PFRMAT SS
TARGET T0136
METHOD Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    6 (1 EBGHTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0136.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 282
METHOD
MODEL 1
V C 0.802
P C 0.669
A T 0.621
D T 0.643
G T 0.526
V E 0.725
V E 0.912
T E 0.928
G E 0.944
R E 0.940
G E 0.932
T E 0.933
I E 0.862
L T 0.721
G T 0.810
R E 0.606
P E 0.884
V E 0.964
H E 0.995
A E 0.995
A E 0.988
S E 0.953
Q E 0.605
D T 0.625
F T 0.683
T T 0.463
V E 0.498
M E 0.418
G E 0.300
G T 0.391
S C 0.403
A C 0.537
G C 0.723
E H 0.707
T H 0.892
Q H 0.971
S H 0.988
T H 0.994
K H 0.994
V H 0.996
V H 0.998
E H 0.999
T H 0.998
M H 0.996
E H 0.994
Q H 0.992
A H 0.984
L H 0.962
L H 0.871
T H 0.615
G C 0.903
T C 0.861
P C 0.793
F E 0.959
L E 0.994
F E 0.994
F E 0.979
Y E 0.879
D E 0.402
S T 0.563
G T 0.557
G T 0.549
A C 0.365
R C 0.450
I C 0.383
Q C 0.371
E H 0.766
G H 0.846
I H 0.914
D H 0.913
S H 0.907
L H 0.931
S H 0.924
G H 0.942
Y H 0.960
G H 0.984
K H 0.983
M H 0.989
F H 0.988
F H 0.988
A H 0.986
N H 0.974
V H 0.922
K H 0.881
L H 0.814
S H 0.359
G T 0.418
V C 0.507
V C 0.462
P C 0.587
Q E 0.925
I E 0.974
A E 0.978
I E 0.966
I E 0.850
A E 0.592
G T 0.578
P T 0.743
C T 0.802
A T 0.760
G T 0.462
G T 0.459
A E 0.357
S E 0.514
Y E 0.546
S E 0.422
P E 0.390
A T 0.352
L T 0.432
T T 0.510
D E 0.542
F E 0.919
I E 0.964
I E 0.971
M E 0.930
T E 0.642
K T 0.840
K T 0.903
A T 0.693
H E 0.685
M E 0.950
F E 0.963
I E 0.952
T E 0.752
G C 0.509
P H 0.757
Q H 0.841
V H 0.939
I H 0.952
K H 0.942
S H 0.881
V H 0.806
T H 0.707
G C 0.523
E C 0.467
D C 0.506
V C 0.508
T C 0.615
A H 0.427
D H 0.355
E H 0.361
L H 0.379
G C 0.593
G C 0.475
A H 0.633
E H 0.812
A H 0.868
H H 0.845
M H 0.892
A H 0.884
I H 0.902
S H 0.812
G C 0.750
N C 0.566
I E 0.451
H E 0.369
F E 0.424
V E 0.395
A C 0.358
E C 0.485
D C 0.523
D H 0.449
D H 0.779
A H 0.875
A H 0.953
E H 0.971
L H 0.978
I H 0.982
A H 0.989
K H 0.990
K H 0.985
L H 0.990
L H 0.975
S H 0.937
F H 0.869
L H 0.465
P T 0.380
Q T 0.408
N T 0.413
N T 0.391
T T 0.400
E C 0.513
E C 0.603
A C 0.749
S C 0.728
F C 0.592
V C 0.602
N C 0.499
P T 0.461
N C 0.493
N C 0.553
D C 0.568
V T 0.423
S T 0.412
P C 0.340
N H 0.539
T H 0.462
E H 0.411
L H 0.392
R G 0.309
D T 0.288
I C 0.294
V C 0.436
P C 0.375
I C 0.454
D T 0.754
G T 0.748
K T 0.630
K T 0.500
G C 0.711
Y C 0.974
END