lct.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.873869 /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod(21): Reading nostruct-align/1le4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod (nostruct-align/1le4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.135885 /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod(21): Reading nostruct-align/1b47A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod (nostruct-align/1b47A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.546831 /projects/compbio/experiments/models.97/pdb/1h/1hslA/nostruct-align/1hslA.t2k-w0.5.mod(22): Reading nostruct-align/1hslA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-32118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hslA/nostruct-align/1hslA.t2k-w0.5.mod (nostruct-align/1hslA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hslA/nostruct-align/1hslA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.522829 /projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod(21): Reading nostruct-align/1gajA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-30361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod (nostruct-align/1gajA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.639877 /projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod(22): Reading nostruct-align/1iq0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11134/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod (nostruct-align/1iq0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.862850 /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod(22): Reading nostruct-align/1bmdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6349/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod (nostruct-align/1bmdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.990864 /projects/compbio/experiments/models.97/pdb/1j/1jm6A/nostruct-align/1jm6A.t2k-w0.5.mod(22): Reading nostruct-align/1jm6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20033/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm6A/nostruct-align/1jm6A.t2k-w0.5.mod (nostruct-align/1jm6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jm6A/nostruct-align/1jm6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.628883 /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod(22): Reading nostruct-align/2mtaC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod (nostruct-align/2mtaC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.804869 /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod(22): Reading nostruct-align/1jkxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5583/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod (nostruct-align/1jkxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.790844 /projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod(22): Reading nostruct-align/1g5rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19143/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod (nostruct-align/1g5rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.801847 /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod(21): Reading nostruct-align/1pyiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod (nostruct-align/1pyiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.837852 /projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod(22): Reading nostruct-align/1ldg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod (nostruct-align/1ldg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.012836 /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod(21): Reading nostruct-align/1d2nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20067/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod (nostruct-align/1d2nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.708851 /projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod(22): Reading nostruct-align/1hf8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5255/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod (nostruct-align/1hf8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.820873 /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod(21): Reading nostruct-align/1snc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21649/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod (nostruct-align/1snc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.690870 /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod(21): Reading nostruct-align/1ldl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2256/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod (nostruct-align/1ldl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.587851 /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod(21): Reading nostruct-align/1ytbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod (nostruct-align/1ytbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.287855 /projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod(21): Reading nostruct-align/1ytbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-4563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod (nostruct-align/1ytbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.454872 /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod(21): Reading nostruct-align/1qa1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3617/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod (nostruct-align/1qa1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.465860 /projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod(21): Reading nostruct-align/1hlcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-29294/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod (nostruct-align/1hlcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.448837 /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod(21): Reading nostruct-align/1ldr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-6142/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod (nostruct-align/1ldr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.543875 /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod(21): Reading nostruct-align/1ak4C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod (nostruct-align/1ak4C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.602867 /projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod(22): Reading nostruct-align/1i5gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20619/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod (nostruct-align/1i5gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.304880 /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod(21): Reading nostruct-align/2aaa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-5337/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod (nostruct-align/2aaa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.745869 /projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod(21): Reading nostruct-align/1sp1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29552/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod (nostruct-align/1sp1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.537884 /projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod(22): Reading nostruct-align/1gakA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29642/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod (nostruct-align/1gakA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.978868 /projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod(21): Reading nostruct-align/1sp2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod (nostruct-align/1sp2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.671883 /projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod(22): Reading nostruct-align/1floA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27643/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod (nostruct-align/1floA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.400850 /projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod(21): Reading nostruct-align/1f9mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9670/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod (nostruct-align/1f9mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.956833 /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod(21): Reading nostruct-align/1lea.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod (nostruct-align/1lea.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.713852 /projects/compbio/experiments/models.97/pdb/1j/1jm7A/nostruct-align/1jm7A.t2k-w0.5.mod(22): Reading nostruct-align/1jm7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm7A/nostruct-align/1jm7A.t2k-w0.5.mod (nostruct-align/1jm7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jm7A/nostruct-align/1jm7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.375883 /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod(21): Reading nostruct-align/1zxq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9037/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod (nostruct-align/1zxq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.285870 /projects/compbio/experiments/models.97/pdb/1j/1jm7B/nostruct-align/1jm7B.t2k-w0.5.mod(22): Reading nostruct-align/1jm7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3609/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm7B/nostruct-align/1jm7B.t2k-w0.5.mod (nostruct-align/1jm7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jm7B/nostruct-align/1jm7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.431868 /projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod(22): Reading nostruct-align/1j8wB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3138/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod (nostruct-align/1j8wB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.919863 /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod(21): Reading nostruct-align/1led.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-26610/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod (nostruct-align/1led.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.132874 /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod(21): Reading nostruct-align/1axiB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22691/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod (nostruct-align/1axiB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.213839 /projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod(21): Reading nostruct-align/1ewsA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-4814/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod (nostruct-align/1ewsA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.370850 /projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod(22): Reading nostruct-align/1g71A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20572/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod (nostruct-align/1g71A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.609859 /projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod(22): Reading nostruct-align/1d2oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26828/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod (nostruct-align/1d2oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.542841 /projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod(21): Reading nostruct-align/1hf9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod (nostruct-align/1hf9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.123829 /projects/compbio/experiments/models.97/pdb/1l/1lddA/nostruct-align/1lddA.t2k-w0.5.mod(22): Reading nostruct-align/1lddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-26848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lddA/nostruct-align/1lddA.t2k-w0.5.mod (nostruct-align/1lddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lddA/nostruct-align/1lddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.520864 /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod(22): Reading nostruct-align/1qupA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19856/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod (nostruct-align/1qupA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.729855 /projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod(21): Reading nostruct-align/1abmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-32267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod (nostruct-align/1abmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.008854 /projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod(21): Reading nostruct-align/1fsyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-22968/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod (nostruct-align/1fsyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.111879 /projects/compbio/experiments/models.97/pdb/1j/1jsbA/nostruct-align/1jsbA.t2k-w0.5.mod(22): Reading nostruct-align/1jsbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsbA/nostruct-align/1jsbA.t2k-w0.5.mod (nostruct-align/1jsbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsbA/nostruct-align/1jsbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.864849 /projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod(22): Reading nostruct-align/1ec5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod (nostruct-align/1ec5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.659878 /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod(22): Reading nostruct-align/2fcbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3487/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod (nostruct-align/2fcbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.108862 /projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod(21): Reading nostruct-align/2aat.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16983/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod (nostruct-align/2aat.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.797855 /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod(22): Reading nostruct-align/1onrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18628/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod (nostruct-align/1onrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.221886 /projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod(21): Reading nostruct-align/1sol.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16976/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod (nostruct-align/1sol.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.422831 /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod(22): Reading nostruct-align/1ihjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21965/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod (nostruct-align/1ihjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.388861 /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod(21): Reading nostruct-align/1xikA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod (nostruct-align/1xikA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.490871 /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod(22): Reading nostruct-align/1mgtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26311/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod (nostruct-align/1mgtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.465868 /projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod(22): Reading nostruct-align/1jdpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19309/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod (nostruct-align/1jdpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.766844 /projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod(21): Reading nostruct-align/1dtdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15587/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod (nostruct-align/1dtdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.032846 /projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod(21): Reading nostruct-align/1f2dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19056/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod (nostruct-align/1f2dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.038885 /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod(22): Reading nostruct-align/1dtdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod (nostruct-align/1dtdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.647888 /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod(21): Reading nostruct-align/2abd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29012/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod (nostruct-align/2abd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.450846 /projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod(21): Reading nostruct-align/1a6uL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod (nostruct-align/1a6uL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.178886 /projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod(21): Reading nostruct-align/1bmfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12927/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod (nostruct-align/1bmfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.050835 /projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod(21): Reading nostruct-align/8pchA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-7892/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod (nostruct-align/8pchA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.782833 /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod(22): Reading nostruct-align/1lfb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12767/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod (nostruct-align/1lfb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.240843 /projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod(22): Reading nostruct-align/1hzxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15819/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod (nostruct-align/1hzxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -28.161860 /projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod(21): Reading nostruct-align/1lfc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod (nostruct-align/1lfc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.207836 /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod(21): Reading nostruct-align/1bmfG.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32743/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod (nostruct-align/1bmfG.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.469854 /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod(21): Reading nostruct-align/2abk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod (nostruct-align/2abk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.792831 /projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod(22): Reading nostruct-align/1ey2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3563/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod (nostruct-align/1ey2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.105846 /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod(22): Reading nostruct-align/1g5tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12197/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod (nostruct-align/1g5tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.802845 /projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod(22): Reading nostruct-align/1g72A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18906/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod (nostruct-align/1g72A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.609850 /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod(21): Reading nostruct-align/4hb1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7039/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod (nostruct-align/4hb1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.738852 /projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod(21): Reading nostruct-align/1viwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13285/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod (nostruct-align/1viwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.003828 /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod(22): Reading nostruct-align/1derA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32141/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod (nostruct-align/1derA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.594854 /projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod(22): Reading nostruct-align/1g72B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24148/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod (nostruct-align/1g72B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.656874 /projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod(21): Reading nostruct-align/3znf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-28167/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod (nostruct-align/3znf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.461885 /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod(21): Reading nostruct-align/1spa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-528/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod (nostruct-align/1spa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.677864 /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod(22): Reading nostruct-align/1quqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21924/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod (nostruct-align/1quqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.195862 /projects/compbio/experiments/models.97/pdb/1j/1jscA/nostruct-align/1jscA.t2k-w0.5.mod(22): Reading nostruct-align/1jscA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3709/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jscA/nostruct-align/1jscA.t2k-w0.5.mod (nostruct-align/1jscA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jscA/nostruct-align/1jscA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.439884 /projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod(22): Reading nostruct-align/1eaxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod (nostruct-align/1eaxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.226864 /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod(22): Reading nostruct-align/1quqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9550/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod (nostruct-align/1quqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.946844 /projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod(21): Reading nostruct-align/1i5hW.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17826/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod (nostruct-align/1i5hW.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.893831 /projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod(22): Reading nostruct-align/1koiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25615/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod (nostruct-align/1koiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.833830 /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod(21): Reading nostruct-align/1spf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod (nostruct-align/1spf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.115871 /projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod(22): Reading nostruct-align/1lfo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-2062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod (nostruct-align/1lfo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.789885 /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod(21): Reading nostruct-align/1hleA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16908/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod (nostruct-align/1hleA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.077852 /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod(21): Reading nostruct-align/1hleB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26656/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod (nostruct-align/1hleB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.729858 /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod(21): Reading nostruct-align/1lh1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod (nostruct-align/1lh1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.835859 /projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod(21): Reading nostruct-align/1ihkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31592/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod (nostruct-align/1ihkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.589846 /projects/compbio/experiments/models.97/pdb/1j/1jdqA/nostruct-align/1jdqA.t2k-w0.5.mod(22): Reading nostruct-align/1jdqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-10537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdqA/nostruct-align/1jdqA.t2k-w0.5.mod (nostruct-align/1jdqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdqA/nostruct-align/1jdqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.549860 /projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod(21): Reading nostruct-align/1f2eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29721/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod (nostruct-align/1f2eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.571859 /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod(22): Reading nostruct-align/3seb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod (nostruct-align/3seb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.104881 /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod(21): Reading nostruct-align/2ovo.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod (nostruct-align/2ovo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.389881 /projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod(21): Reading nostruct-align/1kb5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod (nostruct-align/1kb5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.090885 /projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod(21): Reading nostruct-align/1iq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod (nostruct-align/1iq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.366837 /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod(21): Reading nostruct-align/1kb5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21214/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod (nostruct-align/1kb5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.267828 /projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod(22): Reading nostruct-align/1hzyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32602/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod (nostruct-align/1hzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.994862 /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod(21): Reading nostruct-align/1axkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14897/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod (nostruct-align/1axkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.124861 /projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod(22): Reading nostruct-align/1g73A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6315/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod (nostruct-align/1g73A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.475880 /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod(21): Reading nostruct-align/1sftA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-8413/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod (nostruct-align/1sftA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.101831 /projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod(22): Reading nostruct-align/1d2qA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17073/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod (nostruct-align/1d2qA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.774874 /projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod(21): Reading nostruct-align/1g73C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17607/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod (nostruct-align/1g73C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.074846 /projects/compbio/experiments/models.97/pdb/1l/1ldfA/nostruct-align/1ldfA.t2k-w0.5.mod(22): Reading nostruct-align/1ldfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-28914/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldfA/nostruct-align/1ldfA.t2k-w0.5.mod (nostruct-align/1ldfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldfA/nostruct-align/1ldfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.742838 /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod(21): Reading nostruct-align/1aboA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-18796/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod (nostruct-align/1aboA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.215851 /projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod(21): Reading nostruct-align/1fu9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5412/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod (nostruct-align/1fu9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.597845 /projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod(22): Reading nostruct-align/1l1dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod (nostruct-align/1l1dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.459852 /projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod(21): Reading nostruct-align/1ec7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod (nostruct-align/1ec7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.148857 /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod(22): Reading nostruct-align/1jsdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1406/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod (nostruct-align/1jsdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.670881 /projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod(21): Reading nostruct-align/1sqc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod (nostruct-align/1sqc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.751865 /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod(21): Reading nostruct-align/1cr5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod (nostruct-align/1cr5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.543839 /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod(22): Reading nostruct-align/1jsdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod (nostruct-align/1jsdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.690887 /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod(21): Reading nostruct-align/2acr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-17901/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod (nostruct-align/2acr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.354874 /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod(22): Reading nostruct-align/1eayC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod (nostruct-align/1eayC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.705841 /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod(21): Reading nostruct-align/2act.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-20852/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod (nostruct-align/2act.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.900845 /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod(21): Reading nostruct-align/1qa4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18903/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod (nostruct-align/1qa4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.711880 /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod(21): Reading nostruct-align/1lgr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod (nostruct-align/1lgr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.780888 /projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod(22): Reading nostruct-align/1h9dA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod (nostruct-align/1h9dA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.823833 /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod(22): Reading nostruct-align/2acy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod (nostruct-align/2acy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.314867 /projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod(22): Reading nostruct-align/1h9dB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod (nostruct-align/1h9dB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.358862 /projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod(21): Reading nostruct-align/1i5jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-10447/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod (nostruct-align/1i5jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.561848 /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod(21): Reading nostruct-align/1fehA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod (nostruct-align/1fehA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.353853 /projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod(21): Reading nostruct-align/1jdrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-4490/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod (nostruct-align/1jdrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.939827 /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod(21): Reading nostruct-align/2hmx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4022/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod (nostruct-align/2hmx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.252850 /projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod(21): Reading nostruct-align/1a6wH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod (nostruct-align/1a6wH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.018835 /projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod(21): Reading nostruct-align/1a6wL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod (nostruct-align/1a6wL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.126835 /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod(22): Reading nostruct-align/1iq4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod (nostruct-align/1iq4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.797855 /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod(21): Reading nostruct-align/1prcC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-430/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod (nostruct-align/1prcC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.443861 /projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod(21): Reading nostruct-align/1qniA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1692/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod (nostruct-align/1qniA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.849869 /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod(22): Reading nostruct-align/1ey4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8489/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod (nostruct-align/1ey4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.524858 /projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod(21): Reading nostruct-align/1g5vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-26943/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod (nostruct-align/1g5vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.786863 /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod(22): Reading nostruct-align/1pymA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5931/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod (nostruct-align/1pymA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.842861 /projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod(21): Reading nostruct-align/1d2rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-27751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod (nostruct-align/1d2rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.347862 /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod(21): Reading nostruct-align/1d2rB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14298/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod (nostruct-align/1d2rB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.346861 /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod(22): Reading nostruct-align/1sra.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod (nostruct-align/1sra.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.501879 /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod(22): Reading nostruct-align/1qusA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod (nostruct-align/1qusA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072847 /projects/compbio/experiments/models.97/pdb/1l/1l1eA/nostruct-align/1l1eA.t2k-w0.5.mod(22): Reading nostruct-align/1l1eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-31881/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1eA/nostruct-align/1l1eA.t2k-w0.5.mod (nostruct-align/1l1eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1eA/nostruct-align/1l1eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.833870 /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k-w0.5.mod(22): Reading nostruct-align/1eazA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20212/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k-w0.5.mod (nostruct-align/1eazA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.029865 /projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod(21): Reading nostruct-align/1srb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12811/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod (nostruct-align/1srb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.360859 /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod(21): Reading nostruct-align/2adr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22673/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod (nostruct-align/2adr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.016848 /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod(21): Reading nostruct-align/1cr6B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-25737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod (nostruct-align/1cr6B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.420828 /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod(22): Reading nostruct-align/1ytfB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16511/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod (nostruct-align/1ytfB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.804855 /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod(22): Reading nostruct-align/1ytfC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod (nostruct-align/1ytfC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.784861 /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod(21): Reading nostruct-align/1qa5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod (nostruct-align/1qa5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.711880 /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod(22): Reading nostruct-align/1ytfD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod (nostruct-align/1ytfD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.824833 /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod(22): Reading nostruct-align/1hlgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1742/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod (nostruct-align/1hlgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.327847 /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod(21): Reading nostruct-align/2adx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29057/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod (nostruct-align/2adx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.942833 /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod(21): Reading nostruct-align/1aizA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-7199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod (nostruct-align/1aizA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.381851 /projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod(21): Reading nostruct-align/1h9eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-26956/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod (nostruct-align/1h9eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.974869 /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod(21): Reading nostruct-align/2hnp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-23515/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod (nostruct-align/2hnp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.197830 /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod(21): Reading nostruct-align/2af8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25700/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod (nostruct-align/2af8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.215872 /projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod(21): Reading nostruct-align/1ihmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-180278/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod (nostruct-align/1ihmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.381851 /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod(21): Reading nostruct-align/1sro.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod (nostruct-align/1sro.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.718845 /projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod(22): Reading nostruct-align/1i5kC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25569/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod (nostruct-align/1i5kC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.718842 /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod(21): Reading nostruct-align/1dtgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-22529/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod (nostruct-align/1dtgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.022852 /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod(21): Reading nostruct-align/2aviA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod (nostruct-align/2aviA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.379839 /projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod(22): Reading nostruct-align/1aqcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18668/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod (nostruct-align/1aqcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.089872 /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod(21): Reading nostruct-align/2hp8.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6058/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod (nostruct-align/2hp8.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.954828 /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod(22): Reading nostruct-align/1iq5B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30546/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod (nostruct-align/1iq5B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.616858 /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod(21): Reading nostruct-align/1qnjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod (nostruct-align/1qnjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.363832 /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod(21): Reading nostruct-align/1lid.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod (nostruct-align/1lid.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.496864 /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod(22): Reading nostruct-align/1gj7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3004/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod (nostruct-align/1gj7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.711866 /projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod(22): Reading nostruct-align/1khbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9424/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod (nostruct-align/1khbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.705858 /projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod(21): Reading nostruct-align/1ewwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod (nostruct-align/1ewwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.710857 /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod(21): Reading nostruct-align/1dg3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23865/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod (nostruct-align/1dg3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.142832 /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod(21): Reading nostruct-align/1deuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-9457/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod (nostruct-align/1deuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.311842 /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod(22): Reading nostruct-align/1d2sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod (nostruct-align/1d2sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.949888 /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod(22): Reading nostruct-align/1xxaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod (nostruct-align/1xxaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.411888 /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod(21): Reading nostruct-align/1qa6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod (nostruct-align/1qa6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.540865 /projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod(21): Reading nostruct-align/1h9fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-26530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod (nostruct-align/1h9fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.406887 /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod(21): Reading nostruct-align/1lis.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20879/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod (nostruct-align/1lis.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.134838 /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod(21): Reading nostruct-align/1lit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-30420/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod (nostruct-align/1lit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.830879 /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod(22): Reading nostruct-align/1e6bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5646/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod (nostruct-align/1e6bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.883844 /projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod(22): Reading nostruct-align/1ihnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30334/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod (nostruct-align/1ihnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.132843 /projects/compbio/experiments/models.97/pdb/1m/1m4vA/nostruct-align/1m4vA.t2k-w0.5.mod(22): Reading nostruct-align/1m4vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9746/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1m4vA/nostruct-align/1m4vA.t2k-w0.5.mod (nostruct-align/1m4vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1m4vA/nostruct-align/1m4vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.426859 /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod(21): Reading nostruct-align/1sso.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1239/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod (nostruct-align/1sso.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.298887 /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod(21): Reading nostruct-align/2dynA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-29389/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod (nostruct-align/2dynA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.209877 /projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod(22): Reading nostruct-align/1jf2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1035/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod (nostruct-align/1jf2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.062881 /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod(22): Reading nostruct-align/1preA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21885/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod (nostruct-align/1preA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.492878 /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod(21): Reading nostruct-align/1preB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-23200/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod (nostruct-align/1preB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.473858 /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod(21): Reading nostruct-align/1epnE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod (nostruct-align/1epnE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.185856 /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod(22): Reading nostruct-align/1umuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod (nostruct-align/1umuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.051836 /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod(22): Reading nostruct-align/1umuB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18370/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod (nostruct-align/1umuB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.148853 /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod(22): Reading nostruct-align/1cipA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1913/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod (nostruct-align/1cipA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.078875 /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod(22): Reading nostruct-align/1khcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod (nostruct-align/1khcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.293863 /projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod(21): Reading nostruct-align/1ewxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod (nostruct-align/1ewxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.916853 /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod(22): Reading nostruct-align/1devB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5527/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod (nostruct-align/1devB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.628864 /projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod(22): Reading nostruct-align/1d2tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26823/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod (nostruct-align/1d2tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.470858 /projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod(21): Reading nostruct-align/1xxbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4586/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod (nostruct-align/1xxbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.083849 /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod(21): Reading nostruct-align/1devC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-16271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod (nostruct-align/1devC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.028870 /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod(21): Reading nostruct-align/1quuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9486/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod (nostruct-align/1quuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -29.985853 /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod(21): Reading nostruct-align/1abrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3999/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod (nostruct-align/1abrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.269854 /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod(21): Reading nostruct-align/1abrB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-1584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod (nostruct-align/1abrB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.621876 /projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod(21): Reading nostruct-align/1cr8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26158/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod (nostruct-align/1cr8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.519873 /projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod(21): Reading nostruct-align/1cpzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-26877/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod (nostruct-align/1cpzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.156847 /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod(21): Reading nostruct-align/1std.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod (nostruct-align/1std.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.469873 /projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod(22): Reading nostruct-align/1qa7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25622/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod (nostruct-align/1qa7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.460882 /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod(22): Reading nostruct-align/1qa7B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23620/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod (nostruct-align/1qa7B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.300888 /projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod(22): Reading nostruct-align/3sxlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-1183/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod (nostruct-align/3sxlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.086866 /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod(21): Reading nostruct-align/1ll1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod (nostruct-align/1ll1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.797873 /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod(21): Reading nostruct-align/1a88A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20708/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod (nostruct-align/1a88A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.117851 /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod(22): Reading nostruct-align/1e6cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10032/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod (nostruct-align/1e6cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.699850 /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod(22): Reading nostruct-align/1fltV.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod (nostruct-align/1fltV.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.117870 /projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod(22): Reading nostruct-align/1ihoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25772/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod (nostruct-align/1ihoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.269880 /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod(22): Reading nostruct-align/1fltX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20361/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod (nostruct-align/1fltX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.971867 /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod(21): Reading nostruct-align/1qgbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15697/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod (nostruct-align/1qgbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.047886 /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod(21): Reading nostruct-align/1fltY.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod (nostruct-align/1fltY.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.827835 /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k-w0.5.mod(22): Reading nostruct-align/1jf3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1019/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k-w0.5.mod (nostruct-align/1jf3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.002888 /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod(21): Reading nostruct-align/1hssA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27510/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod (nostruct-align/1hssA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.404850 /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod(21): Reading nostruct-align/7rsa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-29203/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod (nostruct-align/7rsa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.481853 /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod(22): Reading nostruct-align/1eaf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22950/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod (nostruct-align/1eaf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.263878 /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod(21): Reading nostruct-align/1stu.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod (nostruct-align/1stu.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.830864 /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod(21): Reading nostruct-align/2mev1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-9465/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod (nostruct-align/2mev1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.539886 /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod(21): Reading nostruct-align/2mev2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod (nostruct-align/2mev2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.662880 /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod(21): Reading nostruct-align/2mev4.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-22912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod (nostruct-align/2mev4.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.015837 /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod(21): Reading nostruct-align/1sty.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-5327/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod (nostruct-align/1sty.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.542837 /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod(21): Reading nostruct-align/2wrpR.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-5071/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod (nostruct-align/2wrpR.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.694838 /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod(21): Reading nostruct-align/1eal.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-966/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod (nostruct-align/1eal.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.765877 /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod(22): Reading nostruct-align/3sil.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28912/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod (nostruct-align/3sil.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.760883 /projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod(22): Reading nostruct-align/1g5yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6374/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod (nostruct-align/1g5yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.950861 /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod(21): Reading nostruct-align/1xxcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-3244/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod (nostruct-align/1xxcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.089874 /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod(22): Reading nostruct-align/1lki.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6140/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod (nostruct-align/1lki.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.925880 /projects/compbio/experiments/models.97/pdb/1l/1ldjA/nostruct-align/1ldjA.t2k-w0.5.mod(22): Reading nostruct-align/1ldjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-4495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldjA/nostruct-align/1ldjA.t2k-w0.5.mod (nostruct-align/1ldjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldjA/nostruct-align/1ldjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.045881 /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod(21): Reading nostruct-align/1quvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod (nostruct-align/1quvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.787830 /projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod(21): Reading nostruct-align/1ad1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod (nostruct-align/1ad1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.081827 /projects/compbio/experiments/models.97/pdb/1l/1ldjB/nostruct-align/1ldjB.t2k-w0.5.mod(22): Reading nostruct-align/1ldjB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-5654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldjB/nostruct-align/1ldjB.t2k-w0.5.mod (nostruct-align/1ldjB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldjB/nostruct-align/1ldjB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.970829 /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod(21): Reading nostruct-align/2hqi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20677/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod (nostruct-align/2hqi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.149887 /projects/compbio/experiments/models.97/pdb/1k/1konA/nostruct-align/1konA.t2k-w0.5.mod(22): Reading nostruct-align/1konA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1konA/nostruct-align/1konA.t2k-w0.5.mod (nostruct-align/1konA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1konA/nostruct-align/1konA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.703888 /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod(22): Reading nostruct-align/1lktA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod (nostruct-align/1lktA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.453876 /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k-w0.5.mod(22): Reading nostruct-align/1l8rA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27002/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k-w0.5.mod (nostruct-align/1l8rA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.022882 /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod(21): Reading nostruct-align/3dapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod (nostruct-align/3dapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.744888 /projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod(22): Reading nostruct-align/1i5nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod (nostruct-align/1i5nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.585875 /projects/compbio/experiments/models.97/pdb/1j/1jf4A/nostruct-align/1jf4A.t2k-w0.5.mod(22): Reading nostruct-align/1jf4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9379/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf4A/nostruct-align/1jf4A.t2k-w0.5.mod (nostruct-align/1jf4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jf4A/nostruct-align/1jf4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.138876 /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod(21): Reading nostruct-align/1sup.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19093/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod (nostruct-align/1sup.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.257887 /projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod(22): Reading nostruct-align/1dtjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1886/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod (nostruct-align/1dtjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.035833 /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod(21): Reading nostruct-align/1ovaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-26535/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod (nostruct-align/1ovaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.982876 /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod(22): Reading nostruct-align/1sur.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12380/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod (nostruct-align/1sur.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.522873 /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod(22): Reading nostruct-align/1hstA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8299/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod (nostruct-align/1hstA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.577864 /projects/compbio/experiments/models.97/pdb/1g/1gc0A/nostruct-align/1gc0A.t2k-w0.5.mod(22): Reading nostruct-align/1gc0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-30499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc0A/nostruct-align/1gc0A.t2k-w0.5.mod (nostruct-align/1gc0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gc0A/nostruct-align/1gc0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.310873 /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod(21): Reading nostruct-align/1garA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1520/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod (nostruct-align/1garA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.541838 /projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod(21): Reading nostruct-align/1sut.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3267/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod (nostruct-align/1sut.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.213854 /projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod(21): Reading nostruct-align/1prgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-32705/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod (nostruct-align/1prgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.631884 /projects/compbio/experiments/models.97/pdb/1i/1iq8A/nostruct-align/1iq8A.t2k-w0.5.mod(22): Reading nostruct-align/1iq8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25654/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq8A/nostruct-align/1iq8A.t2k-w0.5.mod (nostruct-align/1iq8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iq8A/nostruct-align/1iq8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.076847 /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod(21): Reading nostruct-align/1bmlC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-3594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod (nostruct-align/1bmlC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.363836 /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod(22): Reading nostruct-align/1lla.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20806/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod (nostruct-align/1lla.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.029875 /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k-w0.5.mod(22): Reading nostruct-align/1k5cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2766/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k-w0.5.mod (nostruct-align/1k5cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.941860 /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod(22): Reading nostruct-align/1dg6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18953/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod (nostruct-align/1dg6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.380829 /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod(22): Reading nostruct-align/1d2vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod (nostruct-align/1d2vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.299829 /projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod(21): Reading nostruct-align/1bv4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-8894/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod (nostruct-align/1bv4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.564846 /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod(22): Reading nostruct-align/1wfbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19240/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod (nostruct-align/1wfbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.519880 /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod(22): Reading nostruct-align/1svb.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod (nostruct-align/1svb.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.641861 /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod(22): Reading nostruct-align/1d2vC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12917/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod (nostruct-align/1d2vC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.037836 /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod(22): Reading nostruct-align/1gpeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod (nostruct-align/1gpeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.081852 /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod(21): Reading nostruct-align/1qa9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod (nostruct-align/1qa9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.638870 /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod(21): Reading nostruct-align/1llp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-18594/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod (nostruct-align/1llp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.273829 /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod(21): Reading nostruct-align/1dmaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21871/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod (nostruct-align/1dmaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.782845 /projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod(22): Reading nostruct-align/830cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod (nostruct-align/830cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.551853 /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod(21): Reading nostruct-align/1eca.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-31856/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod (nostruct-align/1eca.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.756853 /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod(22): Reading nostruct-align/1b3aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31538/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod (nostruct-align/1b3aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.888855 /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod(21): Reading nostruct-align/1svq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5008/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod (nostruct-align/1svq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.962831 /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod(21): Reading nostruct-align/1svr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-20290/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod (nostruct-align/1svr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.962831 /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod(21): Reading nostruct-align/1ecd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod (nostruct-align/1ecd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.756853 /projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod(22): Reading nostruct-align/1hu3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30329/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod (nostruct-align/1hu3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.514853 /projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod(21): Reading nostruct-align/1qnnA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22323/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod (nostruct-align/1qnnA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.988878 /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod(22): Reading nostruct-align/1svy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21175/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod (nostruct-align/1svy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.141851 /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod(21): Reading nostruct-align/1gc1G.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-29000/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod (nostruct-align/1gc1G.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.913832 /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod(21): Reading nostruct-align/1gc1H.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-1038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod (nostruct-align/1gc1H.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.733831 /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod(21): Reading nostruct-align/1ecl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21230/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod (nostruct-align/1ecl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.683832 /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod(22): Reading nostruct-align/1rl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5051/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod (nostruct-align/1rl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.143881 /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod(21): Reading nostruct-align/1eco.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27257/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod (nostruct-align/1eco.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.727831 /projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod(22): Reading nostruct-align/1k5dB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4534/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod (nostruct-align/1k5dB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.630838 /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod(22): Reading nostruct-align/1ad3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-18577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod (nostruct-align/1ad3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.101858 /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod(22): Reading nostruct-align/1lml.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod (nostruct-align/1lml.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.163839 /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod(21): Reading nostruct-align/3tmkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13573/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod (nostruct-align/3tmkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.460840 /projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod(21): Reading nostruct-align/1kopA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-27785/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod (nostruct-align/1kopA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.366844 /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod(21): Reading nostruct-align/1lmq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29050/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod (nostruct-align/1lmq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.366880 /projects/compbio/experiments/models.97/pdb/1h/1hllA/nostruct-align/1hllA.t2k-w0.5.mod(22): Reading nostruct-align/1hllA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-19344/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hllA/nostruct-align/1hllA.t2k-w0.5.mod (nostruct-align/1hllA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hllA/nostruct-align/1hllA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.661837 /projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod(22): Reading nostruct-align/1h9jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15650/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod (nostruct-align/1h9jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.046875 /projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod(22): Reading nostruct-align/1jztA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27703/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod (nostruct-align/1jztA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.865843 /projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod(22): Reading nostruct-align/1e6fA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod (nostruct-align/1e6fA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.922873 /projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod(22): Reading nostruct-align/1ihrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31176/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod (nostruct-align/1ihrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.529839 /projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod(22): Reading nostruct-align/1i5pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28921/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod (nostruct-align/1i5pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.959866 /projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod(21): Reading nostruct-align/1f2lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27579/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod (nostruct-align/1f2lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.778870 /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod(21): Reading nostruct-align/2cgpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod (nostruct-align/2cgpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.816853 /projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod(21): Reading nostruct-align/1cbjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32061/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod (nostruct-align/1cbjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.874887 /projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod(22): Reading nostruct-align/1hu4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6836/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod (nostruct-align/1hu4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.702831 /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod(22): Reading nostruct-align/1qgeE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod (nostruct-align/1qgeE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.596859 /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod(21): Reading nostruct-align/1ede.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25623/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod (nostruct-align/1ede.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.859838 /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod(21): Reading nostruct-align/1gatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-8636/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod (nostruct-align/1gatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.273876 /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod(22): Reading nostruct-align/1edg.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod (nostruct-align/1edg.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.592876 /projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod(21): Reading nostruct-align/1qnoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod (nostruct-align/1qnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.705864 /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod(22): Reading nostruct-align/1f9vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23553/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod (nostruct-align/1f9vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.051846 /projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod(22): Reading nostruct-align/1edn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15225/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod (nostruct-align/1edn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod . Average NLL-Simple NULL score: -15.761854 /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod(21): Reading nostruct-align/1pysA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4942/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod (nostruct-align/1pysA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.820845 /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod(21): Reading nostruct-align/1pysB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-29603/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod (nostruct-align/1pysB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.032841 /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod(21): Reading nostruct-align/1lnh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-4080/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod (nostruct-align/1lnh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.954838 /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod(22): Reading nostruct-align/2lisA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1551/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod (nostruct-align/2lisA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.134838 /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod(21): Reading nostruct-align/1edt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod (nostruct-align/1edt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.514853 /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod(22): Reading nostruct-align/1a12A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2737/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod (nostruct-align/1a12A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.995867 /projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod(21): Reading nostruct-align/1koqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20459/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod (nostruct-align/1koqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.764875 /projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod(21): Reading nostruct-align/1h2aL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-17112/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod (nostruct-align/1h2aL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.639881 /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod(21): Reading nostruct-align/1sxl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-30152/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod (nostruct-align/1sxl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.052883 /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod(21): Reading nostruct-align/1bfeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod (nostruct-align/1bfeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.277830 /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod(21): Reading nostruct-align/2hts.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3264/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod (nostruct-align/2hts.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.634884 /projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod(22): Reading nostruct-align/1vxrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23332/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod (nostruct-align/1vxrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.313868 /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod(21): Reading nostruct-align/1h2aS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-23052/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod (nostruct-align/1h2aS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.501888 /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod(21): Reading nostruct-align/3lck.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-31971/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod (nostruct-align/3lck.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.109873 /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod(22): Reading nostruct-align/1pytA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod (nostruct-align/1pytA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.230844 /projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod(22): Reading nostruct-align/1khhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14701/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod (nostruct-align/1khhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.808874 /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod(21): Reading nostruct-align/1dg9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1368/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod (nostruct-align/1dg9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.013849 /projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod(21): Reading nostruct-align/1loi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27880/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod (nostruct-align/1loi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.251879 /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod(21): Reading nostruct-align/1mvpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-19103/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod (nostruct-align/1mvpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.928886 /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod(21): Reading nostruct-align/1abwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4281/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod (nostruct-align/1abwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.647873 /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod(22): Reading nostruct-align/1l1lA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod (nostruct-align/1l1lA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.617849 /projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod(22): Reading nostruct-align/1korA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod (nostruct-align/1korA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.996843 /projects/compbio/experiments/models.97/pdb/1l/1lkxA/nostruct-align/1lkxA.t2k-w0.5.mod(22): Reading nostruct-align/1lkxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25883/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkxA/nostruct-align/1lkxA.t2k-w0.5.mod (nostruct-align/1lkxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkxA/nostruct-align/1lkxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.292830 /projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod(21): Reading nostruct-align/1eijA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3954/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod (nostruct-align/1eijA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.955854 /projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod(22): Reading nostruct-align/1ij2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3508/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod (nostruct-align/1ij2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.857876 /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod(22): Reading nostruct-align/1fepA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22769/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod (nostruct-align/1fepA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.016842 /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod(21): Reading nostruct-align/1lox.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-566/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod (nostruct-align/1lox.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.184832 /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod(21): Reading nostruct-align/3ldh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-5724/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod (nostruct-align/3ldh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.887882 /projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod(21): Reading nostruct-align/1f2nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26069/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod (nostruct-align/1f2nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.796839 /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod(22): Reading nostruct-align/1jf8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod (nostruct-align/1jf8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.636885 /projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod(22): Reading nostruct-align/1ts3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11317/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod (nostruct-align/1ts3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.371855 /projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod(22): Reading nostruct-align/1fn8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27542/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod (nostruct-align/1fn8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.156858 /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod(21): Reading nostruct-align/1efm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3517/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod (nostruct-align/1efm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.156839 /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod(21): Reading nostruct-align/1lpe.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20296/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod (nostruct-align/1lpe.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.917831 /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod(22): Reading nostruct-align/1d2zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30559/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod (nostruct-align/1d2zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.900869 /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod(22): Reading nostruct-align/1d2zB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod (nostruct-align/1d2zB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.957876 /projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod(22): Reading nostruct-align/1jsmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23029/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod (nostruct-align/1jsmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.605831 /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod(21): Reading nostruct-align/2alp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod (nostruct-align/2alp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.109859 /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod(21): Reading nostruct-align/1eh2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18235/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod (nostruct-align/1eh2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.657875 /projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod(21): Reading nostruct-align/1ebaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11947/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod (nostruct-align/1ebaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.740875 /projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod(22): Reading nostruct-align/1jsmB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11153/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod (nostruct-align/1jsmB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.580849 /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod(21): Reading nostruct-align/1iakA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15357/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod (nostruct-align/1iakA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.425880 /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod(22): Reading nostruct-align/1gpiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod (nostruct-align/1gpiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.802868 /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod(21): Reading nostruct-align/1iakB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-22644/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod (nostruct-align/1iakB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.761854 /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k-w0.5.mod(22): Reading nostruct-align/1kq1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30492/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k-w0.5.mod (nostruct-align/1kq1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.590883 /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod(21): Reading nostruct-align/2hvm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9481/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod (nostruct-align/2hvm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.181829 /projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod(21): Reading nostruct-align/1hloA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-16386/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod (nostruct-align/1hloA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.229841 /projects/compbio/experiments/models.97/pdb/1l/1lkyA/nostruct-align/1lkyA.t2k-w0.5.mod(22): Reading nostruct-align/1lkyA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22905/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkyA/nostruct-align/1lkyA.t2k-w0.5.mod (nostruct-align/1lkyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkyA/nostruct-align/1lkyA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.698881 /projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod(21): Reading nostruct-align/1h9mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-13831/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod (nostruct-align/1h9mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.314842 /projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod(21): Reading nostruct-align/1eikA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod (nostruct-align/1eikA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.603888 /projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod(22): Reading nostruct-align/1ihuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4581/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod (nostruct-align/1ihuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.871847 /projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod(22): Reading nostruct-align/1e6iA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13428/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod (nostruct-align/1e6iA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.091858 /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod(21): Reading nostruct-align/3rubS.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-27427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod (nostruct-align/3rubS.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.937832 /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod(22): Reading nostruct-align/1i71A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod (nostruct-align/1i71A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.597836 /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod(21): Reading nostruct-align/1qghA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13830/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod (nostruct-align/1qghA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.954861 /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod(21): Reading nostruct-align/1b3eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24648/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod (nostruct-align/1b3eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.991880 /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod(21): Reading nostruct-align/1dtoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16641/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod (nostruct-align/1dtoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.521879 /projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod(22): Reading nostruct-align/1jf9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15131/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod (nostruct-align/1jf9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.185852 /projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod(22): Reading nostruct-align/1nddA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11394/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod (nostruct-align/1nddA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.384846 /projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod(22): Reading nostruct-align/1gc5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod (nostruct-align/1gc5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.476845 /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod(21): Reading nostruct-align/1szt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28752/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod (nostruct-align/1szt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.093847 /projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod(22): Reading nostruct-align/1epuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod (nostruct-align/1epuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.095884 /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod(21): Reading nostruct-align/1egf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod (nostruct-align/1egf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.096876 /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod(21): Reading nostruct-align/1nddD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10671/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod (nostruct-align/1nddD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.413832 /projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod(21): Reading nostruct-align/1bmqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-32756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod (nostruct-align/1bmqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.595842 /projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod(22): Reading nostruct-align/1bmqB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10647/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod (nostruct-align/1bmqB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.038889 /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod(22): Reading nostruct-align/1fn9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12499/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod (nostruct-align/1fn9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.041870 /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod(22): Reading nostruct-align/1qnrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9201/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod (nostruct-align/1qnrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.601833 /projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod(22): Reading nostruct-align/1j9bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17878/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod (nostruct-align/1j9bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.586874 /projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod(21): Reading nostruct-align/1lqc.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28747/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod (nostruct-align/1lqc.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.387854 /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod(22): Reading nostruct-align/1rl6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31983/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod (nostruct-align/1rl6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.493834 /projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod(21): Reading nostruct-align/1az3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31252/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod (nostruct-align/1az3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.143885 /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod(21): Reading nostruct-align/1ego.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-6350/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod (nostruct-align/1ego.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.826883 /projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod(22): Reading nostruct-align/1k5hA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22447/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod (nostruct-align/1k5hA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.539873 /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod(21): Reading nostruct-align/1egr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod (nostruct-align/1egr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.826883 /projects/compbio/experiments/models.97/pdb/1e/1ebbA/nostruct-align/1ebbA.t2k-w0.5.mod(22): Reading nostruct-align/1ebbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-19150/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebbA/nostruct-align/1ebbA.t2k-w0.5.mod (nostruct-align/1ebbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebbA/nostruct-align/1ebbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.255838 /projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod(22): Reading nostruct-align/1l1nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13337/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod (nostruct-align/1l1nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.675848 /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod(21): Reading nostruct-align/1a15A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-736/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod (nostruct-align/1a15A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.121843 /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod(21): Reading nostruct-align/2thiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20141/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod (nostruct-align/2thiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.567829 /projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod(22): Reading nostruct-align/1gpjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21840/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod (nostruct-align/1gpjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.914854 /projects/compbio/experiments/models.97/pdb/1l/1lkzA/nostruct-align/1lkzA.t2k-w0.5.mod(22): Reading nostruct-align/1lkzA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-23123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkzA/nostruct-align/1lkzA.t2k-w0.5.mod (nostruct-align/1lkzA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lkzA/nostruct-align/1lkzA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.308836 /projects/compbio/experiments/models.97/pdb/1l/1lm8B/nostruct-align/1lm8B.t2k-w0.5.mod(22): Reading nostruct-align/1lm8B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30658/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lm8B/nostruct-align/1lm8B.t2k-w0.5.mod (nostruct-align/1lm8B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lm8B/nostruct-align/1lm8B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.133873 /projects/compbio/experiments/models.97/pdb/1l/1lm8C/nostruct-align/1lm8C.t2k-w0.5.mod(22): Reading nostruct-align/1lm8C.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30600/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lm8C/nostruct-align/1lm8C.t2k-w0.5.mod (nostruct-align/1lm8C.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lm8C/nostruct-align/1lm8C.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.554861 /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod(21): Reading nostruct-align/1ihvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16537/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod (nostruct-align/1ihvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.419888 /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod(22): Reading nostruct-align/1qgiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32154/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod (nostruct-align/1qgiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.715881 /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod(21): Reading nostruct-align/5znf.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-12802/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod (nostruct-align/5znf.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.386850 /projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod(21): Reading nostruct-align/1gaxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-7848/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod (nostruct-align/1gaxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.986885 /projects/compbio/experiments/models.97/pdb/1j/1jzxK/nostruct-align/1jzxK.t2k-w0.5.mod(22): Reading nostruct-align/1jzxK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-24714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jzxK/nostruct-align/1jzxK.t2k-w0.5.mod (nostruct-align/1jzxK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jzxK/nostruct-align/1jzxK.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.497843 /projects/compbio/experiments/models.97/pdb/1j/1jzxM/nostruct-align/1jzxM.t2k-w0.5.mod(22): Reading nostruct-align/1jzxM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5121/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jzxM/nostruct-align/1jzxM.t2k-w0.5.mod (nostruct-align/1jzxM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jzxM/nostruct-align/1jzxM.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.044851 /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod(21): Reading nostruct-align/9rnt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-3929/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod (nostruct-align/9rnt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.844845 /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod(22): Reading nostruct-align/1f9zA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8384/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod (nostruct-align/1f9zA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.685865 /projects/compbio/experiments/models.97/pdb/1c/1cixA/nostruct-align/1cixA.t2k-w0.5.mod(22): Reading nostruct-align/1cixA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-18429/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cixA/nostruct-align/1cixA.t2k-w0.5.mod (nostruct-align/1cixA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cixA/nostruct-align/1cixA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.534880 /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod(21): Reading nostruct-align/1lre.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-21900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod (nostruct-align/1lre.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.307888 /projects/compbio/experiments/models.97/pdb/1l/1lm8V/nostruct-align/1lm8V.t2k-w0.5.mod(22): Reading nostruct-align/1lm8V.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-32216/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lm8V/nostruct-align/1lm8V.t2k-w0.5.mod (nostruct-align/1lm8V.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lm8V/nostruct-align/1lm8V.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.107862 /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod(21): Reading nostruct-align/1ehs.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23992/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod (nostruct-align/1ehs.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.738880 /projects/compbio/experiments/models.97/pdb/1l/1l1oC/nostruct-align/1l1oC.t2k-w0.5.mod(22): Reading nostruct-align/1l1oC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-32133/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1oC/nostruct-align/1l1oC.t2k-w0.5.mod (nostruct-align/1l1oC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1oC/nostruct-align/1l1oC.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.386841 /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod(22): Reading nostruct-align/1kq3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27180/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod (nostruct-align/1kq3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.759869 /projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod(21): Reading nostruct-align/2udpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-15228/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod (nostruct-align/2udpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.390862 /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod(21): Reading nostruct-align/2pac.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14824/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod (nostruct-align/2pac.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.233862 /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod(22): Reading nostruct-align/1dmgA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8839/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod (nostruct-align/1dmgA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.899832 /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod(21): Reading nostruct-align/1h9oA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12237/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod (nostruct-align/1h9oA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.772852 /projects/compbio/experiments/models.97/pdb/1l/1l8yA/nostruct-align/1l8yA.t2k-w0.5.mod(22): Reading nostruct-align/1l8yA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-2988/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l8yA/nostruct-align/1l8yA.t2k-w0.5.mod (nostruct-align/1l8yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l8yA/nostruct-align/1l8yA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.591850 /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod(22): Reading nostruct-align/1a7aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9360/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod (nostruct-align/1a7aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.401833 /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod(22): Reading nostruct-align/1lrv.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3751/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod (nostruct-align/1lrv.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.889868 /projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod(21): Reading nostruct-align/1qgjA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-372/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod (nostruct-align/1qgjA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.207832 /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod(21): Reading nostruct-align/1eia.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-20682/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod (nostruct-align/1eia.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.568872 /projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod(22): Reading nostruct-align/1c6vX.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod (nostruct-align/1c6vX.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.384869 /projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod(21): Reading nostruct-align/1epwA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-9550/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod (nostruct-align/1epwA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.897881 /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod(22): Reading nostruct-align/1bo1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4390/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod (nostruct-align/1bo1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.074862 /projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod(21): Reading nostruct-align/1qntA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18070/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod (nostruct-align/1qntA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.654858 /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod(21): Reading nostruct-align/1ck7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-2358/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod (nostruct-align/1ck7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.160879 /projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod(21): Reading nostruct-align/1c6wA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod (nostruct-align/1c6wA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.681831 /projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod(22): Reading nostruct-align/1k5jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25941/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod (nostruct-align/1k5jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.945879 /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod(21): Reading nostruct-align/2aop.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21578/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod (nostruct-align/2aop.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.099888 /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod(21): Reading nostruct-align/1eit.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod (nostruct-align/1eit.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.491848 /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod(22): Reading nostruct-align/1ebdC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18604/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod (nostruct-align/1ebdC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.917830 /projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod(22): Reading nostruct-align/1kq4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod (nostruct-align/1kq4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.683830 /projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod(21): Reading nostruct-align/2fcpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-8423/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod (nostruct-align/2fcpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.929869 /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod(22): Reading nostruct-align/1dmhA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25017/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod (nostruct-align/1dmhA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.072876 /projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod(22): Reading nostruct-align/1hlrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26437/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod (nostruct-align/1hlrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.560865 /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod(22): Reading nostruct-align/1lst.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17074/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod (nostruct-align/1lst.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.415842 /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod(21): Reading nostruct-align/1cxlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-30546/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod (nostruct-align/1cxlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.433868 /projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod(22): Reading nostruct-align/1i74A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-31369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod (nostruct-align/1i74A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.754858 /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod(21): Reading nostruct-align/1qgkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17055/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod (nostruct-align/1qgkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.361834 /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod(21): Reading nostruct-align/1dv0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5665/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod (nostruct-align/1dv0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.426863 /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod(22): Reading nostruct-align/1epxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18593/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod (nostruct-align/1epxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.342850 /projects/compbio/experiments/models.97/pdb/1i/1ipaA/nostruct-align/1ipaA.t2k-w0.5.mod(22): Reading nostruct-align/1ipaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29226/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipaA/nostruct-align/1ipaA.t2k-w0.5.mod (nostruct-align/1ipaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ipaA/nostruct-align/1ipaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.334839 /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod(22): Reading nostruct-align/1zbdB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-591/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod (nostruct-align/1zbdB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.528849 /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21): Reading nostruct-align/1bmtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod (nostruct-align/1bmtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.032835 /projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod(22): Reading nostruct-align/1j9eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14326/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod (nostruct-align/1j9eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.000835 /projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod(21): Reading nostruct-align/1g6aA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12367/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod (nostruct-align/1g6aA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.308847 /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod(22): Reading nostruct-align/1heiA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod (nostruct-align/1heiA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.249865 /projects/compbio/experiments/models.97/pdb/1j/1jsqA/nostruct-align/1jsqA.t2k-w0.5.mod(22): Reading nostruct-align/1jsqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-391/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsqA/nostruct-align/1jsqA.t2k-w0.5.mod (nostruct-align/1jsqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsqA/nostruct-align/1jsqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.573877 /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod(21): Reading nostruct-align/2apr.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29071/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod (nostruct-align/2apr.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.830872 /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod(21): Reading nostruct-align/1ltm.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14105/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod (nostruct-align/1ltm.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.270887 /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod(21): Reading nostruct-align/1gpmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17041/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod (nostruct-align/1gpmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.036873 /projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod(22): Reading nostruct-align/1kq5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-8419/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod (nostruct-align/1kq5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.446861 /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod(21): Reading nostruct-align/1a7cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20275/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod (nostruct-align/1a7cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.442852 /projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod(21): Reading nostruct-align/1e6mA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25507/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod (nostruct-align/1e6mA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.526829 /projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod(22): Reading nostruct-align/1feuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20991/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod (nostruct-align/1feuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.090855 /projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod(21): Reading nostruct-align/1dv1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25804/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod (nostruct-align/1dv1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.180845 /projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod(21): Reading nostruct-align/1f41A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-8305/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod (nostruct-align/1f41A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.550879 /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod(22): Reading nostruct-align/1molA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12159/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod (nostruct-align/1molA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.996872 /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod(21): Reading nostruct-align/3ssi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19756/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod (nostruct-align/3ssi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.206881 /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod(21): Reading nostruct-align/1ck9A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12063/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod (nostruct-align/1ck9A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.622845 /projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod(21): Reading nostruct-align/2pcy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20597/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod (nostruct-align/2pcy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.452864 /projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod(21): Reading nostruct-align/1exbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8094/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod (nostruct-align/1exbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.218876 /projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod(22): Reading nostruct-align/1fthA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25272/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod (nostruct-align/1fthA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.503881 /projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod(22): Reading nostruct-align/1ebfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11217/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod (nostruct-align/1ebfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.261881 /projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod(22): Reading nostruct-align/1jsrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14577/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod (nostruct-align/1jsrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.753853 /projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod(22): Reading nostruct-align/1iapA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3331/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod (nostruct-align/1iapA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.860884 /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod(21): Reading nostruct-align/2drpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24395/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod (nostruct-align/2drpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -27.492870 /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod(22): Reading nostruct-align/1bmv1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14519/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod (nostruct-align/1bmv1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.658844 /projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod(22): Reading nostruct-align/1hn2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5173/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod (nostruct-align/1hn2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.406853 /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod(21): Reading nostruct-align/2pdd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-4427/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod (nostruct-align/2pdd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.843872 /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod(22): Reading nostruct-align/1bmv2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-11969/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod (nostruct-align/1bmv2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.508854 /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod(21): Reading nostruct-align/2pde.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23104/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod (nostruct-align/2pde.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.843872 /projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod(22): Reading nostruct-align/1ij8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2931/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod (nostruct-align/1ij8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.414888 /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod(21): Reading nostruct-align/1ldtL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23618/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod (nostruct-align/1ldtL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.008884 /projects/compbio/experiments/models.97/pdb/1g/1gy6A/nostruct-align/1gy6A.t2k-w0.5.mod(22): Reading nostruct-align/1gy6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-32003/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gy6A/nostruct-align/1gy6A.t2k-w0.5.mod (nostruct-align/1gy6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gy6A/nostruct-align/1gy6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.018877 /projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod(21): Reading nostruct-align/1i76A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25345/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod (nostruct-align/1i76A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.226885 /projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod(21): Reading nostruct-align/1qgmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-13130/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod (nostruct-align/1qgmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.194853 /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod(21): Reading nostruct-align/1b3jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod (nostruct-align/1b3jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.957844 /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod(22): Reading nostruct-align/1kwaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2028/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod (nostruct-align/1kwaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.144840 /projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod(21): Reading nostruct-align/1mhcB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-31292/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod (nostruct-align/1mhcB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.982843 /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod(22): Reading nostruct-align/1dttA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-30963/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod (nostruct-align/1dttA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.639858 /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod(22): Reading nostruct-align/1f2tA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod (nostruct-align/1f2tA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.972872 /projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod(22): Reading nostruct-align/1f42A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28300/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod (nostruct-align/1f42A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.892855 /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod(21): Reading nostruct-align/1kwaB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-24199/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod (nostruct-align/1kwaB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.173843 /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod(21): Reading nostruct-align/1f2tB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28134/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod (nostruct-align/1f2tB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.039862 /projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod(21): Reading nostruct-align/1cd0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9610/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod (nostruct-align/1cd0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.922874 /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k-w0.5.mod(22): Reading nostruct-align/1kaeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11866/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k-w0.5.mod (nostruct-align/1kaeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.218864 /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod(21): Reading nostruct-align/2vhbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15125/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod (nostruct-align/2vhbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.467850 /projects/compbio/experiments/models.97/pdb/1i/1ipcA/nostruct-align/1ipcA.t2k-w0.5.mod(22): Reading nostruct-align/1ipcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-28793/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipcA/nostruct-align/1ipcA.t2k-w0.5.mod (nostruct-align/1ipcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ipcA/nostruct-align/1ipcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.422831 /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod(21): Reading nostruct-align/2vhbB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-5541/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod (nostruct-align/2vhbB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.645864 /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod(21): Reading nostruct-align/2pf1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18155/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod (nostruct-align/2pf1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.771873 /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod(22): Reading nostruct-align/1bo4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6545/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod (nostruct-align/1bo4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.563841 /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod(21): Reading nostruct-align/1bo4B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17295/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod (nostruct-align/1bo4B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.052855 /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod(22): Reading nostruct-align/1nksA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9382/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod (nostruct-align/1nksA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.211832 /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod(21): Reading nostruct-align/1ryp1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4620/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod (nostruct-align/1ryp1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.607851 /projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod(22): Reading nostruct-align/1dfaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1442/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod (nostruct-align/1dfaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.895845 /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod(22): Reading nostruct-align/1ryp2.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17301/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod (nostruct-align/1ryp2.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.548859 /projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod(22): Reading nostruct-align/1hekA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14354/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod (nostruct-align/1hekA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.601864 /projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod(21): Reading nostruct-align/1elt.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30787/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod (nostruct-align/1elt.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.956850 /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod(21): Reading nostruct-align/1lvk.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-18236/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod (nostruct-align/1lvk.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.831854 /projects/compbio/experiments/models.97/pdb/1l/1l1sA/nostruct-align/1l1sA.t2k-w0.5.mod(22): Reading nostruct-align/1l1sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15696/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1sA/nostruct-align/1l1sA.t2k-w0.5.mod (nostruct-align/1l1sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1l1sA/nostruct-align/1l1sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.315872 /projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod(22): Reading nostruct-align/1jssA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10548/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod (nostruct-align/1jssA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.731878 /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod(21): Reading nostruct-align/1lvl.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-24509/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod (nostruct-align/1lvl.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.499849 /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod(21): Reading nostruct-align/1cqeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-28232/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod (nostruct-align/1cqeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.176840 /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod(22): Reading nostruct-align/1xbrA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19495/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod (nostruct-align/1xbrA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.006870 /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod(21): Reading nostruct-align/2pec.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-10799/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod (nostruct-align/2pec.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.002865 /projects/compbio/experiments/models.97/pdb/1h/1hn3A/nostruct-align/1hn3A.t2k-w0.5.mod(22): Reading nostruct-align/1hn3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn3A/nostruct-align/1hn3A.t2k-w0.5.mod (nostruct-align/1hn3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hn3A/nostruct-align/1hn3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.700865 /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod(21): Reading nostruct-align/8prkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32151/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod (nostruct-align/8prkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.156849 /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod(21): Reading nostruct-align/3pga1.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-10062/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod (nostruct-align/3pga1.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.867838 /projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod(21): Reading nostruct-align/1h9sA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12626/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod (nostruct-align/1h9sA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.128878 /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod(21): Reading nostruct-align/8prkB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-4126/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod (nostruct-align/8prkB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.154840 /projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod(21): Reading nostruct-align/2at9.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6170/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod (nostruct-align/2at9.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.160847 /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k-w0.5.mod(22): Reading nostruct-align/1gy7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-694/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k-w0.5.mod (nostruct-align/1gy7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.206852 /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod(21): Reading nostruct-align/1t7pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-16451/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod (nostruct-align/1t7pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.933836 /projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod(21): Reading nostruct-align/1rypA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15581/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod (nostruct-align/1rypA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.124846 /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod(21): Reading nostruct-align/1bfmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod (nostruct-align/1bfmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.004833 /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod(22): Reading nostruct-align/1mhdA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-29038/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod (nostruct-align/1mhdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.376854 /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod(22): Reading nostruct-align/1rypB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27669/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod (nostruct-align/1rypB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.312889 /projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod(21): Reading nostruct-align/1fewA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16729/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod (nostruct-align/1fewA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.806860 /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod(21): Reading nostruct-align/1rypC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13665/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod (nostruct-align/1rypC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.116854 /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod(22): Reading nostruct-align/1ema.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30042/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod (nostruct-align/1ema.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.313868 /projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod(21): Reading nostruct-align/1f43A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28714/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod (nostruct-align/1f43A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.037863 /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod(21): Reading nostruct-align/1rypD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12880/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod (nostruct-align/1rypD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.404829 /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod(21): Reading nostruct-align/1rypE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-25118/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod (nostruct-align/1rypE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.438854 /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod(21): Reading nostruct-align/1cd1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1163/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod (nostruct-align/1cd1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.580845 /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod(21): Reading nostruct-align/1rypF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-341/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod (nostruct-align/1rypF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.006874 /projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod(22): Reading nostruct-align/1e6oH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1068/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod (nostruct-align/1e6oH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.809832 /projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod(21): Reading nostruct-align/1rypH.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22250/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod (nostruct-align/1rypH.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.636843 /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod(22): Reading nostruct-align/1kafA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9193/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod (nostruct-align/1kafA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.716835 /projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod(21): Reading nostruct-align/1rypI.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12024/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod (nostruct-align/1rypI.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.869884 /projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod(21): Reading nostruct-align/1rypJ.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30408/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod (nostruct-align/1rypJ.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.550877 /projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod(22): Reading nostruct-align/1e6oL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22720/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod (nostruct-align/1e6oL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.317852 /projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod(21): Reading nostruct-align/1rypK.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29196/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod (nostruct-align/1rypK.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.409857 /projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod(22): Reading nostruct-align/1rypL.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9584/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod (nostruct-align/1rypL.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.372869 /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod(21): Reading nostruct-align/1qp6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-15902/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod (nostruct-align/1qp6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.524841 /projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod(22): Reading nostruct-align/1qnxA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31206/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod (nostruct-align/1qnxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.463877 /projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod(22): Reading nostruct-align/1jljA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4100/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod (nostruct-align/1jljA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.552887 /projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod(21): Reading nostruct-align/2asi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9168/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod (nostruct-align/2asi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.619848 /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod(21): Reading nostruct-align/1emn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23523/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod (nostruct-align/1emn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.127844 /projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod(22): Reading nostruct-align/3fapB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1586/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod (nostruct-align/3fapB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.802868 /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod(21): Reading nostruct-align/1qvaA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10060/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod (nostruct-align/1qvaA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.240829 /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod(22): Reading nostruct-align/1iarB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod (nostruct-align/1iarB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.808838 /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod(22): Reading nostruct-align/1dmlA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13704/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod (nostruct-align/1dmlA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.079861 /projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod(22): Reading nostruct-align/1hn4A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5652/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod (nostruct-align/1hn4A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.662863 /projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod(22): Reading nostruct-align/1hlvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9717/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod (nostruct-align/1hlvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.385853 /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod(22): Reading nostruct-align/1dmlB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25588/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod (nostruct-align/1dmlB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.560871 /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod(22): Reading nostruct-align/1ek0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12504/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod (nostruct-align/1ek0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.022856 /projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod(21): Reading nostruct-align/1e6pA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29810/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod (nostruct-align/1e6pA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.416842 /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod(21): Reading nostruct-align/1cxpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31090/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod (nostruct-align/1cxpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.267857 /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod(22): Reading nostruct-align/1cxpC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-18006/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod (nostruct-align/1cxpC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.426853 /projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod(22): Reading nostruct-align/1i78A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24388/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod (nostruct-align/1i78A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.452845 /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod(22): Reading nostruct-align/1qgoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11184/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod (nostruct-align/1qgoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.041874 /projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod(21): Reading nostruct-align/1fexA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19961/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod (nostruct-align/1fexA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.431862 /projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod(21): Reading nostruct-align/1dtvA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1270/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod (nostruct-align/1dtvA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.761852 /projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod(22): Reading nostruct-align/1f2vA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod (nostruct-align/1f2vA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.427885 /projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod(22): Reading nostruct-align/1f44A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1260/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod (nostruct-align/1f44A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.109884 /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod(21): Reading nostruct-align/3ebx.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20930/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod (nostruct-align/3ebx.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.561869 /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod(21): Reading nostruct-align/1enh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-26769/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod (nostruct-align/1enh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.681829 /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod(21): Reading nostruct-align/1lxa.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod (nostruct-align/1lxa.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.048843 /projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod(21): Reading nostruct-align/1fmaD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod (nostruct-align/1fmaD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.625883 /projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod(21): Reading nostruct-align/1fmaE.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-674/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod (nostruct-align/1fmaE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.733875 /projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod(21): Reading nostruct-align/1eno.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-1049/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod (nostruct-align/1eno.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.449883 /projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod(21): Reading nostruct-align/1g6eA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9664/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod (nostruct-align/1g6eA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.343853 /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod(21): Reading nostruct-align/1enp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14222/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod (nostruct-align/1enp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.864849 /projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod(22): Reading nostruct-align/1dfcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1651/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod (nostruct-align/1dfcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.008852 /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod(22): Reading nostruct-align/1tyfA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18256/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod (nostruct-align/1tyfA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod . Average NLL-Simple NULL score: -26.238871 /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod(21): Reading nostruct-align/1qvbA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4939/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod (nostruct-align/1qvbA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.619854 /projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod(22): Reading nostruct-align/1ftkA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23889/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod (nostruct-align/1ftkA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.778889 /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod(21): Reading nostruct-align/1cd31.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20546/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod (nostruct-align/1cd31.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.942842 /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod(22): Reading nostruct-align/1ju3A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9479/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod (nostruct-align/1ju3A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.236851 /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod(21): Reading nostruct-align/1tac.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-7713/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod (nostruct-align/1tac.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.350840 /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod(22): Reading nostruct-align/1jsuC.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-452/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod (nostruct-align/1jsuC.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.237862 /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod(22): Reading nostruct-align/1eny.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18898/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod (nostruct-align/1eny.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.147848 /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod(21): Reading nostruct-align/1tag.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20834/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod (nostruct-align/1tag.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.791880 /projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod(21): Reading nostruct-align/1dmmA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-23876/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod (nostruct-align/1dmmA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.836845 /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod(22): Reading nostruct-align/2pgd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6690/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod (nostruct-align/2pgd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.617861 /projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod(21): Reading nostruct-align/1ek1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21221/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod (nostruct-align/1ek1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.593868 /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod(22): Reading nostruct-align/1cxqA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6872/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod (nostruct-align/1cxqA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.326834 /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod(21): Reading nostruct-align/2pgi.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-21215/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod (nostruct-align/2pgi.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.824829 /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod(22): Reading nostruct-align/1tl2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6259/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod (nostruct-align/1tl2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.580856 /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod(21): Reading nostruct-align/1tam.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-482/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod (nostruct-align/1tam.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.004852 /projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod(21): Reading nostruct-align/1qgpA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29477/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod (nostruct-align/1qgpA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.750834 /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod(22): Reading nostruct-align/1fg7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25760/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod (nostruct-align/1fg7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.754875 /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod(21): Reading nostruct-align/1tap.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31882/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod (nostruct-align/1tap.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.174889 /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod(21): Reading nostruct-align/1taq.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-17249/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod (nostruct-align/1taq.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.337849 /projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod(21): Reading nostruct-align/1dv5A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18740/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod (nostruct-align/1dv5A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.461885 /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod(21): Reading nostruct-align/1sw6A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-10204/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod (nostruct-align/1sw6A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod . Average NLL-Simple NULL score: -24.437878 /projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod(22): Reading nostruct-align/1dtwB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15443/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod (nostruct-align/1dtwB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.528885 /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod(21): Reading nostruct-align/1cbuA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-3827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod (nostruct-align/1cbuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.219868 /projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod(22): Reading nostruct-align/1f45B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12306/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod (nostruct-align/1f45B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.584873 /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod(21): Reading nostruct-align/1cd3B.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30856/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod (nostruct-align/1cd3B.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.936855 /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod(21): Reading nostruct-align/1prtA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9900/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod (nostruct-align/1prtA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.697838 /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod(21): Reading nostruct-align/1prtD.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29560/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod (nostruct-align/1prtD.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.459841 /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod(22): Reading nostruct-align/1qp8A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26096/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod (nostruct-align/1qp8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.680876 /projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod(21): Reading nostruct-align/1e6qM.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-16863/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod (nostruct-align/1e6qM.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.099831 /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod(21): Reading nostruct-align/1prtF.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-29369/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod (nostruct-align/1prtF.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.233870 /projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod(21): Reading nostruct-align/1j9jA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-28106/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod (nostruct-align/1j9jA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.934877 /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod(22): Reading nostruct-align/1d3bA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12657/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod (nostruct-align/1d3bA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.452858 /projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod(21): Reading nostruct-align/1qvcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30525/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod (nostruct-align/1qvcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.633883 /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod(22): Reading nostruct-align/1d3bB.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13123/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod (nostruct-align/1d3bB.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.184845 /projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod(22): Reading nostruct-align/1iatA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10945/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod (nostruct-align/1iatA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.346842 /projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod(21): Reading nostruct-align/1ic2A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-23355/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod (nostruct-align/1ic2A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod . Average NLL-Simple NULL score: -18.747864 /projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod(22): Reading nostruct-align/1gr0A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30530/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod (nostruct-align/1gr0A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.797861 /projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod(21): Reading nostruct-align/1tbd.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25723/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod (nostruct-align/1tbd.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.071878 /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod(22): Reading nostruct-align/1x11A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9815/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod (nostruct-align/1x11A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.979862 /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod(21): Reading nostruct-align/1lyp.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-11596/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod (nostruct-align/1lyp.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.728868 /projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod(21): Reading nostruct-align/2phh.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26797/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod (nostruct-align/2phh.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.715864 /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod(21): Reading nostruct-align/1tbn.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-5456/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod (nostruct-align/1tbn.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.184872 /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod(21): Reading nostruct-align/1b3nA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-19415/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod (nostruct-align/1b3nA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.393835 /projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod(22): Reading nostruct-align/1fezA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-909/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod (nostruct-align/1fezA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod . Average NLL-Simple NULL score: -21.202856 /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod(22): Reading nostruct-align/1f46A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19970/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod (nostruct-align/1f46A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.687889 /projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod(21): Reading nostruct-align/1ovoA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod (nostruct-align/1ovoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.426853 /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod(21): Reading nostruct-align/1fmcA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-26266/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod (nostruct-align/1fmcA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.649828 /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod(21): Reading nostruct-align/2phy.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19312/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod (nostruct-align/2phy.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.730837 /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod(22): Reading nostruct-align/1g6gA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30827/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod (nostruct-align/1g6gA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.395876 /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod(21): Reading nostruct-align/1dfeA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25874/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod (nostruct-align/1dfeA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod . Average NLL-Simple NULL score: -16.777863 /projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod(22): Reading nostruct-align/1d3cA.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28045/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod (nostruct-align/1d3cA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod . Average NLL-Simple NULL score: -23.957834 /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k-w0.5.mod(22): Reading nostruct-align/1lf7A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-4109/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k-w0.5.mod (nostruct-align/1lf7A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k-w0.5.mod . Average NLL-Simple NULL score: -19.690838 /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod(21): Reading nostruct-align/1eps.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2177/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod (nostruct-align/1eps.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.555855 /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod(22): Reading nostruct-align/1tca.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25860/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod (nostruct-align/1tca.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod . Average NLL-Simple NULL score: -22.097870 /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod(21): Reading nostruct-align/2pia.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30864/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod (nostruct-align/2pia.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod . Average NLL-Simple NULL score: -25.208839 /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod(22): Reading nostruct-align/2pii.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-14111/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod (nostruct-align/2pii.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.747849 /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod(21): Reading nostruct-align/1cz1A.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9820/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod (nostruct-align/1cz1A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod . Average NLL-Simple NULL score: -20.675884 /projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod(21): Reading nostruct-align/6hir.t2k-w0.5-db model number 1 from MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-741/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod (nostruct-align/6hir.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) % Subsequence-submodel (local) (SW = 2) % Simple scores adjusted by ln(seq len) (adjust_score = 2) % Single Track Model: /projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod . Average NLL-Simple NULL score: -17.660856 /projects/compbio/experiments/protein-predict/SAM_T02/scripts/strip_comments < T0136.template-lib.dist-rdb \ | /projects/compbio/experiments/protein-predict/SAM_T02/scripts/shorten_mod_names \ | /projects/compbio/bin/row SEQID eq T0136 \ | /projects/compbio/bin/sorttbl EVALUE \ > T0136.template-lib-sorted.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_template_scores < T0136.template-lib-sorted.rdb > T0136.template-lib-scores.rdb /projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136.template-lib-scores < T0136.template-lib-scores.rdb > T0136.template-lib-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Annotated template model scores" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.template-lib-scores.html \ T0136.template-lib-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Top Hits" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/casp5/scripts-human/best_scores -num 10 -E 1.e-05 T0136.t2k-w0.5-scores.rdb T0136.template-lib-scores.rdb T0136.t2k-100-30-dssp-ebghstl-scores.rdb T0136.t2k-100-30-stride-ebghtl-scores.rdb T0136.t2k-100-30-str-scores.rdb T0136.t2k-100-30-alpha-scores.rdb T0136.t2k-100-30-dssp_ehl2-scores.rdb > T0136.t2k.best-scores.rdb /projects/compbio/experiments/casp5/scripts-human/oneway_hits_rdb2html T0136.t2k.best_hits < T0136.t2k.best-scores.rdb > T0136.t2k.best-scores.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Best scoring hits from all models" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.best-scores.html \ T0136.t2k.best-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Alignments for Top Hits" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/bin/i686/modelfromalign T0136 \ -alignfile T0136.a2m \ -insert /projects/compbio/lib/fssp-trained.regularizer \ -aweight_bits 0.8\ -fimtrans -1\ -fimstrength 1\ -ins_jump_conf 1 \ -match_jump_conf 1 \ -del_jump_conf 1 \ -binary_output 1\ -prior_library /projects/compbio/lib/recode3.20comp \ -a2mdots 0 \ -a protein \ -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \ -aweight_method 1\ -aweight_exponent 10 Reading parameter file /projects/compbio/lib/fssp-trained.regularizer /projects/compbio/lib/fssp-trained.regularizer(1): Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP SAM: /projects/compbio/bin/i686/modelfromalign v3.3.2 (February, 2001) compiled 06/24/02_10:50:57 Reading alignment file T0136.a2m (1 sequence, 211 columns) as A2M alignment. /projects/compbio/experiments/casp5/scripts-human/get_t2k_lib_hits < T0136.t2k.best-scores.rdb > T0136.t2k.top_hits_t2k /projects/compbio/experiments/casp5/scripts-human/get_t2k_lib_hits -negate < T0136.t2k.best-scores.rdb > T0136.t2k.top_hits_non_t2k echo "Building pairwise alignments" Building pairwise alignments /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments /projects/compbio/experiments/casp5/t0136/t0136-80-290 \ T0136 T0136.t2k.dssp-ebghstl.mod T0136.t2k.stride-ebghtl.mod T0136.t2k.str.mod T0136.t2k-w0.5.mlib T0136.t2k-100-30-dssp-ebghstl.mlib T0136.t2k-100-30-stride-ebghtl.mlib T0136.t2k-100-30-str.mlib 6014 \ < T0136.t2k.top_hits_t2k @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.671570 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.201050 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.698860 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.066833 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.772247 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -132.384232 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.798073 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.429039 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.836884 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -137.550873 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.481140 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.330124 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.090691 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.288185 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.578217 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.743721 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.367699 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.134712 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.275726 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.511726 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.277710 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.293716 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-24536/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.671989 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-24536/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.263489 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.671570 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.201050 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.698860 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.066833 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.772247 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -132.384232 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.798073 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.429039 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.836884 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -137.550873 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.481140 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.330124 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.090691 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.288185 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.578217 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.743721 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.367699 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.134712 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.275726 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21): Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.511726 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.277710 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1ceo-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.293716 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/T0136-1ceo-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-24536/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.671989 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-24536/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.263489 Database has 2 sequences with 554 residues. @@@@ gzip -f 1ceo/1ceo-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hzdA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.331512 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.339035 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.618835 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.935341 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.727036 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.730026 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.401344 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.763351 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -139.965073 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -139.965561 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.156403 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.590927 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.102661 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.102669 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -103.392181 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -103.392174 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.177155 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.185677 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -107.779175 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -107.778191 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -181.237152 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -181.237152 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.331512 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.339035 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.618835 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.935341 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.727036 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -131.730026 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.401344 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.763351 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -139.965073 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -139.965561 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.156403 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.590927 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.102661 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.102669 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -103.392181 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -103.392174 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.177155 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.185677 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -107.779175 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22): Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -107.778191 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/1hzdA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -181.237152 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1hzdA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -181.237152 Database has 2 sequences with 483 residues. @@@@ gzip -f 1hzdA/T0136-1hzdA-simpleSW-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnoA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.632217 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.382736 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.748550 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.002060 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.746719 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.496231 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.511551 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.741562 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.544632 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.295639 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.858459 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.035461 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.231674 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -75.710648 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.546661 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.369690 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.878159 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.333664 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.147171 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.239166 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-10786/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.093002 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-10786/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.876495 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.632217 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.382736 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.748550 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.002060 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.746719 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.496231 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.511551 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -125.741562 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.544632 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.295639 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.858459 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.035461 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.231674 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -75.710648 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.546661 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.369690 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.878159 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.333664 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.147171 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1hnoA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.239166 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/T0136-1hnoA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-10786/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.093002 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-10786/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -120.876495 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnoA/1hnoA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1rpxA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.725784 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.725784 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -113.710243 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -113.710243 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.352203 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.352203 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.770653 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.770653 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.232697 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.232697 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.855644 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.855644 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.147537 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.147537 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.513550 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.513550 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.414017 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.414017 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.051544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.051544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.760544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.760544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-23779/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -53.527500 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-23779/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -53.527500 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.725784 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.725784 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -113.710243 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -113.710243 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.352203 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.352203 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.770653 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.770653 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.232697 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.232697 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.855644 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.855644 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.147537 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.147537 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.513550 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.513550 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.414017 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.414017 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.051544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22): Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.051544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.760544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1rpxA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.760544 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/T0136-1rpxA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-23779/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -53.527500 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-23779/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -53.527500 Database has 2 sequences with 441 residues. @@@@ gzip -f 1rpxA/1rpxA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1nzyA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.786301 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.786301 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.582603 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.582603 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.230080 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.230080 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.223335 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.223335 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.440369 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.440369 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.566154 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.566154 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -84.096718 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -84.096718 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.339714 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.339714 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.735725 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.735725 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -99.590233 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -99.590233 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.379700 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.379700 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-17734/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.636505 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-17734/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.636505 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.786301 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.786301 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.582603 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -112.582603 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.230080 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.230080 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.223335 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -117.223335 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.440369 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.440369 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.566154 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.566154 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -84.096718 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -84.096718 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.339714 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.339714 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.735725 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.735725 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -99.590233 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21): Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -99.590233 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.379700 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1nzyA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.379700 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/T0136-1nzyA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-17734/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.636505 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-17734/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.636505 Database has 2 sequences with 480 residues. @@@@ gzip -f 1nzyA/1nzyA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1dciA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.160034 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.160034 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.979340 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.979340 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.063873 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.063873 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.219208 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.219208 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.821396 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.821396 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.154205 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.154205 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.117691 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.117691 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -104.514175 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -104.514175 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.828690 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.828690 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -108.761673 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -108.761673 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -183.050674 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -183.050674 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-28040/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.073975 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-28040/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.073975 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.160034 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.160034 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.979340 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.979340 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.063873 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.063873 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.219208 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.219208 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.821396 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.821396 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.154205 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.154205 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.117691 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -90.117691 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -104.514175 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -104.514175 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.828690 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -93.828690 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -108.761673 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22): Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -108.761673 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -183.050674 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1dciA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -183.050674 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/T0136-1dciA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-28040/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.073975 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-28040/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -140.073975 Database has 2 sequences with 486 residues. @@@@ gzip -f 1dciA/1dciA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1j9yA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.929565 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.584595 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.436127 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.051170 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.947906 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.162933 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.669975 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.079453 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.307602 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.889633 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.266144 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.694176 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.379433 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.379456 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.578949 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.099442 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.189949 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.120453 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.168945 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.740463 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.038971 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.125443 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13933/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -80.725990 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13933/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -80.993492 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.929565 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.584595 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -118.436127 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.051170 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.947906 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -130.162933 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -121.669975 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.079453 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.307602 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.889633 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.266144 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.694176 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.379433 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.379456 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.578949 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -135.099442 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.189949 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.120453 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.168945 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22): Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -138.740463 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.038971 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1j9yA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.125443 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/T0136-1j9yA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13933/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -80.725990 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13933/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -80.993492 Database has 2 sequences with 596 residues. @@@@ gzip -f 1j9yA/1j9yA-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/2dubE @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.974625 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.049606 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -116.446312 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -116.123283 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.562103 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.520111 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.593796 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.041306 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.673065 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.669067 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.874756 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.443764 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.920799 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.920799 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -110.661301 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -110.599815 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.610802 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.488304 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.777786 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.725304 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.912827 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.837311 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.974625 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -124.049606 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -116.446312 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -116.123283 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.562103 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.520111 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.593796 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -119.041306 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.673065 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.669067 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.874756 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.443764 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.920799 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.920799 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -110.661301 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -110.599815 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.610802 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.488304 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.777786 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22): Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -115.725304 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/2dubE-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.912827 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-2dubE-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.837311 Database has 2 sequences with 472 residues. @@@@ gzip -f 2dubE/T0136-2dubE-simpleSW-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.713058 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.845566 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.228752 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.361252 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.484314 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.649811 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.991013 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.156502 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.026260 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.170258 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.333969 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.477936 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.397804 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.397797 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.149315 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.098305 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.432808 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.539307 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.957298 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.910286 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.797806 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.693298 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-32684/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.359985 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-fssp-global-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-32684/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.258987 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-fssp-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.713058 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.845566 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.228752 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -123.361252 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.484314 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.649811 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.991013 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -127.156502 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.026260 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.170258 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.333969 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.477936 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.397804 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -88.397797 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.149315 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.098305 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.432808 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -92.539307 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.957298 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21): Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -95.910286 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.797806 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1ef8A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.693298 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/T0136-1ef8A-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-32684/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.359985 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-fssp-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 0 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-bark-32684/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.258987 Database has 2 sequences with 472 residues. @@@@ gzip -f 1ef8A/1ef8A-T0136-fssp-global-adpstyle5.pw.a2m @@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnuA @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.241379 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.992386 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.537704 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.792191 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.155670 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.904694 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.061005 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.264496 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -142.036774 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.785767 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.506622 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.675598 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.647186 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.104179 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-vit-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.546661 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.369690 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.893677 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.360680 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-local-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.147171 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.239166 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-simpleSW-adpstyle1.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -129.241379 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-stride-ebghtl (T0136.t2k-100-30-stride-ebghtl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -128.992386 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.537704 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.2d -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-ebghtl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.stride-ebghtl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -122.792191 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.155670 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-dssp-ebghstl (T0136.t2k-100-30-dssp-ebghstl model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -133.904694 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.061005 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.dssp -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-ebghstl.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.dssp-ebghstl.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -126.264496 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -142.036774 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-100-30-str.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model T0136.t2k-100-30-str (T0136.t2k-100-30-str model number 1) T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -141.785767 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.506622 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw -alphabet protein,STR -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m,/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.str -dbsize 6014 -subtract_null 4 -select_align 8 SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -134.675598 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -87.286163 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.647186 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 5 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -76.104179 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-vit-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.546661 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Reading parameter file T0136.t2k-w0.5.mod T0136.t2k-w0.5.mod(22): Reading MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m Scoring model T0136.t2k-w0.5.mod (T0136.t2k-w0.5 model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -91.369690 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.893677 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Reading MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21): Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL -- Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1) Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -81.360680 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/1hnuA-T0136-local-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.147171 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-simpleSW-adpstyle5.pw.a2m @@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1hnuA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod -db /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -dbsize 6014 -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8 Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod(22): Reading MODEL -- Model from alignment file T0136.a2m SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 06/11/02_10:53:47 Scoring model /projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.mod WARNING: Reverse null model and E-value calculations are being made without model calibration. Use -calibrate first for better results. Calculating Distances (. = 1000 sequences) . Average NLL-Simple NULL score: -180.239166 Database has 2 sequences with 491 residues. @@@@ gzip -f 1hnuA/T0136-1hnuA-simpleSW-adpstyle5.pw.a2m /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments /projects/compbio/experiments/casp5/t0136/t0136-80-290 \ T0136 T0136.t2k-w0.5.mlib 6014 < T0136.t2k.top_hits_non_t2k echo "Template FSSP_rep" > T0136.t2k.top_hits_pwise_alignments.rdb echo "5S 5S" >> T0136.t2k.top_hits_pwise_alignments.rdb cat T0136.t2k.top_hits_t2k T0136.t2k.top_hits_non_t2k >> T0136.t2k.top_hits_pwise_alignments.rdb /projects/compbio/experiments/casp5/scripts-human/gather_best_align_scores 50 /projects/compbio/experiments/casp5/t0136/t0136-80-290 T0136 T0136.t2k.top_hits_pwise_alignments.rdb T0136.t2k.best-scores.rdb > T0136.t2k.predicted_alignments.rdb /projects/compbio/experiments/casp5/scripts-human/top_reported_alignments 5 T0136.t2k.predicted_alignments.rdb T0136.t2k.best-scores.rdb > T0136.t2k.top_reported_alignments.rdb Looking for 5 hits in T0136.t2k.best-scores.rdb, choosing alignments from T0136.t2k.predicted_alignments.rdb read 10 hits adding 1dciAadding 1rpxAadding 1ceoThere are 0..2 keys in rowsToPrint /projects/compbio/experiments/protein-predict/SAM_T02/scripts/format_casp_alignments 50 /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert /projects/compbio/experiments/casp5/t0136/t0136-80-290 T0136 0 < T0136.t2k.predicted_alignments.rdb > T0136.t2k.many_alignments.rdb Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hnuA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnuA/T0136-1hnuA-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hnuA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hnoA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnoA/T0136-1hnoA-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hnoA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hzdA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hzdA/T0136-1hzdA-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hzdA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hnuA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnuA/T0136-1hnuA-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hnuA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hnoA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hnoA/T0136-1hnoA-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hnoA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 2dubE Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/2dubE/T0136-2dubE-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 2dubE Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1hzdA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1hzdA/T0136-1hzdA-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1hzdA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 2dubE Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/2dubE/T0136-2dubE-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 2dubE Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ceo Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo/T0136-1ceo-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ceo Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1j9yA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1j9yA/T0136-1j9yA-2track-protein-STR-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1j9yA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ceo Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ceo Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1j9yA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1j9yA/T0136-1j9yA-2track-protein-STR-local-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1j9yA Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-EBGHSTL-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ef8A/T0136-1ef8A-2track-protein-EBGHTL-global-adpstyle1.pw.a2m.gz does not match template SEQRES record for pdb id 1ef8A Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. /projects/compbio/experiments/casp5/scripts-human/casp_summary_report_html \ T0136.t2k.predicted_alignments.rdb T0136.t2k.best-scores.rdb /projects/compbio/experiments/casp5/t0136/t0136-80-290 T0136 \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290 0 > T0136.t2k.many_alignments.html /projects/compbio/experiments/casp5/scripts-human/make_undertaker_alignment_list < T0136.t2k.many_alignments.rdb > T0136.t2k.undertaker-align.script /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "T02 Many Alignments Summary" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.many_alignments.html\ T0136.t2k.many_alignments.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/format_casp_alignments 5 /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert /projects/compbio/experiments/casp5/t0136/t0136-80-290 T0136 1 < T0136.t2k.top_reported_alignments.rdb > T0136.t2k.casp_top_reported_alignments.rdb Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. ln: `/projects/compbio/experiments/casp5/t0136/t0136-80-290/MODEL1.al': File exists Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. ln: `/projects/compbio/experiments/casp5/t0136/t0136-80-290/MODEL2.al': File exists Name "main::Score" used only once: possible typo at /projects/compbio/experiments/protein-predict/SAM_T02/casp_convert/a2m-to-caspal.perl line 275. Warning: template sequence in file /projects/compbio/experiments/casp5/t0136/t0136-80-290/1ceo/T0136-1ceo-2track-protein-STR-local-adpstyle5.pw.a2m.gz does not match template SEQRES record for pdb id 1ceo ln: `/projects/compbio/experiments/casp5/t0136/t0136-80-290/MODEL3.al': File exists /projects/compbio/experiments/casp5/scripts-human/casp_summary_report_html \ T0136.t2k.top_reported_alignments.rdb T0136.t2k.best-scores.rdb /projects/compbio/experiments/casp5/t0136/t0136-80-290 T0136 \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290 1 > T0136.t2k.top_reported_alignments.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "T02 Top Models Summary" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.top_reported_alignments.html\ T0136.t2k.top_reported_alignments.html >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \ "Undertaker (3d) files" >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Script for dssp coloring in rasmol" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.dssp-color.rasmol T0136.t2k.dssp-color.rasmol \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Script for stride coloring in rasmol" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.stride-color.rasmol T0136.t2k.stride-color.rasmol \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Script for str coloring in rasmol" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.str-color.rasmol T0136.t2k.str-color.rasmol \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Script for alpha coloring in rasmol" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.alpha-color.rasmol T0136.t2k.alpha-color.rasmol \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html make: *** No rule to make target `dssp_ehl2_color_script', needed by `rasmol_scripts'. /projects/compbio/bin/i686/hmmscore T0136.t2k-2track-undertaker \ -calibrate 1 \ -a protein,STR \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.str.mod \ -track_coeff 1.0,0.3 \ -sw 2 -adpstyle 5 \ -db T0136.t2k.a2m,T0136.t2k.str.seq \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.strs \ -select_score 8 -Emax 1.e-05 \ -select_align 4 SAM: /projects/compbio/bin/i686/hmmscore v3.3.2 (February, 2001) compiled 06/24/02_10:50:12 Creating calibrated model library T0136.t2k-2track-undertaker.mlib (calibrate = 1). Scoring model T0136.t2k-2track-undertaker T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb Calibrating to sequence database. gunzip: stdout: Broken pipe Warning: sequence file T0136.t2k.a2m longer than other tracks gunzip: stdout: Broken pipe Calculating Distances (. = 1000 sequences) Model T0136.t2k-2track-undertaker calibrated to tau=0.7212 and lambda=1.6848 . Average NLL-Simple NULL score: -23.306284 Database has 6517 sequences with 1546492 residues. /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Multiple alignment for undertaker templates" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k-2track-undertaker.a2m T0136.t2k-2track-undertaker.a2m >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "many alignments for undertaker templates" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.undertaker-align.script T0136.t2k.undertaker-align.script >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html make: *** No rule to make target `T0136.t2k.undertaker-align.pdb.gz', needed by `undertaker_show_alignment'. /projects/compbio/bin/i686/fragfinder T0136.t2k \ -a protein,STR \ -trackmod T0136.t2k-w0.5.mod,T0136.t2k.str.mod \ -track_coeff 1.0,0.3 \ -db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.strs \ -firstsequence T0136.a2m,- \ -fraglen 9 -numpermatch 6 SAM: /projects/compbio/bin/i686/fragfinder v3.3.2 (February, 2001) compiled no_date T0136.t2k-w0.5.mod(2593): Reading track 0 model from MODEL -- Model from alignment file /var/tmp/tmp-build-weighted-model-cc69-21622/tmp.a2m T0136.t2k.str.mod(1295): Reading track 1 model from MODEL -- Model from 2nd structure file T0136.t2k.str.rdb mkdir decoys /projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \ "Fragment list for undertaker (from fragfinder)" \ file:/projects/compbio/experiments/casp5/t0136/t0136-80-290/T0136.t2k.frag T0136.t2k.frag >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html /projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_summary_html \ >> /projects/compbio/experiments/casp5/t0136/t0136-80-290/summary.html make: Target `default' not remade because of errors.