PFRMAT SS
TARGET T0136
AUTHOR 4069-6308-1312
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0136.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 90
METHOD
MODEL 1
V C 0.960
T C 0.638
G C 0.386
E C 0.578
D C 0.546
V C 0.466
T C 0.779
A H 0.454
D H 0.429
E G 0.504
L C 0.251
G T 0.540
G T 0.273
A H 0.422
E H 0.492
A H 0.441
H H 0.339
M E 0.240
A C 0.259
I C 0.243
S C 0.305
G E 0.355
N E 0.615
I E 0.834
H E 0.868
F E 0.913
V E 0.892
A E 0.589
E S 0.538
D S 0.618
D H 0.943
D H 0.993
A H 0.995
A H 0.998
E H 0.997
L H 0.996
I H 0.993
A H 0.995
K H 0.995
K H 0.993
L H 0.991
L H 0.976
S H 0.887
F H 0.799
L H 0.453
P C 0.393
Q T 0.331
N T 0.316
N C 0.451
T C 0.378
E C 0.417
E C 0.518
A C 0.732
S C 0.768
F C 0.592
V C 0.599
N C 0.728
P C 0.656
N C 0.447
N C 0.548
D C 0.610
V C 0.510
S C 0.433
P C 0.626
N H 0.380
T H 0.425
E H 0.454
L H 0.515
R H 0.361
D G 0.285
I C 0.337
V C 0.441
P C 0.610
I C 0.386
D C 0.437
G T 0.431
K S 0.347
K S 0.552
G C 0.681
Y C 0.585
D C 0.568
V H 0.928
R H 0.981
D H 0.988
V H 0.991
I H 0.986
A H 0.962
K H 0.937
I H 0.874
V H 0.488
D C 0.589
W T 0.402
G T 0.369
D H 0.435
Y H 0.625
L H 0.613
E H 0.631
V H 0.534
K H 0.436
A H 0.486
G H 0.400
Y H 0.324
A C 0.339
T C 0.399
N C 0.894
END