PFRMAT SS
TARGET T0136
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0136.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 282
METHOD
MODEL 1
V C 0.998
P C 0.862
A C 0.478
D S 0.290
G C 0.380
V E 0.703
V E 0.885
T E 0.885
G E 0.934
R E 0.898
G E 0.896
T E 0.891
I E 0.805
L T 0.877
G T 0.940
R E 0.598
P E 0.833
V E 0.989
H E 0.998
A E 0.999
A E 0.999
S E 0.978
Q E 0.776
D C 0.572
F T 0.372
T T 0.280
V E 0.373
M E 0.337
G T 0.330
G T 0.282
S C 0.305
A C 0.328
G C 0.518
E H 0.893
T H 0.947
Q H 0.974
S H 0.985
T H 0.990
K H 0.993
V H 0.996
V H 0.997
E H 0.996
T H 0.997
M H 0.998
E H 0.996
Q H 0.996
A H 0.994
L H 0.979
L H 0.907
T T 0.533
G T 0.760
T C 0.828
P C 0.755
F E 0.861
L E 0.984
F E 0.997
F E 0.990
Y E 0.954
D E 0.609
S C 0.448
G S 0.402
G S 0.315
A C 0.478
R C 0.429
I C 0.376
Q C 0.366
E H 0.538
G H 0.658
I H 0.889
D H 0.901
S H 0.928
L H 0.919
S H 0.894
G H 0.866
Y H 0.973
G H 0.991
K H 0.995
M H 0.998
F H 0.997
F H 0.996
A H 0.994
N H 0.990
V H 0.976
K H 0.886
L H 0.637
S T 0.535
G S 0.348
V C 0.364
V C 0.440
P C 0.565
Q E 0.914
I E 0.976
A E 0.976
I E 0.964
I E 0.858
A E 0.486
G S 0.428
P S 0.390
C S 0.308
A C 0.275
G S 0.313
G T 0.301
A E 0.273
S E 0.477
Y E 0.649
S E 0.628
P E 0.493
A C 0.417
L T 0.292
T T 0.357
D C 0.254
F E 0.711
I E 0.885
I E 0.937
M E 0.895
T E 0.484
K T 0.705
K T 0.757
A C 0.706
H E 0.607
M E 0.958
F E 0.987
I E 0.971
T E 0.782
G C 0.615
P H 0.784
Q H 0.914
V H 0.951
I H 0.964
K H 0.919
S H 0.846
V H 0.794
T H 0.637
G T 0.400
E C 0.428
D C 0.540
V C 0.568
T C 0.768
A G 0.348
D G 0.380
E G 0.432
L H 0.270
G T 0.335
G C 0.390
A H 0.486
E H 0.823
A H 0.873
H H 0.863
M H 0.865
A H 0.852
I H 0.738
S T 0.617
G T 0.521
N C 0.683
I E 0.621
H E 0.726
F E 0.843
V E 0.834
A E 0.630
E C 0.530
D C 0.532
D C 0.345
D H 0.873
A H 0.919
A H 0.957
E H 0.978
L H 0.978
I H 0.976
A H 0.986
K H 0.991
K H 0.989
L H 0.987
L H 0.978
S H 0.896
F H 0.792
L H 0.577
P H 0.408
Q H 0.323
N H 0.259
N C 0.295
T C 0.374
E C 0.427
E C 0.562
A C 0.772
S C 0.750
F C 0.560
V C 0.516
N C 0.599
P C 0.528
N C 0.479
N C 0.573
D C 0.709
V C 0.488
S C 0.352
P C 0.585
N H 0.312
T H 0.277
E G 0.283
L H 0.306
R G 0.232
D C 0.307
I C 0.527
V C 0.543
P C 0.655
I C 0.439
D C 0.493
G T 0.427
K S 0.327
K S 0.462
G C 0.864
Y C 0.999
END